Csa6G084590 (gene) Cucumber (Chinese Long) v2

NameCsa6G084590
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr6 : 5635550 .. 5635781 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGGTGTAGTGGGCAGAGTCGTCGATGATCGAATGGGGAAGGTGATCGAGATCAAGGGCAGGGAGGTGACCGAGAATTTGGGTGATGCTAATTTGTTTGGAGCAAAGAAATATGAAGATCAGAAGCAAACATATGACTTGAGTGACCTCTATGTTCCAGTACTCATGAGGGAGAAGACAGAAAACAAAGTTGTTATGAGGACAGTTTAGGATACGCAATAGCATATGCTCACA

mRNA sequence

ATGGGGAAGGTGATCGAGATCAAGGGCAGGGAGGTGACCGAGAATTTGGGTGATGCTAATTTGTTTGGAGCAAAGAAATATGAAGATCAGAAGCAAACATATGACTTGAGTGACCTCTATGTTCCAGTACTCATGAGGGAGAAGACAGAAAACAAAGTTGTTATGAGGACAGTTTAG

Coding sequence (CDS)

ATGGGGAAGGTGATCGAGATCAAGGGCAGGGAGGTGACCGAGAATTTGGGTGATGCTAATTTGTTTGGAGCAAAGAAATATGAAGATCAGAAGCAAACATATGACTTGAGTGACCTCTATGTTCCAGTACTCATGAGGGAGAAGACAGAAAACAAAGTTGTTATGAGGACAGTTTAG

Protein sequence

MGKVIEIKGREVTENLGDANLFGAKKYEDQKQTYDLSDLYVPVLMREKTENKVVMRTV*
BLAST of Csa6G084590 vs. TrEMBL
Match: A0A0A0K980_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G084590 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 5.6e-24
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 1

Query: 1  MGKVIEIKGREVTENLGDANLFGAKKYEDQKQTYDLSDLYVPVLMREKTENKVVMRTV 59
          MGKVIEIKGREVTENLGDANLFGAKKYEDQKQTYDLSDLYVPVLMREKTENKVVMRTV
Sbjct: 1  MGKVIEIKGREVTENLGDANLFGAKKYEDQKQTYDLSDLYVPVLMREKTENKVVMRTV 58

BLAST of Csa6G084590 vs. NCBI nr
Match: gi|700191121|gb|KGN46325.1| (hypothetical protein Csa_6G084590 [Cucumis sativus])

HSP 1 Score: 117.5 bits (293), Expect = 8.1e-24
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 1

Query: 1  MGKVIEIKGREVTENLGDANLFGAKKYEDQKQTYDLSDLYVPVLMREKTENKVVMRTV 59
          MGKVIEIKGREVTENLGDANLFGAKKYEDQKQTYDLSDLYVPVLMREKTENKVVMRTV
Sbjct: 1  MGKVIEIKGREVTENLGDANLFGAKKYEDQKQTYDLSDLYVPVLMREKTENKVVMRTV 58

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0K980_CUCSA5.6e-24100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G084590 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700191121|gb|KGN46325.1|8.1e-24100.00hypothetical protein Csa_6G084590 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU157657cucumber EST collection version 3.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa6G084590.1Csa6G084590.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU157657CU157657transcribed_cluster


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa6G084590CsGy6G006610Cucumber (Gy14) v2cgybcuB282
The following gene(s) are paralogous to this gene:

None