Csa6G022360 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa6G022360
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUbiquitin carboxyl-terminal hydrolase-like protein; contains IPR021099 (Plant organelle RNA recognition domain)
LocationChr6 : 2305567 .. 2307811 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGCTGGGTTCCGACTATCTCTATTTCCCTCTCTAACCCACCGATCTGTTTAGCCAGCCATTGCCGCCATCGCCATTGTTCTAGTTTTGGGTAAGATTTTGGATGTTTTCTCGGGTTAAGCTTAGTCCACCACTGGATGAACGCTTAATACTTGTTGCCCATGGTATTTAGATTTAGATCTGAGTTTTTGACAGCAGCGTGCAAGAGCGTTTAGACCGTTCTGGTACGTAGTAAGGCTTTGAGATGGCTGGGCTCGTTTTAGTTTTCAGGAGTTCTGGGTTTTGATCTTAGGTTGTGAATGTTTGTAGGATCGAATTAACTGCTCGGGGATTTTGAACTAGCGTTGGTTTTAGTCGCACTTTGGGTGAGTGCTGGAAACCTTTAAACACGAGTTTTATGCTTTTGTGTAAGCCAATAGTTTGGAATTTAAGCTGGTATTTGGTGTGTGATAGAGGTTAATCCAAGATTCTTGCTCTACATCAGAAGGGATATTATTTTCCTGTTATTGGGCTTTTAACATTGAGGTACGTAGGCTCACTACTGAAACGAAGCTAGGTTGGGATCTGTGTGCTGATAGGATGAACTTTGTGTGAATTTTAATATGATGTCTGATTGATGTATGTGAGATGTGTACGTATGATGAAATGATGATCAATGTTGCGAAAGCTCCGGCATCCTGAAGACTCCTTCAAATTTAAGGCTGATGTTTTCTTTATGTTTTGTGGGAAGTTGATGGAATTCATATGTTGATGGATGGTAGAAGATGGTTGCTTGGTTGTTTAGCAGGCTTAAACTCTCTGGTTTCTTATGTAAAAACCAGAGGGGCTTGAATTTAAATTACCTGCAAGGTCGTTATCTAGTAAACATAAGACTAAAATGGGTGAAAGATAAAGACTTAGATACTGTAGTGAGTGCTGAGAAAGACCTTAAGGCTGTTTGCTTTCTTGTGTCTATAATCTCTTCAAGTCCCGAACATTGCTTACCGGTCTACCATCTGCGTCGTCATCGTCGGCAGCTTGGTATTCCAAATGATGTCAAGATGTCTACCTTCATTAGGAGATATCCTTCCATCTTTCATGAGTCACATATTCTCGATAGTGCAGGCACTCGTGTGCCATCATTTTGCTTAACTCCAGAAGCTAGGGAACTTCATGCGGAGCAAATCATTGTCCTTCGTCAGTGTTGGACAGATCTTCGATCTAGGCTTTGCAGATTGCTAATGCTTACTAGTGGTTGCACACTTCCTCTACAGACAATTGACCAGTTAAGATGGGACATGGGGCTGCCATATGATTATCAGAACTCTTTCATTCCATATAACCATGACATGTTTTCGTTCATCCGGCTCCAAGATCATCGTATTGGGTTGAAACTTCTGAAATGGGATAATGACCTTGCTGTTTCTGAACTGCAGAAGAATGCTGCTTCCCAACAAATGGAAGAAGACATAAGAAATGGCTATTTGGCCTTTCCAATCGGATTTACAAGGGGTTTTGGACTGAATAGAAAATGCATGGATTGGTTAAAAGAATGGCAGACGCTCCCTTACACTTCTCCATATTGTGATGCCTCTCATTTGGATCCCCGTACTGATGTATCTGAAAAGAGGATTGTCGGAGTCTTTCATGAGCTTCTTCACCTTACCTTGCAAAAGAAAACTGAACGGAAGAACGTAAGCAACCTTCGAAAACCATTCTCTTTGCCTCAGAAGTTTACGAAAGTCTTTGAGCGTCATCCTGGTATCTTTTACATCTCTAAGAAGGATGACACGCAGACTGTAATCCTTCGAGAAGCATATGATGGTGATAAGCTTGTACAGAAACATCCTCTTGTTAGTATCAGGGAAAGATTTACAAGCATGTTGAGGAAAGGCCAACTAGATAGAAGTAGAGGTTTGTACAAAAAAGATCCATCTGGTCACTTTCATAATGACGAAGTGAATGAAACGCTATATAGTTCTGAAGAAGTGTCCGATCATAACATGCTTTTGGAATATGATTCGGAATCAGATGGTCTGATTGACAACAACTGCTAAAGAAGTTGCCATAATTTTACAGCCACCTAAGCATTCTTTTGAAACTTTCATGCACAGATTAGCAGAATATAGGGAGAACCAACCTTTAAGTTTGTAAGCAACCTGTCCGTCAACATGGTTTTGTTTCTCTTATAAAACAGTGCAGTTATTTTATACTATGAAATTGCGTAACCCTTTCTTATGCTCCTTTAGTTTTAGTTTTTTGTTTTCT

mRNA sequence

ATGGTTGCTTGGTTGTTTAGCAGGCTTAAACTCTCTGGTTTCTTATGTAAAAACCAGAGGGGCTTGAATTTAAATTACCTGCAAGGTCGTTATCTAGTAAACATAAGACTAAAATGGGTGAAAGATAAAGACTTAGATACTGTAGTGAGTGCTGAGAAAGACCTTAAGGCTGTTTGCTTTCTTGTGTCTATAATCTCTTCAAGTCCCGAACATTGCTTACCGGTCTACCATCTGCGTCGTCATCGTCGGCAGCTTGGTATTCCAAATGATGTCAAGATGTCTACCTTCATTAGGAGATATCCTTCCATCTTTCATGAGTCACATATTCTCGATAGTGCAGGCACTCGTGTGCCATCATTTTGCTTAACTCCAGAAGCTAGGGAACTTCATGCGGAGCAAATCATTGTCCTTCGTCAGTGTTGGACAGATCTTCGATCTAGGCTTTGCAGATTGCTAATGCTTACTAGTGGTTGCACACTTCCTCTACAGACAATTGACCAGTTAAGATGGGACATGGGGCTGCCATATGATTATCAGAACTCTTTCATTCCATATAACCATGACATGTTTTCGTTCATCCGGCTCCAAGATCATCGTATTGGGTTGAAACTTCTGAAATGGGATAATGACCTTGCTGTTTCTGAACTGCAGAAGAATGCTGCTTCCCAACAAATGGAAGAAGACATAAGAAATGGCTATTTGGCCTTTCCAATCGGATTTACAAGGGGTTTTGGACTGAATAGAAAATGCATGGATTGGTTAAAAGAATGGCAGACGCTCCCTTACACTTCTCCATATTGTGATGCCTCTCATTTGGATCCCCGTACTGATGTATCTGAAAAGAGGATTGTCGGAGTCTTTCATGAGCTTCTTCACCTTACCTTGCAAAAGAAAACTGAACGGAAGAACGTAAGCAACCTTCGAAAACCATTCTCTTTGCCTCAGAAGTTTACGAAAGTCTTTGAGCGTCATCCTGGTATCTTTTACATCTCTAAGAAGGATGACACGCAGACTGTAATCCTTCGAGAAGCATATGATGGTGATAAGCTTGTACAGAAACATCCTCTTGTTAGTATCAGGGAAAGATTTACAAGCATGTTGAGGAAAGGCCAACTAGATAGAAGTAGAGGTTTGTACAAAAAAGATCCATCTGGTCACTTTCATAATGACGAAGTGAATGAAACGCTATATAGTTCTGAAGAAGTGTCCGATCATAACATGCTTTTGGAATATGATTCGGAATCAGATGGTCTGATTGACAACAACTGCTAA

