Csa6G031960 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa6G031960
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	WGS project CAID00000000 data, contig chromosome 05
Location	Chr6 : 2585426 .. 2588145 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACAATATACATAATATACATAGAGAGAAGGCCTCCTCCCTACATAAACAAAGCCTCGGGATTCCAAATCCAAATTTGCAGCCATAACTTTGCCACGCACAGTTATTTGGAGAGAAAAATGGCGAAGGCCATGATAGCATCTCAACCTTTGCTCTCCAACCACTCCTTTCCGGTGATTAAACCCTACACTCTAACTTCCCCCCTCTCTCCTTTCCGTTTCTTCAGACCACAACAACCACTGCTCTCTCCTTTAATCTCCACCACCACTCCCTTCTCACTCTCACCCAATCGCCGGAATTGTTCTCTTACCCGCCCTGCCGCTCGCAGGAAACCCACATTCGTTGATTCTACAGACTTTTCCAACGACGGTGATTCCAATGTCCGACGGTTGCTTCAAGTTCTGCTCTGGGGTGCTGAGGCTGTTTACATTTTGTGGCTATTTCTCCTTCCTTATGCTCCGGTCTCTTTTAATCGCTATTTCATGTTTAATTAAGCTTAATTCTGTGTTGGGAATTTATGTTTTACTTTTTTAAGATCTTGTTAACAAACAAAGCAATACACTCAGATTGATCTCGTAGATTACAGTTTCTGTTGATCTGAAAGTTCATTTATATTGGTTCTTAATAATTACAGGGAGATCCTGTGTGGGCAATCAGTTCAGAAACTGTGAATTCTCTTCTGGGTCTTTCTCTGAATTTCTTCTTTGTATTGCCTGCTATGAACTCTGGTACGCTTTATTTGTTGTTTCCTTCACTCTATAACTACGTATTAGGTACCTGCCAATCAATTTATAAAGCATGTCTCATGTTTTGTAGAATTAACTGTCTAATTATTTGGAATTGTCTTTCCCCAGACAATCTTTTTCTTTTCTGAAAACTAGAATGAAGAAAACGACTCCCCCCTCCACTATTGAATGGGGTTGTGGTGAGGAGATGAGGTACAGTGTGCGGTTGCTATCAAGAATTGTTTATGGTATTGAGTTGAGTTATGAAGAGTCCATTGGATTGACTTTCTAAGTATTTATAAACATCTTTTTGCATTTATAAGCACTTGCTTAAACACTTAGAAAACCAATCCAAACTCTCTCGGTCTCTGGAGTTTATATATGTTGGAGTTTGGTAGGATCTAGAGTTAATGTACAAAAGAGAGAGGGAGGAAGATCGAATTCTTCAATAAACGTGCGAACTTCAATAATGAAAACTATTGAAATTTGTGGAGTTGATTTATTTAACCCTTGCTTATTGAAGTCGGTGGGCCAAACAACCCCGACTTGCTATGAGTTCAGTTGGTATATCTTTAAAGATACGAGATCCAAACCCCCCCTAATAACTCAATAACTGAAAATTCTTATTCTCTCTACCTGATTATACTCGTATGTCAGCCTGGTAAAACCAAAGAAGGCTGGCCTCAATATTGTTCCTTTTTCAGTTCAATATTTGCAGAGATGAGAGATCAACTCTCTAGCCCGAAGGGAGCAAACATATGTCAACTACTATTGATTTACATTTTACTTGAGAATGCGCCTTATAGTTTGCTCCTTCATAATTTTTGGCAATAAATTTTCTGGCAGGACAGTGGGCATTCGTTTGATTGATGCTCCTGTTCTTCACCCAGTAAGAATTATTTTCCAATCATTGACCTCACTATGTAATTTTTCTTCACTCAATGACACCATTGGCATAACAGACTTTTCTTTCTCATTAGATGTCTGAGGGATTGTTCAATTTTGTTATCGCATGGACGCTCATGTTTGCTCCCCTGCTGTTCACGGATCGAAAGAGGGACCAATACAGTGGTTCATTAGACTTATTGTGGGGCTTTCAGATGTTCCTTACGAACAGTGAGTTTTATTTCCAACTTGTTTCTTTGATTTGAGAGATTCATGATGGAGCAAAGTTTAGTGTACACATGTTTCCCCTTAATAGTCTTTCTTTACATCTTAAAGGGATATATTCTATTTGATTTGAACAATTGCAGTACCTGAGAATCATAGGATTTCTTGTAAATAATACGATCTTTGTTGCAGTTACATATGAATGTATGATCTATTTTGTTTATTTTGGTTTTAATTGTTTGCCTTAGATTTCTGTATATCAGTTTGGGATGGGATGTTAAATTACAGTTCAGACACTAAGATGTAATCAGATAACTCTTTTAACAAACAACTTTTCTTTATGTGAGGCACCAGCCTTTTTGATACCTTATATGGCTATCCGGCTTAATGAGGCTAGTGAAGACTCTGCCCCACAACCGCAGTCGAAGCTGGGCACTTTGATGACCAATGGAGCTCCTGTCGTTGGCGTGATCGGTGGTGCAATGTGCATCATATCGATAATATGGTCGTTCGTTGGTCGAGCGGATGGTAACTTTGGAGGTGTAGCAGAGAGATGGGAGTTCTTGATCCAATATCTATCTTCAGAGAGGTTAGCTTATGCTTTTATTTGGGATATTTGCCTTTACAGTGTATTCCAGCCTTGGTTGATTGGAGAAAACCTTCAAAATGTTAAGGAGAGCAAGATTGGAGTTGTAAGTTCCCTTAGATTTGTCCCTGTGGTTGGCTTAATTGCCTATCTTCTTTTTCTCAAACTTGATGAGGAATTATAATTTCTGCTTGCATGTAACAACAACTAAAAATTAGATAAATATGGGTTATTTGTTAAAAGACAATTTAGGCCAAAGTACTTCCGTTGATATCATTGTGATCAGATAGTGATTCATTA

