Csa6G028940 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa6G028940
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	At1g68440/T2E12_1
Location	Chr6 : 2463425 .. 2464354 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGTTCCTGTTCTAAACAGGATTACTGAATTAGGACCAAATCTGGGATCGCTTCCCAATCCCAGTTTTCTCTCTAGAATTTTCACTTCCGTTTTCCCATCCCAACATTTTTGGAAATGGGCTGCTCTCATTATTGCTTTCTTGGCCACATTTCCCGGAATAATCAATCGTGTTAAGGTTTTTATCATCGTCTGTCGTCGGAGAACTAAAACTACGTCGATTTCCGAACCTCTCTATCGATCTCTCCACTTCGGAGACAGCCGTGGTTTAGTTTCAAAGAATCTCAAATCTCCTCTGCTTTCAAGCTCTGAATCGGAGGATGAGAATGAGAGGGATCGGGAACACAACAACGACTCCGATTTTCGGGTTAAAGGCTCAAGTCTGTTTTCTGGTGAATTTGACGGTGGCTGTCGTTCTCGTCACCGGCGACGGCCCTGCAACGGTGGAGGCAACGGAGATTTGTTTTCGTGGCCATGTTTTGGGTTGGAGAGAAGCGTAGTGAGGCAATGGGGTGATGTGAAATTGAAATGCGAGTTTGAGGAGCTGAGTGGGAGTATGATTTCGTTGTACGACGTGAATGAAGAGGCGGAGATTTGTTCAATTTTGAGCGGCGGAGGTTCGCTGAAAGCGGCGGCAGTATCGCCGAGAAGAATGGTGGTGGCTGCCAATGAGGGTGTTTCGGCGAATGTATCACTGAAGCTCTGGGACACGCGTGGCAGAAGCCGGACGCCGGTGGTGGGGATGGAGTGGGATTCACCGTCCGGAAATATTGTTGATGTTTATTACGAGGATGTAGGAAATTTGTATGTTAGAGATAATGAAGCGGCCGGAATAATGATAGGCGATGTCAGAAGAGCTAGTTCAGGGTGGGAGAAATTGACGGCGGGCGGTGGTGAAGGCTTGTGGGAAGTGGGACAGTAACGCCGT

mRNA sequence

ATGGAAGTTCCTGTTCTAAACAGGATTACTGAATTAGGACCAAATCTGGGATCGCTTCCCAATCCCAGTTTTCTCTCTAGAATTTTCACTTCCGTTTTCCCATCCCAACATTTTTGGAAATGGGCTGCTCTCATTATTGCTTTCTTGGCCACATTTCCCGGAATAATCAATCGTGTTAAGGTTTTTATCATCGTCTGTCGTCGGAGAACTAAAACTACGTCGATTTCCGAACCTCTCTATCGATCTCTCCACTTCGGAGACAGCCGTGGTTTAGTTTCAAAGAATCTCAAATCTCCTCTGCTTTCAAGCTCTGAATCGGAGGATGAGAATGAGAGGGATCGGGAACACAACAACGACTCCGATTTTCGGGTTAAAGGCTCAAGTCTGTTTTCTGGTGAATTTGACGGTGGCTGTCGTTCTCGTCACCGGCGACGGCCCTGCAACGGTGGAGGCAACGGAGATTTGTTTTCGTGGCCATGTTTTGGGTTGGAGAGAAGCGTAGTGAGGCAATGGGGTGATGTGAAATTGAAATGCGAGTTTGAGGAGCTGAGTGGGAGTATGATTTCGTTGTACGACGTGAATGAAGAGGCGGAGATTTGTTCAATTTTGAGCGGCGGAGGTTCGCTGAAAGCGGCGGCAGTATCGCCGAGAAGAATGGTGGTGGCTGCCAATGAGGGTGTTTCGGCGAATGTATCACTGAAGCTCTGGGACACGCGTGGCAGAAGCCGGACGCCGGTGGTGGGGATGGAGTGGGATTCACCGTCCGGAAATATTGTTGATGTTTATTACGAGGATGTAGGAAATTTGTATGTTAGAGATAATGAAGCGGCCGGAATAATGATAGGCGATGTCAGAAGAGCTAGTTCAGGGTGGGAGAAATTGACGGCGGGCGGTGGTGAAGGCTTGTGGGAAGTGGGACAGTAA

Coding sequence (CDS)