Coding sequence (CDS)

ATGGTTGCTTGGTTGTTTAGCAGGCTTAAACTCTCTGGTTTCTTATGTAAAAACCAGAGGGGCTTGAATTTAAATTACCTGCAAGGTCGTTATCTAGTAAACATAAGACTAAAATGGGTGAAAGATAAAGACTTAGATACTGTAGTGAGTGCTGAGAAAGACCTTAAGGCTGTTTGCTTTCTTGTGTCTATAATCTCTTCAAGTCCCGAACATTGCTTACCGGTCTACCATCTGCGTCGTCATCGTCGGCAGCTTGGTATTCCAAATGATGTCAAGATGTCTACCTTCATTAGGAGATATCCTTCCATCTTTCATGAGTCACATATTCTCGATAGTGCAGGCACTCGTGTGCCATCATTTTGCTTAACTCCAGAAGCTAGGGAACTTCATGCGGAGCAAATCATTGTCCTTCGTCAGTGTTGGACAGATCTTCGATCTAGGCTTTGCAGATTGCTAATGCTTACTAGTGGTTGCACACTTCCTCTACAGACAATTGACCAGTTAAGATGGGACATGGGGCTGCCATATGATTATCAGAACTCTTTCATTCCATATAACCATGACATGTTTTCGTTCATCCGGCTCCAAGATCATCGTATTGGGTTGAAACTTCTGAAATGGGATAATGACCTTGCTGTTTCTGAACTGCAGAAGAATGCTGCTTCCCAACAAATGGAAGAAGACATAAGAAATGGCTATTTGGCCTTTCCAATCGGATTTACAAGGGGTTTTGGACTGAATAGAAAATGCATGGATTGGTTAAAAGAATGGCAGACGCTCCCTTACACTTCTCCATATTGTGATGCCTCTCATTTGGATCCCCGTACTGATGTATCTGAAAAGAGGATTGTCGGAGTCTTTCATGAGCTTCTTCACCTTACCTTGCAAAAGAAAACTGAACGGAAGAACGTAAGCAACCTTCGAAAACCATTCTCTTTGCCTCAGAAGTTTACGAAAGTCTTTGAGCGTCATCCTGGTATCTTTTACATCTCTAAGAAGGATGACACGCAGACTGTAATCCTTCGAGAAGCATATGATGGTGATAAGCTTGTACAGAAACATCCTCTTGTTAGTATCAGGGAAAGATTTACAAGCATGTTGAGGAAAGGCCAACTAGATAGAAGTAGAGGTTTGTACAAAAAAGATCCATCTGGTCACTTTCATAATGACGAAGTGAATGAAACGCTATATAGTTCTGAAGAAGTGTCCGATCATAACATGCTTTTGGAATATGATTCGGAATCAGATGGTCTGATTGACAACAACTGCTAA

Protein sequence

MVAWLFSRLKLSGFLCKNQRGLNLNYLQGRYLVNIRLKWVKDKDLDTVVSAEKDLKAVCFLVSIISSSPEHCLPVYHLRRHRRQLGIPNDVKMSTFIRRYPSIFHESHILDSAGTRVPSFCLTPEARELHAEQIIVLRQCWTDLRSRLCRLLMLTSGCTLPLQTIDQLRWDMGLPYDYQNSFIPYNHDMFSFIRLQDHRIGLKLLKWDNDLAVSELQKNAASQQMEEDIRNGYLAFPIGFTRGFGLNRKCMDWLKEWQTLPYTSPYCDASHLDPRTDVSEKRIVGVFHELLHLTLQKKTERKNVSNLRKPFSLPQKFTKVFERHPGIFYISKKDDTQTVILREAYDGDKLVQKHPLVSIRERFTSMLRKGQLDRSRGLYKKDPSGHFHNDEVNETLYSSEEVSDHNMLLEYDSESDGLIDNNC*
Homology
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BLAST of Csa6G022360 vs. Swiss-Prot
Match: RPD1_ARATH (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana GN=RPD1 PE=1 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.9e-26
Identity = 99/357 (27.73%), Postives = 174/357 (48.74%), Query Frame = 1 

Query: 40  VKDKDLDTVVSAEKDLKAVCFLVSIISSSPEHCLPVYHLRRHRRQLGIP-NDVKMSTFIR 99
           V+D   D  +  EK ++ V    S+I S P H + +  L    R+LG+     +   F+ 
Sbjct: 47  VRDHGYDNYMEVEKKIRKVVKFHSLILSQPNHTIAISLLDTLARRLGLGFKQHEPGAFLL 106

Query: 100 RYPSIFHESHILDSAGTRVPSFCLTPEARE-LHAEQIIVLRQCWTDLRSRLCRLLMLTSG 159
           ++P +F    I +    R+    LT +A + +  E   VL Q   D  +RL +L+M+++ 
Sbjct: 107 KFPHVFE---IYEHPVQRILYCRLTRKALDQIRHEHEAVLDQI-PDAVTRLRKLVMMSNT 166

Query: 160 CTLPLQTIDQLRWDMGLPYDYQNSFIPYNHDMFSFIRLQDHRIG-LKLLKWDNDLAVSEL 219
             + L+ +   R + GLP D++ S I  +   F  I  ++ R   +++++ D +L++  +
Sbjct: 167 GRIRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLIDGEETRDKYIEIVEKDPNLSICAI 226

Query: 220 QKNAASQQMEE--DIRNGYLAFPIGFTRGFGLNRKCMDWLKEWQTLPYTSPYCDASHLDP 279
           ++    +   +  D  +   +F + F  GF + +     + +WQ LPY SPY D S  D 
Sbjct: 227 ERVREIEYRTKGIDAEDVRFSFVVNFPPGFKIGKYFRIAVWKWQRLPYWSPYEDISGYDL 286

Query: 280 RTDVS----EKRIVGVFHELLHLTLQKKTERKNVSNLRKPFSLPQKFTKVFERHPGIFYI 339
           R+  +    EKR V   HELL LT++KK   + +++ R   +LP+K  +   +H GIFYI
Sbjct: 287 RSMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHFRNVMNLPKKLKEFLLQHQGIFYI 346

Query: 340 SKKDD---TQTVILREAYDGDKLVQKHPLVSIRERFTSML----RKGQLDRSRGLYK 381
           S + +     TV LRE Y   +LV+ + +   R R   ++    RK ++D     Y+
Sbjct: 347 STRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRLAELVLMSPRKAKVDAELVRYR 399