mRNA sequence

ATGGCGAAGGCCATGATAGCATCTCAACCTTTGCTCTCCAACCACTCCTTTCCGGTGATTAAACCCTACACTCTAACTTCCCCCCTCTCTCCTTTCCGTTTCTTCAGACCACAACAACCACTGCTCTCTCCTTTAATCTCCACCACCACTCCCTTCTCACTCTCACCCAATCGCCGGAATTGTTCTCTTACCCGCCCTGCCGCTCGCAGGAAACCCACATTCGTTGATTCTACAGACTTTTCCAACGACGGTGATTCCAATGTCCGACGGTTGCTTCAAGTTCTGCTCTGGGGTGCTGAGGCTGTTTACATTTTGTGGCTATTTCTCCTTCCTTATGCTCCGGGAGATCCTGTGTGGGCAATCAGTTCAGAAACTGTGAATTCTCTTCTGGGTCTTTCTCTGAATTTCTTCTTTGTATTGCCTGCTATGAACTCTGTGGGCATTCGTTTGATTGATGCTCCTGTTCTTCACCCAATGTCTGAGGGATTGTTCAATTTTGTTATCGCATGGACGCTCATGTTTGCTCCCCTGCTGTTCACGGATCGAAAGAGGGACCAATACAGTGGTTCATTAGACTTATTGTGGGGCTTTCAGATGTTCCTTACGAACACCTTTTTGATACCTTATATGGCTATCCGGCTTAATGAGGCTAGTGAAGACTCTGCCCCACAACCGCAGTCGAAGCTGGGCACTTTGATGACCAATGGAGCTCCTGTCGTTGGCGTGATCGGTGGTGCAATGTGCATCATATCGATAATATGGTCGTTCGTTGGTCGAGCGGATGGTAACTTTGGAGGTGTAGCAGAGAGATGGGAGTTCTTGATCCAATATCTATCTTCAGAGAGGTTAGCTTATGCTTTTATTTGGGATATTTGCCTTTACAGTGTATTCCAGCCTTGGTTGATTGGAGAAAACCTTCAAAATGTTAAGGAGAGCAAGATTGGAGTTGTAAGTTCCCTTAGATTTGTCCCTGTGGTTGGCTTAATTGCCTATCTTCTTTTTCTCAAACTTGATGAGGAATTATAA

Coding sequence (CDS)

ATGGCGAAGGCCATGATAGCATCTCAACCTTTGCTCTCCAACCACTCCTTTCCGGTGATTAAACCCTACACTCTAACTTCCCCCCTCTCTCCTTTCCGTTTCTTCAGACCACAACAACCACTGCTCTCTCCTTTAATCTCCACCACCACTCCCTTCTCACTCTCACCCAATCGCCGGAATTGTTCTCTTACCCGCCCTGCCGCTCGCAGGAAACCCACATTCGTTGATTCTACAGACTTTTCCAACGACGGTGATTCCAATGTCCGACGGTTGCTTCAAGTTCTGCTCTGGGGTGCTGAGGCTGTTTACATTTTGTGGCTATTTCTCCTTCCTTATGCTCCGGGAGATCCTGTGTGGGCAATCAGTTCAGAAACTGTGAATTCTCTTCTGGGTCTTTCTCTGAATTTCTTCTTTGTATTGCCTGCTATGAACTCTGTGGGCATTCGTTTGATTGATGCTCCTGTTCTTCACCCAATGTCTGAGGGATTGTTCAATTTTGTTATCGCATGGACGCTCATGTTTGCTCCCCTGCTGTTCACGGATCGAAAGAGGGACCAATACAGTGGTTCATTAGACTTATTGTGGGGCTTTCAGATGTTCCTTACGAACACCTTTTTGATACCTTATATGGCTATCCGGCTTAATGAGGCTAGTGAAGACTCTGCCCCACAACCGCAGTCGAAGCTGGGCACTTTGATGACCAATGGAGCTCCTGTCGTTGGCGTGATCGGTGGTGCAATGTGCATCATATCGATAATATGGTCGTTCGTTGGTCGAGCGGATGGTAACTTTGGAGGTGTAGCAGAGAGATGGGAGTTCTTGATCCAATATCTATCTTCAGAGAGGTTAGCTTATGCTTTTATTTGGGATATTTGCCTTTACAGTGTATTCCAGCCTTGGTTGATTGGAGAAAACCTTCAAAATGTTAAGGAGAGCAAGATTGGAGTTGTAAGTTCCCTTAGATTTGTCCCTGTGGTTGGCTTAATTGCCTATCTTCTTTTTCTCAAACTTGATGAGGAATTATAA

Protein sequence

MAKAMIASQPLLSNHSFPVIKPYTLTSPLSPFRFFRPQQPLLSPLISTTTPFSLSPNRRNCSLTRPAARRKPTFVDSTDFSNDGDSNVRRLLQVLLWGAEAVYILWLFLLPYAPGDPVWAISSETVNSLLGLSLNFFFVLPAMNSVGIRLIDAPVLHPMSEGLFNFVIAWTLMFAPLLFTDRKRDQYSGSLDLLWGFQMFLTNTFLIPYMAIRLNEASEDSAPQPQSKLGTLMTNGAPVVGVIGGAMCIISIIWSFVGRADGNFGGVAERWEFLIQYLSSERLAYAFIWDICLYSVFQPWLIGENLQNVKESKIGVVSSLRFVPVVGLIAYLLFLKLDEEL*

Homology

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BLAST of Csa6G031960 vs. TrEMBL
Match: A0A0A0KC53_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G031960 PE=4 SV=1)

HSP 1 Score: 686.4 bits (1770), Expect = 1.8e-194
Identity = 341/341 (100.00%), Postives = 341/341 (100.00%), Query Frame = 1