ATGGAAGTTCCTGTTCTAAACAGGATTACTGAATTAGGACCAAATCTGGGATCGCTTCCCAATCCCAGTTTTCTCTCTAGAATTTTCACTTCCGTTTTCCCATCCCAACATTTTTGGAAATGGGCTGCTCTCATTATTGCTTTCTTGGCCACATTTCCCGGAATAATCAATCGTGTTAAGGTTTTTATCATCGTCTGTCGTCGGAGAACTAAAACTACGTCGATTTCCGAACCTCTCTATCGATCTCTCCACTTCGGAGACAGCCGTGGTTTAGTTTCAAAGAATCTCAAATCTCCTCTGCTTTCAAGCTCTGAATCGGAGGATGAGAATGAGAGGGATCGGGAACACAACAACGACTCCGATTTTCGGGTTAAAGGCTCAAGTCTGTTTTCTGGTGAATTTGACGGTGGCTGTCGTTCTCGTCACCGGCGACGGCCCTGCAACGGTGGAGGCAACGGAGATTTGTTTTCGTGGCCATGTTTTGGGTTGGAGAGAAGCGTAGTGAGGCAATGGGGTGATGTGAAATTGAAATGCGAGTTTGAGGAGCTGAGTGGGAGTATGATTTCGTTGTACGACGTGAATGAAGAGGCGGAGATTTGTTCAATTTTGAGCGGCGGAGGTTCGCTGAAAGCGGCGGCAGTATCGCCGAGAAGAATGGTGGTGGCTGCCAATGAGGGTGTTTCGGCGAATGTATCACTGAAGCTCTGGGACACGCGTGGCAGAAGCCGGACGCCGGTGGTGGGGATGGAGTGGGATTCACCGTCCGGAAATATTGTTGATGTTTATTACGAGGATGTAGGAAATTTGTATGTTAGAGATAATGAAGCGGCCGGAATAATGATAGGCGATGTCAGAAGAGCTAGTTCAGGGTGGGAGAAATTGACGGCGGGCGGTGGTGAAGGCTTGTGGGAAGTGGGACAGTAA

Protein sequence

MEVPVLNRITELGPNLGSLPNPSFLSRIFTSVFPSQHFWKWAALIIAFLATFPGIINRVKVFIIVCRRRTKTTSISEPLYRSLHFGDSRGLVSKNLKSPLLSSSESEDENERDREHNNDSDFRVKGSSLFSGEFDGGCRSRHRRRPCNGGGNGDLFSWPCFGLERSVVRQWGDVKLKCEFEELSGSMISLYDVNEEAEICSILSGGGSLKAAAVSPRRMVVAANEGVSANVSLKLWDTRGRSRTPVVGMEWDSPSGNIVDVYYEDVGNLYVRDNEAAGIMIGDVRRASSGWEKLTAGGGEGLWEVGQ*

Homology

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BLAST of Csa6G028940 vs. TrEMBL
Match: A0A0A0KDT7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G028940 PE=4 SV=1)

HSP 1 Score: 626.7 bits (1615), Expect = 1.5e-176
Identity = 307/307 (100.00%), Postives = 307/307 (100.00%), Query Frame = 1


Query: 1   MEVPVLNRITELGPNLGSLPNPSFLSRIFTSVFPSQHFWKWAALIIAFLATFPGIINRVK 60
           MEVPVLNRITELGPNLGSLPNPSFLSRIFTSVFPSQHFWKWAALIIAFLATFPGIINRVK
Sbjct: 1   MEVPVLNRITELGPNLGSLPNPSFLSRIFTSVFPSQHFWKWAALIIAFLATFPGIINRVK 60

Query: 61  VFIIVCRRRTKTTSISEPLYRSLHFGDSRGLVSKNLKSPLLSSSESEDENERDREHNNDS 120
           VFIIVCRRRTKTTSISEPLYRSLHFGDSRGLVSKNLKSPLLSSSESEDENERDREHNNDS
Sbjct: 61  VFIIVCRRRTKTTSISEPLYRSLHFGDSRGLVSKNLKSPLLSSSESEDENERDREHNNDS 120

Query: 121 DFRVKGSSLFSGEFDGGCRSRHRRRPCNGGGNGDLFSWPCFGLERSVVRQWGDVKLKCEF 180
           DFRVKGSSLFSGEFDGGCRSRHRRRPCNGGGNGDLFSWPCFGLERSVVRQWGDVKLKCEF
Sbjct: 121 DFRVKGSSLFSGEFDGGCRSRHRRRPCNGGGNGDLFSWPCFGLERSVVRQWGDVKLKCEF 180

Query: 181 EELSGSMISLYDVNEEAEICSILSGGGSLKAAAVSPRRMVVAANEGVSANVSLKLWDTRG 240
           EELSGSMISLYDVNEEAEICSILSGGGSLKAAAVSPRRMVVAANEGVSANVSLKLWDTRG
Sbjct: 181 EELSGSMISLYDVNEEAEICSILSGGGSLKAAAVSPRRMVVAANEGVSANVSLKLWDTRG 240

Query: 241 RSRTPVVGMEWDSPSGNIVDVYYEDVGNLYVRDNEAAGIMIGDVRRASSGWEKLTAGGGE 300
           RSRTPVVGMEWDSPSGNIVDVYYEDVGNLYVRDNEAAGIMIGDVRRASSGWEKLTAGGGE
Sbjct: 241 RSRTPVVGMEWDSPSGNIVDVYYEDVGNLYVRDNEAAGIMIGDVRRASSGWEKLTAGGGE 300

Query: 301 GLWEVGQ 308
           GLWEVGQ
Sbjct: 301 GLWEVGQ 307

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BLAST of Csa6G028940 vs. TrEMBL
Match: A0A0A0KR50_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G609760 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 6.3e-34
Identity = 100/313 (31.95%), Postives = 161/313 (51.44%), Query Frame = 1


Query: 1   MEVPVLNRITELGPNLGSLPNPSFLSRIFTS------VFPSQHFWKWAALIIAFLATFPG 60
           ME+PV+NR + L   + SLPNP+ L +I TS      +  S   WKW+A+IIA +ATF G
Sbjct: 1   MEIPVINRFSGLESGMSSLPNPTLLPQILTSPSGFQTLSRSLDLWKWSAVIIAVVATFSG 60

