Csa6G104060 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa6G104060
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Nucleolar protein; contains IPR005554 (Nrap protein)
Location	Chr6 : 6792780 .. 6793705 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTAAAGGAGCTCAAAAGGTTGGCTGCTTATGCTAGAAGCAGCGCAGATTTGTTGACAAGACTAATGTTGCAGCATCAGGTCGATTCTTGTCTGTGGGAGGTAAGGAAGTATCCTAGAACCACGATTTGATCGTTTTATTTTCAGCTTTAGACGTGACAGTTCCTGAGAAACCCAACTTAAACTTCGTTCCGTTTGCAGTCCCTTTTCCGAACTCCATTGACGAACTATGACGCTGTTATTCTTCTCCATAGAGACAAATTACCTTACCCACAACGCCTTCTCTTCCCATCTGAACTTAACCAAGGTAACCTTCGTGAGCTGGCTAGTGACAGTCTTTCTCGATGTTCCCTTTTCGTATTTGTCGGAGCTTTTGATATTTGAATTTTAATCACAAGCATATTCTAGCAGGAACCCATGTCGCAAAAGGGAATCCTACCAAAATCTTCACTCCATTCTTATCTCCTAGAAACTTGAAAGCAAGTTCTGAAAACATCAAGGACAGACTTTTGGTAAATTTTGATCCATTAAGGTGTTATATCGAGGATCTGCAGGCAAGTAAAGTAACTCAGGATGCCTTGATATTTCATTTTTTTAATTGTCGATTTCATTGCTTACTCATTTTTATGAAAATGTAGAAAGAATTCTCCAACACTTTCAACTTATGGTATGACTCTTTGGGAGGTGATGCAATTGGTGTAACATGGGGACAACGCAGTTCTAAGGTAATATTTTACTGCCATTTGAAAACTTATCACCACAATTTAAACCAAATTCTTTACTCTCTCTTACAGAAGCGTGAACGTGACGACGAAGATGTGGCGGAAGAAAAAGAACCAGCTGAAGTGCTAAAATCTGCTGGTGAAACTGGTAAAGGTTTAATGAGGAGTATCTACCTACTCAAAGCTCCAAGGCTCACCACCTGA

mRNA sequence

ATGTTAAAGGAGCTCAAAAGGTTGGCTGCTTATGCTAGAAGCAGCGCAGATTTGTTGACAAGACTAATGTTGCAGCATCAGGTCGATTCTTGTCTGTGGGAGTCCCTTTTCCGAACTCCATTGACGAACTATGACGCTGTTATTCTTCTCCATAGAGACAAATTACCTTACCCACAACGCCTTCTCTTCCCATCTGAACTTAACCAAGGAACCCATGTCGCAAAAGGGAATCCTACCAAAATCTTCACTCCATTCTTATCTCCTAGAAACTTGAAAGCAAGTTCTGAAAACATCAAGGACAGACTTTTGGTAAATTTTGATCCATTAAGGTGTTATATCGAGGATCTGCAGAAAGAATTCTCCAACACTTTCAACTTATGGTATGACTCTTTGGGAGGTGATGCAATTGGTGTAACATGGGGACAACGCAGTTCTAAGAAGCGTGAACGTGACGACGAAGATGTGGCGGAAGAAAAAGAACCAGCTGAAGTGCTAAAATCTGCTGGTGAAACTGGTAAAGGTTTAATGAGGAGTATCTACCTACTCAAAGCTCCAAGGCTCACCACCTGA

Coding sequence (CDS)

ATGTTAAAGGAGCTCAAAAGGTTGGCTGCTTATGCTAGAAGCAGCGCAGATTTGTTGACAAGACTAATGTTGCAGCATCAGGTCGATTCTTGTCTGTGGGAGTCCCTTTTCCGAACTCCATTGACGAACTATGACGCTGTTATTCTTCTCCATAGAGACAAATTACCTTACCCACAACGCCTTCTCTTCCCATCTGAACTTAACCAAGGAACCCATGTCGCAAAAGGGAATCCTACCAAAATCTTCACTCCATTCTTATCTCCTAGAAACTTGAAAGCAAGTTCTGAAAACATCAAGGACAGACTTTTGGTAAATTTTGATCCATTAAGGTGTTATATCGAGGATCTGCAGAAAGAATTCTCCAACACTTTCAACTTATGGTATGACTCTTTGGGAGGTGATGCAATTGGTGTAACATGGGGACAACGCAGTTCTAAGAAGCGTGAACGTGACGACGAAGATGTGGCGGAAGAAAAAGAACCAGCTGAAGTGCTAAAATCTGCTGGTGAAACTGGTAAAGGTTTAATGAGGAGTATCTACCTACTCAAAGCTCCAAGGCTCACCACCTGA

