Csa6G042300 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa6G042300
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Aleurone layer morphogenesis protein
Location	Chr6 : 3208999 .. 3215165 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCCCATGTATAGTAAATGAATCAAATGCCTCAGAAAGTGGTATCAAAGTCGAGGTAAGAAATTGAGGTCTTCTCACTAAGTTTAGGGACCTTAAGATACAGGTTGTTTTAATTTTGTATTTACTACTGGGACTCCTGATGCTTATGGGAACAGTGACTCATATTTTATTCTCCCTATAAATTTTGGCATTTAGTCATGTCTATACTTCAAAAATTATTATGGGTGCATTCCTTGAAGGATCTGGGCATGTTAAGAGCAGATTTTAAATAATATTTTTTTGGGTACTTTGTATGCATACTTCAATCACTCAAAACGAGATTCAATGTTAGGATCTTTGGGCCAAGAGACAGCTTGGGGATGGATTGACATGGTTACTCTACTTTAGAGTCCACAAAAGATACTAATTGGTTTTTGGTTTCATCTCTTTGATGGATTAAATTGAAGAACTTGCACATTTAAATCCCTGACTTTTTTGGTAATGTAAAGAACTATCTCGCGTGTTGCAAGGTAAATGGTTTTAAAAAATGAAGTTTTTGAAGAAATTGTGAAATAAGAAAATGATAAGTTACTTCTCAACAAACATAGTGACACCTGGTGTTCAAATTTTGGCATGGCCATATCTGTACTTCAAATCATTTATCTGTGTGATGAGCTTGTAAATCAAACGACAGTTTCATTCTGCATGTGAAAAAAAGATGGTTATTATTGTTGTAAAAAAATAAGCTTGTGCTAACAAGTCAGACTTTTCAGATTGTATTATCTGTTAGCTTTTATGAATTAGTTTTCTCTATATTTCTTTTATTTATAATTCAACTAATAGCATAATTTACTTCCCAGGATGTCGTAAATAAATAATTTTGTGCTAATAACTCAGAATTTTCAGATTTATAATCTATTAGCTTTTAATGAATTAGATTTTACTATATTTCTTTTATTTATAATTTAGCTGATACCATAGTTTACTTTCCAGGATGGGATATTAGCTACAAACCCGTGTATTGCTGAATGCAGTGGTGAAAAGCTTGCTTCTGGAAATCTCTCTGACAATATTTCGTTTGATCAAAATAGGAACGGTGATCATGCTCTCATCACCTGTCAATCGAACCCAGACTCAGAGCATCTTTCCAAGTTACAAGCAATTATTGTTTCAAAAGAAAGAGCACTGTCACAAGCTGCAATTAGAGCTCTAATCAGAAAGAGGGATAAGCTGGTACGGACATACATCTTATATTGTGGTTATATTTCAGGATTATCCTTGTCTCATGATTTTAATTTGAACCAGAAACTTTCTTTTAAAGTTTAGCATGTTGACGCACATATTATATGATAAAGAGCTTAGAGCTTACACCATAATAGTAAAATAGAGATGGGAATAGTGATTTAAATCTCAACTTTCGTAGACGAGATTGTAGGAAAATAATTAATCCTCTGTTATTGTTGTCTGTATCACTATACAATGACATTCAGCTGTCCATTCTTCTCTCTCTATCTGAACAGGGGTTGGTCATAGATTGAGCTCTTTTCAATCATATTACATAATCATTTTTGACAGTGTAATCCATTCGTTCTGTCTGCAGTCTCATCAACAGCGCCTCATTGAAGATGAGATTGCTCAGTGTGATAAAAACATGCAGACAATATTAAGGGGTAAGCTTTATTGTCTCTTTTCCTTTTCTGTTCCTTCTGTTTTTGTTTTGTTTTTACACTTTTTGTCTATTTGAAATATTTCATGTACAAAACCTTCTAGAAATTTAGATAATTTCCCTTTTCAAATACTTGATGAACCCCTCCCCCAGCTATCTATGATTTTTGGTCTTGTAAGGCCACTGCACCCAAGCTAAAGTATTTTTCAGTATTGGCTAGAGACTAAGATTTGAATTATCGTCATGATCACTATTTTAAGTGTTGGCATATTTTGAGCTTCAAGAGGGAGTAACAGTAGTATTTTTGGATTTACTTTTTGTTATTGCTTTATTGAATTGTTTGGTGTATATTTTGGAGCTAAATTTTCAATATTGTATGTACGTACGTTGATGGATAGTGTTAAATTAGAACAAGTAATATTAGAAACTCAGATTAAAATTAAAACTTTTCTAAAACTTGTGGAGTGCTTCTGCTATTCTAAGTACTAACTCATCATTGGGTGTGTCTGCGTGGCTAACAGCAATGGAGATGCTTTTTAATCTATAGGTATCATAATTAGCCAAAGAAAATGTCTGAACTGCATATATATATTTTGGTTGCTGAAGGTGATGAAGATGATTTGGTTTTAAAGCTGGATTCTGTGATTGAATGTTGCAATGATATATGCCCAAGAAGCACTGCCGAAGACAAATCTTATCAATACTTTGAAGAAAACTGCTCATCTCAATATGTCACAAGGAAGCGATTGTCAGAAGCAATTCTCTGCATACAGAATCCATGTCTGGTTGGTTAATAATTGAAGAAAATTAATTTGACATTTTTTAACATTCCAGGGTATTTGCATGTTTGTATTTGTGTTATGGTTATGTCCTAATGCTGCCCACGGCATATTTATATATTTTTATAAGAGATGCAAGTAAAACATTAAAAGAGAGGCTACAAGATCAAAGGGGCAGGATAGGAACTCTTCAAAAAATTGTACTGCACAAAAACACATAAGACATCGGTATAACAGATTGATGTTAAATAGTTTTGTTATGGCACTTAGTATAGAAATTGCAAATGCTTGGACTTAGAAAAAAATTACACCGTCCATAAGGTGGCCCACCATCTTCTAGCCTCTTACTATTTTATCATTGAGATGGTATAGCCAATATCACCAATTTGCTACAATCAACTAGTAAACCCTTAGGCTTATTATTTGAAATCTTACTATAAAGTACTGTGACAAAAGGAAGATCAAAAAGTGAGAATTAACTACTAGGGTTGACCTAAGGGTTAAGTTGACAGAATTAACTGAGTTATGGTTTCAAACATCAATATGAAAGTTGGTCTGGATATCTAACGATATTGAGAAAAACAAAAGGAAAGAAGAGAAATAGGAAGCCGATGCCTCCTGTTGCAATTCAGAAACCCGCCAAAGTTTTAATTTGAAAGGATGGTGAGAGTTAGTGTTTTGAATGATGCTCTTAAGAGCATGTACAGAGAAGAGGGGGAAACAGCAGGTCATGATCAGGCCTTCTCCGAAAGTGATTATCACGTTTCTTTTGGTTATGCAGAAGCTATTGGTGAATTTGAGTTTGTAGATGATCAAAGATCTGGAAAAATTGTTGTTGAACTAAACTGTAGGCTGAACAAATGTGGGGTTATTAGTCTTTAGTTTGATGTGGGTGTTAAGGAAATTAAAGGTTGGATTGCTAGGTTGCTCCCTTCCTGACAGTTTGGATTCATTGTGCTGTGCTGACATCTGCTGGAATTATGGATCATGAAGAGGCTAGAAGGAAGAATGTTGGAGGCAAAGTCCTTGGTTTCTTCTATTGAACATGGTTTTGAGCATCCATTATGAAGTTTTGACCTAGGTTTCAAATAGTATTACATTTTCTCTCGGTAAAGAAAGATCATTATCCTGTATTGAAAGAAAAAAAGAAGAGGGGAAATAAAGGAAATTGTGACAAGATAATTAACAAAATAATATTTTTGAGTAATCATAGGGAGCCTCACTGAAATAATTTTTTTTTTTAATATTAACATTTATCAGCTTGATAAAGGTGTGAGAGTTGATCTAGCTGTTGGCTAACATTTTGGTAGTAGTGAAGATTGGATATTCATCAAGCTTGGTGCTTTGTGATGCCAAACAGTCAACCAAATATAAACATGGACAGTATGGTAGCATGTTTCAAAACTAGAGATGACATAAGAATGCATTATTAAAAGTTGGAAGTATGACTTGTTATAGACAATTGGAAAGTTCTCACTGCTTCTGGTGAGGGTGCAGGGGGGAGTGAATTTTCAAGGTCTTTTATTTTTTACTTTTTCCCCTTTACTTTATATATTTGACTTATAGTTTATGCAAGGAAACTGCTGCCTCAATATTCTTTATGCTACTAGTTGGGGCCTAATTTTCGAGGTCCTAGTTTTGCCCACTTGTTCTTTTATGTTTTAAACTTCTTTATGGTTCCTCTTGTAACTTTTTTGAACCAGAAACAAGCCTCTTTATTTATAATAATAAATGAGACTAAAGCTCAAAGTACAAGAGAATTATACTAAGAATAAAAAGAACCAAGGATGAATACAATCTAAGACAAACAAAAACTATACTTAGGCAACCTAAAAACGAATTCGAACAGAAAATTAACGAGCTAATCAAAGCCACTCAAAGACAATACGTTTGTAGAAAAGCTAAATACAAAGCCAAACTTAAAATCTCTCAAAAGGAGCCCATTTGAATCTAAAATCTTGCATGCCCAAATCTTCAAGATGAAAGGAGAAAGAGAAACGCCAGGAAGATACAACCAGCTGCCTCAAAACTATCTTACCAAATGCAATCCAATACCCACAGGAACTCAAAGAACTCTTCCAAACCACAGAATTTGTTCCTAAAAGAAATCCCTAGTAGTTACTCCCATTTGGCAAGCCAGACAACGAAAACAAAATACAAAAAACCAATATTAAGCAAGCTACCACAATCAGTGAGGCTTTACTTGAGAAATCATGGAAAGGCAGAAGTTGGTCCAGCAACTGGGGGGACTTTATTCAACAGCTGAGATTCAAACTAGAGTCCACAATCGGCAACTATTGACTTTAGATGATCCGGTAATTGAAACGCTAACTTCCGAAATTGGTTTAACAGATTTCTATCCTCTAGATTCTTTAATCAAAACTGCAATATCCATGTGGATCCCGTGGATTTTCTTTTTGTTAAAGAGAGAATTTCCTTTTCAGGACAGTGTACAGTTTATAAATGTCATGTTGTAATGGCCTTGAAGTAACAGATCTTTATATTTTTACCGGGATGCAACAAATTGATCAATTTTTTTTTTAAACTTGTATTGCCACATAAGACATGCAGTTGAGGATGCTGCTAAGATGGTATTTGTTATGTATGGCAAACTTGGCTAATAAAAGATGTATTGTATTGATGTCTCTAATGTGTTAATGGGAACTGTATCTTGTATGCCTAATTGATTGAGTCCGGTTATCAATTTGCACTTGCATAGCACAAGAAACATTCAACATAAAAAATTCTGAAAAGCATGTAGCATAAACATTTCAATACGGTTTAAAATGCATGGAATGTACATTTGATGTTAAATATTCTATACAGGCATTTAAGAGGGAAAAAATGGTAGTCCGATTTCATTATTTCCACATTTGTAGTTGTAGATATAATGATGCTCTGTTGACTTGGCAGGAACTGGATGGTATATGTCATAAGAATAATTGGATATTGCCAGTTTACGGAGTTTCGTCATTAGATGGTAAAGTCTTCGTGAATTCAGTCAGTTATTACTTATTACTATTATTCTTTTAATTTTTGAGAGGTACGGTTGTTACTGATGGACAGACATTAAATTCTTCTTTTCTAGTGCACTGTGCTTCTCCAAAGTAGATCACGTAGAATGAATGATAAAATGTACTTCTCCTTTCACCTGGAGTACAATGTGCATGACTTTATGGCATTATTTTTTTTTCTGGATTGGACATTATTTTGTTTGTGTTTTTGGTTTGTTTGCTTGTTTGTCTTCTAAAGTATATTGAAAATCGGATTCTACCTTCTTGCATCTCGAAAGATTCTACAAATACAAATTATTATACTCAAGTAGTACAGTGCATTGAAAATTAGATGGTGCCTCATTCTCTCCCATCTTTTCTGATTCTGCCTTTAGAGGCTTTCAGGGTCTTTCTACATATGGATGGCCGATCATGCATAGCTCTTGTGTTTCAATTTGAAATCATTTGAGAGCATCTATTATGGAATAGTGGTGCTAAAGTGTATTATGTGTTTTGAAGGTGGGTTCCAAGCTAATGTGTTTGTAAAAGGGATGGATTTTGAGTATTCAAGCTGTAGCGAACTGTGTTCCGACCCTCGTGATGCGAGAGAATCAGCTGCGATGAAGATGTTGGGTCAACTTTGGAGGATGGCCAATCTGGCCAAGTAGTTTTAGAAGCCTTTGATGGAGGTTATTGTAGTAATGGGTCTGTTTTTGGGTTCTCCATGGAGAGGAGAGGGGGAAAGAGA