Query: 1   MAKAMIASQPLLSNHSFPVIKPYTLTSPLSPFRFFRPQQPLLSPLISTTTPFSLSPNRRN 60
           MAKAMIASQPLLSNHSFPVIKPYTLTSPLSPFRFFRPQQPLLSPLISTTTPFSLSPNRRN
Sbjct: 1   MAKAMIASQPLLSNHSFPVIKPYTLTSPLSPFRFFRPQQPLLSPLISTTTPFSLSPNRRN 60

Query: 61  CSLTRPAARRKPTFVDSTDFSNDGDSNVRRLLQVLLWGAEAVYILWLFLLPYAPGDPVWA 120
           CSLTRPAARRKPTFVDSTDFSNDGDSNVRRLLQVLLWGAEAVYILWLFLLPYAPGDPVWA
Sbjct: 61  CSLTRPAARRKPTFVDSTDFSNDGDSNVRRLLQVLLWGAEAVYILWLFLLPYAPGDPVWA 120

Query: 121 ISSETVNSLLGLSLNFFFVLPAMNSVGIRLIDAPVLHPMSEGLFNFVIAWTLMFAPLLFT 180
           ISSETVNSLLGLSLNFFFVLPAMNSVGIRLIDAPVLHPMSEGLFNFVIAWTLMFAPLLFT
Sbjct: 121 ISSETVNSLLGLSLNFFFVLPAMNSVGIRLIDAPVLHPMSEGLFNFVIAWTLMFAPLLFT 180

Query: 181 DRKRDQYSGSLDLLWGFQMFLTNTFLIPYMAIRLNEASEDSAPQPQSKLGTLMTNGAPVV 240
           DRKRDQYSGSLDLLWGFQMFLTNTFLIPYMAIRLNEASEDSAPQPQSKLGTLMTNGAPVV
Sbjct: 181 DRKRDQYSGSLDLLWGFQMFLTNTFLIPYMAIRLNEASEDSAPQPQSKLGTLMTNGAPVV 240

Query: 241 GVIGGAMCIISIIWSFVGRADGNFGGVAERWEFLIQYLSSERLAYAFIWDICLYSVFQPW 300
           GVIGGAMCIISIIWSFVGRADGNFGGVAERWEFLIQYLSSERLAYAFIWDICLYSVFQPW
Sbjct: 241 GVIGGAMCIISIIWSFVGRADGNFGGVAERWEFLIQYLSSERLAYAFIWDICLYSVFQPW 300

Query: 301 LIGENLQNVKESKIGVVSSLRFVPVVGLIAYLLFLKLDEEL 342
           LIGENLQNVKESKIGVVSSLRFVPVVGLIAYLLFLKLDEEL
Sbjct: 301 LIGENLQNVKESKIGVVSSLRFVPVVGLIAYLLFLKLDEEL 341

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BLAST of Csa6G031960 vs. TrEMBL
Match: V4SSX2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10031676mg PE=4 SV=1)

HSP 1 Score: 443.7 bits (1140), Expect = 2.0e-121
Identity = 225/345 (65.22%), Postives = 260/345 (75.36%), Query Frame = 1


Query: 1   MAKAMIASQPLLSNHSFPVIKPYTLTSPLSPFRFFRPQQPLLSPLISTTTPFSLSPNRRN 60
           M+ A     P   NHS    K +    P   F         L P+            +R 
Sbjct: 77  MSVAAATPLPCFKNHSILSTKSFNSKPPRRHFDNATISSQSLPPV----------QKQRR 136

Query: 61  CSLTRP----AARRKPTFV-DSTDFSNDGDSNVRRLLQVLLWGAEAVYILWLFLLPYAPG 120
             LTR     AARRKPT   D++  S +G+ NVRR+LQ++LW AEAVYILWLFLLPYAPG
Sbjct: 137 VHLTRTVVCHAARRKPTVAADASKASAEGNDNVRRVLQIVLWAAEAVYILWLFLLPYAPG 196

Query: 121 DPVWAISSETVNSLLGLSLNFFFVLPAMNSVGIRLIDAPVLHPMSEGLFNFVIAWTLMFA 180
           DPVWAISSETVNSL+GLSLNFFFVLP MNSVGIRLIDAPVLHPMSEGLFNFVI WT MFA
Sbjct: 197 DPVWAISSETVNSLVGLSLNFFFVLPLMNSVGIRLIDAPVLHPMSEGLFNFVIGWTFMFA 256

Query: 181 PLLFTDRKRDQYSGSLDLLWGFQMFLTNTFLIPYMAIRLNEASEDSAPQPQSKLGTLMTN 240
           PLLFTD KRD+Y GSLD+LWGFQMFLTNTFLIPYMAIRLNEA  +  P+ +S+L ++MTN
Sbjct: 257 PLLFTDCKRDRYKGSLDVLWGFQMFLTNTFLIPYMAIRLNEACSEDTPRDRSQLASVMTN 316

Query: 241 GAPVVGVIGGAMCIISIIWSFVGRADGNFGGVAERWEFLIQYLSSERLAYAFIWDICLYS 300
           GAP+VG+IGGA+C++S +W+  GR DG+FGG+ ERWEFL+ YL SERLAYAFIWDI LY 
Sbjct: 317 GAPIVGLIGGAICLLSTLWALYGRMDGDFGGITERWEFLVSYLGSERLAYAFIWDIFLYI 376

Query: 301 VFQPWLIGENLQNVKESKIGVVSSLRFVPVVGLIAYLLFLKLDEE 341
           +FQ WLIG+NLQNV+ SK+G V+ LRFVPVVGL AYLLFL LDEE
Sbjct: 377 IFQAWLIGDNLQNVQLSKVGTVNYLRFVPVVGLTAYLLFLNLDEE 411

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BLAST of Csa6G031960 vs. TrEMBL
Match: A0A0D2VCB1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G081400 PE=4 SV=1)

HSP 1 Score: 436.8 bits (1122), Expect = 2.4e-119
Identity = 218/343 (63.56%), Postives = 260/343 (75.80%), Query Frame = 1