Protein sequence

MLKELKRLAAYARSSADLLTRLMLQHQVDSCLWESLFRTPLTNYDAVILLHRDKLPYPQRLLFPSELNQGTHVAKGNPTKIFTPFLSPRNLKASSENIKDRLLVNFDPLRCYIEDLQKEFSNTFNLWYDSLGGDAIGVTWGQRSSKKRERDDEDVAEEKEPAEVLKSAGETGKGLMRSIYLLKAPRLTT*

Homology

[Close]

BLAST of Csa6G104060 vs. TrEMBL
Match: A0A0A0KAM4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G104060 PE=4 SV=1)

HSP 1 Score: 382.1 bits (980), Expect = 3.9e-103
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 1


Query: 1   MLKELKRLAAYARSSADLLTRLMLQHQVDSCLWESLFRTPLTNYDAVILLHRDKLPYPQR 60
           MLKELKRLAAYARSSADLLTRLMLQHQVDSCLWESLFRTPLTNYDAVILLHRDKLPYPQR
Sbjct: 1   MLKELKRLAAYARSSADLLTRLMLQHQVDSCLWESLFRTPLTNYDAVILLHRDKLPYPQR 60

Query: 61  LLFPSELNQGTHVAKGNPTKIFTPFLSPRNLKASSENIKDRLLVNFDPLRCYIEDLQKEF 120
           LLFPSELNQGTHVAKGNPTKIFTPFLSPRNLKASSENIKDRLLVNFDPLRCYIEDLQKEF
Sbjct: 61  LLFPSELNQGTHVAKGNPTKIFTPFLSPRNLKASSENIKDRLLVNFDPLRCYIEDLQKEF 120

Query: 121 SNTFNLWYDSLGGDAIGVTWGQRSSKKRERDDEDVAEEKEPAEVLKSAGETGKGLMRSIY 180
           SNTFNLWYDSLGGDAIGVTWGQRSSKKRERDDEDVAEEKEPAEVLKSAGETGKGLMRSIY
Sbjct: 121 SNTFNLWYDSLGGDAIGVTWGQRSSKKRERDDEDVAEEKEPAEVLKSAGETGKGLMRSIY 180

Query: 181 LLKAPRLTT 190
           LLKAPRLTT
Sbjct: 181 LLKAPRLTT 189

[Close]

BLAST of Csa6G104060 vs. TrEMBL
Match: E5GCN3_CUCME (Nucleolar RNA-associated protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 4.4e-86
Identity = 166/188 (88.30%), Postives = 170/188 (90.43%), Query Frame = 1


Query: 2   LKELKRLAAYARSSADLLTRLMLQHQVDSCLWESLFRTPLTNYDAVILLHRDKLPYPQRL 61
           + ELKRLAAYARSSADLLTRL+LQHQVDSCLWESLFRTPLTNYDAVILLHRDKLPYPQRL
Sbjct: 716 VSELKRLAAYARSSADLLTRLILQHQVDSCLWESLFRTPLTNYDAVILLHRDKLPYPQRL 775

Query: 62  LFPSELNQGTHVAKGNPTKIFTPFLSPRNLKASSENIKDRLLVNFDPLRCYIEDLQKEFS 121
           LFPSELNQGTHVAKGNP+KIFTPFLSPRNLKASS NIKDRLL              KEFS
Sbjct: 776 LFPSELNQGTHVAKGNPSKIFTPFLSPRNLKASSGNIKDRLL--------------KEFS 835

