Csa6G089770 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAACAAGAAAAACGTGGTAATTCAAGTCAAGAACAATATGGAGGAACGGCTGACGGAATTAGTACCGGTGAACGAGTTTGGATCATCAAGAAAAACCATCAAACCTTCCATTTACAAAATACCAAAGTTCATGAAAGATATCCAACCGAATGCGGACAAGCCACAGTTGGTTGTCGTTTGGGCCATACCATCATGGGGACGAGGATTTGGTTACAATGGAACAGGAAAAACTGAAAGTGTTTTGGCATCTGGTAAAGGGTGATGTTGCCACTTACGAGTCGATTTTGAGTCAAGTGTCGAACATTTTGGAAGATCTATATGCAGCATAAGATCATCTTGAAGAGTATTGGAGGGAGAATGCTGTCAAGTTCATGGAGATGATGATTATAGATGCGTGTTTCGTGCTGGTTTTCTTCTCGAAAGATAAAATTTACAAGTCGCTAATTACTTTCAAATCAGATATAAAACGAGACATTTTGTTGCTTGAGAATCAGCTGCCTTTCCAACTTCTTCAACTGATGTATGAAATATTCCCACTTAAGGTACATATTCTTAATCTATGA ATGAACAAGAAAAACGTGGTAATTCAAGTCAAGAACAATATGGAGGAACGGCTGACGGAATTAGTACCGGTGAACGAGTTTGGATCATCAAGAAAAACCATCAAACCTTCCATTTACAAAATACCAAAGTTCATGAAAGATATCCAACCGAATGCGGACAAGCCACAGTTGGTTGTCGTTTGGGCCATACCATCATGGGGACGAGGATTTGGTTACAATGGAACAGGAAAAACTGAAAGTGTTTTGGCATCTGATCATCTTGAAGAGTATTGGAGGGAGAATGCTGTCAAGTTCATGGAGATGATGATTATAGATGCGTGTTTCGTGCTGGTTTTCTTCTCGAAAGATAAAATTTACAAGTCGCTAATTACTTTCAAATCAGATATAAAACGAGACATTTTGTTGCTTGAGAATCAGCTGCCTTTCCAACTTCTTCAACTGATGTATGAAATATTCCCACTTAAGGTACATATTCTTAATCTATGA ATGAACAAGAAAAACGTGGTAATTCAAGTCAAGAACAATATGGAGGAACGGCTGACGGAATTAGTACCGGTGAACGAGTTTGGATCATCAAGAAAAACCATCAAACCTTCCATTTACAAAATACCAAAGTTCATGAAAGATATCCAACCGAATGCGGACAAGCCACAGTTGGTTGTCGTTTGGGCCATACCATCATGGGGACGAGGATTTGGTTACAATGGAACAGGAAAAACTGAAAGTGTTTTGGCATCTGATCATCTTGAAGAGTATTGGAGGGAGAATGCTGTCAAGTTCATGGAGATGATGATTATAGATGCGTGTTTCGTGCTGGTTTTCTTCTCGAAAGATAAAATTTACAAGTCGCTAATTACTTTCAAATCAGATATAAAACGAGACATTTTGTTGCTTGAGAATCAGCTGCCTTTCCAACTTCTTCAACTGATGTATGAAATATTCCCACTTAAGGTACATATTCTTAATCTATGA MNKKNVVIQVKNNMEERLTELVPVNEFGSSRKTIKPSIYKIPKFMKDIQPNADKPQLVVVWAIPSWGRGFGYNGTGKTESVLASDHLEEYWRENAVKFMEMMIIDACFVLVFFSKDKIYKSLITFKSDIKRDILLLENQLPFQLLQLMYEIFPLKVHILNL*
BLAST of Csa6G089770 vs. TrEMBL
Match: A0A0A0KF61_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G089770 PE=4 SV=1) HSP 1 Score: 325.9 bits (834), Expect = 2.9e-86 Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 1
BLAST of Csa6G089770 vs. TrEMBL
Match: E5GB49_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 160.2 bits (404), Expect = 2.1e-36 Identity = 100/190 (52.63%), Postives = 120/190 (63.16%), Query Frame = 1
BLAST of Csa6G089770 vs. TrEMBL
Match: E5GB51_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 3.9e-19 Identity = 54/80 (67.50%), Postives = 65/80 (81.25%), Query Frame = 1
BLAST of Csa6G089770 vs. TrEMBL
Match: E5GB51_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 5.3e-08 Identity = 64/210 (30.48%), Postives = 90/210 (42.86%), Query Frame = 1
HSP 2 Score: 100.5 bits (249), Expect = 2.0e-18 Identity = 50/59 (84.75%), Postives = 56/59 (94.92%), Query Frame = 1
BLAST of Csa6G089770 vs. TrEMBL
Match: A0A0A0KAA3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G091270 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 9.7e-10 Identity = 53/172 (30.81%), Postives = 86/172 (50.00%), Query Frame = 1
BLAST of Csa6G089770 vs. TAIR10
Match: AT3G44710.1 (AT3G44710.1 Plant protein of unknown function (DUF247)) HSP 1 Score: 49.7 bits (117), Expect = 2.0e-06 Identity = 32/98 (32.65%), Postives = 49/98 (50.00%), Query Frame = 1
BLAST of Csa6G089770 vs. NCBI nr
Match: gi|700191197|gb|KGN46401.1| (hypothetical protein Csa_6G089770 [Cucumis sativus]) HSP 1 Score: 325.9 bits (834), Expect = 4.1e-86 Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 1
BLAST of Csa6G089770 vs. NCBI nr
Match: gi|659120434|ref|XP_008460192.1| (PREDICTED: uncharacterized protein LOC103499077 [Cucumis melo]) HSP 1 Score: 160.2 bits (404), Expect = 3.0e-36 Identity = 100/190 (52.63%), Postives = 120/190 (63.16%), Query Frame = 1
BLAST of Csa6G089770 vs. NCBI nr
Match: gi|659120434|ref|XP_008460192.1| (PREDICTED: uncharacterized protein LOC103499077 [Cucumis melo]) HSP 1 Score: 76.6 bits (187), Expect = 4.3e-11 Identity = 53/172 (30.81%), Postives = 86/172 (50.00%), Query Frame = 1
HSP 2 Score: 160.2 bits (404), Expect = 3.0e-36 Identity = 100/190 (52.63%), Postives = 120/190 (63.16%), Query Frame = 1
BLAST of Csa6G089770 vs. NCBI nr
Match: gi|307135821|gb|ADN33693.1| (hypothetical protein [Cucumis melo subsp. melo]) HSP 1 Score: 102.8 bits (255), Expect = 5.6e-19 Identity = 54/80 (67.50%), Postives = 65/80 (81.25%), Query Frame = 1
BLAST of Csa6G089770 vs. NCBI nr
Match: gi|307135821|gb|ADN33693.1| (hypothetical protein [Cucumis melo subsp. melo]) HSP 1 Score: 65.9 bits (159), Expect = 7.6e-08 Identity = 64/210 (30.48%), Postives = 90/210 (42.86%), Query Frame = 1
HSP 2 Score: 100.5 bits (249), Expect = 2.8e-18 Identity = 50/59 (84.75%), Postives = 56/59 (94.92%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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