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BLAST of Csa6G022360 vs. TrEMBL
Match: A0A0A0KAR1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G022360 PE=4 SV=1)

HSP 1 Score: 872.8 bits (2254), Expect = 1.6e-250
Identity = 423/423 (100.00%), Postives = 423/423 (100.00%), Query Frame = 1 

Query: 1   MVAWLFSRLKLSGFLCKNQRGLNLNYLQGRYLVNIRLKWVKDKDLDTVVSAEKDLKAVCF 60
           MVAWLFSRLKLSGFLCKNQRGLNLNYLQGRYLVNIRLKWVKDKDLDTVVSAEKDLKAVCF
Sbjct: 1   MVAWLFSRLKLSGFLCKNQRGLNLNYLQGRYLVNIRLKWVKDKDLDTVVSAEKDLKAVCF 60

Query: 61  LVSIISSSPEHCLPVYHLRRHRRQLGIPNDVKMSTFIRRYPSIFHESHILDSAGTRVPSF 120
           LVSIISSSPEHCLPVYHLRRHRRQLGIPNDVKMSTFIRRYPSIFHESHILDSAGTRVPSF
Sbjct: 61  LVSIISSSPEHCLPVYHLRRHRRQLGIPNDVKMSTFIRRYPSIFHESHILDSAGTRVPSF 120

Query: 121 CLTPEARELHAEQIIVLRQCWTDLRSRLCRLLMLTSGCTLPLQTIDQLRWDMGLPYDYQN 180
           CLTPEARELHAEQIIVLRQCWTDLRSRLCRLLMLTSGCTLPLQTIDQLRWDMGLPYDYQN
Sbjct: 121 CLTPEARELHAEQIIVLRQCWTDLRSRLCRLLMLTSGCTLPLQTIDQLRWDMGLPYDYQN 180

Query: 181 SFIPYNHDMFSFIRLQDHRIGLKLLKWDNDLAVSELQKNAASQQMEEDIRNGYLAFPIGF 240
           SFIPYNHDMFSFIRLQDHRIGLKLLKWDNDLAVSELQKNAASQQMEEDIRNGYLAFPIGF
Sbjct: 181 SFIPYNHDMFSFIRLQDHRIGLKLLKWDNDLAVSELQKNAASQQMEEDIRNGYLAFPIGF 240

Query: 241 TRGFGLNRKCMDWLKEWQTLPYTSPYCDASHLDPRTDVSEKRIVGVFHELLHLTLQKKTE 300
           TRGFGLNRKCMDWLKEWQTLPYTSPYCDASHLDPRTDVSEKRIVGVFHELLHLTLQKKTE
Sbjct: 241 TRGFGLNRKCMDWLKEWQTLPYTSPYCDASHLDPRTDVSEKRIVGVFHELLHLTLQKKTE 300

Query: 301 RKNVSNLRKPFSLPQKFTKVFERHPGIFYISKKDDTQTVILREAYDGDKLVQKHPLVSIR 360
           RKNVSNLRKPFSLPQKFTKVFERHPGIFYISKKDDTQTVILREAYDGDKLVQKHPLVSIR
Sbjct: 301 RKNVSNLRKPFSLPQKFTKVFERHPGIFYISKKDDTQTVILREAYDGDKLVQKHPLVSIR 360

Query: 361 ERFTSMLRKGQLDRSRGLYKKDPSGHFHNDEVNETLYSSEEVSDHNMLLEYDSESDGLID 420
           ERFTSMLRKGQLDRSRGLYKKDPSGHFHNDEVNETLYSSEEVSDHNMLLEYDSESDGLID
Sbjct: 361 ERFTSMLRKGQLDRSRGLYKKDPSGHFHNDEVNETLYSSEEVSDHNMLLEYDSESDGLID 420

Query: 421 NNC 424
           NNC
Sbjct: 421 NNC 423

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BLAST of Csa6G022360 vs. TrEMBL
Match: M5XWR3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006119mg PE=4 SV=1)

HSP 1 Score: 547.4 bits (1409), Expect = 1.6e-152
Identity = 274/417 (65.71%), Postives = 324/417 (77.70%), Query Frame = 1 

Query: 2   VAWLFSRLKLSGFLCKNQRGLNLNYLQGRYLVNIRLKWVKDKDLDTVVSAEKDLKAVCFL 61
           + W F  +K+ GF          NY   R LVN++LKWVKD+ LD VV+AE+DLKA C L
Sbjct: 1   MVWFFLFVKVGGFGFLRGCQHGFNYQHKRGLVNVKLKWVKDRGLDAVVTAERDLKAACIL 60

Query: 62  VSIISSSPEHCLPVYHLRRHRRQLGIPNDVKMSTFIRRYPSIFHESHILDSAGTRVPSFC 121
           VSIISSSP+ CLP+Y L  HR QL +P D+K+STFIR++PS+F ESH   S G RVP F 
Sbjct: 61  VSIISSSPQCCLPIYRLSCHRGQLSLPCDLKLSTFIRKFPSVFVESHTFWSGGARVPCFS 120

Query: 122 LTPEARELHAEQIIVLRQCWTDLRSRLCRLLMLTSGCTLPLQTIDQLRWDMGLPYDYQNS 181
           LTPEA +L+ E++ VL+Q   DL +RL +LLMLT G TLPLQT+DQL+WD+GLPYDYQ+S
Sbjct: 121 LTPEALQLYHEELNVLQQNQMDLINRLQKLLMLTQGWTLPLQTLDQLKWDLGLPYDYQHS 180

Query: 182 FIPYNHDMFSFIRLQDHRIGLKLLKWDNDLAVSELQKNAASQQMEEDIRNGYLAFPIGFT 241
            IP++ D+FSFIRL D R+GLKLL WD DLAVS+LQKN+A QQ EED R+G LAFP+GFT
Sbjct: 181 VIPHHPDLFSFIRLPDDRVGLKLLSWDEDLAVSQLQKNSAIQQKEEDARSGCLAFPVGFT 240

Query: 242 RGFGLNRKCMDWLKEWQTLPYTSPYCDASHLDPRTDVSEKRIVGVFHELLHLTLQKKTER 301
           RGFGL RKCM+WLKEWQTLPYTSPY DAS+LDPRTDVSEKRIVGVFHELL LT+ KKTER
Sbjct: 241 RGFGLKRKCMEWLKEWQTLPYTSPYSDASYLDPRTDVSEKRIVGVFHELLQLTIHKKTER 300

Query: 302 KNVSNLRKPFSLPQKFTKVFERHPGIFYISKKDDTQTVILREAYDGDKLVQKHPLVSIRE 361
           KNVSNLRKP +LPQKFTKVFERHPGIFYISKK  TQTVILREAY+  +L+QKHP V +RE
Sbjct: 301 KNVSNLRKPLALPQKFTKVFERHPGIFYISKKCATQTVILREAYNHQQLLQKHPTVDLRE 360