mRNA sequence

ATGATCCCATGTATAGTAAATGAATCAAATGCCTCAGAAAGTGGTATCAAAGTCGAGGATGGGATATTAGCTACAAACCCGTGTATTGCTGAATGCAGTGGTGAAAAGCTTGCTTCTGGAAATCTCTCTGACAATATTTCGTTTGATCAAAATAGGAACGGTGATCATGCTCTCATCACCTGTCAATCGAACCCAGACTCAGAGCATCTTTCCAAGTTACAAGCAATTATTGTTTCAAAAGAAAGAGCACTGTCACAAGCTGCAATTAGAGCTCTAATCAGAAAGAGGGATAAGCTGTCTCATCAACAGCGCCTCATTGAAGATGAGATTGCTCAGTGTGATAAAAACATGCAGACAATATTAAGGGGTGATGAAGATGATTTGGTTTTAAAGCTGGATTCTGTGATTGAATGTTGCAATGATATATGCCCAAGAAGCACTGCCGAAGACAAATCTTATCAATACTTTGAAGAAAACTGCTCATCTCAATATGTCACAAGGAAGCGATTGTCAGAAGCAATTCTCTGCATACAGAATCCATGTCTGGAACTGGATGGTATATGTCATAAGAATAATTGGATATTGCCAGTTTACGGAGTTTCGTCATTAGATGGTGGGTTCCAAGCTAATGTGTTTGTAAAAGGGATGGATTTTGAGTATTCAAGCTGTAGCGAACTGTGTTCCGACCCTCGTGATGCGAGAGAATCAGCTGCGATGAAGATGTTGGGTCAACTTTGGAGGATGGCCAATCTGGCCAAGTAG

Coding sequence (CDS)

ATGATCCCATGTATAGTAAATGAATCAAATGCCTCAGAAAGTGGTATCAAAGTCGAGGATGGGATATTAGCTACAAACCCGTGTATTGCTGAATGCAGTGGTGAAAAGCTTGCTTCTGGAAATCTCTCTGACAATATTTCGTTTGATCAAAATAGGAACGGTGATCATGCTCTCATCACCTGTCAATCGAACCCAGACTCAGAGCATCTTTCCAAGTTACAAGCAATTATTGTTTCAAAAGAAAGAGCACTGTCACAAGCTGCAATTAGAGCTCTAATCAGAAAGAGGGATAAGCTGTCTCATCAACAGCGCCTCATTGAAGATGAGATTGCTCAGTGTGATAAAAACATGCAGACAATATTAAGGGGTGATGAAGATGATTTGGTTTTAAAGCTGGATTCTGTGATTGAATGTTGCAATGATATATGCCCAAGAAGCACTGCCGAAGACAAATCTTATCAATACTTTGAAGAAAACTGCTCATCTCAATATGTCACAAGGAAGCGATTGTCAGAAGCAATTCTCTGCATACAGAATCCATGTCTGGAACTGGATGGTATATGTCATAAGAATAATTGGATATTGCCAGTTTACGGAGTTTCGTCATTAGATGGTGGGTTCCAAGCTAATGTGTTTGTAAAAGGGATGGATTTTGAGTATTCAAGCTGTAGCGAACTGTGTTCCGACCCTCGTGATGCGAGAGAATCAGCTGCGATGAAGATGTTGGGTCAACTTTGGAGGATGGCCAATCTGGCCAAGTAG