Query: 61  IINRVKVFIIVCRRRTKTTSISEPLYRSLHFGDSRGLVSKNLKSPLLSSSESEDENERDR 120
           +INR+K+  ++ RR+ +   + E +Y S    +     S +  S + S  E +D +E   
Sbjct: 61  VINRIKLLFVIFRRQKRI--LQEIVYDSDSDTEYSVDDSASSVSSVWSEFEEDDVDEPAS 120

Query: 121 EHN-----NDSDFRVKGSSLFSGE--FDGGCRSRHRRRPCNGGGNGDLFSWPCFGLERSV 180
             +      D DF V+GS  +  +       R RHRR   N  G G+ FSW  F   +SV
Sbjct: 121 SSSFSWDLTDQDFHVRGSDYYLNDDKTKQTLRLRHRRSFHNQDGEGEQFSWADFTGGKSV 180

Query: 181 VRQWGDVKLKCEFEELSGSMISLYDVNEEAEICSILSGGGSLKAAAVSPRRMVVAANEGV 240
           V+ W +++ + +  +   + I ++DV +E  I SIL+G   +  +  S   ++++    V
Sbjct: 181 VKLWDNLRFEFDHCDSDTNEIRVHDVIKEQTIGSILAGKSQIAPSLTST--LLLSTTTNV 240

Query: 241 SANVSLKLWDTRGRSRTPVVGMEWDSPSGNIVDVYYEDVGNLYVRDNEAAGIMIGDVRRA 300
           S+  S+ +WDTR   + P +  EW   +G ++ V +     +Y+R+     I +GDVR  
Sbjct: 241 SSKTSVNIWDTRMGCQIPALIAEWKPVAGKVLGVKFSGEQKVYLRNESGEKITVGDVRNM 300

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BLAST of Csa6G028940 vs. TrEMBL
Match: A0A067JZL3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18342 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 4.5e-32
Identity = 105/321 (32.71%), Postives = 156/321 (48.60%), Query Frame = 1


Query: 1   MEVPVLNRITELGPNLGSLPNPSFLSRIFTS-----VFPSQHFWKWAALIIAFLATFPGI 60
           ME+PV+NRI  L   + SL NPSFLS+IF S     +  +  FWKW ALI+AF+A+F  I
Sbjct: 1   MEIPVINRIGNLETGIASLQNPSFLSQIFASSGVEKIHQAYSFWKWGALILAFVASFSTI 60

Query: 61  INRVKVFIIVCRRRTKTTSISEPLYRSLHFG-DSRGLVSKNLKSPLLSSSESEDENERDR 120
           INR+K+ +I  +      S S P+    H+  DS      +     +S  E E+E+E   
Sbjct: 61  INRIKILVIRIQNHYLIPS-SPPISTQEHYDFDS----DTDTSCSSMSDDEEEEEDEPSL 120

Query: 121 EHNN--------DSDFRVKGSSLFSGEFDGGCRSRHRRRPCNGGGNGDLFSWPCFGLERS 180
             ++        D DFRV+GS      FD   ++R  RR  N        SW  F   ++
Sbjct: 121 SSSSSSQSWRSIDEDFRVRGSG---HHFDNQFQNRSLRRRRNSSLEDLFSSWSEFTNGKN 180

Query: 181 VVRQWGDVK--LKCEFEELSGSMISLYDVNEEAEICSILSGGGSLKAAAVSPRR-MVVAA 240
           VV+ W ++   L    E  S + +S+YD+++E ++ SI      + A   S     V+ +
Sbjct: 181 VVKLWDNLGFGLGLNLENESTNCVSVYDMHKEQDVFSIFGEKCKIPAVCTSSSSPAVIFS 240

Query: 241 NEGVSANVSLKLWDTRGRSRTPVVGMEWDSPSGNIVDVYYEDVGNLYVRDNEAAGIMIGD 300
            E  ++   LKLWDTR  SR P +  EW    G  V V       +YVRD+    + +GD
Sbjct: 241 GESNTSGHLLKLWDTRLGSRLPAILAEWKPRLGKFVGVSAAGNEKVYVRDDITGRLTVGD 300

Query: 301 VRRASSGWEKLTAGGGEGLWE 305
           +R+ SS     T    +  W+
Sbjct: 301 IRKVSSPLANATDSDVDTWWD 313

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BLAST of Csa6G028940 vs. TrEMBL
Match: A0A0D2SJV6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G192000 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 4.5e-32
Identity = 106/322 (32.92%), Postives = 165/322 (51.24%), Query Frame = 1


Query: 1   MEVPVLNRITELGPNLGSLPNPSFLSRIFT-----SVFPSQHFWKWAALIIAFLATFPGI 60
           ME+PV+NRI++   ++ +L NPSFLS+++       ++ + HFWKW ALI+A LA+   I
Sbjct: 1   MEIPVINRISDFEASISTLNNPSFLSQVYALSGIDKIYQAYHFWKWGALILALLASLSTI 60

