BLAST of Csa6G041170 vs. Swiss-Prot
Match:
PPR18_ARATH (Pentatricopeptide repeat-containing protein At1g06710, mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=3 SV=1)
HSP 1 Score: 814.3 bits (2102), Expect = 9.3e-235
Identity = 398/621 (64.09%), Postives = 482/621 (77.62%), Query Frame = 1
Query: 1 MIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGE 60
M+ EGCYPS IFNSLVHAYC S D SYAYKLLKKM KC PGYVVYNILIGSIC +
Sbjct: 363 MMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKD 422
Query: 61 LPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPD 120
+LAEKAY+EML+AG VLNK+NV SF RCLC GK+EKA+ VI EM+G GF+PD
Sbjct: 423 SLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPD 482
Query: 121 TSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLD 180
TSTYS+V+ +LCNAS++E AF LF+EMK G+V DVYTYTI++D F KAG+I+QA W +
Sbjct: 483 TSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFN 542
Query: 181 EMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSG 240
EM GC P VVTYT LIHAYLKAKKVS ANELFE M+++GC PN++TY+ALIDG+CK+G
Sbjct: 543 EMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAG 602
Query: 241 NIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLL 300
+EKACQI+ RM G D+PDVDMYFK ++ +E+PNVVTYGAL+DG CK+H+V++AR LL
Sbjct: 603 QVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLL 662
Query: 301 ETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKD 360
+ M ++GCEPN IVYDALIDG CK KLDEAQEV +M EHG+ +YTYSSLIDR FK
Sbjct: 663 DAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKV 722
Query: 361 KRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTY 420
KR DL KVLSKMLENSCAPN+VIYTEMIDGL KV KTDEAYKLM MMEEKGC+PNVVTY
Sbjct: 723 KRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTY 782
Query: 421 TAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQ 480
TAMIDGFG GK++ CLEL MGSKG APN+VTY VLI+HCC G LD A+ LLEEMKQ
Sbjct: 783 TAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQ 842
Query: 481 TYWPKHVSSYCKVIEGYKREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVAL 540
T+WP H + Y KVIEG+ +EFI SLGLL+E+ ++ +AP + +Y++LIDN +KA RLE+AL
Sbjct: 843 THWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMAL 902
Query: 541 ELHKEVISASMSMAAKKNLYTSLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLM 600
L +EV + S ++ + Y SLI S A+K+ AF+LF +M + GVIP++ +F L+
Sbjct: 903 RLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIK 962
Query: 601 GLIRVRRWEEALQLSDSLCQM 622
GL R + EAL L D + M
Sbjct: 963 GLFRNSKISEALLLLDFISHM 983
HSP 2 Score: 234.6 bits (597), Expect = 3.0e-60
Identity = 174/635 (27.40%), Postives = 287/635 (45.20%), Query Frame = 1
Query: 14 NSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKA 73
N LV +C++ FS A + L +++ +P YN LI + L + A
Sbjct: 204 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRL------DSASLI 263
Query: 74 YNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCN 133
+ EM A ++ + FA LC GK+ +A ++ FVPDT Y+++I LC
Sbjct: 264 HREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVET---ENFVPDTVFYTKLISGLCE 323
Query: 134 ASRVENAFFLFKEMKGTGVVPDVYTY-TILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVV 193
AS E A M+ T +P+V TY T+L C +K + + L+ M+ +GC P+
Sbjct: 324 ASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQ-LGRCKRVLNMMMMEGCYPSPK 383
Query: 194 TYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARM 253
+ +L+HAY + S A +L + M+ G P + Y LI C
Sbjct: 384 IFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSIC--------------- 443
Query: 254 RGDADIPDVDMYFKIKNNVAEK------PNVVTYGALVDGLCKAHKVKDARDLLETMFVD 313
GD D + D+ + +E N + + LC A K + A ++ M
Sbjct: 444 -GDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQ 503
Query: 314 GCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLV 373
G P+T Y +++ C A+K++ A +F +M G +VYTY+ ++D K ++
Sbjct: 504 GFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQA 563
Query: 374 LKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDG 433
K ++M E C PN+V YT +I K K A +L M +GC PN+VTY+A+IDG
Sbjct: 564 RKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDG 623
Query: 434 FGKAGKVDKCLELFREM-GSKGC---------------APNFVTYTVLINHCCATGHLDE 493
KAG+V+K ++F M GSK PN VTY L++ C + ++E
Sbjct: 624 HCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEE 683
Query: 494 AYALLEEMKQTYWPKHVSSYCKVIEGYKREFILSLGLLEEVE-------KNGSAPIILLY 553
A LL+ M + Y +I+G + +G L+E + ++G + Y
Sbjct: 684 ARKLLDAMSMEGCEPNQIVYDALIDG-----LCKVGKLDEAQEVKTEMSEHGFPATLYTY 743
Query: 554 KVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNLYTSLIYSFSYASKIGHAFELFYDM 613
LID + K R ++A ++ +++ S A +YT +I K A++L M
Sbjct: 744 SSLIDRYFKVKRQDLASKVLSKML--ENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMM 803
Query: 614 IRDGVIPDLGTFVHLLMGLIRVRRWEEALQLSDSL 619
G P++ T+ ++ G + + E L+L + +
Sbjct: 804 EEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERM 805
BLAST of Csa6G041170 vs. Swiss-Prot
Match:
PP217_ARATH (Pentatricopeptide repeat-containing protein At3g06920 OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1)
HSP 1 Score: 254.6 bits (649), Expect = 2.8e-66
Identity = 171/608 (28.12%), Postives = 298/608 (49.01%), Query Frame = 1
Query: 8 PSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTF 67
P+++ + +L+ A+ + L ++M++ +P ++ LI G + ++
Sbjct: 166 PAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALS- 225
Query: 68 ELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEV 127
L ++ + L A VL V + SF + GK + A+K HE+ NG PD TY+ +
Sbjct: 226 -LLDEMKSSSLDADIVLYNVCIDSFGKV----GKVDMAWKFFHEIEANGLKPDEVTYTSM 285
Query: 128 IGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGC 187
IG LC A+R++ A +F+ ++ VP Y Y +I + AG +A++ L+ G
Sbjct: 286 IGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGS 345
Query: 188 EPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQ 247
P+V+ Y ++ K KV A ++FE M K PN+ TY LID C++G ++ A +
Sbjct: 346 IPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAFE 405
Query: 248 IYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDG 307
+ M+ PNV T +VD LCK+ K+ +A + E M
Sbjct: 406 LRDSMQ----------------KAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKV 465
Query: 308 CEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVL 367
C P+ I + +LIDG K ++D+A +V+ KM++ N Y+SLI F R +
Sbjct: 466 CTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGH 525
Query: 368 KVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGF 427
K+ M+ +C+P++ + +D + K + ++ + ++ + P+ +Y+ +I G
Sbjct: 526 KIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGL 585
Query: 428 GKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHV 487
KAG ++ ELF M +GC + Y ++I+ C G +++AY LLEEMK + V
Sbjct: 586 IKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTV 645
Query: 488 SSYCKVIEGYKREFIL--SLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALELHKE 547
+Y VI+G + L + L EE + +++Y LID F K GR++ A + +E
Sbjct: 646 VTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEE 705
Query: 548 VISASMSMAAKKNLYT--SLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLMGLI 607
++ ++ NLYT SL+ + A +I A F M P+ T+ L+ GL
Sbjct: 706 LMQKGLT----PNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLC 746
Query: 608 RVRRWEEA 612
+VR++ +A
Sbjct: 766 KVRKFNKA 746
HSP 2 Score: 164.5 bits (415), Expect = 3.9e-39
Identity = 123/469 (26.23%), Postives = 210/469 (44.78%), Query Frame = 1
Query: 127 VIGFLCNASRVENAFFLFKEMKGTGVVPDV-YTYTILIDCFSKAGIIKQAHNWLDEMVRD 186
VIG L V A F+ + +P +Y L+ ++ L EM
Sbjct: 68 VIGVLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVA 127
Query: 187 GCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKA 246
G P+V T ++ +KA K+ ++ ++M P YT LI + + +
Sbjct: 128 GFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMM 187
Query: 247 CQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFV 306
++ +M+ + +P V + L+ G K +V A LL+ M
Sbjct: 188 LTLFQQMQ----------------ELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKS 247
Query: 307 DGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDL 366
+ + ++Y+ ID F K K+D A + FH++ +G P+ TY+S+I L K RLD
Sbjct: 248 SSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDE 307
Query: 367 VLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMID 426
+++ + +N P Y MI G K DEAY L+ KG P+V+ Y ++
Sbjct: 308 AVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILT 367
Query: 427 GFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPK 486
K GKVD+ L++F EM K APN TY +LI+ C G LD A+ L + M++
Sbjct: 368 CLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFP 427
Query: 487 HVSSYCKVIEGYKREFIL--SLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALELH 546
+V + +++ + L + + EE++ P + + LID K GR++ A +++
Sbjct: 428 NVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVY 487
Query: 547 KEVISASMSMAAKKNLYTSLIYSFSYASKIGHAFELFYDMIRDGVIPDL 593
++++ + +YTSLI +F + +++ DMI PDL
Sbjct: 488 EKMLDS--DCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDL 517
HSP 3 Score: 112.5 bits (280), Expect = 1.7e-23
Identity = 85/338 (25.15%), Postives = 142/338 (42.01%), Query Frame = 1
Query: 8 PSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTF 67
P ++ L+H K+ + Y+L M++ C YNI+I C G++
Sbjct: 550 PDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKV------ 609
Query: 68 ELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEK---AYKVIHEMMGNGFVPDTSTY 127
KAY + T + VV++ + G K ++ AY + E + Y
Sbjct: 610 ---NKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIY 669
Query: 128 SEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVR 187
S +I R++ A+ + +E+ G+ P++YT+ L+D KA I +A M
Sbjct: 670 SSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKE 729
Query: 188 DGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEK 247
C P VTY LI+ K +K + A ++ M +G P+ I+YT +I G K+GNI +
Sbjct: 730 LKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAE 789
Query: 248 ACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMF 307
A ++ R + + +PD Y A+++GL ++ DA L E
Sbjct: 790 AGALFDRFKANGGVPD----------------SACYNAMIEGLSNGNRAMDAFSLFEETR 849
Query: 308 VDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHG 343
G + L+D K L++A V + E G
Sbjct: 850 RRGLPIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRETG 862
BLAST of Csa6G041170 vs. Swiss-Prot
Match:
PP445_ARATH (Pentatricopeptide repeat-containing protein At5g65560 OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1)
HSP 1 Score: 254.2 bits (648), Expect = 3.7e-66
Identity = 188/592 (31.76%), Postives = 282/592 (47.64%), Query Frame = 1
Query: 25 DFSYAYKLLKKM---EKCECKPGYVV--YNILIGSICSGGELPGPVTFELAEKAYNEMLS 84
D Y L +KM E+ E K ++ YN L+ S+ G + + ++ Y EML
Sbjct: 158 DALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLV------DEMKQVYMEMLE 217
Query: 85 AGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVEN 144
N C G E+A + + +++ G PD TY+ +I C +++
Sbjct: 218 DKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDS 277
Query: 145 AFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIH 204
AF +F EM G + YT LI A I +A + +M D C PTV TYT LI
Sbjct: 278 AFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIK 337
Query: 205 AYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIP 264
+ +++ S A L + M G PN+ TYT LID C EKA ++ +M +P
Sbjct: 338 SLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMP 397
Query: 265 DVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALI 324
NV+TY AL++G CK ++DA D++E M PNT Y+ LI
Sbjct: 398 ----------------NVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELI 457
Query: 325 DGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCA 384
G+CK+ + +A V +KM+E P+V TY+SLID + D ++LS M +
Sbjct: 458 KGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLV 517
Query: 385 PNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLEL 444
P+ YT MID L K + +EA L +E+KG PNVV YTA+IDG+ KAGKVD+ +
Sbjct: 518 PDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLM 577
Query: 445 FREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKR 504
+M SK C PN +T+ LI+ CA G L EA L E+M + VS+ +I +
Sbjct: 578 LEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLK 637
Query: 505 --EFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALELHKEVISASM---SMA 564
+F + +++ +G+ P Y I + + GRL L E + A M ++
Sbjct: 638 DGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRL-----LDAEDMMAKMRENGVS 697
Query: 565 AKKNLYTSLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVR 607
Y+SLI + + AF++ M G P TF+ L+ L+ ++
Sbjct: 698 PDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMK 721
HSP 2 Score: 249.6 bits (636), Expect = 9.1e-65
Identity = 175/620 (28.23%), Postives = 281/620 (45.32%), Query Frame = 1
Query: 1 MIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGE 60
M+ + P+ +N +V+ YCK + A + + K+ + P + Y LI C +
Sbjct: 209 MLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKD 268
Query: 61 LPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPD 120
L + A K +NEM G N+V LC + ++A + +M + P
Sbjct: 269 L------DSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPT 328
Query: 121 TSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLD 180
TY+ +I LC + R A L KEM+ TG+ P+++TYT+LID ++A L
Sbjct: 329 VRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLG 388
Query: 181 EMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSG 240
+M+ G P V+TY LI+ Y K + A ++ ELM ++ PN TY LI GYCKS
Sbjct: 389 QMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKS- 448
Query: 241 NIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLL 300
N+ KA + +M +PD VVTY +L+DG C++ A LL
Sbjct: 449 NVHKAMGVLNKMLERKVLPD----------------VVTYNSLIDGQCRSGNFDSAYRLL 508
Query: 301 ETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKD 360
M G P+ Y ++ID CK+ +++EA ++F + + G NPNV Y++LID K
Sbjct: 509 SLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKA 568
Query: 361 KRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTY 420
++D +L KML +C PN + + +I GL K EA L M + G +P V T
Sbjct: 569 GKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTD 628
Query: 421 TAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQ 480
