Csa6G058180 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGACGGATTCAATTCTTAGTCCAAAAGCCACAACTTCTCCCAACAACATTTTCATACTCGCCGGGCAGAGCAACATGGCTGGTCGAGGAGGGGTTTCACTAGATCCAACCACAGATAAAATGGTATGGGATGGATATATACCGCTTGAATGCGAATCCAACGACTCAATATTTCGATTGAATGCTGATATGGTATGGGAACAAGCCCATGAACCACTCCATTGGGACATTGATGTTGTAAAGACCAATGGGATTGGACCCGGCATGGCCTTTGCCAATGAGCTTTTGGCTATAGGTGGGAAGAGGATTGGTGCCATTGGCCTTGTTCCATGTGCCATTGGAGGATCCCATTTGAAAGAATGGGTTAAAGGGACTAATAGGTATGATAATTTGGTTGAAAGGATTAGGGCTTCAGAAAAAAATGGAGGGACAGTTCAAGGAATTTTGTGGTATCAAGGAGAGTCTGATGCTGCTGTTGAAGAAGAAGCTATGTGTTATGAAAGAGAGCTCACTAAGTTCTTCATCGACTTGCGTGCTGACACGAACCATCCTGAACTACCCATCATCTTGGTTTGTTATTGTTTTTCTTTAACTAATATTGATTAAATATAGTCATGATTACACATCATTTGCTATATAGATTTTAGGAAAATAACAATTCCATTATTTTAAGAAAACTAAAATTGTTTTACATGATTTGATAAATTTTAAGAGTGCAACAACATAGGTGGATTACACAAGGGTGGAACCATGTTGTACTTTTCTATTTTTAATGTTTAAAAACAATATCTTTAGAAAACAAAATGCAATTTTGATAGATGGAGATTGAGTTTACAATAACATTCTTGTAATGAGTTTTAAAAATATTACTTGAGGTTTGAACCGATAATTTGATCATTCAATTTTTACTAGCTAAAGAATTGAAAAGTTTTTATAGCATTAAAAATTATGCTATGAAAAATTGTCTTCCTATAAGGTTGAGATATATATATATAAAATAAAAAGTTATTTTTAATAAAAGAATAAAAAATGAAAGACATGAGTCGAAATTTAGCCAAACCAAAACTTAAGTGATTACGATATTAAATTTGAAAACTTCGATTATAAAATGCTACTAAATTTAAACTTGATATATATTTTTGCGATATCTTATATTGATTTGAATGCTAAAAAAATTGGATACAGGTGAAGCTAGTAACTCATGATTTTTTCTTAAGTCCAAATATAAGCTTCAAGGAAGAAGTATGTAATGCTTTGGAGGCAGTCACACACAGACTACCAAACGTAACAATGGTGGACGGTCCCATGGCAGTGGGCAACTTTGACGATGGGCTGAATGAAGATAAAGGTCATCTCAATGTTAAATCTGAAGTCAAATTAGGCAAAATGTTTGCTCATTCCTTTTATTCAAACTTTGCCCACAACTTCCTTTCCTAA ATGACGGATTCAATTCTTAGTCCAAAAGCCACAACTTCTCCCAACAACATTTTCATACTCGCCGGGCAGAGCAACATGGCTGGTCGAGGAGGGGTTTCACTAGATCCAACCACAGATAAAATGGTATGGGATGGATATATACCGCTTGAATGCGAATCCAACGACTCAATATTTCGATTGAATGCTGATATGGTATGGGAACAAGCCCATGAACCACTCCATTGGGACATTGATGTTGTAAAGACCAATGGGATTGGACCCGGCATGGCCTTTGCCAATGAGCTTTTGGCTATAGGTGGGAAGAGGATTGGTGCCATTGGCCTTGTTCCATGTGCCATTGGAGGATCCCATTTGAAAGAATGGGTTAAAGGGACTAATAGGTATGATAATTTGGTTGAAAGGATTAGGGCTTCAGAAAAAAATGGAGGGACAGTTCAAGGAATTTTGTGGTATCAAGGAGAGTCTGATGCTGCTGTTGAAGAAGAAGCTATGTGTTATGAAAGAGAGCTCACTAAGTTCTTCATCGACTTGCGTGCTGACACGAACCATCCTGAACTACCCATCATCTTGGTGAAGCTAGTAACTCATGATTTTTTCTTAAGTCCAAATATAAGCTTCAAGGAAGAAGTATGTAATGCTTTGGAGGCAGTCACACACAGACTACCAAACGTAACAATGGTGGACGGTCCCATGGCAGTGGGCAACTTTGACGATGGGCTGAATGAAGATAAAGGTCATCTCAATGTTAAATCTGAAGTCAAATTAGGCAAAATGTTTGCTCATTCCTTTTATTCAAACTTTGCCCACAACTTCCTTTCCTAA