Query: 61  INRVKVFIIVCRRRTKTTSISEPLYRSLHFGDSRGLVSKNLKSPLLSSSESEDENERDRE 120
           INR+K+ +I  RR       S PL     F         + ++   SSS++E E E    
Sbjct: 61  INRLKILVIRFRRNHSLP--SRPLLYDTDF-------DTDSETSSCSSSDNELEYEEPSA 120

Query: 121 HNN----DSDFRVKGSSLFSGE--FDGGCRSRHRRRPCNGGGNGDLFSW-PCFGLERSVV 180
             N    D DFRV+GS  F  +   + G   R RR        GDLFSW       +SVV
Sbjct: 121 SQNWRQVDEDFRVRGSGHFIDDQWRNSGSTLRKRR-----SSIGDLFSWAEELTNGKSVV 180

Query: 181 RQWGDVKLKCEFE-ELSGSMISLYDVNEEAEICSIL---SGGGSLKAAAVSPRRMVVAAN 240
           + W ++ L    + + S + +++YD+N+E +I SI    S   ++ A++ SP  +V A  
Sbjct: 181 KLWDNLGLGFRLDLDESDNFLNVYDINKETKIRSIFGEKSDFQAVSASSSSPAVVVSAGG 240

Query: 241 EGVSANVSLKLWDTRGRSRTPVVGMEW--DSPSGNIVDVYYEDVGNLYVRDNEAAGIMIG 300
           +  +  V++  WDTR   R PV+  EW  + P   I  V  + V  +Y+R +    + +G
Sbjct: 241 DSSTRRVAVSAWDTRLDCRQPVILTEWSPEKPMEKISAVNTDGVEKVYIRGDVKGMLTVG 300

Query: 301 DVRRASSGWEKLTAGGGEGLWE 305
           D+R+A S    LT    E  W+
Sbjct: 301 DMRKARSPLRNLTDSEVETWWD 308

[Close]

BLAST of Csa6G028940 vs. TrEMBL
Match: K4BXB6_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 1.0e-31
Identity = 99/313 (31.63%), Postives = 160/313 (51.12%), Query Frame = 1


Query: 1   MEVPVLNRITELGPNLGSLPNPSFLSRIFT-----SVFPSQHFWKWAALIIAFLATFPGI 60
           ME P +N I++    +  L NPS +SR F+      V     FWKW ALI+A LATF  +
Sbjct: 1   MEFPEINMISDFEAGVKCLQNPSMVSRFFSLSPIEKVPQVYSFWKWGALILAILATFSSL 60

Query: 61  INRVKVFIIVCRRRTKTTSISEPLYRSLHFGDSRGLVSKNLKSPLLSSSESEDENERDR- 120
           I ++K+  I  RR   +   +EPL + L  G+   +   + +    SS+ +   ++ D  
Sbjct: 61  IRKIKLLFIYVRRIKPS---AEPLLQYL--GEDFDISDDDDEDDKCSSAAAPSSDDEDLL 120

Query: 121 EHNNDSDFRVKGSSLFSGEFDGGCRSRHRRRPCNGGGNGDLFSWPCFGLERSVVRQWGDV 180
           +   D DF V GS  +  E  G  R R RR         + F W  F   ++VV+ W  +
Sbjct: 121 DQQIDEDFTVAGSCFYFRE-KGNLRFRRRRNSL------ERFPWTEFSAGKNVVKLWDSL 180

Query: 181 KLKC--EFEELSGSMISLYDVNEEAEICSILSGGGSLKAAAVSPRRMVVAANEGVSAN-V 240
            L    E+E+LS S++SL+D+N+E +I ++ +G   + + A++   MV+++      N V
Sbjct: 181 ALGLDYEYEDLSNSVVSLWDLNQEEKIGNLFTGSSKVPSVAMASPSMVLSSEVKNDRNGV 240

Query: 241 SLKLWDTRGRSRTPVVGMEWDSPSGNIVDVYYEDVGNLYVRDNEAAGIMIGDVRRASSGW 300
            L  +DTR RS +P +  +W   SG +V V    VG +YVR+  A  + +GD+R   +  
Sbjct: 241 VLAAYDTRMRSNSPAIYADWGKGSGKVVGVNGSGVGKVYVRNESAGKLTVGDLRNVKTPL 298

Query: 301 EKLTAGGGEGLWE 305
           EK+    G+  W+
Sbjct: 301 EKI---DGDTWWD 298

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BLAST of Csa6G028940 vs. TAIR10
Match: AT1G68440.1 (AT1G68440.1 unknown protein)

HSP 1 Score: 112.1 bits (279), Expect = 6.2e-25
Identity = 101/328 (30.79%), Postives = 142/328 (43.29%), Query Frame = 1


Query: 1   MEVPVLNRITELGPNLGSLPNPSFLSR-IFTSVFPSQH----FWKWAALIIAFLATFPGI 60
           MEVPV+NRI +    + S+ +PSFLSR +  S     H    FWKW ALIIAFLA F   
Sbjct: 1   MEVPVINRIRDFEVGINSINDPSFLSRSVAVSGIGKLHQAYGFWKWGALIIAFLAYFTNF 60

Query: 61  INRVKVFIIVCRRRTKTTSISEPLYRSLHFGDSRGLVSKNLKSPLLSSSESEDENERDRE 120
           ++++   ++  R R    S+S P     +  DS      +  S + S  E ++E+E D E
Sbjct: 61  VSKLNSLVV--RLRKIDVSVSSPTLFDDYDSDS----DVSCSSTVSSDDEKDEEDEADDE 120