T +I K G D F++M S G P+ TYT I C G L +A ++ +M++
Sbjct: 629 TILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRE 688
Query: 481 TYWPKHVSSYCKVIEGY--KREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEV 540
+ +Y +I+GY + + +L+ + G P + LI + ++
Sbjct: 689 NGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLE------ 748
Query: 541 ALELHKEVISASMSMAAKKNLYTSLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHL 600
M +K L + S + EL M+ V P+ ++ L
Sbjct: 749 ------------MKYGKQKGSEPELC-AMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKL 786
Query: 601 LMGLIRVRRWEEALQLSDSL 619
++G+ V A ++ D +
Sbjct: 809 ILGICEVGNLRVAEKVFDHM 786
HSP 3 Score: 242.7 bits (618), Expect = 1.1e-62
Identity = 179/623 (28.73%), Postives = 278/623 (44.62%), Query Frame = 1
Query: 1 MIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGE 60
M +GC + + L+H C + A L KM+ EC P Y +LI S+C
Sbjct: 279 MPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGS-- 338
Query: 61 LPGPVTFELAEKAYN---EMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGF 120
E +A N EM G N LC KFEKA +++ +M+ G
Sbjct: 339 -------ERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGL 398
Query: 121 VPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHN 180
+P+ TY+ +I C +E+A + + M+ + P+ TY LI + K+ + K A
Sbjct: 399 MPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHK-AMG 458
Query: 181 WLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYC 240
L++M+ P VVTY +LI ++ A L LM +G P+ TYT++ID C
Sbjct: 459 VLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLC 518
Query: 241 KSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDAR 300
KS +E+AC ++ + PNVV Y AL+DG CKA KV +A
Sbjct: 519 KSKRVEEACDLFDSLE----------------QKGVNPNVVMYTALIDGYCKAGKVDEAH 578
Query: 301 DLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRL 360
+LE M C PN++ ++ALI G C KL EA + KMV+ G P V T + LI RL
Sbjct: 579 LMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRL 638
Query: 361 FKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNV 420
KD D +ML + P+ YT I + + +A +M M E G P++
Sbjct: 639 LKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDL 698
Query: 421 VTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEE 480
TY+++I G+G G+ + ++ + M GC P+ T+ LI H L E
Sbjct: 699 FTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKH-------------LLE 758
Query: 481 MKQTYWPKHVSSYCKVIEGYKREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLE 540
MK C + EF + LLE++ ++ P Y+ LI + G L
Sbjct: 759 MKYGKQKGSEPELCAM--SNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLR 818
Query: 541 VALELHKEVISASMSMAAKKNLYTSLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVH 600
VA ++ + + + ++ + ++ +L+ K A ++ DMI G +P L +
Sbjct: 819 VAEKVF-DHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKV 859
Query: 601 LLMGLIRVRRWEEALQLSDSLCQ 621
L+ GL + E + +L Q
Sbjct: 879 LICGLYKKGEKERGTSVFQNLLQ 859
HSP 4 Score: 168.7 bits (426), Expect = 2.0e-40
Identity = 123/463 (26.57%), Postives = 206/463 (44.49%), Query Frame = 1
Query: 1 MIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGE 60
M+ P +NSL+ C+S +F AY+LL M P Y +I S+C
Sbjct: 453 MLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKR 512
Query: 61 LPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPD 120
+ E A ++ + G N V + C GK ++A+ ++ +M+ +P+
Sbjct: 513 V------EEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPN 572
Query: 121 TSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLD 180
+ T++ +I LC +++ A L ++M G+ P V T TILI K G A++
Sbjct: 573 SLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQ 632
Query: 181 EMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSG 240
+M+ G +P TYTT I Y + ++ A ++ M G P++ TY++LI GY G
Sbjct: 633 QMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLG 692
Query: 241 NIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKD---AR 300
A + RMR P + + ++ E G+ + LC + +
Sbjct: 693 QTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPE-LCAMSNMMEFDTVV 752
Query: 301 DLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVF-HKMVEHGYNPNVYTYSSLIDR 360
+LLE M PN Y+ LI G C+ L A++VF H G +P+ +++L+
Sbjct: 753 ELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSC 812
Query: 361 LFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPN 420
K K+ + KV+ M+ P + +I GL K + + + + + G +
Sbjct: 813 CCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYED 872
Query: 421 VVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLI 460
+ + +IDG GK G V+ ELF M GC + TY++LI
Sbjct: 873 ELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLI 908
HSP 5 Score: 159.1 bits (401), Expect = 1.6e-37
Identity = 134/524 (25.57%), Postives = 233/524 (44.47%), Query Frame = 1
Query: 8 PSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTF 67
P+ +N L+ YCKS+ A +L KM + + P V YN LI C G F
Sbjct: 426 PNTRTYNELIKGYCKSNVHK-AMGVLNKMLERKVLPDVVTYNSLIDGQCRSGN------F 485
Query: 68 ELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEV 127
+ A + + M G V ++ S LC + E+A + + G P+ Y+ +
Sbjct: 486 DSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTAL 545
Query: 128 IGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGC 187
I C A +V+ A + ++M +P+ T+ LI G +K+A ++MV+ G
Sbjct: 546 IDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGL 605
Query: 188 EPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQ 247
+PTV T T LIH LK A F+ M++ G P+ TYT I YC+ G + A
Sbjct: 606 QPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAED 665
Query: 248 IYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDG 307
+ A+MR +N V+ P++ TY +L+ G + A D+L+ M G
Sbjct: 666 MMAKMR--------------ENGVS--PDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTG 725
Query: 308 CEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVL 367
CEP+ + +LI + + K + G P + S++++ D V+
Sbjct: 726 CEPSQHTFLSLIKHLLEMK--------YGK--QKGSEPELCAMSNMME-------FDTVV 785
Query: 368 KVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLM-LMMEEKGCKPNVVTYTAMIDG 427
++L KM+E+S PN Y ++I G+ +V A K+ M +G P+ + + A++
Sbjct: 786 ELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSC 845
Query: 428 FGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKH 487
K K ++ ++ +M G P + VLI G + ++ + + Q + +
Sbjct: 846 CCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYED 905
Query: 488 VSSYCKVIEGYKREFILS--LGLLEEVEKNGSAPIILLYKVLID 529
++ +I+G ++ ++ L +EKNG Y +LI+
Sbjct: 906 ELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIE 909
BLAST of Csa6G041170 vs. Swiss-Prot
Match:
RF1_ORYSI (Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1 PE=2 SV=1)
HSP 1 Score: 253.8 bits (647), Expect = 4.8e-66
Identity = 170/610 (27.87%), Postives = 284/610 (46.56%), Query Frame = 1
Query: 5 GCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCE---CKPGYVVYNILIGSICSGGEL 64
GC P+ +N L+ C + A +LL M P V Y +I G+
Sbjct: 153 GCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDS 212
Query: 65 PGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDT 124
+ A Y+EML G + + V S LC +KA +V++ M+ NG +PD
Sbjct: 213 ------DKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDC 272
Query: 125 STYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDE 184
TY+ ++ C++ + + A K+M+ GV PDV TY++L+D K G +A D
Sbjct: 273 MTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDS 332
Query: 185 MVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGN 244
M + G +P + TY TL+ Y + + L +LM+ G P+ ++ LI Y K G
Sbjct: 333 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGK 392
Query: 245 IEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLE 304
+++A ++++MR PN VTYGA++ LCK+ +V+DA E
Sbjct: 393 VDQAMLVFSKMRQQG----------------LNPNAVTYGAVIGILCKSGRVEDAMLYFE 452
Query: 305 TMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDK 364
M +G P IVY++LI G C K + A+E+ +M++ G N ++S+ID K+
Sbjct: 453 QMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEG 512
Query: 365 RLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYT 424
R+ K+ M+ PN++ Y +I+G K DEA KL+ M G KPN VTY+
Sbjct: 513 RVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYS 572
Query: 425 AMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQT 484
+I+G+ K +++ L LF+EM S G +P+ +TY +++ T A L + ++
Sbjct: 573 TLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITES 632
Query: 485 YWPKHVSSYCKVIEGYKREFIL--SLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVA 544
+S+Y ++ G + + +L + + + + ++ID +K GR + A
Sbjct: 633 GTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEA 692
Query: 545 LELHKEVISASMSMAAKKNLYTSLIYSFSYASKIGHAF-----ELFYDMIRDGVIPDLGT 604
K++ A S N +T Y + IG +LF M +G D G
Sbjct: 693 ----KDLFVAFSSNGLVPNYWT---YRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGM 733
HSP 2 Score: 240.0 bits (611), Expect = 7.2e-62
Identity = 168/600 (28.00%), Postives = 277/600 (46.17%), Query Frame = 1
Query: 30 YKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNV 89
Y + + E P Y ILIG C G L +L A ++ G ++ +
Sbjct: 72 YNRMARAGADEVTPDLCTYGILIGCCCRAGRL------DLGFAALGNVIKKGFRVDAIAF 131
Query: 90 VSFARCLCGFGKFEKAYKVIHEMMGN-GFVPDTSTYSEVIGFLCNASRVENAFFLFKEM- 149
+ LC + A ++ M G +P+ +Y+ ++ LC+ +R + A L M
Sbjct: 132 TPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMA 191
Query: 150 --KGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAK 209
+G G PDV +YT +I+ F K G +A++ EM+ G P VVTY ++I A KA+
Sbjct: 192 DDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQ 251
Query: 210 KVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYF 269
+ A E+ M+ G P+ +TY +++ GYC SG ++A +MR D
Sbjct: 252 AMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDG--------- 311
Query: 270 KIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKA 329
+P+VVTY L+D LCK + +AR + ++M G +P Y L+ G+
Sbjct: 312 -------VEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATK 371
Query: 330 AKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIY 389
L E + MV +G +P+ Y +S LI K ++D + V SKM + PN V Y
Sbjct: 372 GALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTY 431
Query: 390 TEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGS 449
+I L K + ++A M ++G P + Y ++I G K ++ EL EM
Sbjct: 432 GAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLD 491
Query: 450 KGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGY--KREFIL 509
+G N + + +I+ C G + E+ L E M + +V +Y +I GY +
Sbjct: 492 RGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDE 551
Query: 510 SLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNLYTSL 569
++ LL + G P + Y LI+ + K R+E AL L KE+ S+ +S Y +
Sbjct: 552 AMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVS--PDIITYNII 611
Query: 570 IYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQLSDSLCQMDI 624
+ + A EL+ + G +L T+ +L GL + + ++ALQ+ +LC MD+
Sbjct: 612 LQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDL 647
HSP 3 Score: 92.0 bits (227), Expect = 2.4e-17
Identity = 70/306 (22.88%), Postives = 123/306 (40.20%), Query Frame = 1
Query: 1 MIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGE 60
M+ G + FNS++ ++CK + KL + M + KP + YN LI C G+
Sbjct: 467 MLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGK 526
Query: 61 LPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPD 120
+ + A K + M+S G N V + C + E A + EM +G PD
Sbjct: 527 M------DEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPD 586
Query: 121 TSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLD 180
TY+ ++ L R A L+ + +G ++ TY I++ K + A
Sbjct: 587 IITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQ 646
Query: 181 EMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSG 240
+ + T+ +I A LK + A +LF + G PN TY + + G
Sbjct: 647 NLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQG 706
Query: 241 NIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLL 300
+E+ Q++ M + D M I + ++ + G + + + H +A
Sbjct: 707 LLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEAS--T 764
Query: 301 ETMFVD 307
++F+D
Sbjct: 767 ASLFID 764
BLAST of Csa6G041170 vs. Swiss-Prot
Match:
PPR28_ARATH (Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1)
HSP 1 Score: 253.4 bits (646), Expect = 6.3e-66
Identity = 149/490 (30.41%), Postives = 242/490 (49.39%), Query Frame = 1
Query: 66 TFELAE--KAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTST 125
T EL E K M+ G V + + + R C GK KA K++ + G+G VPD T
Sbjct: 115 TGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVIT 174
Query: 126 YSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMV 185
Y+ +I C A + NA + M V PDV TY ++ +G +KQA LD M+
Sbjct: 175 YNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRML 234
Query: 186 RDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIE 245
+ C P V+TYT LI A + V A +L + M +GC P+V+TY L++G CK G ++
Sbjct: 235 QRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLD 294
Query: 246 KACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETM 305
+A + D+P +PNV+T+ ++ +C + DA LL M
Sbjct: 295 EAIKFLN------DMPSSGC----------QPNVITHNIILRSMCSTGRWMDAEKLLADM 354
Query: 306 FVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRL 365
G P+ + ++ LI+ C+ L A ++ KM +HG PN +Y+ L+ K+K++
Sbjct: 355 LRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKM 414
Query: 366 DLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAM 425
D ++ L +M+ C P+IV Y M+ L K K ++A +++ + KGC P ++TY +
Sbjct: 415 DRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTV 474
Query: 426 IDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYW 485
IDG KAGK K ++L EM +K P+ +TY+ L+ G +DEA E ++
Sbjct: 475 IDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGI 534
Query: 486 PKHVSSYCKVIEGY--KREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALE 545
+ ++ ++ G R+ ++ L + G P Y +LI+ G + ALE
Sbjct: 535 RPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALE 585
Query: 546 LHKEVISASM 552
L E+ + +
Sbjct: 595 LLNELCNKGL 585
HSP 2 Score: 242.7 bits (618), Expect = 1.1e-62
Identity = 136/478 (28.45%), Postives = 235/478 (49.16%), Query Frame = 1