ATGACGGATTCAATTCTTAGTCCAAAAGCCACAACTTCTCCCAACAACATTTTCATACTCGCCGGGCAGAGCAACATGGCTGGTCGAGGAGGGGTTTCACTAGATCCAACCACAGATAAAATGGTATGGGATGGATATATACCGCTTGAATGCGAATCCAACGACTCAATATTTCGATTGAATGCTGATATGGTATGGGAACAAGCCCATGAACCACTCCATTGGGACATTGATGTTGTAAAGACCAATGGGATTGGACCCGGCATGGCCTTTGCCAATGAGCTTTTGGCTATAGGTGGGAAGAGGATTGGTGCCATTGGCCTTGTTCCATGTGCCATTGGAGGATCCCATTTGAAAGAATGGGTTAAAGGGACTAATAGGTATGATAATTTGGTTGAAAGGATTAGGGCTTCAGAAAAAAATGGAGGGACAGTTCAAGGAATTTTGTGGTATCAAGGAGAGTCTGATGCTGCTGTTGAAGAAGAAGCTATGTGTTATGAAAGAGAGCTCACTAAGTTCTTCATCGACTTGCGTGCTGACACGAACCATCCTGAACTACCCATCATCTTGGTGAAGCTAGTAACTCATGATTTTTTCTTAAGTCCAAATATAAGCTTCAAGGAAGAAGTATGTAATGCTTTGGAGGCAGTCACACACAGACTACCAAACGTAACAATGGTGGACGGTCCCATGGCAGTGGGCAACTTTGACGATGGGCTGAATGAAGATAAAGGTCATCTCAATGTTAAATCTGAAGTCAAATTAGGCAAAATGTTTGCTCATTCCTTTTATTCAAACTTTGCCCACAACTTCCTTTCCTAA MTDSILSPKATTSPNNIFILAGQSNMAGRGGVSLDPTTDKMVWDGYIPLECESNDSIFRLNADMVWEQAHEPLHWDIDVVKTNGIGPGMAFANELLAIGGKRIGAIGLVPCAIGGSHLKEWVKGTNRYDNLVERIRASEKNGGTVQGILWYQGESDAAVEEEAMCYERELTKFFIDLRADTNHPELPIILVKLVTHDFFLSPNISFKEEVCNALEAVTHRLPNVTMVDGPMAVGNFDDGLNEDKGHLNVKSEVKLGKMFAHSFYSNFAHNFLS*
BLAST of Csa6G058180 vs. Swiss-Prot
Match: CAES_ARATH (Probable carbohydrate esterase At4g34215 OS=Arabidopsis thaliana GN=At4g34215 PE=1 SV=2) HSP 1 Score: 198.0 bits (502), Expect = 1.4e-49 Identity = 110/254 (43.31%), Postives = 146/254 (57.48%), Query Frame = 1
BLAST of Csa6G058180 vs. TrEMBL
Match: A0A0A0K9J9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G058180 PE=4 SV=1) HSP 1 Score: 562.8 bits (1449), Expect = 2.3e-157 Identity = 273/273 (100.00%), Postives = 273/273 (100.00%), Query Frame = 1
BLAST of Csa6G058180 vs. TrEMBL
Match: E5GB85_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 246.5 bits (628), Expect = 3.7e-62 Identity = 131/270 (48.52%), Postives = 172/270 (63.70%), Query Frame = 1
BLAST of Csa6G058180 vs. TrEMBL
Match: A0A0A0LNC5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G356040 PE=4 SV=1) HSP 1 Score: 241.5 bits (615), Expect = 1.2e-60 Identity = 125/268 (46.64%), Postives = 169/268 (63.06%), Query Frame = 1
BLAST of Csa6G058180 vs. TrEMBL