Protein sequence

MIPCIVNESNASESGIKVEDGILATNPCIAECSGEKLASGNLSDNISFDQNRNGDHALITCQSNPDSEHLSKLQAIIVSKERALSQAAIRALIRKRDKLSHQQRLIEDEIAQCDKNMQTILRGDEDDLVLKLDSVIECCNDICPRSTAEDKSYQYFEENCSSQYVTRKRLSEAILCIQNPCLELDGICHKNNWILPVYGVSSLDGGFQANVFVKGMDFEYSSCSELCSDPRDARESAAMKMLGQLWRMANLAK*

Homology

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BLAST of Csa6G042300 vs. TrEMBL
Match: A0A0A0KE35_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G042300 PE=4 SV=1)

HSP 1 Score: 513.8 bits (1322), Expect = 1.2e-142
Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 1


Query: 1   MIPCIVNESNASESGIKVEDGILATNPCIAECSGEKLASGNLSDNISFDQNRNGDHALIT 60
           MIPCIVNESNASESGIKVEDGILATNPCIAECSGEKLASGNLSDNISFDQNRNGDHALIT
Sbjct: 1   MIPCIVNESNASESGIKVEDGILATNPCIAECSGEKLASGNLSDNISFDQNRNGDHALIT 60

Query: 61  CQSNPDSEHLSKLQAIIVSKERALSQAAIRALIRKRDKLSHQQRLIEDEIAQCDKNMQTI 120
           CQSNPDSEHLSKLQAIIVSKERALSQAAIRALIRKRDKLSHQQRLIEDEIAQCDKNMQTI
Sbjct: 61  CQSNPDSEHLSKLQAIIVSKERALSQAAIRALIRKRDKLSHQQRLIEDEIAQCDKNMQTI 120

Query: 121 LRGDEDDLVLKLDSVIECCNDICPRSTAEDKSYQYFEENCSSQYVTRKRLSEAILCIQNP 180
           LRGDEDDLVLKLDSVIECCNDICPRSTAEDKSYQYFEENCSSQYVTRKRLSEAILCIQNP
Sbjct: 121 LRGDEDDLVLKLDSVIECCNDICPRSTAEDKSYQYFEENCSSQYVTRKRLSEAILCIQNP 180

Query: 181 CLELDGICHKNNWILPVYGVSSLDGGFQANVFVKGMDFEYSSCSELCSDPRDARESAAMK 240
           CLELDGICHKNNWILPVYGVSSLDGGFQANVFVKGMDFEYSSCSELCSDPRDARESAAMK
Sbjct: 181 CLELDGICHKNNWILPVYGVSSLDGGFQANVFVKGMDFEYSSCSELCSDPRDARESAAMK 240

Query: 241 MLGQLWRMANLAK 254
           MLGQLWRMANLAK
Sbjct: 241 MLGQLWRMANLAK 253

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BLAST of Csa6G042300 vs. TrEMBL
Match: F6HYR2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0102g00250 PE=4 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 3.1e-63
Identity = 135/248 (54.44%), Postives = 174/248 (70.16%), Query Frame = 1


Query: 10  NASESGIKVEDGILAT--NPCIAECSGEKLASGN-LSDNISFDQNRN--GDHALITCQSN 69
           NA+ +G   ++GI  +   PC   C GEK+A+G  + + I  DQ+     D AL+T +SN
Sbjct: 299 NAAATGAMAKEGIANSVMTPCTTSCRGEKVANGGEICNFIMPDQDGMLIEDRALVTYESN 358

Query: 70  PDSEHLSKLQAIIVSKERALSQAAIRALIRKRDKLSHQQRLIEDEIAQCDKNMQTILRGD 129
             SEHL KLQ  I SKE+ LSQ A++ L+RKRD+LSHQQR +EDEIAQCDKN+QTIL G 
Sbjct: 359 --SEHLDKLQITIASKEKLLSQTALKVLLRKRDRLSHQQRKLEDEIAQCDKNIQTILDGG 418

Query: 130 EDDLVLKLDSVIECCNDICPRSTAEDKSYQYFEENCSSQYVTRKRLSEAILCIQNPCLEL 189
           EDDL LK++S++E CND CP++   D++Y++ E+  S Q++ RKRLSEAIL IQ  C EL
Sbjct: 419 EDDLALKIESILEFCNDACPQT--RDRTYRHLEDQESPQHIKRKRLSEAILNIQKSCQEL 478

Query: 190 DGICHKNNWILPVYGVSSLDGGFQANVFVKGMDFEYSSCSELCSDPRDARESAAMKMLGQ 249
           DGIC++NNWILP Y VS LDG  +  V VKG+DFE S   E C  PR+ARESAA +ML +
Sbjct: 479 DGICYENNWILPTYRVSLLDGKSEGTVSVKGVDFEISVVGEPCDTPREARESAAAQMLAK 538

Query: 250 LWRMANLA 253
           L  MA  A
Sbjct: 539 LQSMATAA 542

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BLAST of Csa6G042300 vs. TrEMBL
Match: A0A061EJ05_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_020129 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 1.4e-50
Identity = 107/192 (55.73%), Postives = 135/192 (70.31%), Query Frame = 1