Query: 1 MIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGE 60
M+ G P +L+ +C+ A K+L+ +E P + YN++I C GE
Sbjct: 128 MVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGE 187
Query: 61 LPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPD 120
+ ++ ++++ T+L R LC GK ++A +V+ M+ PD
Sbjct: 188 INNALSVLDRMSVSPDVVTYNTIL---------RSLCDSGKLKQAMEVLDRMLQRDCYPD 247
Query: 121 TSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLD 180
TY+ +I C S V +A L EM+ G PDV TY +L++ K G + +A +L+
Sbjct: 248 VITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLN 307
Query: 181 EMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSG 240
+M GC+P V+T+ ++ + + A +L M+ KG P+V+T+ LI+ C+ G
Sbjct: 308 DMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKG 367
Query: 241 NIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLL 300
+ +A I +M +PN ++Y L+ G CK K+ A + L
Sbjct: 368 LLGRAIDILEKMPQHGC----------------QPNSLSYNPLLHGFCKEKKMDRAIEYL 427
Query: 301 ETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKD 360
E M GC P+ + Y+ ++ CK K+++A E+ +++ G +P + TY+++ID L K
Sbjct: 428 ERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKA 487
Query: 361 KRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTY 420
+ +K+L +M P+ + Y+ ++ GLS+ K DEA K E G +PN VT+
Sbjct: 488 GKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTF 547
Query: 421 TAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEM 479
+++ G K+ + D+ ++ M ++GC PN +YT+LI G EA LL E+
Sbjct: 548 NSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNEL 580
HSP 3 Score: 107.8 bits (268), Expect = 4.3e-22
Identity = 74/269 (27.51%), Postives = 135/269 (50.19%), Query Frame = 1
Query: 356 RLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKP 415
++ + L+ K L M+ + P+I+ T +I G ++ KT +A K++ ++E G P
Sbjct: 111 QMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVP 170
Query: 416 NVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALL 475
+V+TY MI G+ KAG+++ L + M +P+ VTY ++ C +G L +A +L
Sbjct: 171 DVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVL 230
Query: 476 EEMKQTYWPKHVSSYCKVIEGYKREFIL--SLGLLEEVEKNGSAPIILLYKVLIDNFVKA 535
+ M Q V +Y +IE R+ + ++ LL+E+ G P ++ Y VL++ K
Sbjct: 231 DRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKE 290
Query: 536 GRLEVALELHKEVISASMSMAAKKNLYTS--LIYSFSYASKIGHAFELFYDMIRDGVIPD 595
GRL+ A++ ++ S+ + N+ T ++ S + A +L DM+R G P
Sbjct: 291 GRLDEAIKFLNDMPSS----GCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPS 350
Query: 596 LGTFVHLLMGLIRVRRWEEALQLSDSLCQ 621
+ TF L+ L R A+ + + + Q
Sbjct: 351 VVTFNILINFLCRKGLLGRAIDILEKMPQ 372
BLAST of Csa6G041170 vs. TrEMBL
Match:
A0A0A0KDY8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G041170 PE=4 SV=1)
HSP 1 Score: 1286.9 bits (3329), Expect = 0.0e+00
Identity = 632/632 (100.00%), Postives = 632/632 (100.00%), Query Frame = 1
Query: 1 MIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGE 60
MIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGE
Sbjct: 1 MIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGE 60
Query: 61 LPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPD 120
LPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPD
Sbjct: 61 LPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPD 120
Query: 121 TSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLD 180
TSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLD
Sbjct: 121 TSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLD 180
Query: 181 EMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSG 240
EMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSG
Sbjct: 181 EMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSG 240
Query: 241 NIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLL 300
NIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLL
Sbjct: 241 NIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLL 300
Query: 301 ETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKD 360
ETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKD
Sbjct: 301 ETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKD 360
Query: 361 KRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTY 420
KRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTY
Sbjct: 361 KRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTY 420
Query: 421 TAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQ 480
TAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQ
Sbjct: 421 TAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQ 480
Query: 481 TYWPKHVSSYCKVIEGYKREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVAL 540
TYWPKHVSSYCKVIEGYKREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVAL
Sbjct: 481 TYWPKHVSSYCKVIEGYKREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVAL 540
Query: 541 ELHKEVISASMSMAAKKNLYTSLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLM 600
ELHKEVISASMSMAAKKNLYTSLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLM
Sbjct: 541 ELHKEVISASMSMAAKKNLYTSLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLM 600
Query: 601 GLIRVRRWEEALQLSDSLCQMDINWLRREDKP 633
GLIRVRRWEEALQLSDSLCQMDINWLRREDKP
Sbjct: 601 GLIRVRRWEEALQLSDSLCQMDINWLRREDKP 632
BLAST of Csa6G041170 vs. TrEMBL
Match:
A0A061EJB3_THECC (Tetratricopeptide repeat (TPR)-like superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_020100 PE=4 SV=1)
HSP 1 Score: 957.6 bits (2474), Expect = 7.6e-276
Identity = 461/632 (72.94%), Postives = 530/632 (83.86%), Query Frame = 1
Query: 1 MIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGE 60
MI EGCYPS IFNSLVHAYCKS DFSYAYKLLKKM KC C+PGYVVYNILIG IC+ E
Sbjct: 358 MITEGCYPSPNIFNSLVHAYCKSGDFSYAYKLLKKMVKCGCQPGYVVYNILIGGICANEE 417
Query: 61 LPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPD 120
LP ELAE AY+EML+AG VLNK+NV + ARCLC GKFEKA K+IHEMM GF+PD
Sbjct: 418 LPSTDVLELAENAYSEMLAAGVVLNKINVSNLARCLCSIGKFEKACKIIHEMMSKGFIPD 477
Query: 121 TSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLD 180
TSTY++VI LCNAS+VENAF LF+EMK GV PDVYTYTILID F KAG+I+QA NW D
Sbjct: 478 TSTYAKVIAHLCNASKVENAFLLFEEMKKNGVGPDVYTYTILIDSFCKAGLIEQARNWFD 537
Query: 181 EMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSG 240
EMV GC P VVTYT LIHAYLKA+KVS A+ELFE+M+++GC PNV+TYTALIDG+CK+G
Sbjct: 538 EMVGGGCAPNVVTYTALIHAYLKARKVSKADELFEMMLSQGCIPNVVTYTALIDGHCKAG 597
Query: 241 NIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLL 300
IEKACQIYARM + +IPDVD+YFK+ ++ A+ PNV TYGALVDGLCKAHKVK+ARDLL
Sbjct: 598 QIEKACQIYARMHTNVEIPDVDLYFKVVDSDAKVPNVFTYGALVDGLCKAHKVKEARDLL 657
Query: 301 ETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKD 360
E M GC+PN +VYDALIDGFCK KLDEAQEVF KM EHGY+PN+YTYSSLIDRLFKD
Sbjct: 658 EAMSTVGCKPNHVVYDALIDGFCKGGKLDEAQEVFSKMSEHGYSPNIYTYSSLIDRLFKD 717
Query: 361 KRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTY 420
KRLDL LKVLSKMLENSCAPN+VIYTEMIDGL K KTDEAYKLMLMMEEKGC PNVVTY
Sbjct: 718 KRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKADKTDEAYKLMLMMEEKGCYPNVVTY 777
Query: 421 TAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQ 480
TAMIDGFGKAGK++K LEL +MGSKGCAPNF+TY VLINHCCA G LD+AY LLEEMKQ
Sbjct: 778 TAMIDGFGKAGKINKSLELLEQMGSKGCAPNFITYGVLINHCCAAGLLDKAYELLEEMKQ 837
Query: 481 TYWPKHVSSYCKVIEGYKREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVAL 540
TYWP+H++ Y KVIEG+ REFI SLGLL+E+ K+ + P+I +Y+VLI+NF+KAG+LEVAL
Sbjct: 838 TYWPRHMAGYRKVIEGFNREFITSLGLLDEIGKSETLPVIPVYRVLINNFLKAGKLEVAL 897
Query: 541 ELHKEVISASMSMAAKKNLYTSLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLM 600
+LH E+ S S AA K+ Y +LI S S A K+ AFEL+ DMIR G +P+L TF+HL+
Sbjct: 898 QLHNEIASFSPISAAYKSTYDALIESLSLAHKVNKAFELYADMIRMGGVPELSTFIHLIK 957
Query: 601 GLIRVRRWEEALQLSDSLCQMDINWLRREDKP 633
GLI V +WEEALQLSDSLCQMDI WL+ ++ P
Sbjct: 958 GLITVNKWEEALQLSDSLCQMDIQWLQEKETP 989
BLAST of Csa6G041170 vs. TrEMBL
Match:
A0A061EJB3_THECC (Tetratricopeptide repeat (TPR)-like superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_020100 PE=4 SV=1)
HSP 1 Score: 253.4 bits (646), Expect = 7.0e-64
Identity = 179/633 (28.28%), Postives = 299/633 (47.24%), Query Frame = 1
Query: 12 IFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAE 71
+ N L+ YCK+ ++ A + L +++ KP Y LI L + A
Sbjct: 197 LLNLLIRKYCKNGLWNVALEELGRLKDFGYKPSGATYCALIQVFLQADRL------DTAH 256
Query: 72 KAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFL 131
+ EM AG +++ + +A LC G++ +A ++I + F PDT Y+++I L
Sbjct: 257 LVHREMSDAGFRMDRYTLTCYAYSLCRVGQWREALRLIEK---EEFKPDTVGYTKMISGL 316
Query: 132 CNASRVENAFFLFKEMKGTGVVPDVYTYTILI-DCFSKAGIIKQAHNWLDEMVRDGCEPT 191
C AS E A M+ +P+V TY +L+ C +K + + L+ M+ +GC P+
Sbjct: 317 CEASLFEEAMDFLNRMRANSCIPNVVTYKVLLCGCLNKRQL-GRCKRILNMMITEGCYPS 376
Query: 192 VVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYA 251
+ +L+HAY K+ S A +L + M+ GC P + Y LI G C
Sbjct: 377 PNIFNSLVHAYCKSGDFSYAYKLLKKMVKCGCQPGYVVYNILIGGIC------------- 436
Query: 252 RMRGDADIPDVDMYFKIKNNVAEK------PNVVTYGALVDGLCKAHKVKDARDLLETMF 311
+ ++P D+ +N +E N + L LC K + A ++ M
Sbjct: 437 ---ANEELPSTDVLELAENAYSEMLAAGVVLNKINVSNLARCLCSIGKFEKACKIIHEMM 496
Query: 312 VDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLD 371
G P+T Y +I C A+K++ A +F +M ++G P+VYTY+ LID K ++
Sbjct: 497 SKGFIPDTSTYAKVIAHLCNASKVENAFLLFEEMKKNGVGPDVYTYTILIDSFCKAGLIE 556
Query: 372 LVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMI 431
+M+ CAPN+V YT +I K K +A +L MM +GC PNVVTYTA+I
Sbjct: 557 QARNWFDEMVGGGCAPNVVTYTALIHAYLKARKVSKADELFEMMLSQGCIPNVVTYTALI 616
Query: 432 DGFGKAGKVDKCLEL----------------FREMGSKGCAPNFVTYTVLINHCCATGHL 491
DG KAG+++K ++ F+ + S PN TY L++ C +
Sbjct: 617 DGHCKAGQIEKACQIYARMHTNVEIPDVDLYFKVVDSDAKVPNVFTYGALVDGLCKAHKV 676
Query: 492 DEAYALLEEMKQT-YWPKHVSSYCKVIEGYKREFIL--SLGLLEEVEKNGSAPIILLYKV 551
EA LLE M P HV Y +I+G+ + L + + ++ ++G +P I Y
Sbjct: 677 KEARDLLEAMSTVGCKPNHV-VYDALIDGFCKGGKLDEAQEVFSKMSEHGYSPNIYTYSS 736
Query: 552 LIDNFVKAGRLEVALELHKEVISASMSMAAKKNLYTSLIYSFSYASKIGHAFELFYDMIR 611
LID K RL++AL++ +++ S A +YT +I A K A++L M
Sbjct: 737 LIDRLFKDKRLDLALKVLSKML--ENSCAPNVVIYTEMIDGLCKADKTDEAYKLMLMMEE 796
Query: 612 DGVIPDLGTFVHLLMGLIRVRRWEEALQLSDSL 619
G P++ T+ ++ G + + ++L+L + +
Sbjct: 797 KGCYPNVVTYTAMIDGFGKAGKINKSLELLEQM 800
HSP 2 Score: 953.4 bits (2463), Expect = 1.4e-274
Identity = 459/632 (72.63%), Postives = 529/632 (83.70%), Query Frame = 1
Query: 1 MIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGE 60
MI EGCYPS +IF+SLVHAYCKS D+SYA+KLLKKM KC C+PGYVVYNILIG IC E
Sbjct: 359 MITEGCYPSPSIFSSLVHAYCKSGDYSYAFKLLKKMTKCGCQPGYVVYNILIGGICGNEE 418
Query: 61 LPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPD 120
LP ELAE AYNEML+AG +LNK+NV +FARCLCG GKFEKA +IHEMM GF+PD
Sbjct: 419 LPSSDVLELAENAYNEMLAAGVILNKINVSNFARCLCGVGKFEKACNIIHEMMRKGFIPD 478
Query: 121 TSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLD 180
TSTYS+VI LCNAS+VE AF LF EMK VVPDVYTYTILID F KAG+I+QAHNW D
Sbjct: 479 TSTYSKVIAHLCNASKVEKAFLLFGEMKKNCVVPDVYTYTILIDSFCKAGLIEQAHNWFD 538
Query: 181 EMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSG 240
EMV+ GC P VVTYT LIHAYLKA+KVS A+ELFE+M++KGC PNV+TYTALIDG+CK+G
Sbjct: 539 EMVKVGCAPNVVTYTALIHAYLKARKVSKADELFEMMLSKGCIPNVVTYTALIDGHCKAG 598
Query: 241 NIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLL 300
IEKACQIYARM +A+IPDVD+YFK+ ++ A+ PNV TYGALVDGLCKAHKVK+A DLL
Sbjct: 599 QIEKACQIYARMCTNAEIPDVDLYFKVVDSDAKTPNVFTYGALVDGLCKAHKVKEAHDLL 658
Query: 301 ETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKD 360
E M V GC+PN +VYDALIDGFCK KLDEAQEVF KM EHGY+PN+YTYSSLIDRLFKD
Sbjct: 659 EAMSVVGCKPNQVVYDALIDGFCKVGKLDEAQEVFSKMSEHGYSPNIYTYSSLIDRLFKD 718
Query: 361 KRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTY 420
KRLDL LKVLSKMLENSCAPN+VIYTEMIDGL K KTDEAYKLMLMMEEKGC PNVVTY
Sbjct: 719 KRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKAGKTDEAYKLMLMMEEKGCYPNVVTY 778
Query: 421 TAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQ 480
TAMIDGFGKAGK++K LEL EMGSKG APNF+TY+V+INHCC G LD+AY LLEEMKQ
Sbjct: 779 TAMIDGFGKAGKINKSLELLEEMGSKGVAPNFITYSVMINHCCIVGLLDKAYELLEEMKQ 838
Query: 481 TYWPKHVSSYCKVIEGYKREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVAL 540
TYWP+H++SY KVIEG+ +EFI+SLGLL+EV K+ S P+I +Y+VLI NF+KAGRLE+AL
Sbjct: 839 TYWPRHIASYRKVIEGFNKEFIMSLGLLDEVGKSESLPVIPVYRVLIYNFIKAGRLEMAL 898
Query: 541 ELHKEVISASMSMAAKKNLYTSLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLM 600
+LH E+ S S AA + Y +LI S S A K+ AFEL+ DM R G +P+L TF+HL+
Sbjct: 899 QLHHEIASFSQVPAAYCSTYNALIQSLSLARKVNKAFELYADMTRMGGVPELSTFIHLIK 958
Query: 601 GLIRVRRWEEALQLSDSLCQMDINWLRREDKP 633
GLI V +WEEALQLSDS CQMDI WL+ ++ P
Sbjct: 959 GLITVNKWEEALQLSDSFCQMDIQWLQEKETP 990
BLAST of Csa6G041170 vs. TrEMBL
Match:
A0A0D2RE91_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G019500 PE=4 SV=1)
HSP 1 Score: 245.0 bits (624), Expect = 2.5e-61
Identity = 176/637 (27.63%), Postives = 298/637 (46.78%), Query Frame = 1
Query: 12 IFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAE 71
+ N L+ YCK+ ++ A + L +++ KP Y L+ L + A
Sbjct: 198 LLNLLIGRYCKNGLWNMALEELGRLKDFGYKPSRATYCALVQVFLQADRL------DTAY 257
Query: 72 KAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFL 131
Y EM AG ++ + +A LC G++ +A +I + PDT+ Y+++I L
Sbjct: 258 LVYREMSDAGFHMDGYTLRCYAYSLCRMGQWREALTLIEK---EECKPDTAFYTKMISGL 317
Query: 132 CNASRVENAFFLFKEMKGTGVVPDVYTYTILI-DCFSKAGIIKQAHNWLDEMVRDGCEPT 191
C AS E A M+ +P+V TY +L+ C +K + + L+ M+ +GC P+
Sbjct: 318 CEASLFEEAMDFLNRMRANSCIPNVVTYRVLLCGCLNKRQL-GRCKRVLNMMITEGCYPS 377
Query: 192 VVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYA 251
+++L+HAY K+ S A +L + M GC P + Y LI G C
Sbjct: 378 PSIFSSLVHAYCKSGDYSYAFKLLKKMTKCGCQPGYVVYNILIGGIC------------- 437
Query: 252 RMRGDADIPDVDMYFKIKNNVAEK------PNVVTYGALVDGLCKAHKVKDARDLLETMF 311
G+ ++P D+ +N E N + LC K + A +++ M
Sbjct: 438 ---GNEELPSSDVLELAENAYNEMLAAGVILNKINVSNFARCLCGVGKFEKACNIIHEMM 497
Query: 312 VDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLD 371
G P+T Y +I C A+K+++A +F +M ++ P+VYTY+ LID K ++
Sbjct: 498 RKGFIPDTSTYSKVIAHLCNASKVEKAFLLFGEMKKNCVVPDVYTYTILIDSFCKAGLIE 557