Match: B9R763_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1589130 PE=4 SV=1) HSP 1 Score: 222.6 bits (566), Expect = 5.8e-55 Identity = 122/250 (48.80%), Postives = 152/250 (60.80%), Query Frame = 1
BLAST of Csa6G058180 vs. TrEMBL
Match: A0A067KZS9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16089 PE=4 SV=1) HSP 1 Score: 221.9 bits (564), Expect = 9.8e-55 Identity = 119/250 (47.60%), Postives = 156/250 (62.40%), Query Frame = 1
BLAST of Csa6G058180 vs. TAIR10
Match: AT3G53010.1 (AT3G53010.1 Domain of unknown function (DUF303) ) HSP 1 Score: 205.7 bits (522), Expect = 3.7e-53 Identity = 120/260 (46.15%), Postives = 149/260 (57.31%), Query Frame = 1
BLAST of Csa6G058180 vs. TAIR10
Match: AT4G34215.1 (AT4G34215.1 Domain of unknown function (DUF303) ) HSP 1 Score: 198.0 bits (502), Expect = 7.7e-51 Identity = 110/254 (43.31%), Postives = 146/254 (57.48%), Query Frame = 1
BLAST of Csa6G058180 vs. NCBI nr
Match: gi|449446514|ref|XP_004141016.1| (PREDICTED: probable carbohydrate esterase At4g34215 [Cucumis sativus]) HSP 1 Score: 562.8 bits (1449), Expect = 3.4e-157 Identity = 273/273 (100.00%), Postives = 273/273 (100.00%), Query Frame = 1
BLAST of Csa6G058180 vs. NCBI nr
Match: gi|659082064|ref|XP_008441649.1| (PREDICTED: probable carbohydrate esterase At4g34215 [Cucumis melo]) HSP 1 Score: 483.0 bits (1242), Expect = 3.4e-133 Identity = 230/247 (93.12%), Postives = 239/247 (96.76%), Query Frame = 1
BLAST of Csa6G058180 vs. NCBI nr
Match: gi|659087703|ref|XP_008444593.1| (PREDICTED: probable carbohydrate esterase At4g34215 [Cucumis melo]) HSP 1 Score: 258.8 bits (660), Expect = 1.0e-65 Identity = 136/270 (50.37%), Postives = 174/270 (64.44%), Query Frame = 1
BLAST of Csa6G058180 vs. NCBI nr
Match: gi|307135858|gb|ADN33727.1| (hypothetical protein [Cucumis melo subsp. melo]) HSP 1 Score: 246.5 bits (628), Expect = 5.3e-62 Identity = 131/270 (48.52%), Postives = 172/270 (63.70%), Query Frame = 1
BLAST of Csa6G058180 vs. NCBI nr
Match: gi|778671052|ref|XP_011649575.1| (PREDICTED: probable carbohydrate esterase At4g34215 [Cucumis sativus]) HSP 1 Score: 241.5 bits (615), Expect = 1.7e-60 Identity = 125/268 (46.64%), Postives = 169/268 (63.06%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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