Query: 1   MAKAMIASQPLLSN---HSFPVIKPYTLTSPLSPFRFFRPQQPLLSPLISTTTPFSLSPN 60
           MA A++A+Q LL      + P   P++   P  P R+         P    TT FS+   
Sbjct: 1   MAMAVLATQALLCQTHCRALPRPTPFSSNPPPQPSRYPCKHHGETWP----TTSFSIL-- 60

Query: 61  RRNCSLTRPAARRKPTFVDSTDFSNDGDSNVRRLLQVLLWGAEAVYILWLFLLPYAPGDP 120
             +  +   A+RRK T + S+   +D D  +RR+L + LW AEAVYILWLFLLPYAPGDP
Sbjct: 61  -HSTPIVCRASRRKSTALSSSSEESDQDGPLRRVLHLSLWAAEAVYILWLFLLPYAPGDP 120

Query: 121 VWAISSETVNSLLGLSLNFFFVLPAMNSVGIRLIDAPVLHPMSEGLFNFVIAWTLMFAPL 180
           VWAISS T+N L+GLSLNFFF+LP  N+VGIRLIDAPVLHPMSEGLFNFVI WTLMFAPL
Sbjct: 121 VWAISSNTINELIGLSLNFFFILPLTNAVGIRLIDAPVLHPMSEGLFNFVIGWTLMFAPL 180

Query: 181 LFTDRKRDQYSGSLDLLWGFQMFLTNTFLIPYMAIRLNEASEDSAPQPQSKLGTLMTNGA 240
           LFTDRKRD+Y  SLD+LWG QMFLTNTFLIPYMAIRLNEA  DS P   S LG++MTNGA
Sbjct: 181 LFTDRKRDRYKSSLDVLWGLQMFLTNTFLIPYMAIRLNEADADSRPTKLSPLGSVMTNGA 240

Query: 241 PVVGVIGGAMCIISIIWSFVGRADGNFGGVAERWEFLIQYLSSERLAYAFIWDICLYSVF 300
            VVG+ GGA+C+ S IW+  GR DG FG + +RW+FL+ YL SERLAYAFIWDICLY++F
Sbjct: 241 AVVGLTGGAVCVFSAIWALYGRMDGEFGNITDRWQFLVSYLGSERLAYAFIWDICLYTIF 300

Query: 301 QPWLIGENLQNVKESKIGVVSSLRFVPVVGLIAYLLFLKLDEE 341
           QPWLIGENLQNV++SK+GVVS LRF+PVVGL+AYLLFL L+E+
Sbjct: 301 QPWLIGENLQNVEKSKVGVVSYLRFIPVVGLVAYLLFLNLEED 336

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BLAST of Csa6G031960 vs. TrEMBL
Match: G7JZC5_MEDTR (Transmembrane protein, putative OS=Medicago truncatula GN=MTR_5g054910 PE=4 SV=1)

HSP 1 Score: 431.4 bits (1108), Expect = 1.0e-117
Identity = 205/296 (69.26%), Postives = 248/296 (83.78%), Query Frame = 1


Query: 46  ISTTTPFSLSPNRRN--CSLTRPAARRKPTFVDSTDFSNDGDSNVRRLLQVLLWGAEAVY 105
           +S+  P  LS +RR   CS    A RRKPT + ++    +GD N++R+LQ+ LWGAEAVY
Sbjct: 47  LSSAKPLVLSNSRRTHLCS----AGRRKPTELATSSSDKEGDENLKRVLQIGLWGAEAVY 106

Query: 106 ILWLFLLPYAPGDPVWAISSETVNSLLGLSLNFFFVLPAMNSVGIRLIDAPVLHPMSEGL 165
           ILWLFLLPYAPGDPVWAISS+TVNSL+GLSLNFFF+LP +N VGIRLIDAPVLHPMSEGL
Sbjct: 107 ILWLFLLPYAPGDPVWAISSDTVNSLVGLSLNFFFILPFVNLVGIRLIDAPVLHPMSEGL 166

Query: 166 FNFVIAWTLMFAPLLFTDRKRDQYSGSLDLLWGFQMFLTNTFLIPYMAIRLNEASEDSAP 225
           FNFVI WT MFAPLLFTDRKRD+Y GSLD+LWG QMFLTNTFLIPYMAIR+N A +D+AP
Sbjct: 167 FNFVIGWTFMFAPLLFTDRKRDRYKGSLDVLWGLQMFLTNTFLIPYMAIRMNNADDDNAP 226

Query: 226 QPQSKLGTLMTNGAPVVGVIGGAMCIISIIWSFVGRADGNFGGVAERWEFLIQYLSSERL 285
              SKLG++MT GAP+VG+IGG +C+IS++W+  GR D NFGG+ +RWE+L+ YL SERL
Sbjct: 227 IKNSKLGSIMTTGAPLVGLIGGGICLISLLWALFGRMDANFGGIVDRWEYLVGYLGSERL 286

Query: 286 AYAFIWDICLYSVFQPWLIGENLQNVKESKIGVVSSLRFVPVVGLIAYLLFLKLDE 340
           AYAFIWDI LY++FQPWLIG+NLQNV+++K+ VV  LR+VPVVGL+AYLL L+  E
Sbjct: 287 AYAFIWDISLYTIFQPWLIGDNLQNVQQNKVAVVKYLRYVPVVGLMAYLLCLEPKE 338

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BLAST of Csa6G031960 vs. TrEMBL
Match: M5XDA0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007907mg PE=4 SV=1)

HSP 1 Score: 431.0 bits (1107), Expect = 1.3e-117
Identity = 222/340 (65.29%), Postives = 264/340 (77.65%), Query Frame = 1


Query: 8   SQPLL-SNHSFPVIKPYTLTSPLSPFRFFRPQQPLLSPLISTTTPFSLSP--NRRNCSLT 67
           SQPLL +N +    KP     P +    F  Q+P+ + L     P   SP  ++R+  L 
Sbjct: 20  SQPLLCTNRTIFSTKPSFSPRPKT---HFCTQRPVFAALDLQKWPSQQSPATHKRDSKLK 79