Query: 372 LVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMI 431
+M++ CAPN+V YT +I K K +A +L MM KGC PNVVTYTA+I
Sbjct: 558 QAHNWFDEMVKVGCAPNVVTYTALIHAYLKARKVSKADELFEMMLSKGCIPNVVTYTALI 617
Query: 432 DGFGKAGKVDKCLEL----------------FREMGSKGCAPNFVTYTVLINHCCATGHL 491
DG KAG+++K ++ F+ + S PN TY L++ C +
Sbjct: 618 DGHCKAGQIEKACQIYARMCTNAEIPDVDLYFKVVDSDAKTPNVFTYGALVDGLCKAHKV 677
Query: 492 DEAYALLEEM-------KQTYWPKHVSSYCKVIEGYKREFILSLGLLEEVEKNGSAPIIL 551
EA+ LLE M Q + + +CKV + + + + S ++ ++G +P I
Sbjct: 678 KEAHDLLEAMSVVGCKPNQVVYDALIDGFCKVGKLDEAQEVFS-----KMSEHGYSPNIY 737
Query: 552 LYKVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNLYTSLIYSFSYASKIGHAFELFY 611
Y LID K RL++AL++ +++ S A +YT +I A K A++L
Sbjct: 738 TYSSLIDRLFKDKRLDLALKVLSKML--ENSCAPNVVIYTEMIDGLCKAGKTDEAYKLML 797
Query: 612 DMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQLSDSL 619
M G P++ T+ ++ G + + ++L+L + +
Sbjct: 798 MMEEKGCYPNVVTYTAMIDGFGKAGKINKSLELLEEM 801
HSP 2 Score: 55.1 bits (131), Expect = 3.7e-04
Identity = 53/265 (20.00%), Postives = 112/265 (42.26%), Query Frame = 1
Query: 342 GYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEA 401
GY+ ++SL+D L + K L ++ + + +I K + A
Sbjct: 156 GYSHTSAVFNSLLDLLESSNSDHVHEKFLLEIRNDDKEVLKKLLNLLIGRYCKNGLWNMA 215
Query: 402 YKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINH 461
+ + +++ G KP+ TY A++ F +A ++D ++REM G + T
Sbjct: 216 LEELGRLKDFGYKPSRATYCALVQVFLQADRLDTAYLVYREMSDAGFHMDGYTLRCYAYS 275
Query: 462 CCATGHLDEAYALLEEMK----QTYWPKHVSSYCKVIEGYKREFILSLGLLEEVEKNGSA 521
C G EA L+E+ + ++ K +S C+ F ++ L + N
Sbjct: 276 LCRMGQWREALTLIEKEECKPDTAFYTKMISGLCEA-----SLFEEAMDFLNRMRANSCI 335
Query: 522 PIILLYKVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNLYTSLIYSFSYASKIGHAF 581
P ++ Y+VL+ + +L + +I+ ++++SL++++ + +AF
Sbjct: 336 PNVVTYRVLLCGCLNKRQLGRCKRVLNMMITE--GCYPSPSIFSSLVHAYCKSGDYSYAF 395
Query: 582 ELFYDMIRDGVIPDLGTFVHLLMGL 603
+L M + G P + L+ G+
Sbjct: 396 KLLKKMTKCGCQPGYVVYNILIGGI 413
HSP 3 Score: 949.9 bits (2454), Expect = 1.6e-273
Identity = 458/621 (73.75%), Postives = 521/621 (83.90%), Query Frame = 1
Query: 1 MIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGE 60
MI EGCYPS IFNSL+HAYC+S D+SYAYKLLKKM C C+PGYVVYNILIG IC +
Sbjct: 345 MITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEK 404
Query: 61 LPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPD 120
LP ELAEKAY EML A VLNKVNV + ARCLCG GKFEKAY +I EMM GF+PD
Sbjct: 405 LPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPD 464
Query: 121 TSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLD 180
TSTYS+VIG LCNAS+V+NAF LF+EMK VVPDV+TYTILID F K G+++QA W D
Sbjct: 465 TSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFD 524
Query: 181 EMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSG 240
EMVRDGC P VVTYT LIHAYLKA+K+S ANELFE+M+++GC PNV+TYTALIDG+CKSG
Sbjct: 525 EMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSG 584
Query: 241 NIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLL 300
IEKACQIYARMRG+ADIPDVDMYFKI + PN+ TYGALVDGLCKAHKVK+ARDLL
Sbjct: 585 QIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLL 644
Query: 301 ETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKD 360
+ M V+GCEPN IVYDALIDGFCK KLDEAQ VF KM E GY PNVYTYSSLIDRLFKD
Sbjct: 645 DVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKD 704
Query: 361 KRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTY 420
KRLDL LKVLS+MLENSCAPN++IYTEMIDGL KV KTDEAY+LM MMEEKGC PNVVTY
Sbjct: 705 KRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTY 764
Query: 421 TAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQ 480
TAMIDGFGKAGKVDKCLEL R+MG+KGCAPNFVTY VLINHCCA G LD+A+ LL+EMKQ
Sbjct: 765 TAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQ 824
Query: 481 TYWPKHVSSYCKVIEGYKREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVAL 540
TYWPKH++ Y KVIEG+ REFI+SLGLL+E+ +N + PII Y++LID+F KAGRLE+AL
Sbjct: 825 TYWPKHMAGYRKVIEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELAL 884
Query: 541 ELHKEVISASMSMAAKKNLYTSLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLM 600
ELHKE+ S + AA K+LY+SLI S S ASK+ AFEL+ DMI+ G IP+L F +L+
Sbjct: 885 ELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVK 944
Query: 601 GLIRVRRWEEALQLSDSLCQM 622
GLIR+ RWEEALQLSD +CQM
Sbjct: 945 GLIRINRWEEALQLSDCICQM 965
BLAST of Csa6G041170 vs. TrEMBL
Match:
F6I3S9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0124g00470 PE=4 SV=1)
HSP 1 Score: 239.2 bits (609), Expect = 1.4e-59
Identity = 169/580 (29.14%), Postives = 273/580 (47.07%), Query Frame = 1
Query: 12 IFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAE 71
I+ ++ C++ F A L +M C P V Y IL+ +L +
Sbjct: 286 IYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQL------GRCK 345
Query: 72 KAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFL 131
+ + M++ G ++ S C G + AYK++ +M G P Y+ +IG +
Sbjct: 346 RILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGI 405
Query: 132 CNASR------VENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRD 191
C + +E A + EM VV + + L C AG ++A++ + EM+
Sbjct: 406 CGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSK 465
Query: 192 GCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKA 251
G P TY+ +I A KV A LFE M + P+V TYT LID +CK G +++A
Sbjct: 466 GFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQA 525
Query: 252 CQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFV 311
+ + M +++ A PNVVTY AL+ KA K+ A +L E M
Sbjct: 526 RKWFDEM--------------VRDGCA--PNVVTYTALIHAYLKARKMSSANELFEMMLS 585
Query: 312 DGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDL 371
+GC PN + Y ALIDG CK+ ++++A +++ +M + P+V Y + D +D
Sbjct: 586 EGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRD----- 645
Query: 372 VLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMID 431
PNI Y ++DGL K K EA L+ +M +GC+PN + Y A+ID
Sbjct: 646 --------------PNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALID 705
Query: 432 GFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPK 491
GF K GK+D+ +F +M +G PN TY+ LI+ LD A +L M +
Sbjct: 706 GFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAP 765
Query: 492 HVSSYCKVIEGYKR--EFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALELH 551
+V Y ++I+G + + + L+ +E+ G P ++ Y +ID F KAG+++ LEL
Sbjct: 766 NVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELM 822
Query: 552 KEVISASMSMAAKKNLYTSLIYSFSYASKIGHAFELFYDM 584
+++ + A Y LI A + A +L +M
Sbjct: 826 RQM--GAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEM 822
HSP 2 Score: 212.6 bits (540), Expect = 1.4e-51
Identity = 165/603 (27.36%), Postives = 267/603 (44.28%), Query Frame = 1
Query: 12 IFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAE 71
+ N L+ C++ ++ A + L +++ KP + YN L+ L + A
Sbjct: 184 LLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRL------DTAY 243
Query: 72 KAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFL 131
+ EM +G ++ + F LC G++ +A +I + F DT Y+++I L
Sbjct: 244 LVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEK---EEFKLDTVIYTQMISGL 303
Query: 132 CNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTV 191
C AS E A M+ + +P+V TY IL+ + + + L M+ +GC P+
Sbjct: 304 CEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSR 363
Query: 192 VTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYAR 251
+ +LIHAY ++ S A +L + M GC P + Y LI G C
Sbjct: 364 RIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGIC-------------- 423
Query: 252 MRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPN 311
G+ +P +D+ +AEK YG ++D AH V N
Sbjct: 424 --GNEKLPSLDVL-----ELAEK----AYGEMLD----AHVVL----------------N 483
Query: 312 TIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLS 371
+ L C A K ++A + +M+ G+ P+ TYS +I L ++D +
Sbjct: 484 KVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFE 543
Query: 372 KMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAG 431
+M N P++ YT +ID KV +A K M GC PNVVTYTA+I + KA
Sbjct: 544 EMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKAR 603
Query: 432 KVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYC 491
K+ ELF M S+GC PN VTYT LI+ C +G +++A + M+ V Y
Sbjct: 604 KMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYF 663
Query: 492 KVIEGYKREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALELHKEVISASM 551
K+ +G R+ P I Y L+D KA +++ A +L +V+S
Sbjct: 664 KIDDGNIRD-----------------PNIFTYGALVDGLCKAHKVKEARDL-LDVMSVE- 713
Query: 552 SMAAKKNLYTSLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEA 611
+Y +LI F K+ A +F M G P++ T+ L+ L + +R + A
Sbjct: 724 GCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLA 713
Query: 612 LQL 615
L++
Sbjct: 784 LKV 713
HSP 3 Score: 945.7 bits (2443), Expect = 3.0e-272
Identity = 455/632 (71.99%), Postives = 525/632 (83.07%), Query Frame = 1
Query: 1 MIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGE 60
MI EGCYPS +IFNSLVHAYCKS D+SYA+KLLKKM KC C+PGYVVYNILIG IC E
Sbjct: 1304 MITEGCYPSPSIFNSLVHAYCKSGDYSYAFKLLKKMTKCGCQPGYVVYNILIGGICGNEE 1363
Query: 61 LPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPD 120
LP ELAE AY EML+AG +LNK+NV +FARCLCG GKFEKA +IHEMM GF+PD
Sbjct: 1364 LPSSDVLELAENAYGEMLAAGVILNKINVSNFARCLCGVGKFEKACNIIHEMMRKGFIPD 1423
Query: 121 TSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLD 180
TSTYS+VI LCNAS+VE AF LF EMK GVVPDVYTYTILID F KA +I+QAHNW +
Sbjct: 1424 TSTYSKVIAHLCNASKVEKAFLLFGEMKKNGVVPDVYTYTILIDSFCKADLIEQAHNWFN 1483
Query: 181 EMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSG 240
EMV+ GC P VVTYT LIHAYLKA+KVS A+ELFE+M++KGC PNV+TYTALIDG+CK+G
Sbjct: 1484 EMVKVGCAPNVVTYTALIHAYLKARKVSKADELFEMMLSKGCIPNVVTYTALIDGHCKAG 1543
Query: 241 NIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLL 300
IEKACQIYARM +A+IPDVD+YFK+ ++ A+ PNV TYGAL+DGLCKAHKVK+A DLL
Sbjct: 1544 QIEKACQIYARMCTNAEIPDVDLYFKVVDSDAKMPNVFTYGALMDGLCKAHKVKEAHDLL 1603
Query: 301 ETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKD 360
E M V GC+PN +VYDALIDGFCK KLDEAQEVF KM EHGY+PN+YTYSSLIDRLFKD
Sbjct: 1604 EAMSVVGCKPNQVVYDALIDGFCKVGKLDEAQEVFSKMSEHGYSPNIYTYSSLIDRLFKD 1663
Query: 361 KRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTY 420
KRLDL LKVLSKMLENSCAPN+VIYTEMIDGL K KTDEAYKLMLMMEEKGC PNVVTY
Sbjct: 1664 KRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKSGKTDEAYKLMLMMEEKGCYPNVVTY 1723
Query: 421 TAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQ 480
TAMIDGFGKAGK+DK LEL +MGSKG APNF+TY+VLINHCC G LD+AY LLEEMKQ
Sbjct: 1724 TAMIDGFGKAGKIDKSLELLEQMGSKGVAPNFITYSVLINHCCIVGLLDKAYELLEEMKQ 1783
Query: 481 TYWPKHVSSYCKVIEGYKREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVAL 540
TYWP+H++ Y KVIEG+ +EFI+SLG+L+E K+ S +I +Y+VLI NF+KAGRLE+AL
Sbjct: 1784 TYWPRHIAGYRKVIEGFNKEFIMSLGILDEAGKSESLSVIPVYRVLIYNFIKAGRLEMAL 1843
Query: 541 ELHKEVISASMSMAAKKNLYTSLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLM 600
+LH E+ S S AA + Y +LI S S A K+ AFEL+ DM R G +P+L TF+HL+
Sbjct: 1844 QLHHEIASFSQVPAAYCSTYNALIESLSLARKVNKAFELYADMTRMGGVPELSTFIHLIK 1903
Query: 601 GLIRVRRWEEALQLSDSLCQMDINWLRREDKP 633
GLI V +WEEALQLSDS CQMDI WLR ++ P
Sbjct: 1904 GLITVNKWEEALQLSDSFCQMDIQWLREKETP 1935
BLAST of Csa6G041170 vs. TAIR10
Match:
AT1G06710.1 (AT1G06710.1 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 822.0 bits (2122), Expect = 2.5e-238
Identity = 400/629 (63.59%), Postives = 487/629 (77.42%), Query Frame = 1
Query: 1 MIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGE 60
M+ EGCYPS IFNSLVHAYC S D SYAYKLLKKM KC PGYVVYNILIGSIC +
Sbjct: 363 MMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKD 422
Query: 61 LPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPD 120
+LAEKAY+EML+AG VLNK+NV SF RCLC GK+EKA+ VI EM+G GF+PD
Sbjct: 423 SLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPD 482
Query: 121 TSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLD 180
TSTYS+V+ +LCNAS++E AF LF+EMK G+V DVYTYTI++D F KAG+I+QA W +
Sbjct: 483 TSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFN 542
Query: 181 EMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSG 240
EM GC P VVTYT LIHAYLKAKKVS ANELFE M+++GC PN++TY+ALIDG+CK+G
Sbjct: 543 EMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAG 602
Query: 241 NIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLL 300
+EKACQI+ RM G D+PDVDMYFK ++ +E+PNVVTYGAL+DG CK+H+V++AR LL
Sbjct: 603 QVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLL 662
Query: 301 ETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKD 360
+ M ++GCEPN IVYDALIDG CK KLDEAQEV +M EHG+ +YTYSSLIDR FK
Sbjct: 663 DAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKV 722
Query: 361 KRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTY 420
KR DL KVLSKMLENSCAPN+VIYTEMIDGL KV KTDEAYKLM MMEEKGC+PNVVTY
Sbjct: 723 KRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTY 782
Query: 421 TAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQ 480
TAMIDGFG GK++ CLEL MGSKG APN+VTY VLI+HCC G LD A+ LLEEMKQ
Sbjct: 783 TAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQ 842
Query: 481 TYWPKHVSSYCKVIEGYKREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVAL 540
T+WP H + Y KVIEG+ +EFI SLGLL+E+ ++ +AP + +Y++LIDN +KA RLE+AL
Sbjct: 843 THWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMAL 902
Query: 541 ELHKEVISASMSMAAKKNLYTSLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLM 600
L +EV + S ++ + Y SLI S A+K+ AF+LF +M + GVIP++ +F L+
Sbjct: 903 RLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIK 962
Query: 601 GLIRVRRWEEALQLSDSLCQMDINWLRRE 630
GL R + EAL L D + M+I W+ +
Sbjct: 963 GLFRNSKISEALLLLDFISHMEIQWIEEK 991
HSP 2 Score: 234.6 bits (597), Expect = 1.7e-61
Identity = 174/635 (27.40%), Postives = 287/635 (45.20%), Query Frame = 1
Query: 14 NSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKA 73
N LV +C++ FS A + L +++ +P YN LI + L + A
Sbjct: 204 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRL------DSASLI 263
Query: 74 YNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCN 133
+ EM A ++ + FA LC GK+ +A ++ FVPDT Y+++I LC