Query: 362 RFTSMLRKGQLDRSRGLYKKDPSGHF----HNDEVNETLYSSEEVSDHNMLLEYDSE 415
           RF  +LRKG LDRS+GLYKK          H D++     SSEE S + +  EYDS+
Sbjct: 361 RFARLLRKGLLDRSKGLYKKSKGDGVEVDPHVDDIGNNQSSSEEESVNKLFYEYDSD 417

[Close]
BLAST of Csa6G022360 vs. TrEMBL
Match: F6I4B7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0062g01420 PE=4 SV=1)

HSP 1 Score: 541.2 bits (1393), Expect = 1.1e-150
Identity = 275/423 (65.01%), Postives = 323/423 (76.36%), Query Frame = 1 

Query: 1   MVAWLF-SRLKLSGFLCKNQRGLNLNYLQGRYLVNIRLKWVKDKDLDTVVSAEKDLKAVC 60
           MV WL   R  +SGFL  +QRG    Y Q   LVN++LKWVKD+ LD VV+ E++L+A C
Sbjct: 1   MVWWLLLGRAGVSGFLYVHQRGFI--YQQKFSLVNVKLKWVKDRALDAVVAGERNLRATC 60

Query: 61  FLVSIISSSPEHCLPVYHLRRHRRQLGIPNDVKMSTFIRRYPSIFHESHILDSAGTRVPS 120
            LVSIISS P    P+Y L RHR QLG+P+D+K++TFIRR+P+IF E H+LDS GTRVP 
Sbjct: 61  TLVSIISSDPHDGFPIYRLSRHRGQLGLPHDIKLATFIRRFPNIFDEFHVLDSGGTRVPW 120

Query: 121 FCLTPEARELHAEQIIVLRQCWTDLRSRLCRLLMLTSGCTLPLQTIDQLRWDMGLPYDYQ 180
           F LTPEA  LH E +  L+Q   DL +RL +LLMLT    LPLQTIDQL+WD GLPYDY 
Sbjct: 121 FRLTPEALNLHHEALNALQQNEMDLLNRLRKLLMLTCERMLPLQTIDQLKWDFGLPYDYC 180

Query: 181 NSFIPYNHDMFSFIRLQDHRIGLKLLKWDNDLAVSELQKNAASQQMEEDIRNGYLAFPIG 240
           +S +P   ++FS + L D R+GLKL+ WD+ LAVS+LQKNAA  Q EED+RNG L FPI 
Sbjct: 181 HSLVPSYPELFSMVHLPDDRVGLKLISWDDRLAVSQLQKNAAFNQKEEDVRNGCLTFPIR 240

Query: 241 FTRGFGLNRKCMDWLKEWQTLPYTSPYCDASHLDPRTDVSEKRIVGVFHELLHLTLQKKT 300
           FTRGFGL RKCM WL+EWQ LPYTSPY DASHLDPRTDVSEKRIVGVFHELLHLTLQK+T
Sbjct: 241 FTRGFGLKRKCMKWLEEWQMLPYTSPYTDASHLDPRTDVSEKRIVGVFHELLHLTLQKRT 300

Query: 301 ERKNVSNLRKPFSLPQKFTKVFERHPGIFYISKKDDTQTVILREAYDGDKLVQKHPLVSI 360
           ERKNVSNLRKP S PQKFTKVFERHPGIFYISKK D+QTV+LREAYD  +L+QKHP+V I
Sbjct: 301 ERKNVSNLRKPLSCPQKFTKVFERHPGIFYISKKSDSQTVVLREAYDQQQLLQKHPIVEI 360

Query: 361 RERFTSMLRKGQLDRSRGLYKK--------DPSGHFHNDEVNETLYSSEEVSDHNMLLEY 415
           RERF +M+ KG LDRSRGLYK+        DPS   + DE+N+    SE  SD N+L EY
Sbjct: 361 RERFANMMEKGLLDRSRGLYKRSGINGLEVDPSKDVYYDELNDNERKSESESDRNLLSEY 420

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BLAST of Csa6G022360 vs. TrEMBL
Match: B9T355_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0050420 PE=4 SV=1)

HSP 1 Score: 538.9 bits (1387), Expect = 5.6e-150
Identity = 266/378 (70.37%), Postives = 310/378 (82.01%), Query Frame = 1 

Query: 5   LFSRLKLSGFLCKNQRGLNLNYLQGRYLVNIRLKWVKDKDLDTVVSAEKDLKAVCFLVSI 64
           L SR +   FLC+ +RG N  Y Q   LVN++LKWVKD+ LDT+V+ + DLKA C L SI
Sbjct: 6   LLSREQGFQFLCRCRRGFN--YQQTFSLVNVKLKWVKDRALDTLVAGQTDLKATCLLTSI 65

Query: 65  ISSSPEHCLPVYHLRRHRRQLGIPNDVKMSTFIRRYPSIFHESHILDSAGTRVPSFCLTP 124
           ISS+P  CLP+YHL  HRRQL +P+D+K+STFIRRYP+IF ESHILDS GTRVP F LTP
Sbjct: 66  ISSAPLCCLPIYHLTPHRRQLCLPHDLKLSTFIRRYPTIFQESHILDSGGTRVPCFQLTP 125

Query: 125 EARELHAEQIIVLRQCWTDLRSRLCRLLMLTSGCTLPLQTIDQLRWDMGLPYDYQNSFIP 184
           EA  +H E+  +L+Q   DL  RLC+LLMLT    LPLQTIDQL+WD+GLPYDY N+ IP
Sbjct: 126 EASNIHKEEFQILQQNQMDLIQRLCKLLMLTKDRILPLQTIDQLKWDLGLPYDYCNTLIP 185

Query: 185 YNHDMFSFIRLQDHRIGLKLLKWDNDLAVSELQKNAASQQMEEDIRNGYLAFPIGFTRGF 244
            + D+FS +RL D RIGLKL  WD+ LAVS+LQKNAA QQ EED+++G LAFPI FTRGF
Sbjct: 186 NHPDLFSSVRLPDDRIGLKLQMWDDTLAVSQLQKNAAFQQKEEDVKSGCLAFPIRFTRGF 245

Query: 245 GLNRKCMDWLKEWQTLPYTSPYCDASHLDPRTDVSEKRIVGVFHELLHLTLQKKTERKNV 304
           GL RKCM+WL+EWQ+LPYTSPY DASHLDPRTDVSEKRIVGVFHELLHLT+QKKTERKNV
Sbjct: 246 GLKRKCMEWLEEWQSLPYTSPYSDASHLDPRTDVSEKRIVGVFHELLHLTIQKKTERKNV 305

Query: 305 SNLRKPFSLPQKFTKVFERHPGIFYISKKDDTQTVILREAYDGDKLVQKHPLVSIRERFT 364
           SNLRK  SLPQKFTKVFERHP IFYIS K DTQTV+LREAYDG +L+QKHPLV IRER+ 
Sbjct: 306 SNLRKSLSLPQKFTKVFERHPAIFYISMKCDTQTVVLREAYDGQQLLQKHPLVDIRERYA 365

Query: 365 SMLRKGQLDRSRGLYKKD 383
           S++ +G LDRSRGLYKK+
Sbjct: 366 SLMSRGLLDRSRGLYKKN 381

[Close]
BLAST of Csa6G022360 vs. TrEMBL
Match: W9QX20_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_009881 PE=4 SV=1)