Query: 68  R---PAARRKPTFVDSTDFSNDGDSNVRRLLQVLLWGAEAVYILWLFLLPYAPGDPVWAI 127
                AARRKPT    T    + DS+  RLLQ++LW AEAVYILWLFLLPYAPGDPVWAI
Sbjct: 80  TLVCRAARRKPT----TTVQQENDSS-ERLLQIVLWVAEAVYILWLFLLPYAPGDPVWAI 139

Query: 128 SSETVNSLLGLSLNFFFVLPAMNSVGIRLIDAPVLHPMSEGLFNFVIAWTLMFAPLLFTD 187
           SS+TVNSL+GLSLNFFF+LP +NSV   LI+APVLHPMSEGLFNFVI WT MFAPLLFTD
Sbjct: 140 SSDTVNSLVGLSLNFFFILPLLNSVTAGLINAPVLHPMSEGLFNFVIGWTFMFAPLLFTD 199

Query: 188 RKRDQYSGSLDLLWGFQMFLTNTFLIPYMAIRLNEASEDSAPQPQSKLGTLMTNGAPVVG 247
           RKRD+Y GSLD+LWGFQMFLTNTFLIPYMAIRLNEA  D  P  +S+LG+++TNGAP+VG
Sbjct: 200 RKRDRYKGSLDVLWGFQMFLTNTFLIPYMAIRLNEAESDYTPSKRSQLGSVLTNGAPIVG 259

Query: 248 VIGGAMCIISIIWSFVGRADGNFGGVAERWEFLIQYLSSERLAYAFIWDICLYSVFQPWL 307
           ++GG +C+IS +W+  GR DGNFG +++RWEFLI YL SERLAYAFIWDI LY+VFQPWL
Sbjct: 260 LLGGVICLISALWALFGRMDGNFGSISDRWEFLISYLGSERLAYAFIWDIGLYTVFQPWL 319

Query: 308 IGENLQNVKESKIGVVSSLRFVPVVGLIAYLLFLKLDEEL 342
           IGENLQNV+ SKIG+V+ LRFVPVVGL+AYL+ L +DEEL
Sbjct: 320 IGENLQNVQSSKIGIVNYLRFVPVVGLVAYLVCLNMDEEL 351

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BLAST of Csa6G031960 vs. TAIR10
Match: AT3G25805.1 (AT3G25805.1 unknown protein)

HSP 1 Score: 400.2 bits (1027), Expect = 1.3e-111
Identity = 189/273 (69.23%), Postives = 223/273 (81.68%), Query Frame = 1


Query: 68  ARRKPTFVDSTDFSNDGDSNVRRLLQVLLWGAEAVYILWLFLLPYAPGDPVWAISSETVN 127
           ARRKP     T      D ++RR+++ LLW +EAVYILWLFLLPYAPGDPVWAISSETVN
Sbjct: 65  ARRKP----ETATVEVEDDSIRRIVRYLLWTSEAVYILWLFLLPYAPGDPVWAISSETVN 124

Query: 128 SLLGLSLNFFFVLPAMNSVGIRLIDAPVLHPMSEGLFNFVIAWTLMFAPLLFTDRKRDQY 187
           SLLGLSLNFFFVLP  N+ GI  + APVLHPM+EGLFNFVIAWTLMFAPLL+TDRKR++Y
Sbjct: 125 SLLGLSLNFFFVLPLTNAAGIHFLQAPVLHPMAEGLFNFVIAWTLMFAPLLYTDRKRNRY 184

Query: 188 SGSLDLLWGFQMFLTNTFLIPYMAIRLNEASEDSAPQPQSKLGTLMTNGAPVVGVIGGAM 247
             SLD+LW   MFLTNTFLIPYMA+RLN+A  D  P  +S+LG +MT GAP+VG+ G  +
Sbjct: 185 KSSLDVLWSLMMFLTNTFLIPYMALRLNDADPDDKPSKRSQLGEVMTKGAPIVGLTGATV 244

Query: 248 CIISIIWSFVGRADGNFGGVAERWEFLIQYLSSERLAYAFIWDICLYSVFQPWLIGENLQ 307
           C+IS +WS  GRADG+FGG+ +RW++LI YL SERLAYAFIWDICLY++FQPWLIGENLQ
Sbjct: 245 CLISALWSLYGRADGDFGGIMDRWQYLIGYLGSERLAYAFIWDICLYTIFQPWLIGENLQ 304

Query: 308 NVKESKIGVVSSLRFVPVVGLIAYLLFLKLDEE 341
           NVK++KI +V  LRFVPV GL+AY LFL L++E
Sbjct: 305 NVKKNKIELVKYLRFVPVFGLLAYHLFLNLEDE 333

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BLAST of Csa6G031960 vs. NCBI nr
Match: gi|449465643|ref|XP_004150537.1| (PREDICTED: uncharacterized protein LOC101210554 isoform X1 [Cucumis sativus])

HSP 1 Score: 686.4 bits (1770), Expect = 2.5e-194
Identity = 341/341 (100.00%), Postives = 341/341 (100.00%), Query Frame = 1


Query: 1   MAKAMIASQPLLSNHSFPVIKPYTLTSPLSPFRFFRPQQPLLSPLISTTTPFSLSPNRRN 60
           MAKAMIASQPLLSNHSFPVIKPYTLTSPLSPFRFFRPQQPLLSPLISTTTPFSLSPNRRN
Sbjct: 1   MAKAMIASQPLLSNHSFPVIKPYTLTSPLSPFRFFRPQQPLLSPLISTTTPFSLSPNRRN 60

