Csa6G057180 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTTTGCAGATCATCTCCTTGCAAAAGCTAGCGAAAATGTTGGCACAGAAAAGTGGACAATTAACTCTAGAATGATCGGATATATTTTTGGCTCAATCTGCTTAAATTCCAAATGGAGTTTCTTCATTCTTCTTAGAATGATCATATATATTTAGGTTCTTTCTCTAGACTTTTGTTGTTTTATTCCATTTTTTTCATCTTTATTTACATTGTTTTCTACATCTTTAACTGGGTTAGCTAGATTGTTCTCGTATAAGTGAATGGATTAAAGGGACTGGTAGGTATACAAGCTTGATCCGACGGATCAATGCTTCTTTGGAGTCTGGTGGCCGCCTACAAGGGTTTGTATGGTTTCAAGGAGAATCTGATGCTGCATTAGAGGTAGAATCACAAGTCTACCACCAAAATTTGATAAACTTTTTTAAGGATCTTCGTGACGACCTGAACCAACCGACTTTGCCCATCCTACTGGTTTGTGATCTCTATCTATCTTTCATTTTTTATTTTAGTTACTTAAAATTTTCACTTGTGGATTTTTTTAAATTTGTAGGTGAAGATAGCTAACCACGATCTCAACATTAGCCCATTTATAAGTTATGTAGAGGACGTAAGAAAGGCGGAAGAGGCAGTCGATCATGAGTTGCTTGACGTAACAACTGTGGATGCTAAAAAAGCAGTCCAACATGTTCTGAATCTCGGCCAAGAACCTTATAATCACGATGGACATCTCAGTGTACACACTGAGGTAAAAATAGGAATAATGCTGGCCAAGGCTTATATAAAATTTAGTTTGAAGTAG ATGGCTTTTGCAGATCATCTCCTTGCAAAAGCTAGCGAAAATCTAGATTGTTCTCGTATAAGTGAATGGATTAAAGGGACTGGTAGGTATACAAGCTTGATCCGACGGATCAATGCTTCTTTGGAGTCTGGTGGCCGCCTACAAGGGTTTGTATGGTTTCAAGGAGAATCTGATGCTGCATTAGAGGTAGAATCACAAGTCTACCACCAAAATTTGATAAACTTTTTTAAGGATCTTCGTGACGACCTGAACCAACCGACTTTGCCCATCCTACTGGTGAAGATAGCTAACCACGATCTCAACATTAGCCCATTTATAAGTTATGTAGAGGACGTAAGAAAGGCGGAAGAGGCAGTCGATCATGAGTTGCTTGACGTAACAACTGTGGATGCTAAAAAAGCAGTCCAACATGTTCTGAATCTCGGCCAAGAACCTTATAATCACGATGGACATCTCAGTGTACACACTGAGGTAAAAATAGGAATAATGCTGGCCAAGGCTTATATAAAATTTAGTTTGAAGTAG ATGGCTTTTGCAGATCATCTCCTTGCAAAAGCTAGCGAAAATCTAGATTGTTCTCGTATAAGTGAATGGATTAAAGGGACTGGTAGGTATACAAGCTTGATCCGACGGATCAATGCTTCTTTGGAGTCTGGTGGCCGCCTACAAGGGTTTGTATGGTTTCAAGGAGAATCTGATGCTGCATTAGAGGTAGAATCACAAGTCTACCACCAAAATTTGATAAACTTTTTTAAGGATCTTCGTGACGACCTGAACCAACCGACTTTGCCCATCCTACTGGTGAAGATAGCTAACCACGATCTCAACATTAGCCCATTTATAAGTTATGTAGAGGACGTAAGAAAGGCGGAAGAGGCAGTCGATCATGAGTTGCTTGACGTAACAACTGTGGATGCTAAAAAAGCAGTCCAACATGTTCTGAATCTCGGCCAAGAACCTTATAATCACGATGGACATCTCAGTGTACACACTGAGGTAAAAATAGGAATAATGCTGGCCAAGGCTTATATAAAATTTAGTTTGAAGTAG MAFADHLLAKASENLDCSRISEWIKGTGRYTSLIRRINASLESGGRLQGFVWFQGESDAALEVESQVYHQNLINFFKDLRDDLNQPTLPILLVKIANHDLNISPFISYVEDVRKAEEAVDHELLDVTTVDAKKAVQHVLNLGQEPYNHDGHLSVHTEVKIGIMLAKAYIKFSLK*
BLAST of Csa6G057180 vs. Swiss-Prot
Match: CAES_ARATH (Probable carbohydrate esterase At4g34215 OS=Arabidopsis thaliana GN=At4g34215 PE=1 SV=2) HSP 1 Score: 82.8 bits (203), Expect = 4.1e-15 Identity = 50/150 (33.33%), Postives = 81/150 (54.00%), Query Frame = 1
BLAST of Csa6G057180 vs. TrEMBL
Match: A0A0A0KCN1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G057180 PE=4 SV=1) HSP 1 Score: 348.6 bits (893), Expect = 4.4e-93 Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 1
BLAST of Csa6G057180 vs. TrEMBL