Query: 54  GDHALITCQSNPDSEHLSKLQAIIVSKERALSQAAIRALIRKRDKLSHQQRLIEDEIAQC 113
           G+HA +  +SN  SE+ +KLQ II SKE+ LS+ A R L RKRDKL  Q R I DEIAQC
Sbjct: 476 GNHAPVIHESN--SEYSAKLQNIIASKEQILSETAWRVLHRKRDKLVRQLRNIGDEIAQC 535

Query: 114 DKNMQTILRGDEDDLVLKLDSVIECCNDICPRSTAEDKSYQYFEENCSSQYVTRKRLSEA 173
           DK +QTIL G EDDL LK+D +IE CND+C RS ++ ++   +E+ CS+ Y+ R RLSE 
Sbjct: 536 DKQIQTILNGGEDDLELKIDLIIEGCNDVCLRSASQGRTSHDYEDQCSTHYIKRNRLSEE 595

Query: 174 ILCIQNPCLELDGICHKNNWILPVYGVSSLDGGFQANVFVKGMDFEYSSCSELCSDPRDA 233
            L  QNPC ELDGIC+KNNW+LP Y V   DGG+QA V VKG++ E SS  + C  P +A
Sbjct: 596 ALSTQNPCQELDGICNKNNWMLPTYHVFPSDGGYQAKVTVKGVNIESSSVGDACPKPSEA 655

Query: 234 RESAAMKMLGQL 246
           R SAA +ML +L
Sbjct: 656 RGSAAAEMLAKL 665

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BLAST of Csa6G042300 vs. TrEMBL
Match: A0A0D2S874_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G227200 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 3.5e-46
Identity = 102/192 (53.12%), Postives = 124/192 (64.58%), Query Frame = 1


Query: 54  GDHALITCQSNPDSEHLSKLQAIIVSKERALSQAAIRALIRKRDKLSHQQRLIEDEIAQC 113
           G+HA + C+SN  S+  +KL   I SK+  LS+ A+R L+ KRDKL  Q R I DEIAQC
Sbjct: 473 GNHASVICESN--SKCSAKLHNAIASKDHVLSKTALRVLLNKRDKLVLQLRKIGDEIAQC 532

Query: 114 DKNMQTILRGDEDDLVLKLDSVIECCNDICPRSTAEDKSYQYFEENCSSQYVTRKRLSEA 173
           DK MQTIL G EDDL LKLD VIE CND CP ST E+++ + +E+ C +Q   R R SE 
Sbjct: 533 DKKMQTILNGGEDDLELKLDLVIEGCNDACPESTGEERTSKDYEDPCWAQCKKRSRSSEE 592

Query: 174 ILCIQNPCLELDGICHKNNWILPVYGVSSLDGGFQANVFVKGMDFEYSSCSELCSDPRDA 233
                NPC ELDGIC   NW+LP Y V   DGG+QA V VKG +FE  S  + C  P +A
Sbjct: 593 ASSKHNPCQELDGICKDKNWVLPTYQVFPSDGGYQAKVTVKGTNFESLSLGDACPKPHEA 652

Query: 234 RESAAMKMLGQL 246
           R SAA  ML +L
Sbjct: 653 RSSAATTMLAKL 662

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BLAST of Csa6G042300 vs. TrEMBL
Match: A0A0J8FIJ6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g056920 PE=4 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 1.3e-45
Identity = 102/218 (46.79%), Postives = 147/218 (67.43%), Query Frame = 1


Query: 35  EKLASGNLSDNISF-DQNRNGDHALITCQSNPDSEHLSKLQAIIVSKERALSQAAIRALI 94
           EKL S N +D+ +  DQ+   DHAL++    P  +HL K+Q II SKE  +S+ A++ L 
Sbjct: 578 EKLLSDNKTDDTAMSDQDEKQDHALVSFDPTP--KHLHKIQLIIASKENMISETALKVLY 637

Query: 95  RKRDKLSHQQRLIEDEIAQCDKNMQTILRGDEDDLVLKLDSVIECCNDIC-PRSTAEDKS 154
           RKR++L  Q R I DEIA CD+ ++TI+ G EDDL +KLDS++E CN++C P + A    
Sbjct: 638 RKREQLYQQLRNIGDEIALCDRKIETIICGGEDDLAVKLDSIVEGCNELCQPTAVAGGNE 697

Query: 155 YQY-FEENCSSQYVTRKRLSEAILCIQNPCLELDGICHKNNWILPVYGVSSLDGGFQANV 214
                +++     V R RLSEA LC ++PC ELD IC++NNW+LP Y +S+ +GGF+A++
Sbjct: 698 IALPSQDHDILPAVKRTRLSEANLCKRSPCQELDSICNENNWMLPTYSISTSEGGFEASI 757

Query: 215 FVKGMDFEYSSCSELCSDPRDARESAAMKMLGQLWRMA 250
            VKG+DFE SS   +C+ P +AR SAA ++L +L RMA
Sbjct: 758 TVKGVDFECSSEGTICTTPHEARNSAASEVLVKLRRMA 793

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BLAST of Csa6G042300 vs. TAIR10
Match: AT1G05950.1 (AT1G05950.1 unknown protein)

HSP 1 Score: 133.3 bits (334), Expect = 2.2e-31
Identity = 92/250 (36.80%), Postives = 133/250 (53.20%), Query Frame = 1