Sbjct: 264 HREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVET---ENFVPDTVFYTKLISGLCE 323
Query: 134 ASRVENAFFLFKEMKGTGVVPDVYTY-TILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVV 193
AS E A M+ T +P+V TY T+L C +K + + L+ M+ +GC P+
Sbjct: 324 ASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQ-LGRCKRVLNMMMMEGCYPSPK 383
Query: 194 TYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARM 253
+ +L+HAY + S A +L + M+ G P + Y LI C
Sbjct: 384 IFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSIC--------------- 443
Query: 254 RGDADIPDVDMYFKIKNNVAEK------PNVVTYGALVDGLCKAHKVKDARDLLETMFVD 313
GD D + D+ + +E N + + LC A K + A ++ M
Sbjct: 444 -GDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQ 503
Query: 314 GCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLV 373
G P+T Y +++ C A+K++ A +F +M G +VYTY+ ++D K ++
Sbjct: 504 GFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQA 563
Query: 374 LKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDG 433
K ++M E C PN+V YT +I K K A +L M +GC PN+VTY+A+IDG
Sbjct: 564 RKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDG 623
Query: 434 FGKAGKVDKCLELFREM-GSKGC---------------APNFVTYTVLINHCCATGHLDE 493
KAG+V+K ++F M GSK PN VTY L++ C + ++E
Sbjct: 624 HCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEE 683
Query: 494 AYALLEEMKQTYWPKHVSSYCKVIEGYKREFILSLGLLEEVE-------KNGSAPIILLY 553
A LL+ M + Y +I+G + +G L+E + ++G + Y
Sbjct: 684 ARKLLDAMSMEGCEPNQIVYDALIDG-----LCKVGKLDEAQEVKTEMSEHGFPATLYTY 743
Query: 554 KVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNLYTSLIYSFSYASKIGHAFELFYDM 613
LID + K R ++A ++ +++ S A +YT +I K A++L M
Sbjct: 744 SSLIDRYFKVKRQDLASKVLSKML--ENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMM 803
Query: 614 IRDGVIPDLGTFVHLLMGLIRVRRWEEALQLSDSL 619
G P++ T+ ++ G + + E L+L + +
Sbjct: 804 EEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERM 805
BLAST of Csa6G041170 vs. TAIR10
Match:
AT3G06920.1 (AT3G06920.1 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 254.6 bits (649), Expect = 1.6e-67
Identity = 171/608 (28.12%), Postives = 298/608 (49.01%), Query Frame = 1
Query: 8 PSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTF 67
P+++ + +L+ A+ + L ++M++ +P ++ LI G + ++
Sbjct: 166 PAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALS- 225
Query: 68 ELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEV 127
L ++ + L A VL V + SF + GK + A+K HE+ NG PD TY+ +
Sbjct: 226 -LLDEMKSSSLDADIVLYNVCIDSFGKV----GKVDMAWKFFHEIEANGLKPDEVTYTSM 285
Query: 128 IGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGC 187
IG LC A+R++ A +F+ ++ VP Y Y +I + AG +A++ L+ G
Sbjct: 286 IGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGS 345
Query: 188 EPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQ 247
P+V+ Y ++ K KV A ++FE M K PN+ TY LID C++G ++ A +
Sbjct: 346 IPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAFE 405
Query: 248 IYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDG 307
+ M+ PNV T +VD LCK+ K+ +A + E M
Sbjct: 406 LRDSMQ----------------KAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKV 465
Query: 308 CEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVL 367
C P+ I + +LIDG K ++D+A +V+ KM++ N Y+SLI F R +
Sbjct: 466 CTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGH 525
Query: 368 KVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGF 427
K+ M+ +C+P++ + +D + K + ++ + ++ + P+ +Y+ +I G
Sbjct: 526 KIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGL 585
Query: 428 GKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHV 487
KAG ++ ELF M +GC + Y ++I+ C G +++AY LLEEMK + V
Sbjct: 586 IKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTV 645
Query: 488 SSYCKVIEGYKREFIL--SLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALELHKE 547
+Y VI+G + L + L EE + +++Y LID F K GR++ A + +E
Sbjct: 646 VTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEE 705
Query: 548 VISASMSMAAKKNLYT--SLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLMGLI 607
++ ++ NLYT SL+ + A +I A F M P+ T+ L+ GL
Sbjct: 706 LMQKGLT----PNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLC 746
Query: 608 RVRRWEEA 612
+VR++ +A
Sbjct: 766 KVRKFNKA 746
HSP 2 Score: 164.5 bits (415), Expect = 2.2e-40
Identity = 123/469 (26.23%), Postives = 210/469 (44.78%), Query Frame = 1
Query: 127 VIGFLCNASRVENAFFLFKEMKGTGVVPDV-YTYTILIDCFSKAGIIKQAHNWLDEMVRD 186
VIG L V A F+ + +P +Y L+ ++ L EM
Sbjct: 68 VIGVLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVA 127
Query: 187 GCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKA 246
G P+V T ++ +KA K+ ++ ++M P YT LI + + +
Sbjct: 128 GFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMM 187
Query: 247 CQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFV 306
++ +M+ + +P V + L+ G K +V A LL+ M
Sbjct: 188 LTLFQQMQ----------------ELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKS 247
Query: 307 DGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDL 366
+ + ++Y+ ID F K K+D A + FH++ +G P+ TY+S+I L K RLD
Sbjct: 248 SSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDE 307
Query: 367 VLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMID 426
+++ + +N P Y MI G K DEAY L+ KG P+V+ Y ++
Sbjct: 308 AVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILT 367
Query: 427 GFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPK 486
K GKVD+ L++F EM K APN TY +LI+ C G LD A+ L + M++
Sbjct: 368 CLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFP 427
Query: 487 HVSSYCKVIEGYKREFIL--SLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALELH 546
+V + +++ + L + + EE++ P + + LID K GR++ A +++
Sbjct: 428 NVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVY 487
Query: 547 KEVISASMSMAAKKNLYTSLIYSFSYASKIGHAFELFYDMIRDGVIPDL 593
++++ + +YTSLI +F + +++ DMI PDL
Sbjct: 488 EKMLDS--DCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDL 517
HSP 3 Score: 112.5 bits (280), Expect = 9.8e-25
Identity = 85/338 (25.15%), Postives = 142/338 (42.01%), Query Frame = 1
Query: 8 PSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTF 67
P ++ L+H K+ + Y+L M++ C YNI+I C G++
Sbjct: 550 PDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKV------ 609
Query: 68 ELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEK---AYKVIHEMMGNGFVPDTSTY 127
KAY + T + VV++ + G K ++ AY + E + Y
Sbjct: 610 ---NKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIY 669
Query: 128 SEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVR 187
S +I R++ A+ + +E+ G+ P++YT+ L+D KA I +A M
Sbjct: 670 SSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKE 729
Query: 188 DGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEK 247
C P VTY LI+ K +K + A ++ M +G P+ I+YT +I G K+GNI +
Sbjct: 730 LKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAE 789
Query: 248 ACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMF 307
A ++ R + + +PD Y A+++GL ++ DA L E
Sbjct: 790 AGALFDRFKANGGVPD----------------SACYNAMIEGLSNGNRAMDAFSLFEETR 849
Query: 308 VDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHG 343
G + L+D K L++A V + E G
Sbjct: 850 RRGLPIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRETG 862
BLAST of Csa6G041170 vs. TAIR10
Match:
AT5G65560.1 (AT5G65560.1 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 254.2 bits (648), Expect = 2.1e-67
Identity = 188/592 (31.76%), Postives = 282/592 (47.64%), Query Frame = 1
Query: 25 DFSYAYKLLKKM---EKCECKPGYVV--YNILIGSICSGGELPGPVTFELAEKAYNEMLS 84
D Y L +KM E+ E K ++ YN L+ S+ G + + ++ Y EML
Sbjct: 158 DALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLV------DEMKQVYMEMLE 217
Query: 85 AGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVEN 144
N C G E+A + + +++ G PD TY+ +I C +++
Sbjct: 218 DKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDS 277
Query: 145 AFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIH 204
AF +F EM G + YT LI A I +A + +M D C PTV TYT LI
Sbjct: 278 AFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIK 337
Query: 205 AYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIP 264
+ +++ S A L + M G PN+ TYT LID C EKA ++ +M +P
Sbjct: 338 SLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMP 397
Query: 265 DVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALI 324
NV+TY AL++G CK ++DA D++E M PNT Y+ LI
Sbjct: 398 ----------------NVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELI 457
Query: 325 DGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCA 384
G+CK+ + +A V +KM+E P+V TY+SLID + D ++LS M +
Sbjct: 458 KGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLV 517
Query: 385 PNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLEL 444
P+ YT MID L K + +EA L +E+KG PNVV YTA+IDG+ KAGKVD+ +
Sbjct: 518 PDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLM 577
Query: 445 FREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKR 504
+M SK C PN +T+ LI+ CA G L EA L E+M + VS+ +I +
Sbjct: 578 LEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLK 637
Query: 505 --EFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALELHKEVISASM---SMA 564
+F + +++ +G+ P Y I + + GRL L E + A M ++
Sbjct: 638 DGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRL-----LDAEDMMAKMRENGVS 697
Query: 565 AKKNLYTSLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVR 607
Y+SLI + + AF++ M G P TF+ L+ L+ ++
Sbjct: 698 PDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMK 721
HSP 2 Score: 249.6 bits (636), Expect = 5.1e-66
Identity = 175/620 (28.23%), Postives = 281/620 (45.32%), Query Frame = 1
Query: 1 MIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGE 60
M+ + P+ +N +V+ YCK + A + + K+ + P + Y LI C +
Sbjct: 209 MLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKD 268
Query: 61 LPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPD 120
L + A K +NEM G N+V LC + ++A + +M + P
Sbjct: 269 L------DSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPT 328
Query: 121 TSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLD 180
TY+ +I LC + R A L KEM+ TG+ P+++TYT+LID ++A L
Sbjct: 329 VRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLG 388
Query: 181 EMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSG 240
+M+ G P V+TY LI+ Y K + A ++ ELM ++ PN TY LI GYCKS
Sbjct: 389 QMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKS- 448
Query: 241 NIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLL 300
N+ KA + +M +PD VVTY +L+DG C++ A LL
Sbjct: 449 NVHKAMGVLNKMLERKVLPD----------------VVTYNSLIDGQCRSGNFDSAYRLL 508
Query: 301 ETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKD 360
M G P+ Y ++ID CK+ +++EA ++F + + G NPNV Y++LID K
Sbjct: 509 SLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKA 568
Query: 361 KRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTY 420
++D +L KML +C PN + + +I GL K EA L M + G +P V T
Sbjct: 569 GKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTD 628
Query: 421 TAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQ 480
T +I K G D F++M S G P+ TYT I C G L +A ++ +M++
Sbjct: 629 TILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRE 688
Query: 481 TYWPKHVSSYCKVIEGY--KREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEV 540
+ +Y +I+GY + + +L+ + G P + LI + ++
Sbjct: 689 NGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLE------ 748
Query: 541 ALELHKEVISASMSMAAKKNLYTSLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHL 600
M +K L + S + EL M+ V P+ ++ L
Sbjct: 749 ------------MKYGKQKGSEPELC-AMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKL 786
Query: 601 LMGLIRVRRWEEALQLSDSL 619
++G+ V A ++ D +
Sbjct: 809 ILGICEVGNLRVAEKVFDHM 786
HSP 3 Score: 242.7 bits (618), Expect = 6.3e-64
Identity = 179/623 (28.73%), Postives = 278/623 (44.62%), Query Frame = 1
Query: 1 MIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGE 60
M +GC + + L+H C + A L KM+ EC P Y +LI S+C
Sbjct: 279 MPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGS-- 338
Query: 61 LPGPVTFELAEKAYN---EMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGF 120
E +A N EM G N LC KFEKA +++ +M+ G
Sbjct: 339 -------ERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGL 398
Query: 121 VPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHN 180
+P+ TY+ +I C +E+A + + M+ + P+ TY LI + K+ + K A
Sbjct: 399 MPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHK-AMG 458
Query: 181 WLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYC 240
L++M+ P VVTY +LI ++ A L LM +G P+ TYT++ID C
Sbjct: 459 VLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLC 518
Query: 241 KSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDAR 300
KS +E+AC ++ + PNVV Y AL+DG CKA KV +A
Sbjct: 519 KSKRVEEACDLFDSLE----------------QKGVNPNVVMYTALIDGYCKAGKVDEAH 578
Query: 301 DLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRL 360
+LE M C PN++ ++ALI G C KL EA + KMV+ G P V T + LI RL
Sbjct: 579 LMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRL 638
Query: 361 FKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNV 420
KD D +ML + P+ YT I + + +A +M M E G P++
Sbjct: 639 LKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDL 698
Query: 421 VTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEE 480
TY+++I G+G G+ + ++ + M GC P+ T+ LI H L E
Sbjct: 699 FTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKH-------------LLE 758
Query: 481 MKQTYWPKHVSSYCKVIEGYKREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLE 540
MK C + EF + LLE++ ++ P Y+ LI + G L
Sbjct: 759 MKYGKQKGSEPELCAM--SNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLR 818
Query: 541 VALELHKEVISASMSMAAKKNLYTSLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVH 600
VA ++ + + + ++ + ++ +L+ K A ++ DMI G +P L +
Sbjct: 819 VAEKVF-DHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKV 859
Query: 601 LLMGLIRVRRWEEALQLSDSLCQ 621
L+ GL + E + +L Q
Sbjct: 879 LICGLYKKGEKERGTSVFQNLLQ 859
HSP 4 Score: 168.7 bits (426), Expect = 1.2e-41
Identity = 123/463 (26.57%), Postives = 206/463 (44.49%), Query Frame = 1