Query: 122 NTFNLWYDSLGGDAIGVTWGQRSSKKRERDDEDVAEEKEPAEVLKSAGETGKGLMRSIYL 181
           NTFNLWYDSLGGDAIGVTWGQRSSKKR RDDE VAEEKEPAEVLKSAGETGKGLMRS+YL
Sbjct: 836 NTFNLWYDSLGGDAIGVTWGQRSSKKRGRDDEAVAEEKEPAEVLKSAGETGKGLMRSVYL 889

Query: 182 LKAPRLTT 190
           LKAPRLTT
Sbjct: 896 LKAPRLTT 889

[Close]

BLAST of Csa6G104060 vs. TrEMBL
Match: F6GWW2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0023g01830 PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 2.9e-66
Identity = 125/184 (67.93%), Postives = 152/184 (82.61%), Query Frame = 1


Query: 4    ELKRLAAYARSSADLLTRLMLQHQVDSCLWESLFRTPLTNYDAVILLHRDKLPYPQRLLF 63
            EL+RL AYARSSA+LLT+L+L  Q+DS  WE LFRTPL NYDAVILLHR+K+PYPQRLLF
Sbjct: 876  ELRRLVAYARSSANLLTKLILGGQIDSYKWECLFRTPLNNYDAVILLHREKMPYPQRLLF 935

Query: 64   PSELNQGTHVAKGNPTKIFTPFLSPRNLKASSENIKDRLLVNFDPLRCYIEDLQKEFSNT 123
            PSE+NQG HVA+GN +K F PFL P ++K +S ++KD LLV+FDPLRC+I DL++EF N 
Sbjct: 936  PSEMNQGKHVAQGNASKAFHPFLLPEHMKGNSPDLKDTLLVDFDPLRCFIGDLEEEFPNA 995

Query: 124  FNLWYDSLGGDAIGVTWGQRSSKKRERDDEDVAEEKEPAEVLKSAGETGKGLMRSIYLLK 183
            F LWYDSLGGDAIG+ W + SSKKR R +E+  EEK+P  VLK+ GE GKG +RSIYLLK
Sbjct: 996  FKLWYDSLGGDAIGMMWERSSSKKRGRSEEN-EEEKDPVNVLKAVGEVGKGFVRSIYLLK 1055

Query: 184  APRL 188
            +PRL
Sbjct: 1056 SPRL 1058

[Close]

BLAST of Csa6G104060 vs. TrEMBL
Match: M5VUX3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000658mg PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 1.0e-63
Identity = 118/184 (64.13%), Postives = 150/184 (81.52%), Query Frame = 1


Query: 4    ELKRLAAYARSSADLLTRLMLQHQVDSCLWESLFRTPLTNYDAVILLHRDKLPYPQRLLF 63
            ELKRL AYA SSA+LLT+L+ +   DS  WE LF+TPL NYDAVILLH DKLPYPQRLLF
Sbjct: 865  ELKRLMAYAGSSANLLTKLISEDHNDSYRWECLFKTPLNNYDAVILLHGDKLPYPQRLLF 924

Query: 64   PSELNQGTHVAKGNPTKIFTPFLSPRNLKASSENIKDRLLVNFDPLRCYIEDLQKEFSNT 123
             SELNQG HVA+GN +K+F PFL P +L  +SE+++++LLVNFDP+RC++ D++ ++SNT
Sbjct: 925  SSELNQGVHVARGNASKVFHPFLLPGDLNGNSEDLRNKLLVNFDPMRCFVGDVEAKYSNT 984

Query: 124  FNLWYDSLGGDAIGVTWGQRSSKKRERDDEDVAEEKEPAEVLKSAGETGKGLMRSIYLLK 183
            F LWYDSLGGDA+G+TWG+ SSKKR R +E+  E K+P ++LK  G+ GKG +R IYLLK
Sbjct: 985  FKLWYDSLGGDAVGITWGRYSSKKRGR-EEEAEEVKDPTDILKDVGKVGKGFVRGIYLLK 1044

Query: 184  APRL 188
            APRL
Sbjct: 1045 APRL 1047

[Close]

BLAST of Csa6G104060 vs. TrEMBL
Match: A0A067L2Y0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23753 PE=4 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 4.0e-63
Identity = 124/185 (67.03%), Postives = 150/185 (81.08%), Query Frame = 1