HSP 1 Score: 534.6 bits (1376), Expect = 1.1e-148
Identity = 276/432 (63.89%), Postives = 328/432 (75.93%), Query Frame = 1 

Query: 1   MVAW-LFSRLKLSGFLCKNQRGLNLNYLQGRYLVNIRLKWVKDKDLDTVVSAEKDLKAVC 60
           M  W LF +++ SGFLCK+Q G +  Y Q   LVN++LKWVKDK LD  V  EKDLKA C
Sbjct: 1   MARWFLFGKVESSGFLCKSQSGFS--YQQKCSLVNVKLKWVKDKALDAAVIVEKDLKAAC 60

Query: 61  FLVSIISSSPEHCLPVYHLRRHRRQLGIPNDVKMSTFIRRYPSIFHESHILDSAGTRVPS 120
            L +IISS+P+  LP+YHL  HR QLG+P D+K+STFIRRYPS+F ESH LD+ GTRVP 
Sbjct: 61  TLATIISSTPQRRLPIYHLSCHRGQLGLPKDLKLSTFIRRYPSVFLESHFLDTGGTRVPC 120

Query: 121 FCLTPEARELHAEQIIVLRQCWTDLRSRLCRLLMLTSGCTLPLQTIDQLRWDMGLPYDYQ 180
           F LT EA ELH E++ ++ Q   DL +RL +LLMLT   TLPLQTIDQL+WD GLPYDYQ
Sbjct: 121 FGLTHEAVELHEEELHLVEQNEMDLLNRLRKLLMLTRDWTLPLQTIDQLKWDFGLPYDYQ 180

Query: 181 NSFIPYNHDMFSFIRLQDHRIGLKLLKWDNDLAVSELQKNAASQQMEEDIRNGYLAFPIG 240
           +SFIP + D+ SF++L D R+GLKL  WD+D AVSEL KN+ASQ  ++D +N  LAFPIG
Sbjct: 181 HSFIPRHPDLLSFVQLPDKRVGLKLNIWDDDHAVSELLKNSASQPKQQDTKNDCLAFPIG 240

Query: 241 FTRGFGLNRKCMDWLKEWQTLPYTSPYCDASHLDPRTDVSEKRIVGVFHELLHLTLQKKT 300
           FTRGFGL RKCM+WLKEWQ LPYTSPY +AS+LDPRTDVSEKRIVGVFHELLHLT+QKKT
Sbjct: 241 FTRGFGLKRKCMEWLKEWQRLPYTSPYSEASYLDPRTDVSEKRIVGVFHELLHLTIQKKT 300

Query: 301 ERKNVSNLRKPFSLPQKFTKVFERHPGIFYISKKDDTQTVILREAYDGDKLVQKHPLVSI 360
           ERKNVSNLRKP +LPQKFTKVFERHPGIFYISKK DTQTVILREAYDG  L+Q+H L  I
Sbjct: 301 ERKNVSNLRKPLALPQKFTKVFERHPGIFYISKKCDTQTVILREAYDGQNLLQRHSLSEI 360

Query: 361 RERFTSMLRKGQLDRSRGLYKK--------DPSGHFHNDEVNETLYSSEEVSDHNMLLEY 420
           RE+F  MLR+G LD+S+GLYKK        DP  +  + EV+ +  SSEE        EY
Sbjct: 361 REKFARMLREGLLDKSKGLYKKTRRDDMVEDPLKYECHFEVDSSESSSEEE------FEY 420

Query: 421 DSESDGLIDNNC 424
            +     ++N C
Sbjct: 421 ANYFSTALNNGC 424

[Close]
BLAST of Csa6G022360 vs. TAIR10
Match: AT5G48040.1 (AT5G48040.1 Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 458.0 bits (1177), Expect = 6.4e-129
Identity = 240/417 (57.55%), Postives = 298/417 (71.46%), Query Frame = 1 

Query: 4   WLFSR-LKLSGFLCKNQRGLNLNYLQGRYLVNIRLKWVKDKDLDTVVSAEKDLKAVCFLV 63
           WL  R + LS  LCK +   +  Y Q   LVN++LKWVKD++LD VV  EK L+AVC LV
Sbjct: 3   WLLQRRVSLSTSLCKCRERFDFFYQQRCGLVNVKLKWVKDRELDAVVVREKHLRAVCNLV 62

Query: 64  SIISSSPEHCLPVYHLRRHRRQLGIPNDVKMSTFIRRYPSIFHESHILDSAGTRVPSFCL 123
           S+IS+SP+  LP++ L  HR QLG+P ++K+S FIRRYP+IF E    DSAGT VP F L
Sbjct: 63  SVISASPDLRLPIFKLLPHRGQLGLPQELKLSAFIRRYPNIFVEHCYWDSAGTSVPCFGL 122

Query: 124 TPEARELHAEQIIVLRQCWTDLRSRLCRLLMLTSGCTLPLQTIDQLRWDMGLPYDYQNSF 183
           T E  +L+ E++ V R    D+  RLC+LLMLT   TL L +ID LRWD+GLPYDY++S 
Sbjct: 123 TRETIDLYYEEVDVSRVNERDVLVRLCKLLMLTCERTLSLHSIDHLRWDLGLPYDYRDSL 182

Query: 184 IPYNHDMFSFIRLQDHRIGLKLLKWDNDLAVSELQKNAASQQMEEDIRNGY-LAFPIGFT 243
           I  + D+FS ++L     GLKL+ WD  LAVS++Q       + ED+ N   +AFP+ FT
Sbjct: 183 ITKHPDLFSLVKLSSDLDGLKLIHWDEHLAVSQMQ-------LREDVGNDERMAFPVKFT 242

Query: 244 RGFGLNRKCMDWLKEWQTLPYTSPYCDASHLDPRTDVSEKRIVGVFHELLHLTLQKKTER 303
           RGFGL RK ++WL+EWQ LPYTSPY DASHLDPRTD+SEKR VGVFHELLHLT+ KKTER
Sbjct: 243 RGFGLKRKSIEWLQEWQRLPYTSPYVDASHLDPRTDLSEKRNVGVFHELLHLTIGKKTER 302

Query: 304 KNVSNLRKPFSLPQKFTKVFERHPGIFYISKKDDTQTVILREAYDGDKLVQKHPLVSIRE 363
           KNVSNLRKPF+LPQKFTKVFERHPGIFYIS K DTQTVILREAYD   L++KHPLV +RE
Sbjct: 303 KNVSNLRKPFALPQKFTKVFERHPGIFYISMKCDTQTVILREAYDRRHLIEKHPLVEVRE 362

Query: 364 RFTSMLRKGQLDRSRGLYKKDPSGHFHNDEVNETLY----SSEEVSDHNMLLEYDSE 415
           +F +M+ +G LDRSRGLY+K        + + +T Y      EE  D+N++  YDS+
Sbjct: 363 KFANMMNEGFLDRSRGLYQKSVEADLEKNNI-KTSYPVWSDEEEELDNNLISGYDSD 411