Query: 121 HNN----------DSDFRVKGSSLFSGEFD----GGCRSRHRRRPCNGGGNGDLFSWPCF 180
             +          +  FRV+GS  +  + D    G C    RR     G  GDLFSWP  
Sbjct: 121 DEDVDSIFNRRRVNGGFRVRGSDYYDDDDDQGDNGNCTWMGRR---YSGSFGDLFSWPDL 180

Query: 181 G--LERSVVRQWGDVKLKCEFEELSGSMISLYDVNEEAEICSILSGGGSLKAAAVSPRRM 240
           G      VV+ W  +       ++ G        + E  + + L    S      S    
Sbjct: 181 GGIGSSGVVKLWDHL-------DIDGD-------DHENVVATFLKNYNS-----TSSPFF 240

Query: 241 VVAANEGVSANVSLKLWDTRGRSRTPVVGMEWDSPS---GNIVDVYYEDVGNLYVRDNEA 300
             A  +GV A V +K  D R   R P +  EW  P    GNI+ V    V  +YVRD+ +
Sbjct: 241 WAAEKKGVDA-VKVKACDPRAGFRMPALLAEWRQPGRLLGNIIGVDTGGVEKVYVRDDVS 299

Query: 301 AGIMIGDVRRASSGWEKLTAGGGEGLWE 305
             I +GD+R+ +     LT    E  W+
Sbjct: 301 GEIAVGDLRKFNGVLTDLTECEAETWWD 299

[Close]

BLAST of Csa6G028940 vs. TAIR10
Match: AT1G25400.1 (AT1G25400.1 unknown protein)

HSP 1 Score: 90.9 bits (224), Expect = 1.5e-18
Identity = 85/307 (27.69%), Postives = 131/307 (42.67%), Query Frame = 1


Query: 1   MEVPVLNRITELGPNLGSLPNPSFLSRIFT-----SVFPSQHFWKWAA-LIIAFLATFPG 60
           MEVP++NRI +    + S+ +PS+LSR         +  +  FWKW A L++AF A+F  
Sbjct: 1   MEVPIINRIGDFDMGINSINDPSYLSRALAVSGVGKLHQAYSFWKWGALLLLAFFASFTS 60

Query: 61  IINRVKVFIIVCRRRTKTTSISEPLYRSLHFGDSRGLVSKNLKSPLLSSSESEDENERDR 120
           +  R+K   +V R R    S+        +  DS    S +      SS E +DE++   
Sbjct: 61  LTTRIKT--LVFRLRNVNVSLPSQTLLCNYDSDSDWSFSSD------SSDEEKDEDDNKE 120

Query: 121 EHNNDSDFRVKGSSLFSGEFDGGCR-SRHRRRPCNGGGNGDLFSWPCFGLERSVVRQWGD 180
           + + + D RV+    +  + D G   S    R C+ G  GDL      G    VV+ W +
Sbjct: 121 DDSVNGDSRVQRFGYYHDDDDKGISGSVPWLRRCS-GSFGDLLDLGSSG----VVKLWDN 180

Query: 181 VKLKCEFEELSGSMISLYDVNEEAEICSILS--GGGSLKAAAVSPRRMVVAANEGVSANV 240
           +                    E + + S  S  G  SL ++AV     ++AA +  S  +
Sbjct: 181 LDFN----------------GEGSPVASFFSKCGSYSLLSSAV-----LLAAEKKGSDGL 240

Query: 241 SLKLWDTRGRSRTPVVGMEWDSPS---GNIVDVYYEDVGNLYVRDNEAAGIMIGDVRRAS 296
            +  WD R     P +  EW  P    G I+ V   DV  +YV D+    I +GD+R  +
Sbjct: 241 EVSAWDARVGFGVPALLAEWKQPGRLLGKIIRVDVGDVDKIYVGDDVEGEITVGDMRMVN 273

[Close]

BLAST of Csa6G028940 vs. NCBI nr
Match: gi|778710060|ref|XP_011656511.1| (PREDICTED: uncharacterized protein LOC105435751 [Cucumis sativus])

HSP 1 Score: 626.7 bits (1615), Expect = 2.1e-176
Identity = 307/307 (100.00%), Postives = 307/307 (100.00%), Query Frame = 1


Query: 1   MEVPVLNRITELGPNLGSLPNPSFLSRIFTSVFPSQHFWKWAALIIAFLATFPGIINRVK 60
           MEVPVLNRITELGPNLGSLPNPSFLSRIFTSVFPSQHFWKWAALIIAFLATFPGIINRVK
Sbjct: 1   MEVPVLNRITELGPNLGSLPNPSFLSRIFTSVFPSQHFWKWAALIIAFLATFPGIINRVK 60

Query: 61  VFIIVCRRRTKTTSISEPLYRSLHFGDSRGLVSKNLKSPLLSSSESEDENERDREHNNDS 120
           VFIIVCRRRTKTTSISEPLYRSLHFGDSRGLVSKNLKSPLLSSSESEDENERDREHNNDS
Sbjct: 61  VFIIVCRRRTKTTSISEPLYRSLHFGDSRGLVSKNLKSPLLSSSESEDENERDREHNNDS 120