Query: 1   MIPCIVNESNASESGIKVEDGILATNPCIAECSGEKLASGNLSDNISFDQNRNGDHALIT 60
           M PC  N SN  + G +V     A++P       ++L    L    +     N  H L  
Sbjct: 393 MSPCKDNYSNGEKGGFEV-----ASDP-------KELKERGLQRKKAVPDRLNSIHKL-- 452

Query: 61  CQSNPDSEH-----LSKLQAIIVSKERALSQAAIRALIRKRDKLSHQQRLIEDEIAQCDK 120
             S P S H     L +LQ  ++SK  +LS+ A++ L+ KRDKL+ QQR IEDEIA+CDK
Sbjct: 453 -NSTPASAHNSNPNLEELQTSLLSKATSLSETALKVLLCKRDKLTRQQRNIEDEIAKCDK 512

Query: 121 NMQTILRGDEDDLVLKLDSVIECCNDICPRSTAEDKSYQYFEENCSSQYVTRKRLSEAIL 180
            +Q I +GD +   L+L++V+ECCN+  PR   ++       +  + Q   R +LSE + 
Sbjct: 513 CIQNI-KGDWE---LQLETVLECCNETYPRRNLQESL-----DKSACQSNKRLKLSETLP 572

Query: 181 CIQNPCLELDGICHKNNWILPVYGVSSLDGGFQANVFVKGMDFEYSSCSELCSDPRDARE 240
             ++ C  LD IC  NNW+LP Y V+  DGG++A V + G     +   E  SD  +ARE
Sbjct: 573 STKSLCQRLDDICLMNNWVLPNYRVAPSDGGYEAEVRITGNHVACTIHGEEKSDAEEARE 618

Query: 241 SAAMKMLGQL 246
           SAA  +L +L
Sbjct: 633 SAAACLLTKL 618

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BLAST of Csa6G042300 vs. NCBI nr
Match: gi|778710231|ref|XP_011656540.1| (PREDICTED: uncharacterized protein LOC101206764 isoform X1 [Cucumis sativus])

HSP 1 Score: 513.8 bits (1322), Expect = 1.7e-142
Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 1


Query: 1   MIPCIVNESNASESGIKVEDGILATNPCIAECSGEKLASGNLSDNISFDQNRNGDHALIT 60
           MIPCIVNESNASESGIKVEDGILATNPCIAECSGEKLASGNLSDNISFDQNRNGDHALIT
Sbjct: 430 MIPCIVNESNASESGIKVEDGILATNPCIAECSGEKLASGNLSDNISFDQNRNGDHALIT 489

Query: 61  CQSNPDSEHLSKLQAIIVSKERALSQAAIRALIRKRDKLSHQQRLIEDEIAQCDKNMQTI 120
           CQSNPDSEHLSKLQAIIVSKERALSQAAIRALIRKRDKLSHQQRLIEDEIAQCDKNMQTI
Sbjct: 490 CQSNPDSEHLSKLQAIIVSKERALSQAAIRALIRKRDKLSHQQRLIEDEIAQCDKNMQTI 549

Query: 121 LRGDEDDLVLKLDSVIECCNDICPRSTAEDKSYQYFEENCSSQYVTRKRLSEAILCIQNP 180
           LRGDEDDLVLKLDSVIECCNDICPRSTAEDKSYQYFEENCSSQYVTRKRLSEAILCIQNP
Sbjct: 550 LRGDEDDLVLKLDSVIECCNDICPRSTAEDKSYQYFEENCSSQYVTRKRLSEAILCIQNP 609

Query: 181 CLELDGICHKNNWILPVYGVSSLDGGFQANVFVKGMDFEYSSCSELCSDPRDARESAAMK 240
           CLELDGICHKNNWILPVYGVSSLDGGFQANVFVKGMDFEYSSCSELCSDPRDARESAAMK
Sbjct: 610 CLELDGICHKNNWILPVYGVSSLDGGFQANVFVKGMDFEYSSCSELCSDPRDARESAAMK 669

Query: 241 MLGQLWRMANLAK 254
           MLGQLWRMANLAK
Sbjct: 670 MLGQLWRMANLAK 682

[Close]

BLAST of Csa6G042300 vs. NCBI nr
Match: gi|700190792|gb|KGN45996.1| (hypothetical protein Csa_6G042300 [Cucumis sativus])

HSP 1 Score: 513.8 bits (1322), Expect = 1.7e-142
Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 1


Query: 1   MIPCIVNESNASESGIKVEDGILATNPCIAECSGEKLASGNLSDNISFDQNRNGDHALIT 60
           MIPCIVNESNASESGIKVEDGILATNPCIAECSGEKLASGNLSDNISFDQNRNGDHALIT
Sbjct: 1   MIPCIVNESNASESGIKVEDGILATNPCIAECSGEKLASGNLSDNISFDQNRNGDHALIT 60

Query: 61  CQSNPDSEHLSKLQAIIVSKERALSQAAIRALIRKRDKLSHQQRLIEDEIAQCDKNMQTI 120
           CQSNPDSEHLSKLQAIIVSKERALSQAAIRALIRKRDKLSHQQRLIEDEIAQCDKNMQTI
Sbjct: 61  CQSNPDSEHLSKLQAIIVSKERALSQAAIRALIRKRDKLSHQQRLIEDEIAQCDKNMQTI 120

Query: 121 LRGDEDDLVLKLDSVIECCNDICPRSTAEDKSYQYFEENCSSQYVTRKRLSEAILCIQNP 180
           LRGDEDDLVLKLDSVIECCNDICPRSTAEDKSYQYFEENCSSQYVTRKRLSEAILCIQNP
Sbjct: 121 LRGDEDDLVLKLDSVIECCNDICPRSTAEDKSYQYFEENCSSQYVTRKRLSEAILCIQNP 180