[Close]
BLAST of Csa6G022360 vs. TAIR10
Match: AT3G58520.1 (AT3G58520.1 Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 263.5 bits (672), Expect = 2.3e-70
Identity = 152/396 (38.38%), Postives = 228/396 (57.58%), Query Frame = 1 

Query: 32  LVNIRLKWVKDKDLDTVVSAEKDLKAVCFLVSIISSSPEHCLPVYHLRRHRRQLGIPNDV 91
           +  +RLKWVK+K+LD V+  E DLKA C L   I  SP   L    +   ++ LG+   V
Sbjct: 28  MTKVRLKWVKNKNLDHVIDTETDLKAACILKDAIKRSPTGFLTAKSVADWQKLLGLT--V 87

Query: 92  KMSTFIRRYPSIFHESHILDSAGTRVPSFCLTPEARELHAEQIIVLRQCWTDLRSRLCRL 151
            +  F+RRYP++FHE      A   +P F LT  A  L +++ I+ +    D   RLCR+
Sbjct: 88  PVLRFLRRYPTLFHEFPHARYAS--LPCFKLTDTALMLDSQEEIIHQSHEADTVERLCRV 147

Query: 152 LMLTSGCTLPLQTIDQLRWDMGLPYDYQNSFIPYNHDMFSFIRLQDHRIGLKLLKWDNDL 211
           LM+    T+ L+++  L++D+GLP +Y+ + +    D F F++  +    LKL+KW ++ 
Sbjct: 148 LMMMRSKTVSLRSLHSLKFDLGLPDNYEKTLVMKYPDHFCFVKASNGNPCLKLVKWRDEF 207

Query: 212 AVSELQKN------AASQQMEEDIRNGY--LAFPIGFTRGFGLNRKCMDWLKEWQTLPYT 271
           A S LQK       +  +    + + G   L FP+ F RG+G  +K   W+ E+Q LPY 
Sbjct: 208 AFSALQKRNEDNDVSGEESRYREFKRGQSTLTFPMSFPRGYGAQKKVKAWMDEFQKLPYI 267

Query: 272 SPYCDASHLDPRTDVSEKRIVGVFHELLHLTLQKKTERKNVSNLRKPFSLPQKFTKVFER 331
           SPY D S++DP +D+ EKR V V HELL LT+ KKT+R  + ++R   ++P KFT++F R
Sbjct: 268 SPYDDPSNIDPESDLMEKRAVAVLHELLSLTIHKKTKRNYLRSMRAELNIPHKFTRLFTR 327

Query: 332 HPGIFYISKKDDTQTVILREAYDGDKLVQKHPLVSIRERFTSMLRKGQLDRSRGL---YK 391
           +PGIFY+S K  T TVIL+E Y   KLV  HPL  +R++F  ++R G L R+RGL    K
Sbjct: 328 YPGIFYLSLKCKTTTVILKEGYRRGKLVDPHPLTRLRDKFYHVMRTGFLYRARGLGMVSK 387

Query: 392 KDPSGHFHNDEVNETLYSSEEVSDHNMLLEYDSESD 417
           ++       D++ E     EE+ + +  LE DSE++
Sbjct: 388 EELLLDRPEDDLEEEGSEEEEIVEGSE-LEEDSEAE 418

[Close]
BLAST of Csa6G022360 vs. TAIR10
Match: AT2G39120.1 (AT2G39120.1 Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 225.7 bits (574), Expect = 5.3e-59
Identity = 132/351 (37.61%), Postives = 196/351 (55.84%), Query Frame = 1 

Query: 25  NYLQGRYLVNIRLKWVKDKDLDTV--VSAEKDLKAVCFLVSIISSSPEHCLPVYHLRRHR 84
           N  Q R  V++ +KW +D   D +  +     LK+V  L + I   P  C+P+  + +  
Sbjct: 17  NLTQKRTYVDVYMKWKRDPYFDNIEHILRSSQLKSVVSLKNCIVQEPNRCIPISAISKKT 76

Query: 85  RQLGIPNDVKMSTFIRRYPSIFHESHILDSAGTRVPSFCLTPEARELHAEQIIVLRQCWT 144
           RQ  +    K++ F+R++PSIF E          +P F LTPEA EL  ++ +V +    
Sbjct: 77  RQFDV--STKIAHFLRKFPSIFEE---FVGPEYNLPWFRLTPEATELDRQERVVYQTSAD 136

Query: 145 DLRSRLCRLLMLTSGCTLPLQTIDQLRWDMGLPYDYQNSFIPYNHDM-FSFIRLQDHRIG 204
           DLR RL +L++++    LPL  +  ++W +GLP DY   F   N D  F F+ ++D   G
Sbjct: 137 DLRDRLKKLILMSKDNVLPLSIVQGMKWYLGLPDDYLQ-FPDMNLDSSFRFVDMEDGVKG 196

Query: 205 LKLLKWDNDLAVSELQKNAASQQMEEDIRNGYLAFPIGFTRGFGLNRKCMDWLKEWQTLP 264
           L +     D  +S LQKNA  ++  E +    + FP+  ++G  L  K  DWL E+Q LP
Sbjct: 197 LAVDYNGGDKVLSVLQKNAMKKRRGE-VSLEEIEFPLFPSKGCRLRVKIEDWLMEFQKLP 256

Query: 265 YTSPYCDASHLDPRTDVSEKRIVGVFHELLHLTLQKKTERKNVSNLRKPFSLPQKFTKVF 324
           Y SPY D S LDP +D++EKR+VG  HELL L ++   ERK +  L+K F LPQK  K F
Sbjct: 257 YVSPYDDYSCLDPSSDIAEKRVVGFLHELLCLFVEHSAERKKLLCLKKHFGLPQKVHKAF 316

Query: 325 ERHPGIFYISKKDDTQTVILREAYDGDKLVQKHPLVSIRERFTSMLRKGQL 373
           ERHP IFY+S K+ T T ILRE Y     V+ HP++ +R+++  +++  +L
Sbjct: 317 ERHPQIFYLSMKNKTCTAILREPYRDKASVETHPVLGVRKKYIQLMKNSEL 360

[Close]
BLAST of Csa6G022360 vs. TAIR10
Match: AT1G71850.1 (AT1G71850.1 Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 204.9 bits (520), Expect = 9.7e-53
Identity = 128/398 (32.16%), Postives = 203/398 (51.01%), Query Frame = 1 

Query: 38  KWVKDKDLDTVVSAEKDLKAVCFLVSIISSSPEHCLPVYHLRRHRRQLGIPNDVKMSTFI 97
           K+V+D+ LD  V  EK+L+ +  +  +I S P   +P+  +   +  L +P  ++   FI
Sbjct: 30  KFVRDRGLDHAVEREKNLRPLLSIKDLIRSEPAKSVPISVITSQKDSLRVP--LRPIEFI 89

Query: 98  RRYPSIFHESHILDSAGTRVPSFCLTPEARELHA-EQIIVLRQCWTD-LRSRLCRLLMLT 157
           R +PS+F E   L       P   LTPE     A EQ++   + +   L  RL +LLM+ 
Sbjct: 90  RSFPSVFQE--FLPGGIGIHPHISLTPEILNHDADEQLVYGSETYKQGLADRLLKLLMIN 149

