Csa6G089240 (gene) Cucumber (Chinese Long) v2

NameCsa6G089240
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr6 : 6114219 .. 6114434 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTGGTGGAGAGAGAATGATGCCGCCGCGATTGAAGTTGGTGAGAGAGAGCAGATGCCGGCCTCTAGGATGGGGAATTAAGCTCGTAAAGTATACTGGGGTCGGCAAGAGAGATCGTAGAGGGATTGAAGATGGCTGGCAGGACGAACGTCGAAGGGAGGTGGCGTGGTGTGAAATGGTTGAGGCGAGGCCACGAGATATTGGGATGGATTAG

mRNA sequence

ATGGGTGGTGGAGAGAGAATGATGCCGCCGCGATTGAAGTTGGTGAGAGAGAGCAGATGCCGGCCTCTAGGATGGGGAATTAAGCTCGTAAAGTATACTGGGGTCGGCAAGAGAGATCGTAGAGGGATTGAAGATGGCTGGCAGGACGAACGTCGAAGGGAGGTGGCGTGGTGTGAAATGGTTGAGGCGAGGCCACGAGATATTGGGATGGATTAG

Coding sequence (CDS)

ATGGGTGGTGGAGAGAGAATGATGCCGCCGCGATTGAAGTTGGTGAGAGAGAGCAGATGCCGGCCTCTAGGATGGGGAATTAAGCTCGTAAAGTATACTGGGGTCGGCAAGAGAGATCGTAGAGGGATTGAAGATGGCTGGCAGGACGAACGTCGAAGGGAGGTGGCGTGGTGTGAAATGGTTGAGGCGAGGCCACGAGATATTGGGATGGATTAG

Protein sequence

MGGGERMMPPRLKLVRESRCRPLGWGIKLVKYTGVGKRDRRGIEDGWQDERRREVAWCEMVEARPRDIGMD*
BLAST of Csa6G089240 vs. TrEMBL
Match: A0A0A0KDD5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G089240 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 3.0e-35
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 1

Query: 1  MGGGERMMPPRLKLVRESRCRPLGWGIKLVKYTGVGKRDRRGIEDGWQDERRREVAWCEM 60
          MGGGERMMPPRLKLVRESRCRPLGWGIKLVKYTGVGKRDRRGIEDGWQDERRREVAWCEM
Sbjct: 1  MGGGERMMPPRLKLVRESRCRPLGWGIKLVKYTGVGKRDRRGIEDGWQDERRREVAWCEM 60

Query: 61 VEARPRDIGMD 72
          VEARPRDIGMD
Sbjct: 61 VEARPRDIGMD 71

BLAST of Csa6G089240 vs. NCBI nr
Match: gi|700191193|gb|KGN46397.1| (hypothetical protein Csa_6G089240 [Cucumis sativus])

HSP 1 Score: 155.2 bits (391), Expect = 4.3e-35
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 1

Query: 1  MGGGERMMPPRLKLVRESRCRPLGWGIKLVKYTGVGKRDRRGIEDGWQDERRREVAWCEM 60
          MGGGERMMPPRLKLVRESRCRPLGWGIKLVKYTGVGKRDRRGIEDGWQDERRREVAWCEM
Sbjct: 1  MGGGERMMPPRLKLVRESRCRPLGWGIKLVKYTGVGKRDRRGIEDGWQDERRREVAWCEM 60

Query: 61 VEARPRDIGMD 72
          VEARPRDIGMD
Sbjct: 61 VEARPRDIGMD 71

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KDD5_CUCSA3.0e-35100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G089240 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700191193|gb|KGN46397.1|4.3e-35100.00hypothetical protein Csa_6G089240 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU101683cucumber EST collection version 3.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa6G089240.1Csa6G089240.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU101683CU101683transcribed_cluster


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa6G089240CSPI06G07240Wild cucumber (PI 183967)cpicuB314
The following gene(s) are paralogous to this gene:

None