Query: 1 MIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGE 60
M+ P +NSL+ C+S +F AY+LL M P Y +I S+C
Sbjct: 453 MLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKR 512
Query: 61 LPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPD 120
+ E A ++ + G N V + C GK ++A+ ++ +M+ +P+
Sbjct: 513 V------EEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPN 572
Query: 121 TSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLD 180
+ T++ +I LC +++ A L ++M G+ P V T TILI K G A++
Sbjct: 573 SLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQ 632
Query: 181 EMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSG 240
+M+ G +P TYTT I Y + ++ A ++ M G P++ TY++LI GY G
Sbjct: 633 QMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLG 692
Query: 241 NIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKD---AR 300
A + RMR P + + ++ E G+ + LC + +
Sbjct: 693 QTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPE-LCAMSNMMEFDTVV 752
Query: 301 DLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVF-HKMVEHGYNPNVYTYSSLIDR 360
+LLE M PN Y+ LI G C+ L A++VF H G +P+ +++L+
Sbjct: 753 ELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSC 812
Query: 361 LFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPN 420
K K+ + KV+ M+ P + +I GL K + + + + + G +
Sbjct: 813 CCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYED 872
Query: 421 VVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLI 460
+ + +IDG GK G V+ ELF M GC + TY++LI
Sbjct: 873 ELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLI 908
HSP 5 Score: 159.1 bits (401), Expect = 9.1e-39
Identity = 134/524 (25.57%), Postives = 233/524 (44.47%), Query Frame = 1
Query: 8 PSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTF 67
P+ +N L+ YCKS+ A +L KM + + P V YN LI C G F
Sbjct: 426 PNTRTYNELIKGYCKSNVHK-AMGVLNKMLERKVLPDVVTYNSLIDGQCRSGN------F 485
Query: 68 ELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEV 127
+ A + + M G V ++ S LC + E+A + + G P+ Y+ +
Sbjct: 486 DSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTAL 545
Query: 128 IGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGC 187
I C A +V+ A + ++M +P+ T+ LI G +K+A ++MV+ G
Sbjct: 546 IDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGL 605
Query: 188 EPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQ 247
+PTV T T LIH LK A F+ M++ G P+ TYT I YC+ G + A
Sbjct: 606 QPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAED 665
Query: 248 IYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDG 307
+ A+MR +N V+ P++ TY +L+ G + A D+L+ M G
Sbjct: 666 MMAKMR--------------ENGVS--PDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTG 725
Query: 308 CEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVL 367
CEP+ + +LI + + K + G P + S++++ D V+
Sbjct: 726 CEPSQHTFLSLIKHLLEMK--------YGK--QKGSEPELCAMSNMME-------FDTVV 785
Query: 368 KVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLM-LMMEEKGCKPNVVTYTAMIDG 427
++L KM+E+S PN Y ++I G+ +V A K+ M +G P+ + + A++
Sbjct: 786 ELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSC 845
Query: 428 FGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKH 487
K K ++ ++ +M G P + VLI G + ++ + + Q + +
Sbjct: 846 CCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYED 905
Query: 488 VSSYCKVIEGYKREFILS--LGLLEEVEKNGSAPIILLYKVLID 529
++ +I+G ++ ++ L +EKNG Y +LI+
Sbjct: 906 ELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIE 909
BLAST of Csa6G041170 vs. TAIR10
Match:
AT1G09900.1 (AT1G09900.1 Pentatricopeptide repeat (PPR-like) superfamily protein)
HSP 1 Score: 253.4 bits (646), Expect = 3.6e-67
Identity = 149/490 (30.41%), Postives = 242/490 (49.39%), Query Frame = 1
Query: 66 TFELAE--KAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTST 125
T EL E K M+ G V + + + R C GK KA K++ + G+G VPD T
Sbjct: 115 TGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVIT 174
Query: 126 YSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMV 185
Y+ +I C A + NA + M V PDV TY ++ +G +KQA LD M+
Sbjct: 175 YNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRML 234
Query: 186 RDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIE 245
+ C P V+TYT LI A + V A +L + M +GC P+V+TY L++G CK G ++
Sbjct: 235 QRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLD 294
Query: 246 KACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETM 305
+A + D+P +PNV+T+ ++ +C + DA LL M
Sbjct: 295 EAIKFLN------DMPSSGC----------QPNVITHNIILRSMCSTGRWMDAEKLLADM 354
Query: 306 FVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRL 365
G P+ + ++ LI+ C+ L A ++ KM +HG PN +Y+ L+ K+K++
Sbjct: 355 LRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKM 414
Query: 366 DLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAM 425
D ++ L +M+ C P+IV Y M+ L K K ++A +++ + KGC P ++TY +
Sbjct: 415 DRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTV 474
Query: 426 IDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYW 485
IDG KAGK K ++L EM +K P+ +TY+ L+ G +DEA E ++
Sbjct: 475 IDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGI 534
Query: 486 PKHVSSYCKVIEGY--KREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALE 545
+ ++ ++ G R+ ++ L + G P Y +LI+ G + ALE
Sbjct: 535 RPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALE 585
Query: 546 LHKEVISASM 552
L E+ + +
Sbjct: 595 LLNELCNKGL 585
HSP 2 Score: 242.7 bits (618), Expect = 6.3e-64
Identity = 136/478 (28.45%), Postives = 235/478 (49.16%), Query Frame = 1
Query: 1 MIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGE 60
M+ G P +L+ +C+ A K+L+ +E P + YN++I C GE
Sbjct: 128 MVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGE 187
Query: 61 LPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPD 120
+ ++ ++++ T+L R LC GK ++A +V+ M+ PD
Sbjct: 188 INNALSVLDRMSVSPDVVTYNTIL---------RSLCDSGKLKQAMEVLDRMLQRDCYPD 247
Query: 121 TSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLD 180
TY+ +I C S V +A L EM+ G PDV TY +L++ K G + +A +L+
Sbjct: 248 VITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLN 307
Query: 181 EMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSG 240
+M GC+P V+T+ ++ + + A +L M+ KG P+V+T+ LI+ C+ G
Sbjct: 308 DMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKG 367
Query: 241 NIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLL 300
+ +A I +M +PN ++Y L+ G CK K+ A + L
Sbjct: 368 LLGRAIDILEKMPQHGC----------------QPNSLSYNPLLHGFCKEKKMDRAIEYL 427
Query: 301 ETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKD 360
E M GC P+ + Y+ ++ CK K+++A E+ +++ G +P + TY+++ID L K
Sbjct: 428 ERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKA 487
Query: 361 KRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTY 420
+ +K+L +M P+ + Y+ ++ GLS+ K DEA K E G +PN VT+
Sbjct: 488 GKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTF 547
Query: 421 TAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEM 479
+++ G K+ + D+ ++ M ++GC PN +YT+LI G EA LL E+
Sbjct: 548 NSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNEL 580
HSP 3 Score: 107.8 bits (268), Expect = 2.4e-23
Identity = 74/269 (27.51%), Postives = 135/269 (50.19%), Query Frame = 1
Query: 356 RLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKP 415
++ + L+ K L M+ + P+I+ T +I G ++ KT +A K++ ++E G P
Sbjct: 111 QMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVP 170
Query: 416 NVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALL 475
+V+TY MI G+ KAG+++ L + M +P+ VTY ++ C +G L +A +L
Sbjct: 171 DVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVL 230
Query: 476 EEMKQTYWPKHVSSYCKVIEGYKREFIL--SLGLLEEVEKNGSAPIILLYKVLIDNFVKA 535
+ M Q V +Y +IE R+ + ++ LL+E+ G P ++ Y VL++ K
Sbjct: 231 DRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKE 290
Query: 536 GRLEVALELHKEVISASMSMAAKKNLYTS--LIYSFSYASKIGHAFELFYDMIRDGVIPD 595
GRL+ A++ ++ S+ + N+ T ++ S + A +L DM+R G P
Sbjct: 291 GRLDEAIKFLNDMPSS----GCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPS 350
Query: 596 LGTFVHLLMGLIRVRRWEEALQLSDSLCQ 621
+ TF L+ L R A+ + + + Q
Sbjct: 351 VVTFNILINFLCRKGLLGRAIDILEKMPQ 372
BLAST of Csa6G041170 vs. TAIR10
Match:
AT1G62670.1 (AT1G62670.1 rna processing factor 2)
HSP 1 Score: 252.3 bits (643), Expect = 7.9e-67
Identity = 157/528 (29.73%), Postives = 262/528 (49.62%), Query Frame = 1
Query: 88 NVVSFARCLCGFGKFEKAYKVIH--EMMGNGFVPDTS-TYSEVIGFLCNASRVENAFFLF 147
+++ F++ L K K VI E M N +P TYS +I C S++ A +
Sbjct: 80 SIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVL 139
Query: 148 KEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKA 207
+M G P++ T + L++ + + I +A +D+M G +P VT+ TLIH
Sbjct: 140 GKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLH 199
Query: 208 KKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMY 267
K S A L + M+AKGC P+++TY +++G CK G D D+
Sbjct: 200 NKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRG-------------------DTDLA 259
Query: 268 FKIKNNVAE---KPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDG 327
F + N + + +P V+ Y ++DGLCK + DA +L + M G PN + Y +LI
Sbjct: 260 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 319
Query: 328 FCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPN 387
C + +A + M+E NP+V+T+S+LID K+ +L K+ +M++ S P+
Sbjct: 320 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 379
Query: 388 IVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFR 447
IV Y+ +I+G + DEA ++ M K C P+VVTY +I GF K +V++ +E+FR
Sbjct: 380 IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFR 439
Query: 448 EMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKREF 507
EM +G N VTY +LI G D A + +EM P ++ +Y +++G +
Sbjct: 440 EMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNG 499
Query: 508 IL--SLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALELHKEVISASMSMAAKKN- 567
L ++ + E ++++ P I Y ++I+ KAG++E +L ++S+ K
Sbjct: 500 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLF-----CNLSLKGVKPD 559
Query: 568 --LYTSLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLMGLIR 605
Y ++I F A LF +M DG +P+ G + L+ +R
Sbjct: 560 VVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLR 583
HSP 2 Score: 240.0 bits (611), Expect = 4.1e-63
Identity = 144/482 (29.88%), Postives = 236/482 (48.96%), Query Frame = 1
Query: 1 MIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSIC---S 60
M+ G P+ +SL++ YC S S A L+ +M +P V +N LI +
Sbjct: 142 MMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNK 201
Query: 61 GGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGF 120
E + +A+ ++++ G V+N LC G + A+ ++++M
Sbjct: 202 ASEAMALIDRMVAKGCQPDLVTYGVVVNG---------LCKRGDTDLAFNLLNKMEQGKL 261
Query: 121 VPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHN 180
P Y+ +I LC +++A LFKEM+ G+ P+V TY+ LI C G A
Sbjct: 262 EPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASR 321
Query: 181 WLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYC 240
L +M+ P V T++ LI A++K K+ A +L++ M+ + P+++TY++LI+G+C
Sbjct: 322 LLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFC 381
Query: 241 KSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDAR 300
+++A Q++ M PDV VTY L+ G CK +V++
Sbjct: 382 MHDRLDEAKQMFEFMVSKHCFPDV----------------VTYNTLIKGFCKYKRVEEGM 441
Query: 301 DLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRL 360
++ M G NT+ Y+ LI G +A D AQE+F +MV G PN+ TY++L+D L
Sbjct: 442 EVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGL 501
Query: 361 FKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNV 420
K+ +L+ + V + + P I Y MI+G+ K K ++ + L + KG KP+V
Sbjct: 502 CKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDV 561
Query: 421 VTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEE 480
V Y MI GF + G ++ LF+EM G PN Y LI G + + L++E
Sbjct: 562 VAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKE 598
HSP 3 Score: 235.3 bits (599), Expect = 1.0e-61
Identity = 163/587 (27.77%), Postives = 274/587 (46.68%), Query Frame = 1
Query: 1 MIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGE 60
M+ +PS F+ L+ A K + F L ++M+ + Y+ILI C +
Sbjct: 72 MVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQ 131
Query: 61 LPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPD 120
LP LA +M+ G N V + S C + +A ++ +M G+ P+
Sbjct: 132 LP------LALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPN 191
Query: 121 TSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLD 180
T T++ +I L ++ A L M G PD+ TY ++++ K G A N L+
Sbjct: 192 TVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLN 251
Query: 181 EMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSG 240
+M + EP V+ Y T+I K K + A LF+ M KG PNV+TY++LI C G
Sbjct: 252 KMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYG 311
Query: 241 NIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLL 300
A ++ + M I+ + P+V T+ AL+D K K+ +A L
Sbjct: 312 RWSDASRLLSDM--------------IERKI--NPDVFTFSALIDAFVKEGKLVEAEKLY 371
Query: 301 ETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKD 360
+ M +P+ + Y +LI+GFC +LDEA+++F MV P+V TY++LI K
Sbjct: 372 DEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKY 431
Query: 361 KRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTY 420
KR++ ++V +M + N V Y +I GL + D A ++ M G PN++TY
Sbjct: 432 KRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTY 491
Query: 421 TAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQ 480
++DG K GK++K + +F + P TY ++I C G +++ + L +
Sbjct: 492 NTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSL 551
Query: 481 TYWPKHVSSYCKVIEGYKREFIL--SLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEV 540
V +Y +I G+ R+ + L +E++++G+ P Y LI ++ G E
Sbjct: 552 KGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREA 611
Query: 541 ALELHKEVISASMS-MAAKKNLYTSLIYSFSYASKIGHAFELFYDMI 585
+ EL KE+ S + A+ L T++++ G + F DM+
Sbjct: 612 SAELIKEMRSCGFAGDASTIGLVTNMLHD-------GRLDKSFLDML 629
HSP 4 Score: 58.5 bits (140), Expect = 1.7e-08
Identity = 49/229 (21.40%), Postives = 100/229 (43.67%), Query Frame = 1
Query: 390 DGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCA 449