Query: 158 SGCTLPLQTIDQLRWDMGLPYDYQNSFIPYNHDMFSFIR--LQDHRIGLKLLKWDNDLAV 217
               +PL+ +D L+WD+GLP DY  + +P   D F  I+  L+     L+L+ W N+ AV
Sbjct: 150 RINKIPLEILDLLKWDLGLPKDYVETMVPEFPDYFRVIKSKLRGCSGELELVCWSNEHAV 209

Query: 218 SELQKNAASQQMEEDIRNGYLAFPIGFTRGFGLNRKCMDWLKEWQTLPYTSPYCDASHLD 277
           S L+K A + +  E  +   +AFP+ F+ GF +++K   W+ +WQ LPY SPY +A HL 
Sbjct: 210 SVLEKKARTLRKGEYTKGSAIAFPMKFSNGFVVDKKMKKWIDDWQKLPYISPYENALHLS 269

Query: 278 PRTDVSEKRIVGVFHELLHLTLQKKTERKNVSNLRKPFSLPQKFTKVFERHPGIFYISKK 337
             +D S+K    V HE+++L + KK E+  + +L +   L  +F +V   HPGIFY+S K
Sbjct: 270 ATSDESDKWAAAVLHEIMNLFVSKKVEKDAILHLGEFMGLRSRFKRVLHNHPGIFYLSSK 329

Query: 338 DDTQTVILREAYDGDKLVQKHPLVSIRERFTSMLRKGQLDRS--RGLYKKDPSGHFHND- 397
             T TV+LR+ Y    L++ + LV+ R R+  ++   + D        KK+  G    + 
Sbjct: 330 LRTHTVVLRDGYKRGMLIESNELVTSRNRYMKLMNTVKKDNKAVSSSSKKEDKGKVEGEV 389

Query: 398 ------EVNETLYSSEEVSDHNMLLEYDSESDGLIDNN 423
                   N+ +  S+   D       D E D  +D N
Sbjct: 390 CDTDAKAENDDISGSDVEDDRQGDFVDDDEDDDEVDQN 423

[Close]
BLAST of Csa6G022360 vs. TAIR10
Match: AT4G24320.1 (AT4G24320.1 Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 204.5 bits (519), Expect = 1.3e-52
Identity = 131/356 (36.80%), Postives = 187/356 (52.53%), Query Frame = 1 

Query: 28  QGRYLVNIRLKWVKDKDLDTVVSAEKDLKAVCFLVSIISSSPEHCLPVYHLRRHRRQLGI 87
           Q R  VN R+KWV D  LD  V  EK+LK V  L   I SSP   LP+  L   +  + +
Sbjct: 14  QRRTFVNARVKWVSDHYLDEAVQREKNLKQVISLKDRIVSSPSKSLPLSSLSLLKPLVNL 73

Query: 88  PNDVKMSTFIRRYPSIFHESHILDSAGTRVPSFCLTPEARELHAEQ-IIVLRQCWTDLR- 147
              +  + F ++YPS+F       S    V    LTP+A  LH E+  I L     ++  
Sbjct: 74  --HITAAAFFQKYPSVFTTFQPSPSHPLHVR---LTPQALTLHKEEETIHLSPPQRNVTV 133

Query: 148 SRLCRLLMLTSGCTLPLQTIDQLRWDMGLPYDYQNSFIPYNHDMFSFIRLQDHRIGLKLL 207
            RL + LMLT   +LPL  +D+ R+D+GLP DY  S I    + F    ++D   G K L
Sbjct: 134 QRLTKFLMLTGAGSLPLYVLDRFRFDLGLPRDYITSLIGDYPEYFEVTEIKDRLTGEKTL 193

Query: 208 KWD-----NDLAVSELQKNAASQQMEEDIRNGYLAFPIGFTRGFGLNRKCMDWLKEWQTL 267
                   N+L VSE+++  A+       +   + + + F +G+ L+++  +W+++WQ L
Sbjct: 194 ALTISSRRNNLPVSEMERREATIDGSRVKKGLRIRYSMNFPKGYELHKRVKNWVEQWQNL 253

Query: 268 PYTSPYCDASHLDPRTDVSEKRIVGVFHELLHLTLQKKTERKNVSNLRKPFSLPQKFTKV 327
           PY SPY +A HL   +D +EK  V V HELL L + KKTE  NV  L +      +F K 
Sbjct: 254 PYISPYENAFHLGSYSDQAEKWAVAVLHELLFLLVSKKTETDNVICLGEYLGFGMRFKKA 313

Query: 328 FERHPGIFYISKKDDTQTVILREAYDGDKLVQKHPLVSIRERFTSMLRKGQLDRSR 377
              HPGIFY+S K  TQTV+LREAY    L++KHPL+ IR ++  ++ K    + R
Sbjct: 314 LVHHPGIFYMSHKIRTQTVVLREAYHKVFLLEKHPLMGIRHQYIYLMSKSGRGKKR 364

[Close]
BLAST of Csa6G022360 vs. NCBI nr
Match: gi|449441530|ref|XP_004138535.1| (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis sativus])

HSP 1 Score: 872.8 bits (2254), Expect = 2.4e-250
Identity = 423/423 (100.00%), Postives = 423/423 (100.00%), Query Frame = 1 

Query: 1   MVAWLFSRLKLSGFLCKNQRGLNLNYLQGRYLVNIRLKWVKDKDLDTVVSAEKDLKAVCF 60
           MVAWLFSRLKLSGFLCKNQRGLNLNYLQGRYLVNIRLKWVKDKDLDTVVSAEKDLKAVCF
Sbjct: 1   MVAWLFSRLKLSGFLCKNQRGLNLNYLQGRYLVNIRLKWVKDKDLDTVVSAEKDLKAVCF 60

Query: 61  LVSIISSSPEHCLPVYHLRRHRRQLGIPNDVKMSTFIRRYPSIFHESHILDSAGTRVPSF 120
           LVSIISSSPEHCLPVYHLRRHRRQLGIPNDVKMSTFIRRYPSIFHESHILDSAGTRVPSF
Sbjct: 61  LVSIISSSPEHCLPVYHLRRHRRQLGIPNDVKMSTFIRRYPSIFHESHILDSAGTRVPSF 120

Query: 121 CLTPEARELHAEQIIVLRQCWTDLRSRLCRLLMLTSGCTLPLQTIDQLRWDMGLPYDYQN 180
           CLTPEARELHAEQIIVLRQCWTDLRSRLCRLLMLTSGCTLPLQTIDQLRWDMGLPYDYQN
Sbjct: 121 CLTPEARELHAEQIIVLRQCWTDLRSRLCRLLMLTSGCTLPLQTIDQLRWDMGLPYDYQN 180

Query: 181 SFIPYNHDMFSFIRLQDHRIGLKLLKWDNDLAVSELQKNAASQQMEEDIRNGYLAFPIGF 240
           SFIPYNHDMFSFIRLQDHRIGLKLLKWDNDLAVSELQKNAASQQMEEDIRNGYLAFPIGF
Sbjct: 181 SFIPYNHDMFSFIRLQDHRIGLKLLKWDNDLAVSELQKNAASQQMEEDIRNGYLAFPIGF 240