Query: 121 DFRVKGSSLFSGEFDGGCRSRHRRRPCNGGGNGDLFSWPCFGLERSVVRQWGDVKLKCEF 180
           DFRVKGSSLFSGEFDGGCRSRHRRRPCNGGGNGDLFSWPCFGLERSVVRQWGDVKLKCEF
Sbjct: 121 DFRVKGSSLFSGEFDGGCRSRHRRRPCNGGGNGDLFSWPCFGLERSVVRQWGDVKLKCEF 180

Query: 181 EELSGSMISLYDVNEEAEICSILSGGGSLKAAAVSPRRMVVAANEGVSANVSLKLWDTRG 240
           EELSGSMISLYDVNEEAEICSILSGGGSLKAAAVSPRRMVVAANEGVSANVSLKLWDTRG
Sbjct: 181 EELSGSMISLYDVNEEAEICSILSGGGSLKAAAVSPRRMVVAANEGVSANVSLKLWDTRG 240

Query: 241 RSRTPVVGMEWDSPSGNIVDVYYEDVGNLYVRDNEAAGIMIGDVRRASSGWEKLTAGGGE 300
           RSRTPVVGMEWDSPSGNIVDVYYEDVGNLYVRDNEAAGIMIGDVRRASSGWEKLTAGGGE
Sbjct: 241 RSRTPVVGMEWDSPSGNIVDVYYEDVGNLYVRDNEAAGIMIGDVRRASSGWEKLTAGGGE 300

Query: 301 GLWEVGQ 308
           GLWEVGQ
Sbjct: 301 GLWEVGQ 307

[Close]

BLAST of Csa6G028940 vs. NCBI nr
Match: gi|659089675|ref|XP_008445638.1| (PREDICTED: uncharacterized protein LOC103488596 [Cucumis melo])

HSP 1 Score: 510.0 bits (1312), Expect = 2.9e-141
Identity = 257/306 (83.99%), Postives = 270/306 (88.24%), Query Frame = 1


Query: 1   MEVPVLNRITELGPNLGSLPNPSFLSRIFTSVFPSQHFWKWAALIIAFLATFPGIINRVK 60
           MEVPVLNRITELG +LGSLPNP+FLSRIFTS FPSQHFWKW ALIIA LATF GIINRVK
Sbjct: 35  MEVPVLNRITELGAHLGSLPNPNFLSRIFTSFFPSQHFWKWGALIIALLATFTGIINRVK 94

Query: 61  VFIIVCRRRTKTTSISEPLYRSLHFGDSRGLVSKNLKSPLLSSSESEDENERDREHNNDS 120
           VFII+CRRRTKTTSISEPLYRSLH  DS GLVSKNLKSP LSSSESEDENER RE NNDS
Sbjct: 95  VFIIICRRRTKTTSISEPLYRSLHCRDSGGLVSKNLKSPPLSSSESEDENERGRERNNDS 154

Query: 121 DFRVKGSSLFSGEFDGGCRSRHRRRPCNGGGNGDLFSWPCFGLERSVVRQWGDVKLKCEF 180
           +FRVK SS FS E DGGC SR RRR CNGG NGDLF WPCFGL+RSVVRQWGDV    EF
Sbjct: 155 NFRVKVSSRFSCELDGGCHSRLRRRHCNGGSNGDLFPWPCFGLDRSVVRQWGDVISNSEF 214

Query: 181 EELSGSMISLYDVNEEAEICSILSGGGSLKAAAVSPRRMVVAANEGVSANVSLKLWDTRG 240
           EELSGSMISLYD NEEAEICSI + GGSLKA AVSPRRMVVAA+EGVSANVSLKLWDTRG
Sbjct: 215 EELSGSMISLYDDNEEAEICSIFNEGGSLKAVAVSPRRMVVAASEGVSANVSLKLWDTRG 274

Query: 241 RSRTPVVGMEWDSPSGNIVDVYYEDVGNLYVRDNEAAGIMIGDVRRASSGWEKLTAGGGE 300
           RSRTPVV +EWDSPS NIVDVYYEDV N+Y+RDN AAGIM+GDVR+ASSG EKLTAG G 
Sbjct: 275 RSRTPVVAVEWDSPSRNIVDVYYEDVENVYLRDNGAAGIMVGDVRKASSGSEKLTAGDGG 334

Query: 301 GLWEVG 307
           GLW +G
Sbjct: 335 GLWNLG 340

[Close]

BLAST of Csa6G028940 vs. NCBI nr
Match: gi|659091551|ref|XP_008446606.1| (PREDICTED: uncharacterized protein LOC103489289 [Cucumis melo])

HSP 1 Score: 155.6 bits (392), Expect = 1.4e-34
Identity = 101/315 (32.06%), Postives = 164/315 (52.06%), Query Frame = 1


Query: 1   MEVPVLNRITELGPNLGSLPNPSFLSRIFTS------VFPSQHFWKWAALIIAFLATFPG 60
           ME+PV+NR + L   + SLPNP+ L +I TS      +  S   WKW+A+IIA +ATF G
Sbjct: 1   MEIPVINRFSGLESGMSSLPNPTLLPQILTSPSGFQTISRSLDLWKWSAVIIAVVATFSG 60