Query: 61  CSLTRPAARRKPTFVDSTDFSNDGDSNVRRLLQVLLWGAEAVYILWLFLLPYAPGDPVWA 120
           CSLTRPAARRKPTFVDSTDFSNDGDSNVRRLLQVLLWGAEAVYILWLFLLPYAPGDPVWA
Sbjct: 61  CSLTRPAARRKPTFVDSTDFSNDGDSNVRRLLQVLLWGAEAVYILWLFLLPYAPGDPVWA 120

Query: 121 ISSETVNSLLGLSLNFFFVLPAMNSVGIRLIDAPVLHPMSEGLFNFVIAWTLMFAPLLFT 180
           ISSETVNSLLGLSLNFFFVLPAMNSVGIRLIDAPVLHPMSEGLFNFVIAWTLMFAPLLFT
Sbjct: 121 ISSETVNSLLGLSLNFFFVLPAMNSVGIRLIDAPVLHPMSEGLFNFVIAWTLMFAPLLFT 180

Query: 181 DRKRDQYSGSLDLLWGFQMFLTNTFLIPYMAIRLNEASEDSAPQPQSKLGTLMTNGAPVV 240
           DRKRDQYSGSLDLLWGFQMFLTNTFLIPYMAIRLNEASEDSAPQPQSKLGTLMTNGAPVV
Sbjct: 181 DRKRDQYSGSLDLLWGFQMFLTNTFLIPYMAIRLNEASEDSAPQPQSKLGTLMTNGAPVV 240

Query: 241 GVIGGAMCIISIIWSFVGRADGNFGGVAERWEFLIQYLSSERLAYAFIWDICLYSVFQPW 300
           GVIGGAMCIISIIWSFVGRADGNFGGVAERWEFLIQYLSSERLAYAFIWDICLYSVFQPW
Sbjct: 241 GVIGGAMCIISIIWSFVGRADGNFGGVAERWEFLIQYLSSERLAYAFIWDICLYSVFQPW 300

Query: 301 LIGENLQNVKESKIGVVSSLRFVPVVGLIAYLLFLKLDEEL 342
           LIGENLQNVKESKIGVVSSLRFVPVVGLIAYLLFLKLDEEL
Sbjct: 301 LIGENLQNVKESKIGVVSSLRFVPVVGLIAYLLFLKLDEEL 341

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BLAST of Csa6G031960 vs. NCBI nr
Match: gi|659089686|ref|XP_008445644.1| (PREDICTED: uncharacterized protein LOC103488603 [Cucumis melo])

HSP 1 Score: 542.0 bits (1395), Expect = 7.7e-151
Identity = 268/289 (92.73%), Postives = 277/289 (95.85%), Query Frame = 1


Query: 1   MAKAMIASQPLLSNHSFPVIKPYTLTSPLSPFRFFRPQQPLLSPLISTTTPFSLSPNRRN 60
           MAKAMIASQPLL N SFPVIKP+ LTSPLSPFRFFRPQQPLLSPLIST TPFSLSPNRRN
Sbjct: 1   MAKAMIASQPLLCNLSFPVIKPFALTSPLSPFRFFRPQQPLLSPLISTPTPFSLSPNRRN 60

Query: 61  CSLTRPAARRKPTFVDSTDFSNDGDSNVRRLLQVLLWGAEAVYILWLFLLPYAPGDPVWA 120
           CSLTRPAAR+KPTFVDS DFSN+G+S+VRRLLQ+LLWGAEAVYILWLFLLPYAPGDPVWA
Sbjct: 61  CSLTRPAARKKPTFVDSADFSNEGNSDVRRLLQILLWGAEAVYILWLFLLPYAPGDPVWA 120

Query: 121 ISSETVNSLLGLSLNFFFVLPAMNSVGIRLIDAPVLHPMSEGLFNFVIAWTLMFAPLLFT 180
           ISSETVNSL+GLSLNFFFVLPAMNSVGIR+IDAPVLHPMSEGLFNFVIAWTLMFAPLLFT
Sbjct: 121 ISSETVNSLVGLSLNFFFVLPAMNSVGIRVIDAPVLHPMSEGLFNFVIAWTLMFAPLLFT 180

Query: 181 DRKRDQYSGSLDLLWGFQMFLTNTFLIPYMAIRLNEASEDSAPQPQSKLGTLMTNGAPVV 240
           DRKRDQYSGSLDLLWG QMFLTNTFLIPYMAIRLNEASE SAPQPQSKLGTLMTNGAPVV
Sbjct: 181 DRKRDQYSGSLDLLWGLQMFLTNTFLIPYMAIRLNEASEYSAPQPQSKLGTLMTNGAPVV 240

Query: 241 GVIGGAMCIISIIWSFVGRADGNFGGVAERWEFLIQYLSSERLAYAFIW 290
           GVIGGA+CIISIIWSFVGRADGNFGGVAERWEFLIQYLSSERL     W
Sbjct: 241 GVIGGAICIISIIWSFVGRADGNFGGVAERWEFLIQYLSSERLKTLTNW 289

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BLAST of Csa6G031960 vs. NCBI nr
Match: gi|567890355|ref|XP_006437698.1| (hypothetical protein CICLE_v10031676mg [Citrus clementina])

HSP 1 Score: 443.7 bits (1140), Expect = 2.8e-121
Identity = 225/345 (65.22%), Postives = 260/345 (75.36%), Query Frame = 1


Query: 1   MAKAMIASQPLLSNHSFPVIKPYTLTSPLSPFRFFRPQQPLLSPLISTTTPFSLSPNRRN 60
           M+ A     P   NHS    K +    P   F         L P+            +R 
Sbjct: 77  MSVAAATPLPCFKNHSILSTKSFNSKPPRRHFDNATISSQSLPPV----------QKQRR 136

Query: 61  CSLTRP----AARRKPTFV-DSTDFSNDGDSNVRRLLQVLLWGAEAVYILWLFLLPYAPG 120
             LTR     AARRKPT   D++  S +G+ NVRR+LQ++LW AEAVYILWLFLLPYAPG
Sbjct: 137 VHLTRTVVCHAARRKPTVAADASKASAEGNDNVRRVLQIVLWAAEAVYILWLFLLPYAPG 196