+GLS++ K D+A L M + P+++ ++ ++ K K D + L +M + G
Sbjct: 55 NGLSEL-KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIP 114
Query: 450 PNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGY--KREFILSLGL 509
N TY++LIN C L A A+L +M + + ++ + ++ GY + ++ L
Sbjct: 115 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 174
Query: 510 LEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNL--YTSLIY 569
++++ G P + + LI + A+ L I ++ + +L Y ++
Sbjct: 175 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMAL----IDRMVAKGCQPDLVTYGVVVN 234
Query: 570 SFSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQL 615
AF L M + + P + + ++ GL + + ++AL L
Sbjct: 235 GLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNL 278
BLAST of Csa6G041170 vs. NCBI nr
Match:
gi|449446442|ref|XP_004140980.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g06710, mitochondrial [Cucumis sativus])
HSP 1 Score: 1286.9 bits (3329), Expect = 0.0e+00
Identity = 632/632 (100.00%), Postives = 632/632 (100.00%), Query Frame = 1
Query: 1 MIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGE 60
MIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGE
Sbjct: 369 MIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGE 428
Query: 61 LPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPD 120
LPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPD
Sbjct: 429 LPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPD 488
Query: 121 TSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLD 180
TSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLD
Sbjct: 489 TSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLD 548
Query: 181 EMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSG 240
EMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSG
Sbjct: 549 EMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSG 608
Query: 241 NIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLL 300
NIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLL
Sbjct: 609 NIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLL 668
Query: 301 ETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKD 360
ETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKD
Sbjct: 669 ETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKD 728
Query: 361 KRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTY 420
KRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTY
Sbjct: 729 KRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTY 788
Query: 421 TAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQ 480
TAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQ
Sbjct: 789 TAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQ 848
Query: 481 TYWPKHVSSYCKVIEGYKREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVAL 540
TYWPKHVSSYCKVIEGYKREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVAL
Sbjct: 849 TYWPKHVSSYCKVIEGYKREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVAL 908
Query: 541 ELHKEVISASMSMAAKKNLYTSLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLM 600
ELHKEVISASMSMAAKKNLYTSLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLM
Sbjct: 909 ELHKEVISASMSMAAKKNLYTSLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLM 968
Query: 601 GLIRVRRWEEALQLSDSLCQMDINWLRREDKP 633
GLIRVRRWEEALQLSDSLCQMDINWLRREDKP
Sbjct: 969 GLIRVRRWEEALQLSDSLCQMDINWLRREDKP 1000
BLAST of Csa6G041170 vs. NCBI nr
Match:
gi|449446442|ref|XP_004140980.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g06710, mitochondrial [Cucumis sativus])
HSP 1 Score: 237.3 bits (604), Expect = 7.5e-59
Identity = 172/628 (27.39%), Postives = 292/628 (46.50%), Query Frame = 1
Query: 12 IFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAE 71
+ N L+ C++ ++ A + L +++ KP + YN L+ +L + A+
Sbjct: 208 LLNVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKL------DTAQ 267
Query: 72 KAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFL 131
+ EM G +++ + FA+ LC GK+ +A +I + FVP+T Y+++I L
Sbjct: 268 LVHREMSELGLSMDEFTLGFFAQALCKVGKWREALSLIEK---EDFVPNTILYNKMISGL 327
Query: 132 CNASRVENAFFLFKEMKGTGVVPDVYTYTILI-DCFSKAGIIKQAHNWLDEMVRDGCEPT 191
C AS E A M+ T +P+V TY IL+ C +K + + L M+ +GC P+
Sbjct: 328 CEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQL-GRCKRILSMMIAEGCYPS 387
Query: 192 VVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNI------EK 251
+ +L+HAY K+ S A +L + M C P + Y LI C G + E
Sbjct: 388 YTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFEL 447
Query: 252 ACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMF 311
A + Y M V K NVV++ LC K + A ++ M
Sbjct: 448 AEKAYNEMLS-------------AGTVLNKVNVVSFARC---LCGFGKFEKAYKVIHEMM 507
Query: 312 VDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLD 371
+G P+T Y +I C A++++ A +F +M G P+VYTY+ LID K +
Sbjct: 508 GNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIK 567
Query: 372 LVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMI 431
L +M+ + C P +V YT +I K K A +L +M KGC PNV+TYTA+I
Sbjct: 568 QAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALI 627
Query: 432 DGFGKAGKVDKCLELFREM----------------GSKGCAPNFVTYTVLINHCCATGHL 491
DG+ K+G ++K +++ M + PN VTY L++ C +
Sbjct: 628 DGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKV 687
Query: 492 DEAYALLEEMKQTYWPKHVSSYCKVIEGYKREFIL--SLGLLEEVEKNGSAPIILLYKVL 551
+A LLE M + Y +I+G+ + L + + ++ ++G P + Y L
Sbjct: 688 KDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSL 747
Query: 552 IDNFVKAGRLEVALELHKEVISASMSMAAKKNLYTSLIYSFSYASKIGHAFELFYDMIRD 611
ID K RL++ L++ +++ S A +YT +I S +K A++L M
Sbjct: 748 IDRLFKDKRLDLVLKVLSKML--ENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEK 807
Query: 612 GVIPDLGTFVHLLMGLIRVRRWEEALQL 615
G P++ T+ ++ G + + ++ L+L
Sbjct: 808 GCKPNVVTYTAMIDGFGKAGKVDKCLEL 807
HSP 2 Score: 152.5 bits (384), Expect = 2.4e-33
Identity = 137/529 (25.90%), Postives = 223/529 (42.16%), Query Frame = 1
Query: 95 CLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVP 154
C GFG EK + V+ + PD E++ FL + F G P
Sbjct: 117 CDDGFG--EKTHIVLRQFRQK-LNPDLVV--EILSFLKSPELCVKFFLWAGRQIGYDHTP 176
Query: 155 DVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELF 214
VY L+D F + + +L E+ D E LI + +VA E
Sbjct: 177 AVYI--ALLDVFERGSYDRVPEEFLREIRGDDKEVLGKLLNVLIRKCCRNGLWNVALEEL 236
Query: 215 ELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEK 274
+ G P +TY AL+ + ++ ++ A ++ M + +
Sbjct: 237 GRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREM----------------SELGLS 296
Query: 275 PNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEV 334
+ T G LCK K ++A L+E + PNTI+Y+ +I G C+A+ +EA +
Sbjct: 297 MDEFTLGFFAQALCKVGKWREALSLIEK---EDFVPNTILYNKMISGLCEASFFEEAMDF 356
Query: 335 FHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSK 394
++M PNV TY L+ K+L ++LS M+ C P+ I+ ++ K
Sbjct: 357 LNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCK 416
Query: 395 VAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKV------DKCLELFREMGSKGC 454
AYKL+ ME+ CKP V Y +I G++ + + + EM S G
Sbjct: 417 SDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGT 476
Query: 455 APNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGY---KREFILSL 514
N V C G ++AY ++ EM + S+Y +VI G+ +
Sbjct: 477 VLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVI-GFLCNASRVENAF 536
Query: 515 GLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNLYTSLIY 574
L +E++ G P + Y +LID F KAG ++ A E++ YT+LI+
Sbjct: 537 FLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVV--TYTTLIH 596
Query: 575 SFSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQL 615
++ A K+ A ELF MI G P++ T+ L+ G + E+A Q+
Sbjct: 597 AYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQI 616
HSP 3 Score: 1286.9 bits (3329), Expect = 0.0e+00
Identity = 632/632 (100.00%), Postives = 632/632 (100.00%), Query Frame = 1
Query: 1 MIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGE 60
MIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGE
Sbjct: 1 MIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGE 60
Query: 61 LPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPD 120
LPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPD
Sbjct: 61 LPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPD 120
Query: 121 TSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLD 180
TSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLD
Sbjct: 121 TSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLD 180
Query: 181 EMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSG 240
EMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSG
Sbjct: 181 EMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSG 240
Query: 241 NIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLL 300
NIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLL
Sbjct: 241 NIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLL 300
Query: 301 ETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKD 360
ETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKD
Sbjct: 301 ETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKD 360
Query: 361 KRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTY 420
KRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTY
Sbjct: 361 KRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTY 420
Query: 421 TAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQ 480
TAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQ
Sbjct: 421 TAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQ 480
Query: 481 TYWPKHVSSYCKVIEGYKREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVAL 540
TYWPKHVSSYCKVIEGYKREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVAL
Sbjct: 481 TYWPKHVSSYCKVIEGYKREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVAL 540
Query: 541 ELHKEVISASMSMAAKKNLYTSLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLM 600
ELHKEVISASMSMAAKKNLYTSLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLM
Sbjct: 541 ELHKEVISASMSMAAKKNLYTSLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLM 600
Query: 601 GLIRVRRWEEALQLSDSLCQMDINWLRREDKP 633
GLIRVRRWEEALQLSDSLCQMDINWLRREDKP
Sbjct: 601 GLIRVRRWEEALQLSDSLCQMDINWLRREDKP 632
BLAST of Csa6G041170 vs. NCBI nr
Match:
gi|659089797|ref|XP_008445686.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g06710, mitochondrial [Cucumis melo])
HSP 1 Score: 1268.8 bits (3282), Expect = 0.0e+00
Identity = 619/632 (97.94%), Postives = 628/632 (99.37%), Query Frame = 1
Query: 1 MIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGE 60
MIAEGCYPSYTIFNSLVHAYCKSDDF YAYKLLKKME CECKPGYVVYNILIGSICSGGE
Sbjct: 369 MIAEGCYPSYTIFNSLVHAYCKSDDFLYAYKLLKKMETCECKPGYVVYNILIGSICSGGE 428
Query: 61 LPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPD 120
LPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPD
Sbjct: 429 LPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPD 488
Query: 121 TSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLD 180
TSTYSEVIGFLCNASRVENAFFLFKEMKGTGV+PDVYTYTILIDCFSKAG+IKQAHNWLD
Sbjct: 489 TSTYSEVIGFLCNASRVENAFFLFKEMKGTGVIPDVYTYTILIDCFSKAGLIKQAHNWLD 548
Query: 181 EMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSG 240
EMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSG
Sbjct: 549 EMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSG 608
Query: 241 NIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLL 300
NIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLL
Sbjct: 609 NIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLL 668
Query: 301 ETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKD 360
ETMFVDGCEPNTI+YDALIDGFCKAAKLDEAQEVFHKMVE GYNPNVYTYSSLIDRLFKD
Sbjct: 669 ETMFVDGCEPNTIIYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKD 728
Query: 361 KRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTY 420
KRLDLVLKVLSKMLENSCAPN+VIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTY
Sbjct: 729 KRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTY 788
Query: 421 TAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQ 480
TAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQ
Sbjct: 789 TAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQ 848
Query: 481 TYWPKHVSSYCKVIEGYKREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVAL 540
TYWPKHVSSYCKVIEGY+REFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVAL
Sbjct: 849 TYWPKHVSSYCKVIEGYRREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVAL 908
Query: 541 ELHKEVISASMSMAAKKNLYTSLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLM 600
ELHKEVISASMSMAAKKN+YTSLIYSFS+ASKIGHAFELFYDMIRDGVIPDLGTFVHLLM
Sbjct: 909 ELHKEVISASMSMAAKKNMYTSLIYSFSHASKIGHAFELFYDMIRDGVIPDLGTFVHLLM 968
Query: 601 GLIRVRRWEEALQLSDSLCQMDINWLRREDKP 633
GLIRVR WEEALQLSDS+CQMDINWLR+EDKP
Sbjct: 969 GLIRVRMWEEALQLSDSICQMDINWLRQEDKP 1000
BLAST of Csa6G041170 vs. NCBI nr
Match:
gi|659089797|ref|XP_008445686.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g06710, mitochondrial [Cucumis melo])
HSP 1 Score: 234.2 bits (596), Expect = 6.3e-58
Identity = 170/628 (27.07%), Postives = 290/628 (46.18%), Query Frame = 1
Query: 12 IFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAE 71
+ N L+ C++ ++ A + L +++ KP + YN L+ +L + A+
Sbjct: 208 LLNVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKL------DTAQ 267
Query: 72 KAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFL 131
+ EM G +++ + FA+ LC GK+ +A +I + FVP+T Y+++I L
Sbjct: 268 LVHREMSELGLSMDEFTLGFFAQALCKVGKWREALSLIEK---EDFVPNTILYNKMISGL 327
Query: 132 CNASRVENAFFLFKEMKGTGVVPDVYTYTILI-DCFSKAGIIKQAHNWLDEMVRDGCEPT 191
C AS E A M+ + +P+V TY IL+ C +K + + L M+ +GC P+
Sbjct: 328 CEASFFEEAMDFLNRMRSSSCIPNVQTYKILLCGCLNKKQ-LGRCKRILSMMIAEGCYPS 387
Query: 192 VVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNI------EK 251
+ +L+HAY K+ A +L + M C P + Y LI C G + E
Sbjct: 388 YTIFNSLVHAYCKSDDFLYAYKLLKKMETCECKPGYVVYNILIGSICSGGELPGPVTFEL 447
Query: 252 ACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMF 311
A + Y M V K NVV++ LC K + A ++ M
Sbjct: 448 AEKAYNEMLS-------------AGTVLNKVNVVSFARC---LCGFGKFEKAYKVIHEMM 507