Query: 4    ELKRLAAYARSSADLLTRLMLQHQVDSCLWESLFRTPLTNYDAVILLHRDKLPYPQRLLF 63
            ELKRL AYARSSA+LL+RL+L+   DS  WE LFRTPL NYDAVILLH D+LPYPQRLLF
Sbjct: 869  ELKRLVAYARSSANLLSRLVLEDHTDSYRWECLFRTPLNNYDAVILLHGDRLPYPQRLLF 928

Query: 64   PSELNQGTHVAKGNPTKIFTPFLSPRNLKASSENIKDRLLVNFDPLRCYIEDLQKEFSNT 123
            PSELNQG  VA+GN +K+F P LSPR+LK SSE +K++L+VNFDPLRCYI D+QKEF NT
Sbjct: 929  PSELNQGRLVARGNASKLFQPILSPRDLKGSSEELKNKLMVNFDPLRCYIADIQKEF-NT 988

Query: 124  FNLWYDSLGGDAIGVTWGQRSSKKRERDDEDVAEEKEPAEVLKSAGETGKGLMRSIYLLK 183
              LWYDSLG DAIG+TW    +KKR R  E+ +E ++P ++LK+ GE GKG +RS+Y LK
Sbjct: 989  MKLWYDSLGSDAIGLTW---ETKKRGR--EETSETEDPIDMLKAVGEVGKGFVRSVYFLK 1047

Query: 184  APRLT 189
            APRL+
Sbjct: 1049 APRLS 1047

[Close]

BLAST of Csa6G104060 vs. TAIR10
Match: AT1G63810.1 (AT1G63810.1 Nrap protein (InterPro:IPR005554))

HSP 1 Score: 238.8 bits (608), Expect = 2.7e-63
Identity = 115/186 (61.83%), Postives = 145/186 (77.96%), Query Frame = 1


Query: 2    LKELKRLAAYARSSADLLTRLMLQHQVDSCLWESLFRTPLTNYDAVILLHRDKLPYPQRL 61
            L E KRL AYARSSA++L++++LQ   DS  WE LFRTPL NYDAVILLHRDKLPYP+RL
Sbjct: 867  LLEQKRLVAYARSSANVLSKMVLQEHNDSVQWECLFRTPLNNYDAVILLHRDKLPYPRRL 926

Query: 62   LFPSELNQGTHVAKGNPTKIFTPFLSPRNLKASSENIKDRLLVNFDPLRCYIEDLQKEFS 121
            LFPSELNQG HVA+G  +++F PF+SP +LK S E +K++L+V+F+P +C +  LQ+EF 
Sbjct: 927  LFPSELNQGKHVARGKASRLFNPFMSPGDLKRSHEELKNKLMVDFEPTKCLLSGLQEEF- 986

Query: 122  NTFNLWYDSLGGDAIGVTWGQRSSKKRERDDEDVAEEK-EPAEVLKSAGETGKGLMRSIY 181
             T   WYD +GGDAIG+TW + +SKKRERD+E+  EE+  P E+LK+ GE GKGL+R IY
Sbjct: 987  GTLKPWYDHIGGDAIGLTWNKHNSKKRERDEEEEEEEESNPMEMLKAVGEMGKGLVRDIY 1046

Query: 182  LLKAPR 187
            LLK PR
Sbjct: 1047 LLKPPR 1051

[Close]

BLAST of Csa6G104060 vs. NCBI nr
Match: gi|700191294|gb|KGN46498.1| (hypothetical protein Csa_6G104060 [Cucumis sativus])

HSP 1 Score: 382.1 bits (980), Expect = 5.7e-103
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 1


Query: 1   MLKELKRLAAYARSSADLLTRLMLQHQVDSCLWESLFRTPLTNYDAVILLHRDKLPYPQR 60
           MLKELKRLAAYARSSADLLTRLMLQHQVDSCLWESLFRTPLTNYDAVILLHRDKLPYPQR
Sbjct: 1   MLKELKRLAAYARSSADLLTRLMLQHQVDSCLWESLFRTPLTNYDAVILLHRDKLPYPQR 60