Query: 181 CLELDGICHKNNWILPVYGVSSLDGGFQANVFVKGMDFEYSSCSELCSDPRDARESAAMK 240
           CLELDGICHKNNWILPVYGVSSLDGGFQANVFVKGMDFEYSSCSELCSDPRDARESAAMK
Sbjct: 181 CLELDGICHKNNWILPVYGVSSLDGGFQANVFVKGMDFEYSSCSELCSDPRDARESAAMK 240

Query: 241 MLGQLWRMANLAK 254
           MLGQLWRMANLAK
Sbjct: 241 MLGQLWRMANLAK 253

[Close]

BLAST of Csa6G042300 vs. NCBI nr
Match: gi|659089858|ref|XP_008445718.1| (PREDICTED: uncharacterized protein LOC103488666 isoform X2 [Cucumis melo])

HSP 1 Score: 477.2 bits (1227), Expect = 1.7e-131
Identity = 237/253 (93.68%), Postives = 246/253 (97.23%), Query Frame = 1


Query: 1   MIPCIVNESNASESGIKVEDGILATNPCIAECSGEKLASGNLSDNISFDQNRNGDHALIT 60
           MIPC+VNES+ASESGIKV+DGILATNPCIAECSGEK+ASGNLSDNISFDQNRNGDHALIT
Sbjct: 434 MIPCMVNESDASESGIKVQDGILATNPCIAECSGEKIASGNLSDNISFDQNRNGDHALIT 493

Query: 61  CQSNPDSEHLSKLQAIIVSKERALSQAAIRALIRKRDKLSHQQRLIEDEIAQCDKNMQTI 120
           CQSN  +EHLSKLQAIIVSKE ALSQAAI+ALIRKRDKLSHQQRLIEDEIAQCDKNMQTI
Sbjct: 494 CQSN--AEHLSKLQAIIVSKETALSQAAIKALIRKRDKLSHQQRLIEDEIAQCDKNMQTI 553

Query: 121 LRGDEDDLVLKLDSVIECCNDICPRSTAEDKSYQYFEENCSSQYVTRKRLSEAILCIQNP 180
           LRGDEDDLVLKLDSVI+CCND+C +STAEDKSYQYFEENCSSQYVTRKRLSEAILCIQNP
Sbjct: 554 LRGDEDDLVLKLDSVIDCCNDLC-QSTAEDKSYQYFEENCSSQYVTRKRLSEAILCIQNP 613

Query: 181 CLELDGICHKNNWILPVYGVSSLDGGFQANVFVKGMDFEYSSCSELCSDPRDARESAAMK 240
           C ELDGICHKNNWILPVYGVSSLDGGFQANVFVKGMDFEYSSC ELCSDPRDARESAAMK
Sbjct: 614 CQELDGICHKNNWILPVYGVSSLDGGFQANVFVKGMDFEYSSCGELCSDPRDARESAAMK 673

Query: 241 MLGQLWRMANLAK 254
           MLGQLWRMAN AK
Sbjct: 674 MLGQLWRMANQAK 683

[Close]

BLAST of Csa6G042300 vs. NCBI nr
Match: gi|659089854|ref|XP_008445716.1| (PREDICTED: uncharacterized protein LOC103488666 isoform X1 [Cucumis melo])

HSP 1 Score: 475.3 bits (1222), Expect = 6.6e-131
Identity = 236/253 (93.28%), Postives = 245/253 (96.84%), Query Frame = 1


Query: 1   MIPCIVNESNASESGIKVEDGILATNPCIAECSGEKLASGNLSDNISFDQNRNGDHALIT 60
           MIPC+VNES+ASESGIK +DGILATNPCIAECSGEK+ASGNLSDNISFDQNRNGDHALIT
Sbjct: 434 MIPCMVNESDASESGIKAKDGILATNPCIAECSGEKIASGNLSDNISFDQNRNGDHALIT 493

Query: 61  CQSNPDSEHLSKLQAIIVSKERALSQAAIRALIRKRDKLSHQQRLIEDEIAQCDKNMQTI 120
           CQSN  +EHLSKLQAIIVSKE ALSQAAI+ALIRKRDKLSHQQRLIEDEIAQCDKNMQTI
Sbjct: 494 CQSN--AEHLSKLQAIIVSKETALSQAAIKALIRKRDKLSHQQRLIEDEIAQCDKNMQTI 553

Query: 121 LRGDEDDLVLKLDSVIECCNDICPRSTAEDKSYQYFEENCSSQYVTRKRLSEAILCIQNP 180
           LRGDEDDLVLKLDSVI+CCND+C +STAEDKSYQYFEENCSSQYVTRKRLSEAILCIQNP
Sbjct: 554 LRGDEDDLVLKLDSVIDCCNDLC-QSTAEDKSYQYFEENCSSQYVTRKRLSEAILCIQNP 613

Query: 181 CLELDGICHKNNWILPVYGVSSLDGGFQANVFVKGMDFEYSSCSELCSDPRDARESAAMK 240
           C ELDGICHKNNWILPVYGVSSLDGGFQANVFVKGMDFEYSSC ELCSDPRDARESAAMK
Sbjct: 614 CQELDGICHKNNWILPVYGVSSLDGGFQANVFVKGMDFEYSSCGELCSDPRDARESAAMK 673