Query: 61  IINRVKVFIIVCRRRTKTTSISEPLYRSLHFGDSRGLVSKNLKSPLLSSSESEDENERDR 120
           +INR+K+  ++ RR+ +   + E +Y S    DS   V  +  S     SE ED++  + 
Sbjct: 61  VINRIKLLFVIFRRQKRI--LQEIVYDS--DSDSEYSVDDSATSVSSVWSEFEDDDADEP 120

Query: 121 EHNN-------DSDFRVKGSSLFSGE--FDGGCRSRHRRRPCNGGGNGDLFSWPCFGLER 180
             ++       D DF V+GS  +  +       R RHRR   N  G  + FSW  F   +
Sbjct: 121 ASSSPFSWDLTDRDFHVRGSDYYLNDDKTKRTLRLRHRRSFHNQDGEDEQFSWADFTGGK 180

Query: 181 SVVRQWGDVKLKCEFEELSGSMISLYDVNEEAEICSILSGGGSLKAAAVSPRRMVVAANE 240
           SVV+ W +++ + +      + I ++DV +E  I SI++G   +  +  S   ++++   
Sbjct: 181 SVVKLWDNLRFEFDHYHSDTNEIRVHDVIKEQTIGSIVAGKSQIAPSLTST--LLLSTTT 240

Query: 241 GVSANVSLKLWDTRGRSRTPVVGMEWDSPSGNIVDVYYEDVGNLYVRDNEAAGIMIGDVR 300
            VS+  S+ +WDTR   + P +  EW   +G ++ V + +   +Y+R+ +A  I +GDVR
Sbjct: 241 NVSSKTSVNIWDTRVGCQIPALIAEWKPVAGKVLGVKFSNDQKVYIRNEDAGKITVGDVR 300

[Close]

BLAST of Csa6G028940 vs. NCBI nr
Match: gi|778706001|ref|XP_011655777.1| (PREDICTED: uncharacterized protein LOC105435585 [Cucumis sativus])

HSP 1 Score: 152.9 bits (385), Expect = 9.0e-34
Identity = 100/313 (31.95%), Postives = 161/313 (51.44%), Query Frame = 1


Query: 1   MEVPVLNRITELGPNLGSLPNPSFLSRIFTS------VFPSQHFWKWAALIIAFLATFPG 60
           ME+PV+NR + L   + SLPNP+ L +I TS      +  S   WKW+A+IIA +ATF G
Sbjct: 1   MEIPVINRFSGLESGMSSLPNPTLLPQILTSPSGFQTLSRSLDLWKWSAVIIAVVATFSG 60

Query: 61  IINRVKVFIIVCRRRTKTTSISEPLYRSLHFGDSRGLVSKNLKSPLLSSSESEDENERDR 120
           +INR+K+  ++ RR+ +   + E +Y S    +     S +  S + S  E +D +E   
Sbjct: 61  VINRIKLLFVIFRRQKRI--LQEIVYDSDSDTEYSVDDSASSVSSVWSEFEEDDVDEPAS 120

Query: 121 EHN-----NDSDFRVKGSSLFSGE--FDGGCRSRHRRRPCNGGGNGDLFSWPCFGLERSV 180
             +      D DF V+GS  +  +       R RHRR   N  G G+ FSW  F   +SV
Sbjct: 121 SSSFSWDLTDQDFHVRGSDYYLNDDKTKQTLRLRHRRSFHNQDGEGEQFSWADFTGGKSV 180

Query: 181 VRQWGDVKLKCEFEELSGSMISLYDVNEEAEICSILSGGGSLKAAAVSPRRMVVAANEGV 240
           V+ W +++ + +  +   + I ++DV +E  I SIL+G   +  +  S   ++++    V
Sbjct: 181 VKLWDNLRFEFDHCDSDTNEIRVHDVIKEQTIGSILAGKSQIAPSLTST--LLLSTTTNV 240

Query: 241 SANVSLKLWDTRGRSRTPVVGMEWDSPSGNIVDVYYEDVGNLYVRDNEAAGIMIGDVRRA 300
           S+  S+ +WDTR   + P +  EW   +G ++ V +     +Y+R+     I +GDVR  
Sbjct: 241 SSKTSVNIWDTRMGCQIPALIAEWKPVAGKVLGVKFSGEQKVYLRNESGEKITVGDVRNM 300

[Close]

BLAST of Csa6G028940 vs. NCBI nr
Match: gi|802681373|ref|XP_012082103.1| (PREDICTED: uncharacterized protein LOC105642039 [Jatropha curcas])

HSP 1 Score: 146.7 bits (369), Expect = 6.5e-32
Identity = 105/321 (32.71%), Postives = 156/321 (48.60%), Query Frame = 1


Query: 1   MEVPVLNRITELGPNLGSLPNPSFLSRIFTS-----VFPSQHFWKWAALIIAFLATFPGI 60
           ME+PV+NRI  L   + SL NPSFLS+IF S     +  +  FWKW ALI+AF+A+F  I
Sbjct: 1   MEIPVINRIGNLETGIASLQNPSFLSQIFASSGVEKIHQAYSFWKWGALILAFVASFSTI 60