Query: 61  LLFPSELNQGTHVAKGNPTKIFTPFLSPRNLKASSENIKDRLLVNFDPLRCYIEDLQKEF 120
           LLFPSELNQGTHVAKGNPTKIFTPFLSPRNLKASSENIKDRLLVNFDPLRCYIEDLQKEF
Sbjct: 61  LLFPSELNQGTHVAKGNPTKIFTPFLSPRNLKASSENIKDRLLVNFDPLRCYIEDLQKEF 120

Query: 121 SNTFNLWYDSLGGDAIGVTWGQRSSKKRERDDEDVAEEKEPAEVLKSAGETGKGLMRSIY 180
           SNTFNLWYDSLGGDAIGVTWGQRSSKKRERDDEDVAEEKEPAEVLKSAGETGKGLMRSIY
Sbjct: 121 SNTFNLWYDSLGGDAIGVTWGQRSSKKRERDDEDVAEEKEPAEVLKSAGETGKGLMRSIY 180

Query: 181 LLKAPRLTT 190
           LLKAPRLTT
Sbjct: 181 LLKAPRLTT 189

[Close]

BLAST of Csa6G104060 vs. NCBI nr
Match: gi|778722064|ref|XP_011658398.1| (PREDICTED: nucleolar protein 6 [Cucumis sativus])

HSP 1 Score: 377.1 bits (967), Expect = 1.8e-101
Identity = 186/188 (98.94%), Postives = 187/188 (99.47%), Query Frame = 1


Query: 2   LKELKRLAAYARSSADLLTRLMLQHQVDSCLWESLFRTPLTNYDAVILLHRDKLPYPQRL 61
           + ELKRLAAYARSSADLLTRLMLQHQVDSCLWESLFRTPLTNYDAVILLHRDKLPYPQRL
Sbjct: 797 VSELKRLAAYARSSADLLTRLMLQHQVDSCLWESLFRTPLTNYDAVILLHRDKLPYPQRL 856

Query: 62  LFPSELNQGTHVAKGNPTKIFTPFLSPRNLKASSENIKDRLLVNFDPLRCYIEDLQKEFS 121
           LFPSELNQGTHVAKGNPTKIFTPFLSPRNLKASSENIKDRLLVNFDPLRCYIEDLQKEFS
Sbjct: 857 LFPSELNQGTHVAKGNPTKIFTPFLSPRNLKASSENIKDRLLVNFDPLRCYIEDLQKEFS 916

Query: 122 NTFNLWYDSLGGDAIGVTWGQRSSKKRERDDEDVAEEKEPAEVLKSAGETGKGLMRSIYL 181
           NTFNLWYDSLGGDAIGVTWGQRSSKKRERDDEDVAEEKEPAEVLKSAGETGKGLMRSIYL
Sbjct: 917 NTFNLWYDSLGGDAIGVTWGQRSSKKRERDDEDVAEEKEPAEVLKSAGETGKGLMRSIYL 976

Query: 182 LKAPRLTT 190
           LKAPRLTT
Sbjct: 977 LKAPRLTT 984

[Close]

BLAST of Csa6G104060 vs. NCBI nr
Match: gi|659119654|ref|XP_008459772.1| (PREDICTED: nucleolar protein 6 isoform X2 [Cucumis melo])

HSP 1 Score: 365.2 bits (936), Expect = 7.1e-98
Identity = 180/188 (95.74%), Postives = 184/188 (97.87%), Query Frame = 1


Query: 2    LKELKRLAAYARSSADLLTRLMLQHQVDSCLWESLFRTPLTNYDAVILLHRDKLPYPQRL 61
            + ELKRLAAYARSSADLLTRL+LQHQVDSCLWESLFRTPLTNYDAVILLHRDKLPYPQRL
Sbjct: 871  VSELKRLAAYARSSADLLTRLILQHQVDSCLWESLFRTPLTNYDAVILLHRDKLPYPQRL 930

Query: 62   LFPSELNQGTHVAKGNPTKIFTPFLSPRNLKASSENIKDRLLVNFDPLRCYIEDLQKEFS 121
            LFPSELNQGTHVAKGNP+KIFTPFLSPRNLKASS NIKDRLLVNFDPLRCYIEDLQKEFS
Sbjct: 931  LFPSELNQGTHVAKGNPSKIFTPFLSPRNLKASSGNIKDRLLVNFDPLRCYIEDLQKEFS 990

