Csa6G037510 (gene) Cucumber (Chinese Long) v2

NameCsa6G037510
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr6 : 2654421 .. 2654756 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTTTTCTTCTTCATTTATCAAAATCCCACACTACCTCTTCACTAAACAGCTGTCACTGCCACCACCAGTGTCCATCGTACCCAGCCCTCACCCTCGCCTTGGTCTCTTTCACGGTCTGCTCGTCACCACTAAGTCGAAACCCTCGTCTCTTTCATGTTCGACTCTTCACCAACATCAAAACCCTCAACTCTTTCACATTGTGTTCGCCACCATCGTCGAAAACCTTCATTCATGTTGGTGACCAGCTTTCACCACCACTGTACACAGCTCGTTCGTACCTATCTCTCACCACCATCGTTGGAAATATTTTCCTCTTCGGTGAAGTGTGTTAG

mRNA sequence

ATGATTTTTCTTCTTCATTTATCAAAATCCCACACTACCTCTTCACTAAACAGCTGTCACTGCCACCACCAGTGTCCATCGTACCCAGCCCTCACCCTCGCCTTGGTCTCTTTCACGGTCTGCTCGTCACCACTAAGTCGAAACCCTCGTCTCTTTCATGTTCGACTCTTCACCAACATCAAAACCCTCAACTCTTTCACATTGTGTTCGCCACCATCGTCGAAAACCTTCATTCATGTTGGTGACCAGCTTTCACCACCACTGTACACAGCTCGTTCGTACCTATCTCTCACCACCATCGTTGGAAATATTTTCCTCTTCGGTGAAGTGTGTTAG

Coding sequence (CDS)

ATGATTTTTCTTCTTCATTTATCAAAATCCCACACTACCTCTTCACTAAACAGCTGTCACTGCCACCACCAGTGTCCATCGTACCCAGCCCTCACCCTCGCCTTGGTCTCTTTCACGGTCTGCTCGTCACCACTAAGTCGAAACCCTCGTCTCTTTCATGTTCGACTCTTCACCAACATCAAAACCCTCAACTCTTTCACATTGTGTTCGCCACCATCGTCGAAAACCTTCATTCATGTTGGTGACCAGCTTTCACCACCACTGTACACAGCTCGTTCGTACCTATCTCTCACCACCATCGTTGGAAATATTTTCCTCTTCGGTGAAGTGTGTTAG

Protein sequence

MIFLLHLSKSHTTSSLNSCHCHHQCPSYPALTLALVSFTVCSSPLSRNPRLFHVRLFTNIKTLNSFTLCSPPSSKTFIHVGDQLSPPLYTARSYLSLTTIVGNIFLFGEVC*
BLAST of Csa6G037510 vs. TrEMBL
Match: A0A0A0KAU6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G037510 PE=4 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 3.0e-58
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 1

Query: 1   MIFLLHLSKSHTTSSLNSCHCHHQCPSYPALTLALVSFTVCSSPLSRNPRLFHVRLFTNI 60
           MIFLLHLSKSHTTSSLNSCHCHHQCPSYPALTLALVSFTVCSSPLSRNPRLFHVRLFTNI
Sbjct: 1   MIFLLHLSKSHTTSSLNSCHCHHQCPSYPALTLALVSFTVCSSPLSRNPRLFHVRLFTNI 60

Query: 61  KTLNSFTLCSPPSSKTFIHVGDQLSPPLYTARSYLSLTTIVGNIFLFGEVC 112
           KTLNSFTLCSPPSSKTFIHVGDQLSPPLYTARSYLSLTTIVGNIFLFGEVC
Sbjct: 61  KTLNSFTLCSPPSSKTFIHVGDQLSPPLYTARSYLSLTTIVGNIFLFGEVC 111

BLAST of Csa6G037510 vs. NCBI nr
Match: gi|700190750|gb|KGN45954.1| (hypothetical protein Csa_6G037510 [Cucumis sativus])

HSP 1 Score: 232.3 bits (591), Expect = 4.3e-58
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 1

Query: 1   MIFLLHLSKSHTTSSLNSCHCHHQCPSYPALTLALVSFTVCSSPLSRNPRLFHVRLFTNI 60
           MIFLLHLSKSHTTSSLNSCHCHHQCPSYPALTLALVSFTVCSSPLSRNPRLFHVRLFTNI
Sbjct: 1   MIFLLHLSKSHTTSSLNSCHCHHQCPSYPALTLALVSFTVCSSPLSRNPRLFHVRLFTNI 60

Query: 61  KTLNSFTLCSPPSSKTFIHVGDQLSPPLYTARSYLSLTTIVGNIFLFGEVC 112
           KTLNSFTLCSPPSSKTFIHVGDQLSPPLYTARSYLSLTTIVGNIFLFGEVC
Sbjct: 61  KTLNSFTLCSPPSSKTFIHVGDQLSPPLYTARSYLSLTTIVGNIFLFGEVC 111

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KAU6_CUCSA3.0e-58100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G037510 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700190750|gb|KGN45954.1|4.3e-58100.00hypothetical protein Csa_6G037510 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa6G037510.1Csa6G037510.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None