Query: 121 DPVWAISSETVNSLLGLSLNFFFVLPAMNSVGIRLIDAPVLHPMSEGLFNFVIAWTLMFA 180
           DPVWAISSETVNSL+GLSLNFFFVLP MNSVGIRLIDAPVLHPMSEGLFNFVI WT MFA
Sbjct: 197 DPVWAISSETVNSLVGLSLNFFFVLPLMNSVGIRLIDAPVLHPMSEGLFNFVIGWTFMFA 256

Query: 181 PLLFTDRKRDQYSGSLDLLWGFQMFLTNTFLIPYMAIRLNEASEDSAPQPQSKLGTLMTN 240
           PLLFTD KRD+Y GSLD+LWGFQMFLTNTFLIPYMAIRLNEA  +  P+ +S+L ++MTN
Sbjct: 257 PLLFTDCKRDRYKGSLDVLWGFQMFLTNTFLIPYMAIRLNEACSEDTPRDRSQLASVMTN 316

Query: 241 GAPVVGVIGGAMCIISIIWSFVGRADGNFGGVAERWEFLIQYLSSERLAYAFIWDICLYS 300
           GAP+VG+IGGA+C++S +W+  GR DG+FGG+ ERWEFL+ YL SERLAYAFIWDI LY 
Sbjct: 317 GAPIVGLIGGAICLLSTLWALYGRMDGDFGGITERWEFLVSYLGSERLAYAFIWDIFLYI 376

Query: 301 VFQPWLIGENLQNVKESKIGVVSSLRFVPVVGLIAYLLFLKLDEE 341
           +FQ WLIG+NLQNV+ SK+G V+ LRFVPVVGL AYLLFL LDEE
Sbjct: 377 IFQAWLIGDNLQNVQLSKVGTVNYLRFVPVVGLTAYLLFLNLDEE 411

[Close]

BLAST of Csa6G031960 vs. NCBI nr
Match: gi|568861904|ref|XP_006484439.1| (PREDICTED: uncharacterized protein LOC102629880 [Citrus sinensis])

HSP 1 Score: 442.6 bits (1137), Expect = 6.3e-121
Identity = 225/345 (65.22%), Postives = 259/345 (75.07%), Query Frame = 1


Query: 1   MAKAMIASQPLLSNHSFPVIKPYTLTSPLSPFRFFRPQQPLLSPLISTTTPFSLSPNRRN 60
           M+ A     P   NHS    K +    P   F         L P+            +R 
Sbjct: 4   MSVAAATPLPCFKNHSILSTKSFNSKPPRRHFDNATIGSQSLPPV----------QKQRR 63

Query: 61  CSLTRP----AARRKPTFV-DSTDFSNDGDSNVRRLLQVLLWGAEAVYILWLFLLPYAPG 120
             LTR     AARRKPT   D++  S +G+ NVRR+LQ++LW AEAVYILWLFLLPYAPG
Sbjct: 64  VHLTRTVVCHAARRKPTVAADASKASAEGNDNVRRVLQIVLWAAEAVYILWLFLLPYAPG 123

Query: 121 DPVWAISSETVNSLLGLSLNFFFVLPAMNSVGIRLIDAPVLHPMSEGLFNFVIAWTLMFA 180
           DPVWAISSETVNSL+GLSLNFFFVLP MNSVGIRLIDAPVLHPMSEGLFNFVI WT MFA
Sbjct: 124 DPVWAISSETVNSLVGLSLNFFFVLPLMNSVGIRLIDAPVLHPMSEGLFNFVIGWTFMFA 183

Query: 181 PLLFTDRKRDQYSGSLDLLWGFQMFLTNTFLIPYMAIRLNEASEDSAPQPQSKLGTLMTN 240
           PLLFTD KRD+Y GSLD+LWGFQMFLTNTFLIPYMAIRLNEA  +  P+  S+L ++MTN
Sbjct: 184 PLLFTDCKRDRYKGSLDVLWGFQMFLTNTFLIPYMAIRLNEACSEDTPRDHSQLASVMTN 243

Query: 241 GAPVVGVIGGAMCIISIIWSFVGRADGNFGGVAERWEFLIQYLSSERLAYAFIWDICLYS 300
           GAP+VG+IGGA+C++S +W+  GR DG+FGG+ ERWEFL+ YL SERLAYAFIWDI LY 
Sbjct: 244 GAPIVGLIGGAICLLSTLWALYGRMDGDFGGITERWEFLVSYLGSERLAYAFIWDIFLYI 303

Query: 301 VFQPWLIGENLQNVKESKIGVVSSLRFVPVVGLIAYLLFLKLDEE 341
           +FQ WLIG+NLQNV+ SK+G V+ LRFVPVVGL AYLLFL LDEE
Sbjct: 304 IFQAWLIGDNLQNVQLSKVGTVNYLRFVPVVGLTAYLLFLNLDEE 338

[Close]

BLAST of Csa6G031960 vs. NCBI nr
Match: gi|823261890|ref|XP_012463682.1| (PREDICTED: uncharacterized protein LOC105783049 [Gossypium raimondii])

HSP 1 Score: 436.8 bits (1122), Expect = 3.5e-119
Identity = 218/343 (63.56%), Postives = 260/343 (75.80%), Query Frame = 1


Query: 1   MAKAMIASQPLLSN---HSFPVIKPYTLTSPLSPFRFFRPQQPLLSPLISTTTPFSLSPN 60
           MA A++A+Q LL      + P   P++   P  P R+         P    TT FS+   
Sbjct: 1   MAMAVLATQALLCQTHCRALPRPTPFSSNPPPQPSRYPCKHHGETWP----TTSFSIL-- 60