Query: 122  NTFNLWYDSLGGDAIGVTWGQRSSKKRERDDEDVAEEKEPAEVLKSAGETGKGLMRSIYL 181
            NTFNLWYDSLGGDAIGVTWGQRSSKKR RDDE VAEEKEPAEVLKSAGETGKGLMRS+YL
Sbjct: 991  NTFNLWYDSLGGDAIGVTWGQRSSKKRGRDDEAVAEEKEPAEVLKSAGETGKGLMRSVYL 1050

Query: 182  LKAPRLTT 190
            LKAPRLTT
Sbjct: 1051 LKAPRLTT 1058

[Close]

BLAST of Csa6G104060 vs. NCBI nr
Match: gi|659119652|ref|XP_008459771.1| (PREDICTED: nucleolar protein 6 isoform X1 [Cucumis melo])

HSP 1 Score: 360.5 bits (924), Expect = 1.8e-96
Identity = 180/189 (95.24%), Postives = 184/189 (97.35%), Query Frame = 1


Query: 2    LKELKRLAAYARSSADLLTRLMLQHQVDSCLWESLFRTPLTNYDAVILLHRDKLPYPQRL 61
            + ELKRLAAYARSSADLLTRL+LQHQVDSCLWESLFRTPLTNYDAVILLHRDKLPYPQRL
Sbjct: 871  VSELKRLAAYARSSADLLTRLILQHQVDSCLWESLFRTPLTNYDAVILLHRDKLPYPQRL 930

Query: 62   LFPSELNQ-GTHVAKGNPTKIFTPFLSPRNLKASSENIKDRLLVNFDPLRCYIEDLQKEF 121
            LFPSELNQ GTHVAKGNP+KIFTPFLSPRNLKASS NIKDRLLVNFDPLRCYIEDLQKEF
Sbjct: 931  LFPSELNQAGTHVAKGNPSKIFTPFLSPRNLKASSGNIKDRLLVNFDPLRCYIEDLQKEF 990

Query: 122  SNTFNLWYDSLGGDAIGVTWGQRSSKKRERDDEDVAEEKEPAEVLKSAGETGKGLMRSIY 181
            SNTFNLWYDSLGGDAIGVTWGQRSSKKR RDDE VAEEKEPAEVLKSAGETGKGLMRS+Y
Sbjct: 991  SNTFNLWYDSLGGDAIGVTWGQRSSKKRGRDDEAVAEEKEPAEVLKSAGETGKGLMRSVY 1050

Query: 182  LLKAPRLTT 190
            LLKAPRLTT
Sbjct: 1051 LLKAPRLTT 1059

[Close]

BLAST of Csa6G104060 vs. NCBI nr
Match: gi|307136425|gb|ADN34232.1| (nucleolar RNA-associated protein [Cucumis melo subsp. melo])

HSP 1 Score: 325.5 bits (833), Expect = 6.3e-86
Identity = 166/188 (88.30%), Postives = 170/188 (90.43%), Query Frame = 1


Query: 2   LKELKRLAAYARSSADLLTRLMLQHQVDSCLWESLFRTPLTNYDAVILLHRDKLPYPQRL 61
           + ELKRLAAYARSSADLLTRL+LQHQVDSCLWESLFRTPLTNYDAVILLHRDKLPYPQRL
Sbjct: 716 VSELKRLAAYARSSADLLTRLILQHQVDSCLWESLFRTPLTNYDAVILLHRDKLPYPQRL 775

Query: 62  LFPSELNQGTHVAKGNPTKIFTPFLSPRNLKASSENIKDRLLVNFDPLRCYIEDLQKEFS 121
           LFPSELNQGTHVAKGNP+KIFTPFLSPRNLKASS NIKDRLL              KEFS
Sbjct: 776 LFPSELNQGTHVAKGNPSKIFTPFLSPRNLKASSGNIKDRLL--------------KEFS 835