Query: 61  INRVKVFIIVCRRRTKTTSISEPLYRSLHFG-DSRGLVSKNLKSPLLSSSESEDENERDR 120
           INR+K+ +I  +      S S P+    H+  DS      +     +S  E E+E+E   
Sbjct: 61  INRIKILVIRIQNHYLIPS-SPPISTQEHYDFDS----DTDTSCSSMSDDEEEEEDEPSL 120

Query: 121 EHNN--------DSDFRVKGSSLFSGEFDGGCRSRHRRRPCNGGGNGDLFSWPCFGLERS 180
             ++        D DFRV+GS      FD   ++R  RR  N        SW  F   ++
Sbjct: 121 SSSSSSQSWRSIDEDFRVRGSG---HHFDNQFQNRSLRRRRNSSLEDLFSSWSEFTNGKN 180

Query: 181 VVRQWGDVK--LKCEFEELSGSMISLYDVNEEAEICSILSGGGSLKAAAVSPRR-MVVAA 240
           VV+ W ++   L    E  S + +S+YD+++E ++ SI      + A   S     V+ +
Sbjct: 181 VVKLWDNLGFGLGLNLENESTNCVSVYDMHKEQDVFSIFGEKCKIPAVCTSSSSPAVIFS 240

Query: 241 NEGVSANVSLKLWDTRGRSRTPVVGMEWDSPSGNIVDVYYEDVGNLYVRDNEAAGIMIGD 300
            E  ++   LKLWDTR  SR P +  EW    G  V V       +YVRD+    + +GD
Sbjct: 241 GESNTSGHLLKLWDTRLGSRLPAILAEWKPRLGKFVGVSAAGNEKVYVRDDITGRLTVGD 300

Query: 301 VRRASSGWEKLTAGGGEGLWE 305
           +R+ SS     T    +  W+
Sbjct: 301 IRKVSSPLANATDSDVDTWWD 313

The following BLAST results are available for this feature:

BLAST of Csa6G028940 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KDT7_CUCSA	1.5e-176	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G028940 PE=4 SV=1	[more]
A0A0A0KR50_CUCSA	6.3e-34	31.95	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G609760 PE=4 SV=1	[more]
A0A067JZL3_JATCU	4.5e-32	32.71	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18342 PE=4 SV=1	[more]
A0A0D2SJV6_GOSRA	4.5e-32	32.92	Uncharacterized protein OS=Gossypium raimondii GN=B456_005G192000 PE=4 SV=1	[more]
K4BXB6_SOLLC	1.0e-31	31.63	Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1	[more]

BLAST of Csa6G028940 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G68440.1	6.2e-25	30.79	unknown protein	[more]
AT1G25400.1	1.5e-18	27.69	unknown protein	[more]

BLAST of Csa6G028940 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778710060\|ref\|XP_011656511.1\|	2.1e-176	100.00	PREDICTED: uncharacterized protein LOC105435751 [Cucumis sativus]	[more]
gi\|659089675\|ref\|XP_008445638.1\|	2.9e-141	83.99	PREDICTED: uncharacterized protein LOC103488596 [Cucumis melo]	[more]
gi\|659091551\|ref\|XP_008446606.1\|	1.4e-34	32.06	PREDICTED: uncharacterized protein LOC103489289 [Cucumis melo]	[more]
gi\|778706001\|ref\|XP_011655777.1\|	9.0e-34	31.95	PREDICTED: uncharacterized protein LOC105435585 [Cucumis sativus]	[more]
gi\|802681373\|ref\|XP_012082103.1\|	6.5e-32	32.71	PREDICTED: uncharacterized protein LOC105642039 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa6G028940.1	Csa6G028940.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36715	FAMILY NOT NAMED	coord: 2..304 score: 2.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa6G028940	Cla007966	Watermelon (97103) v1	cuwmB459
Csa6G028940	MELO3C011535	Melon (DHL92) v3.5.1	cumeB476
Csa6G028940	ClCG08G005010	Watermelon (Charleston Gray)	cuwcgB499
Csa6G028940	MELO3C011535.2	Melon (DHL92) v3.6.1	cumedB455
Csa6G028940	Cla97C08G147890	Watermelon (97103) v2	cuwmbB491
Csa6G028940	Bhi04G001587	Wax gourd	cuwgoB594
Csa6G028940	CSPI06G03020	Wild cucumber (PI 183967)	cpicuB314
Csa6G028940	Cucsa.365470	Cucumber (Gy14) v1	cgycuB511
Csa6G028940	CmaCh04G020640	Cucurbita maxima (Rimu)	cmacuB773
Csa6G028940	CmoCh15G009530	Cucurbita moschata (Rifu)	cmocuB302
Csa6G028940	CmoCh04G021610	Cucurbita moschata (Rifu)	cmocuB765
Csa6G028940	Cp4.1LG13g06790	Cucurbita pepo (Zucchini)	cpecuB194
Csa6G028940	Carg26885	Silver-seed gourd	carcuB0966

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa6G028940	Cucurbita pepo (Zucchini)	cpecuB466
Csa6G028940	Bottle gourd (USVL1VR-Ls)	culsiB472
Csa6G028940	Cucumber (Gy14) v2	cgybcuB282
Csa6G028940	Cucurbita maxima (Rimu)	cmacuB314