Query: 241 MLGQLWRMANLAK 254
           MLGQLWRMAN AK
Sbjct: 674 MLGQLWRMANQAK 683

[Close]

BLAST of Csa6G042300 vs. NCBI nr
Match: gi|659089860|ref|XP_008445719.1| (PREDICTED: uncharacterized protein LOC103488666 isoform X3 [Cucumis melo])

HSP 1 Score: 332.8 bits (852), Expect = 5.3e-88
Identity = 167/181 (92.27%), Postives = 176/181 (97.24%), Query Frame = 1


Query: 1   MIPCIVNESNASESGIKVEDGILATNPCIAECSGEKLASGNLSDNISFDQNRNGDHALIT 60
           MIPC+VNES+ASESGIK +DGILATNPCIAECSGEK+ASGNLSDNISFDQNRNGDHALIT
Sbjct: 434 MIPCMVNESDASESGIKAKDGILATNPCIAECSGEKIASGNLSDNISFDQNRNGDHALIT 493

Query: 61  CQSNPDSEHLSKLQAIIVSKERALSQAAIRALIRKRDKLSHQQRLIEDEIAQCDKNMQTI 120
           CQSN  +EHLSKLQAIIVSKE ALSQAAI+ALIRKRDKLSHQQRLIEDEIAQCDKNMQTI
Sbjct: 494 CQSN--AEHLSKLQAIIVSKETALSQAAIKALIRKRDKLSHQQRLIEDEIAQCDKNMQTI 553

Query: 121 LRGDEDDLVLKLDSVIECCNDICPRSTAEDKSYQYFEENCSSQYVTRKRLSEAILCIQNP 180
           LRGDEDDLVLKLDSVI+CCND+C +STAEDKSYQYFEENCSSQYVTRKRLSEAILCIQNP
Sbjct: 554 LRGDEDDLVLKLDSVIDCCNDLC-QSTAEDKSYQYFEENCSSQYVTRKRLSEAILCIQNP 611

Query: 181 C 182
           C
Sbjct: 614 C 611

The following BLAST results are available for this feature:

BLAST of Csa6G042300 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KE35_CUCSA	1.2e-142	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G042300 PE=4 SV=1	[more]
F6HYR2_VITVI	3.1e-63	54.44	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0102g00250 PE=4 SV=...	[more]
A0A061EJ05_THECC	1.4e-50	55.73	Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_020129 PE=4 SV=1	[more]
A0A0D2S874_GOSRA	3.5e-46	53.13	Uncharacterized protein OS=Gossypium raimondii GN=B456_006G227200 PE=4 SV=1	[more]
A0A0J8FIJ6_BETVU	1.3e-45	46.79	Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g056920 PE=4 S...	[more]

BLAST of Csa6G042300 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G05950.1	2.2e-31	36.80	unknown protein	[more]

BLAST of Csa6G042300 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778710231\|ref\|XP_011656540.1\|	1.7e-142	100.00	PREDICTED: uncharacterized protein LOC101206764 isoform X1 [Cucumis sativus]	[more]
gi\|700190792\|gb\|KGN45996.1\|	1.7e-142	100.00	hypothetical protein Csa_6G042300 [Cucumis sativus]	[more]
gi\|659089858\|ref\|XP_008445718.1\|	1.7e-131	93.68	PREDICTED: uncharacterized protein LOC103488666 isoform X2 [Cucumis melo]	[more]
gi\|659089854\|ref\|XP_008445716.1\|	6.6e-131	93.28	PREDICTED: uncharacterized protein LOC103488666 isoform X1 [Cucumis melo]	[more]
gi\|659089860\|ref\|XP_008445719.1\|	5.3e-88	92.27	PREDICTED: uncharacterized protein LOC103488666 isoform X3 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU144510	cucumber EST collection version 3.0	transcribed_cluster
CU162245	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa6G042300.1	Csa6G042300.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU162245	CU162245	transcribed_cluster
CU144510	CU144510	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33913	FAMILY NOT NAMED	coord: 62..253 score: 1.4
None	No IPR available	PFAM	PF14709	DND1_DSRM	coord: 183..245 score: 6.
None	No IPR available	unknown	SSF54768	dsRNA-binding domain-like	coord: 175..245 score: 2.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa6G042300	MELO3C011646	Melon (DHL92) v3.5.1	cumeB476
Csa6G042300	CSPI06G03560	Wild cucumber (PI 183967)	cpicuB314

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa6G042300	Wax gourd	cuwgoB590
Csa6G042300	Cucumber (Gy14) v1	cgycuB511
Csa6G042300	Cucurbita maxima (Rimu)	cmacuB373
Csa6G042300	Cucurbita maxima (Rimu)	cmacuB913
Csa6G042300	Cucurbita moschata (Rifu)	cmocuB364
Csa6G042300	Cucurbita moschata (Rifu)	cmocuB899
Csa6G042300	Watermelon (Charleston Gray)	cuwcgB502
Csa6G042300	Watermelon (97103) v1	cuwmB459
Csa6G042300	Cucurbita pepo (Zucchini)	cpecuB146
Csa6G042300	Cucurbita pepo (Zucchini)	cpecuB335
Csa6G042300	Bottle gourd (USVL1VR-Ls)	culsiB473
Csa6G042300	Cucumber (Gy14) v2	cgybcuB282
Csa6G042300	Melon (DHL92) v3.6.1	cumedB455
Csa6G042300	Watermelon (97103) v2	cuwmbB493
Csa6G042300	Watermelon (97103) v2	cuwmbB505