Query: 122 NTFNLWYDSLGGDAIGVTWGQRSSKKRERDDEDVAEEKEPAEVLKSAGETGKGLMRSIYL 181
           NTFNLWYDSLGGDAIGVTWGQRSSKKR RDDE VAEEKEPAEVLKSAGETGKGLMRS+YL
Sbjct: 836 NTFNLWYDSLGGDAIGVTWGQRSSKKRGRDDEAVAEEKEPAEVLKSAGETGKGLMRSVYL 889

Query: 182 LKAPRLTT 190
           LKAPRLTT
Sbjct: 896 LKAPRLTT 889

The following BLAST results are available for this feature:

BLAST of Csa6G104060 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KAM4_CUCSA	3.9e-103	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G104060 PE=4 SV=1	[more]
E5GCN3_CUCME	4.4e-86	88.30	Nucleolar RNA-associated protein OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
F6GWW2_VITVI	2.9e-66	67.93	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0023g01830 PE=4 SV=...	[more]
M5VUX3_PRUPE	1.0e-63	64.13	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000658mg PE=4 SV=1	[more]
A0A067L2Y0_JATCU	4.0e-63	67.03	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23753 PE=4 SV=1	[more]

BLAST of Csa6G104060 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G63810.1	2.7e-63	61.83	Nrap protein (InterPro:IPR005554)	[more]

BLAST of Csa6G104060 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700191294\|gb\|KGN46498.1\|	5.7e-103	100.00	hypothetical protein Csa_6G104060 [Cucumis sativus]	[more]
gi\|778722064\|ref\|XP_011658398.1\|	1.8e-101	98.94	PREDICTED: nucleolar protein 6 [Cucumis sativus]	[more]
gi\|659119654\|ref\|XP_008459772.1\|	7.1e-98	95.74	PREDICTED: nucleolar protein 6 isoform X2 [Cucumis melo]	[more]
gi\|659119652\|ref\|XP_008459771.1\|	1.8e-96	95.24	PREDICTED: nucleolar protein 6 isoform X1 [Cucumis melo]	[more]
gi\|307136425\|gb\|ADN34232.1\|	6.3e-86	88.30	nucleolar RNA-associated protein [Cucumis melo subsp. melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005554	Nrap

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005829	cytosol
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU116128	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa6G104060.1	Csa6G104060.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU116128	CU116128	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005554	Nrap protein	PANTHER	PTHR17972	NUCLEOLAR RNA-ASSOCIATED PROTEIN	coord: 5..189 score: 1.2
IPR005554	Nrap protein	PFAM	PF03813	Nrap	coord: 5..151 score: 2.3

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa6G104060	Watermelon (97103) v2	cuwmbB468
Csa6G104060	Watermelon (97103) v2	cuwmbB474
Csa6G104060	Wax gourd	cuwgoB536
Csa6G104060	Cucurbita maxima (Rimu)	cmacuB372
Csa6G104060	Cucurbita maxima (Rimu)	cmacuB897
Csa6G104060	Cucurbita maxima (Rimu)	cmacuB911
Csa6G104060	Cucurbita moschata (Rifu)	cmocuB362
Csa6G104060	Cucurbita moschata (Rifu)	cmocuB882
Csa6G104060	Cucurbita moschata (Rifu)	cmocuB897
Csa6G104060	Melon (DHL92) v3.5.1	cumeB429
Csa6G104060	Watermelon (Charleston Gray)	cuwcgB476
Csa6G104060	Watermelon (Charleston Gray)	cuwcgB482
Csa6G104060	Watermelon (97103) v1	cuwmB542
Csa6G104060	Watermelon (97103) v1	cuwmB544
Csa6G104060	Cucurbita pepo (Zucchini)	cpecuB149
Csa6G104060	Cucurbita pepo (Zucchini)	cpecuB318
Csa6G104060	Cucurbita pepo (Zucchini)	cpecuB331
Csa6G104060	Bottle gourd (USVL1VR-Ls)	culsiB396
Csa6G104060	Bottle gourd (USVL1VR-Ls)	culsiB402
Csa6G104060	Cucumber (Gy14) v2	cgybcuB282
Csa6G104060	Melon (DHL92) v3.6.1	cumedB409
Csa6G104060	Silver-seed gourd	carcuB0089
Csa6G104060	Silver-seed gourd	carcuB0093
Csa6G104060	Silver-seed gourd	carcuB0149