Query: 312 VDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLD 371
+G P+T Y +I C A++++ A +F +M G P+VYTY+ LID K +
Sbjct: 508 GNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVIPDVYTYTILIDCFSKAGLIK 567
Query: 372 LVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMI 431
L +M+ + C P +V YT +I K K A +L +M KGC PNV+TYTA+I
Sbjct: 568 QAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALI 627
Query: 432 DGFGKAGKVDKCLELFREM----------------GSKGCAPNFVTYTVLINHCCATGHL 491
DG+ K+G ++K +++ M + PN VTY L++ C +
Sbjct: 628 DGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKV 687
Query: 492 DEAYALLEEMKQTYWPKHVSSYCKVIEGYKREFIL--SLGLLEEVEKNGSAPIILLYKVL 551
+A LLE M + Y +I+G+ + L + + ++ + G P + Y L
Sbjct: 688 KDARDLLETMFVDGCEPNTIIYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSL 747
Query: 552 IDNFVKAGRLEVALELHKEVISASMSMAAKKNLYTSLIYSFSYASKIGHAFELFYDMIRD 611
ID K RL++ L++ +++ S A +YT +I S +K A++L M
Sbjct: 748 IDRLFKDKRLDLVLKVLSKML--ENSCAPNVVIYTEMIDGLSKVAKTDEAYKLMLMMEEK 807
Query: 612 GVIPDLGTFVHLLMGLIRVRRWEEALQL 615
G P++ T+ ++ G + + ++ L+L
Sbjct: 808 GCKPNVVTYTAMIDGFGKAGKVDKCLEL 807
HSP 2 Score: 149.4 bits (376), Expect = 2.1e-32
Identity = 137/529 (25.90%), Postives = 221/529 (41.78%), Query Frame = 1
Query: 95 CLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVP 154
C GFG EK + V+ + PD E++ FL + F G P
Sbjct: 117 CDDGFG--EKTHIVLRQFRQK-LNPDLVV--EILSFLRSPELCVKFFLWAGRQIGYSHTP 176
Query: 155 DVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELF 214
VY L+D F + +L E+ D E LI + +VA E
Sbjct: 177 AVYI--ALLDVFECRSYDRVPEEFLREIKGDDQEVLGKLLNVLIRKCCRNGLWNVALEEL 236
Query: 215 ELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEK 274
+ G P +TY AL+ + ++ ++ A ++ M + +
Sbjct: 237 GRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREM----------------SELGLS 296
Query: 275 PNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEV 334
+ T G LCK K ++A L+E + PNTI+Y+ +I G C+A+ +EA +
Sbjct: 297 MDEFTLGFFAQALCKVGKWREALSLIEK---EDFVPNTILYNKMISGLCEASFFEEAMDF 356
Query: 335 FHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSK 394
++M PNV TY L+ K+L ++LS M+ C P+ I+ ++ K
Sbjct: 357 LNRMRSSSCIPNVQTYKILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCK 416
Query: 395 VAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKV------DKCLELFREMGSKGC 454
AYKL+ ME CKP V Y +I G++ + + + EM S G
Sbjct: 417 SDDFLYAYKLLKKMETCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGT 476
Query: 455 APNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGY---KREFILSL 514
N V C G ++AY ++ EM + S+Y +VI G+ +
Sbjct: 477 VLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVI-GFLCNASRVENAF 536
Query: 515 GLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNLYTSLIY 574
L +E++ G P + Y +LID F KAG ++ A E++ YT+LI+
Sbjct: 537 FLFKEMKGTGVIPDVYTYTILIDCFSKAGLIKQAHNWLDEMVRDGCEPTVV--TYTTLIH 596
Query: 575 SFSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQL 615
++ A K+ A ELF MI G P++ T+ L+ G + E+A Q+
Sbjct: 597 AYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQI 616
HSP 3 Score: 961.8 bits (2485), Expect = 5.8e-277
Identity = 463/630 (73.49%), Postives = 529/630 (83.97%), Query Frame = 1
Query: 1 MIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGE 60
MI EGCYPS IFNSL+HAYC+S D+SYAYKLLKKM C C+PGYVVYNILIG IC +
Sbjct: 360 MITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEK 419
Query: 61 LPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPD 120
LP ELAEKAY EML A VLNKVNV + ARCLCG GKFEKAY +I EMM GF+PD
Sbjct: 420 LPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPD 479
Query: 121 TSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLD 180
TSTYS+VIG LCNAS+V+NAF LF+EMK VVPDV+TYTILID F K G+++QA W D
Sbjct: 480 TSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFD 539
Query: 181 EMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSG 240
EMVRDGC P VVTYT LIHAYLKA+K+S ANELFE+M+++GC PNV+TYTALIDG+CKSG
Sbjct: 540 EMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSG 599
Query: 241 NIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLL 300
IEKACQIYARMRG+ADIPDVDMYFKI + PN+ TYGALVDGLCKAHKVK+ARDLL
Sbjct: 600 QIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLL 659
Query: 301 ETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKD 360
+ M V+GCEPN IVYDALIDGFCK KLDEAQ VF KM E GY PNVYTYSSLIDRLFKD
Sbjct: 660 DVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKD 719
Query: 361 KRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTY 420
KRLDL LKVLS+MLENSCAPN++IYTEMIDGL KV KTDEAY+LM MMEEKGC PNVVTY
Sbjct: 720 KRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTY 779
Query: 421 TAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQ 480
TAMIDGFGKAGKVDKCLEL R+MG+KGCAPNFVTY VLINHCCA G LD+A+ LL+EMKQ
Sbjct: 780 TAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQ 839
Query: 481 TYWPKHVSSYCKVIEGYKREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVAL 540
TYWPKH++ Y KVIEG+ REFI+SLGLL+E+ +N + PII Y++LID+F KAGRLE+AL
Sbjct: 840 TYWPKHMAGYRKVIEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELAL 899
Query: 541 ELHKEVISASMSMAAKKNLYTSLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLM 600
ELHKE+ S + AA K+LY+SLI S S ASK+ AFEL+ DMI+ G IP+L F +L+
Sbjct: 900 ELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVK 959
Query: 601 GLIRVRRWEEALQLSDSLCQMDINWLRRED 631
GLIR+ RWEEALQLSD +CQMDI+WL+ E+
Sbjct: 960 GLIRINRWEEALQLSDCICQMDIHWLQVEE 989
BLAST of Csa6G041170 vs. NCBI nr
Match:
gi|731390756|ref|XP_010650483.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g06710, mitochondrial isoform X1 [Vitis vinifera])
HSP 1 Score: 239.2 bits (609), Expect = 2.0e-59
Identity = 169/580 (29.14%), Postives = 273/580 (47.07%), Query Frame = 1
Query: 12 IFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAE 71
I+ ++ C++ F A L +M C P V Y IL+ +L +
Sbjct: 301 IYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQL------GRCK 360
Query: 72 KAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFL 131
+ + M++ G ++ S C G + AYK++ +M G P Y+ +IG +
Sbjct: 361 RILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGI 420
Query: 132 CNASR------VENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRD 191
C + +E A + EM VV + + L C AG ++A++ + EM+
Sbjct: 421 CGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSK 480
Query: 192 GCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKA 251
G P TY+ +I A KV A LFE M + P+V TYT LID +CK G +++A
Sbjct: 481 GFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQA 540
Query: 252 CQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFV 311
+ + M +++ A PNVVTY AL+ KA K+ A +L E M
Sbjct: 541 RKWFDEM--------------VRDGCA--PNVVTYTALIHAYLKARKMSSANELFEMMLS 600
Query: 312 DGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDL 371
+GC PN + Y ALIDG CK+ ++++A +++ +M + P+V Y + D +D
Sbjct: 601 EGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRD----- 660
Query: 372 VLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMID 431
PNI Y ++DGL K K EA L+ +M +GC+PN + Y A+ID
Sbjct: 661 --------------PNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALID 720
Query: 432 GFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPK 491
GF K GK+D+ +F +M +G PN TY+ LI+ LD A +L M +
Sbjct: 721 GFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAP 780
Query: 492 HVSSYCKVIEGYKR--EFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALELH 551
+V Y ++I+G + + + L+ +E+ G P ++ Y +ID F KAG+++ LEL
Sbjct: 781 NVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELM 837
Query: 552 KEVISASMSMAAKKNLYTSLIYSFSYASKIGHAFELFYDM 584
+++ + A Y LI A + A +L +M
Sbjct: 841 RQM--GAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEM 837
HSP 2 Score: 212.6 bits (540), Expect = 2.0e-51
Identity = 165/603 (27.36%), Postives = 267/603 (44.28%), Query Frame = 1
Query: 12 IFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAE 71
+ N L+ C++ ++ A + L +++ KP + YN L+ L + A
Sbjct: 199 LLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRL------DTAY 258
Query: 72 KAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFL 131
+ EM +G ++ + F LC G++ +A +I + F DT Y+++I L
Sbjct: 259 LVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEK---EEFKLDTVIYTQMISGL 318
Query: 132 CNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTV 191
C AS E A M+ + +P+V TY IL+ + + + L M+ +GC P+
Sbjct: 319 CEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSR 378
Query: 192 VTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYAR 251
+ +LIHAY ++ S A +L + M GC P + Y LI G C
Sbjct: 379 RIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGIC-------------- 438
Query: 252 MRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPN 311
G+ +P +D+ +AEK YG ++D AH V N
Sbjct: 439 --GNEKLPSLDVL-----ELAEK----AYGEMLD----AHVVL----------------N 498
Query: 312 TIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLS 371
+ L C A K ++A + +M+ G+ P+ TYS +I L ++D +
Sbjct: 499 KVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFE 558
Query: 372 KMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAG 431
+M N P++ YT +ID KV +A K M GC PNVVTYTA+I + KA
Sbjct: 559 EMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKAR 618
Query: 432 KVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYC 491
K+ ELF M S+GC PN VTYT LI+ C +G +++A + M+ V Y
Sbjct: 619 KMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYF 678
Query: 492 KVIEGYKREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALELHKEVISASM 551
K+ +G R+ P I Y L+D KA +++ A +L +V+S
Sbjct: 679 KIDDGNIRD-----------------PNIFTYGALVDGLCKAHKVKEARDL-LDVMSVE- 728
Query: 552 SMAAKKNLYTSLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEA 611
+Y +LI F K+ A +F M G P++ T+ L+ L + +R + A
Sbjct: 739 GCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLA 728
Query: 612 LQL 615
L++
Sbjct: 799 LKV 728
HSP 3 Score: 961.8 bits (2485), Expect = 5.8e-277
Identity = 463/630 (73.49%), Postives = 529/630 (83.97%), Query Frame = 1
Query: 1 MIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGE 60
MI EGCYPS IFNSL+HAYC+S D+SYAYKLLKKM C C+PGYVVYNILIG IC +
Sbjct: 360 MITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEK 419
Query: 61 LPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPD 120
LP ELAEKAY EML A VLNKVNV + ARCLCG GKFEKAY +I EMM GF+PD
Sbjct: 420 LPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPD 479
Query: 121 TSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLD 180
TSTYS+VIG LCNAS+V+NAF LF+EMK VVPDV+TYTILID F K G+++QA W D
Sbjct: 480 TSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFD 539
Query: 181 EMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSG 240
EMVRDGC P VVTYT LIHAYLKA+K+S ANELFE+M+++GC PNV+TYTALIDG+CKSG
Sbjct: 540 EMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSG 599
Query: 241 NIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLL 300
IEKACQIYARMRG+ADIPDVDMYFKI + PN+ TYGALVDGLCKAHKVK+ARDLL
Sbjct: 600 QIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLL 659
Query: 301 ETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKD 360
+ M V+GCEPN IVYDALIDGFCK KLDEAQ VF KM E GY PNVYTYSSLIDRLFKD
Sbjct: 660 DVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKD 719
Query: 361 KRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTY 420
KRLDL LKVLS+MLENSCAPN++IYTEMIDGL KV KTDEAY+LM MMEEKGC PNVVTY
Sbjct: 720 KRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTY 779
Query: 421 TAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQ 480
TAMIDGFGKAGKVDKCLEL R+MG+KGCAPNFVTY VLINHCCA G LD+A+ LL+EMKQ
Sbjct: 780 TAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQ 839
Query: 481 TYWPKHVSSYCKVIEGYKREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVAL 540
TYWPKH++ Y KVIEG+ REFI+SLGLL+E+ +N + PII Y++LID+F KAGRLE+AL
Sbjct: 840 TYWPKHMAGYRKVIEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELAL 899
Query: 541 ELHKEVISASMSMAAKKNLYTSLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLM 600
ELHKE+ S + AA K+LY+SLI S S ASK+ AFEL+ DMI+ G IP+L F +L+
Sbjct: 900 ELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVK 959
Query: 601 GLIRVRRWEEALQLSDSLCQMDINWLRRED 631
GLIR+ RWEEALQLSD +CQMDI+WL+ E+
Sbjct: 960 GLIRINRWEEALQLSDCICQMDIHWLQVEE 989
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| PPR18_ARATH | 9.3e-235 | 64.09 | Pentatricopeptide repeat-containing protein At1g06710, mitochondrial OS=Arabidop... | [more] |
| PP217_ARATH | 2.8e-66 | 28.13 | Pentatricopeptide repeat-containing protein At3g06920 OS=Arabidopsis thaliana GN... | [more] |
| PP445_ARATH | 3.7e-66 | 31.76 | Pentatricopeptide repeat-containing protein At5g65560 OS=Arabidopsis thaliana GN... | [more] |
| RF1_ORYSI | 4.8e-66 | 27.87 | Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1 PE=2 SV=1 | [more] |
| PPR28_ARATH | 6.3e-66 | 30.41 | Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana GN... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0KDY8_CUCSA | 0.0e+00 | 100.00 | Uncharacterized protein OS=Cucumis sativus GN=Csa_6G041170 PE=4 SV=1 | [more] |
| A0A061EJB3_THECC | 7.6e-276 | 72.94 | Tetratricopeptide repeat (TPR)-like superfamily protein isoform 1 OS=Theobroma c... | [more] |
| A0A061EJB3_THECC | 7.0e-64 | 28.28 | Tetratricopeptide repeat (TPR)-like superfamily protein isoform 1 OS=Theobroma c... | [more] |
| A0A0D2RE91_GOSRA | 2.5e-61 | 27.63 | Uncharacterized protein OS=Gossypium raimondii GN=B456_005G019500 PE=4 SV=1 | [more] |
| F6I3S9_VITVI | 1.4e-59 | 29.14 | Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0124g00470 PE=4 SV=... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT1G06710.1 | 2.5e-238 | 63.59 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT3G06920.1 | 1.6e-67 | 28.13 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT5G65560.1 | 2.1e-67 | 31.76 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT1G09900.1 | 3.6e-67 | 30.41 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
| AT1G62670.1 | 7.9e-67 | 29.73 | rna processing factor 2 | [more] |