Query: 61  RRNCSLTRPAARRKPTFVDSTDFSNDGDSNVRRLLQVLLWGAEAVYILWLFLLPYAPGDP 120
             +  +   A+RRK T + S+   +D D  +RR+L + LW AEAVYILWLFLLPYAPGDP
Sbjct: 61  -HSTPIVCRASRRKSTALSSSSEESDQDGPLRRVLHLSLWAAEAVYILWLFLLPYAPGDP 120

Query: 121 VWAISSETVNSLLGLSLNFFFVLPAMNSVGIRLIDAPVLHPMSEGLFNFVIAWTLMFAPL 180
           VWAISS T+N L+GLSLNFFF+LP  N+VGIRLIDAPVLHPMSEGLFNFVI WTLMFAPL
Sbjct: 121 VWAISSNTINELIGLSLNFFFILPLTNAVGIRLIDAPVLHPMSEGLFNFVIGWTLMFAPL 180

Query: 181 LFTDRKRDQYSGSLDLLWGFQMFLTNTFLIPYMAIRLNEASEDSAPQPQSKLGTLMTNGA 240
           LFTDRKRD+Y  SLD+LWG QMFLTNTFLIPYMAIRLNEA  DS P   S LG++MTNGA
Sbjct: 181 LFTDRKRDRYKSSLDVLWGLQMFLTNTFLIPYMAIRLNEADADSRPTKLSPLGSVMTNGA 240

Query: 241 PVVGVIGGAMCIISIIWSFVGRADGNFGGVAERWEFLIQYLSSERLAYAFIWDICLYSVF 300
            VVG+ GGA+C+ S IW+  GR DG FG + +RW+FL+ YL SERLAYAFIWDICLY++F
Sbjct: 241 AVVGLTGGAVCVFSAIWALYGRMDGEFGNITDRWQFLVSYLGSERLAYAFIWDICLYTIF 300

Query: 301 QPWLIGENLQNVKESKIGVVSSLRFVPVVGLIAYLLFLKLDEE 341
           QPWLIGENLQNV++SK+GVVS LRF+PVVGL+AYLLFL L+E+
Sbjct: 301 QPWLIGENLQNVEKSKVGVVSYLRFIPVVGLVAYLLFLNLEED 336

The following BLAST results are available for this feature:

BLAST of Csa6G031960 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KC53_CUCSA	1.8e-194	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G031960 PE=4 SV=1	[more]
V4SSX2_9ROSI	2.0e-121	65.22	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10031676mg PE=4 SV=1	[more]
A0A0D2VCB1_GOSRA	2.4e-119	63.56	Uncharacterized protein OS=Gossypium raimondii GN=B456_013G081400 PE=4 SV=1	[more]
G7JZC5_MEDTR	1.0e-117	69.26	Transmembrane protein, putative OS=Medicago truncatula GN=MTR_5g054910 PE=4 SV=1	[more]
M5XDA0_PRUPE	1.3e-117	65.29	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007907mg PE=4 SV=1	[more]

BLAST of Csa6G031960 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G25805.1	1.3e-111	69.23	unknown protein	[more]

BLAST of Csa6G031960 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449465643\|ref\|XP_004150537.1\|	2.5e-194	100.00	PREDICTED: uncharacterized protein LOC101210554 isoform X1 [Cucumis sativus]	[more]
gi\|659089686\|ref\|XP_008445644.1\|	7.7e-151	92.73	PREDICTED: uncharacterized protein LOC103488603 [Cucumis melo]	[more]
gi\|567890355\|ref\|XP_006437698.1\|	2.8e-121	65.22	hypothetical protein CICLE_v10031676mg [Citrus clementina]	[more]
gi\|568861904\|ref\|XP_006484439.1\|	6.3e-121	65.22	PREDICTED: uncharacterized protein LOC102629880 [Citrus sinensis]	[more]
gi\|823261890\|ref\|XP_012463682.1\|	3.5e-119	63.56	PREDICTED: uncharacterized protein LOC105783049 [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process	GO:0015031	protein transport
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU097248	cucumber EST collection version 3.0	transcribed_cluster
CU118546	cucumber EST collection version 3.0	transcribed_cluster
CU119583	cucumber EST collection version 3.0	transcribed_cluster
CU152750	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa6G031960.1	Csa6G031960.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU152750	CU152750	transcribed_cluster
CU118546	CU118546	transcribed_cluster
CU119583	CU119583	transcribed_cluster
CU097248	CU097248	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36367	FAMILY NOT NAMED	coord: 7..341 score: 1.0E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa6G031960	Cla007983	Watermelon (97103) v1	cuwmB459
Csa6G031960	MELO3C011551	Melon (DHL92) v3.5.1	cumeB476
Csa6G031960	ClCG08G005160	Watermelon (Charleston Gray)	cuwcgB499
Csa6G031960	Lsi08G003960	Bottle gourd (USVL1VR-Ls)	culsiB472
Csa6G031960	MELO3C011551.2	Melon (DHL92) v3.6.1	cumedB455
Csa6G031960	Cla97C08G148000	Watermelon (97103) v2	cuwmbB491
Csa6G031960	Bhi04G001576	Wax gourd	cuwgoB594
Csa6G031960	CSPI06G03100	Wild cucumber (PI 183967)	cpicuB314
Csa6G031960	Cucsa.365410	Cucumber (Gy14) v1	cgycuB511
Csa6G031960	CmaCh04G020590	Cucurbita maxima (Rimu)	cmacuB773
Csa6G031960	CmoCh04G021560	Cucurbita moschata (Rifu)	cmocuB765
Csa6G031960	Cp4.1LG01g17930	Cucurbita pepo (Zucchini)	cpecuB466
Csa6G031960	CsGy6G003170	Cucumber (Gy14) v2	cgybcuB282
Csa6G031960	Carg27340	Silver-seed gourd	carcuB0516

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa6G031960	Silver-seed gourd	carcuB0966
Csa6G031960	Cucurbita maxima (Rimu)	cmacuB314
Csa6G031960	Cucurbita moschata (Rifu)	cmocuB302
Csa6G031960	Cucurbita pepo (Zucchini)	cpecuB194