Match: A0A0A0K9J9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G058180 PE=4 SV=1) HSP 1 Score: 147.1 bits (370), Expect = 2.0e-32 Identity = 82/179 (45.81%), Postives = 110/179 (61.45%), Query Frame = 1
BLAST of Csa6G057180 vs. TrEMBL
Match: A0A0K9RX51_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_024230 PE=4 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 3.8e-20 Identity = 63/154 (40.91%), Postives = 89/154 (57.79%), Query Frame = 1
BLAST of Csa6G057180 vs. TrEMBL
Match: A0A0A0LNC5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G356040 PE=4 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 8.6e-20 Identity = 72/186 (38.71%), Postives = 99/186 (53.23%), Query Frame = 1
BLAST of Csa6G057180 vs. TrEMBL
Match: A0A0A0KAL7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G135410 PE=4 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 1.5e-19 Identity = 70/186 (37.63%), Postives = 100/186 (53.76%), Query Frame = 1
BLAST of Csa6G057180 vs. TAIR10
Match: AT3G53010.1 (AT3G53010.1 Domain of unknown function (DUF303) ) HSP 1 Score: 86.3 bits (212), Expect = 2.1e-17 Identity = 54/155 (34.84%), Postives = 86/155 (55.48%), Query Frame = 1
BLAST of Csa6G057180 vs. TAIR10
Match: AT4G34215.1 (AT4G34215.1 Domain of unknown function (DUF303) ) HSP 1 Score: 82.8 bits (203), Expect = 2.3e-16 Identity = 50/150 (33.33%), Postives = 81/150 (54.00%), Query Frame = 1
BLAST of Csa6G057180 vs. NCBI nr
Match: gi|778722010|ref|XP_011658391.1| (PREDICTED: probable carbohydrate esterase At4g34215 [Cucumis sativus]) HSP 1 Score: 348.6 bits (893), Expect = 6.4e-93 Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 1
BLAST of Csa6G057180 vs. NCBI nr
Match: gi|700190948|gb|KGN46152.1| (hypothetical protein Csa_6G057180 [Cucumis sativus]) HSP 1 Score: 348.6 bits (893), Expect = 6.4e-93 Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 1
BLAST of Csa6G057180 vs. NCBI nr
Match: gi|659082064|ref|XP_008441649.1| (PREDICTED: probable carbohydrate esterase At4g34215 [Cucumis melo]) HSP 1 Score: 147.5 bits (371), Expect = 2.2e-32 Identity = 82/179 (45.81%), Postives = 110/179 (61.45%), Query Frame = 1
BLAST of Csa6G057180 vs. NCBI nr
Match: gi|449446514|ref|XP_004141016.1| (PREDICTED: probable carbohydrate esterase At4g34215 [Cucumis sativus]) HSP 1 Score: 147.1 bits (370), Expect = 2.8e-32 Identity = 82/179 (45.81%), Postives = 110/179 (61.45%), Query Frame = 1
BLAST of Csa6G057180 vs. NCBI nr
Match: gi|1012218989|ref|XP_015935236.1| (PREDICTED: probable carbohydrate esterase At4g34215 [Arachis duranensis]) HSP 1 Score: 107.1 bits (266), Expect = 3.2e-20 Identity = 62/155 (40.00%), Postives = 93/155 (60.00%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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