Query: 241 TRGFGLNRKCMDWLKEWQTLPYTSPYCDASHLDPRTDVSEKRIVGVFHELLHLTLQKKTE 300
           TRGFGLNRKCMDWLKEWQTLPYTSPYCDASHLDPRTDVSEKRIVGVFHELLHLTLQKKTE
Sbjct: 241 TRGFGLNRKCMDWLKEWQTLPYTSPYCDASHLDPRTDVSEKRIVGVFHELLHLTLQKKTE 300

Query: 301 RKNVSNLRKPFSLPQKFTKVFERHPGIFYISKKDDTQTVILREAYDGDKLVQKHPLVSIR 360
           RKNVSNLRKPFSLPQKFTKVFERHPGIFYISKKDDTQTVILREAYDGDKLVQKHPLVSIR
Sbjct: 301 RKNVSNLRKPFSLPQKFTKVFERHPGIFYISKKDDTQTVILREAYDGDKLVQKHPLVSIR 360

Query: 361 ERFTSMLRKGQLDRSRGLYKKDPSGHFHNDEVNETLYSSEEVSDHNMLLEYDSESDGLID 420
           ERFTSMLRKGQLDRSRGLYKKDPSGHFHNDEVNETLYSSEEVSDHNMLLEYDSESDGLID
Sbjct: 361 ERFTSMLRKGQLDRSRGLYKKDPSGHFHNDEVNETLYSSEEVSDHNMLLEYDSESDGLID 420

Query: 421 NNC 424
           NNC
Sbjct: 421 NNC 423

[Close]
BLAST of Csa6G022360 vs. NCBI nr
Match: gi|659089626|ref|XP_008445613.1| (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo])

HSP 1 Score: 826.6 bits (2134), Expect = 1.9e-236
Identity = 400/423 (94.56%), Postives = 411/423 (97.16%), Query Frame = 1 

Query: 1   MVAWLFSRLKLSGFLCKNQRGLNLNYLQGRYLVNIRLKWVKDKDLDTVVSAEKDLKAVCF 60
           MVAWLFSRLKL GF CKNQ GL+LNYLQGR LVNI+LKWVKDKDLDTVVSAEKDLKAVCF
Sbjct: 1   MVAWLFSRLKLFGFSCKNQTGLSLNYLQGRCLVNIKLKWVKDKDLDTVVSAEKDLKAVCF 60

Query: 61  LVSIISSSPEHCLPVYHLRRHRRQLGIPNDVKMSTFIRRYPSIFHESHILDSAGTRVPSF 120
           LVSIISSSPE+CLPVYHLR HRRQLG+PNDVKMSTFIRRYPSIFHESHILDSAGTRVPSF
Sbjct: 61  LVSIISSSPENCLPVYHLRCHRRQLGLPNDVKMSTFIRRYPSIFHESHILDSAGTRVPSF 120

Query: 121 CLTPEARELHAEQIIVLRQCWTDLRSRLCRLLMLTSGCTLPLQTIDQLRWDMGLPYDYQN 180
           CLTPEARELH EQI+VLRQCWTDLRSRLCRLLMLTSGCTLPLQTIDQLRWDMGLPYDYQN
Sbjct: 121 CLTPEARELHEEQIVVLRQCWTDLRSRLCRLLMLTSGCTLPLQTIDQLRWDMGLPYDYQN 180

Query: 181 SFIPYNHDMFSFIRLQDHRIGLKLLKWDNDLAVSELQKNAASQQMEEDIRNGYLAFPIGF 240
           SF+PYNHD+FSFIRLQD RIGLKLL WDNDLAVSELQKNAASQQMEEDIRNGYLAFPIGF
Sbjct: 181 SFVPYNHDLFSFIRLQDDRIGLKLLLWDNDLAVSELQKNAASQQMEEDIRNGYLAFPIGF 240

Query: 241 TRGFGLNRKCMDWLKEWQTLPYTSPYCDASHLDPRTDVSEKRIVGVFHELLHLTLQKKTE 300
           TRGFGLNRKCMDWLK+WQ LPYTSPYCDASHLDPRTDVSEKRIVGVFHELLHLTLQKKTE
Sbjct: 241 TRGFGLNRKCMDWLKDWQKLPYTSPYCDASHLDPRTDVSEKRIVGVFHELLHLTLQKKTE 300

Query: 301 RKNVSNLRKPFSLPQKFTKVFERHPGIFYISKKDDTQTVILREAYDGDKLVQKHPLVSIR 360
           RKNVSNLRKPFSLPQKFTKVFERHPGIFYISKKDDTQTVILREAYDGDKL+QKHPLVSIR
Sbjct: 301 RKNVSNLRKPFSLPQKFTKVFERHPGIFYISKKDDTQTVILREAYDGDKLLQKHPLVSIR 360

Query: 361 ERFTSMLRKGQLDRSRGLYKKDPSGHFHNDEVNETLYSSEEVSDHNMLLEYDSESDGLID 420
           ERFTSMLRKGQLDRSRGLYKKDPSGH ++DEVNET YSSEEVSDHNML EYDSESDGLID
Sbjct: 361 ERFTSMLRKGQLDRSRGLYKKDPSGHVYHDEVNETRYSSEEVSDHNMLSEYDSESDGLID 420

Query: 421 NNC 424
           NNC
Sbjct: 421 NNC 423

[Close]
BLAST of Csa6G022360 vs. NCBI nr
Match: gi|1009172691|ref|XP_015867411.1| (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1-like [Ziziphus jujuba])

HSP 1 Score: 555.1 bits (1429), Expect = 1.1e-154
Identity = 278/403 (68.98%), Postives = 328/403 (81.39%), Query Frame = 1 

Query: 1   MVAWL-FSRLKLSGFLCKNQRGLNLNYLQGRYLVNIRLKWVKDKDLDTVVSAEKDLKAVC 60
           MV WL FSR+  + FL  N   L   Y Q   LVNI+LKWVKDK LD VV+ ++DLKA C
Sbjct: 1   MVNWLLFSRIGGNSFL--NGCQLGFRYQQKCRLVNIKLKWVKDKALDAVVNDDRDLKAAC 60

Query: 61  FLVSIISSSPEHCLPVYHLRRHRRQLGIPNDVKMSTFIRRYPSIFHESHILDSAGTRVPS 120
            LV+IISS+P+ CLP++ L RHR QLG+P D+K+STFIRRYPS+F ESHILD+ GT VP 
Sbjct: 61  ILVTIISSTPQCCLPIHSLSRHRGQLGLPCDLKLSTFIRRYPSVFIESHILDTGGTPVPC 120

Query: 121 FCLTPEARELHAEQIIVLRQCWTDLRSRLCRLLMLTSGCTLPLQTIDQLRWDMGLPYDYQ 180
           F LT EA +LH E++ +L+   TDL  RL +LLMLT   TLPLQTIDQL+WD+GLPYDY 
Sbjct: 121 FSLTCEALKLHQEELHILKHTQTDLLDRLRKLLMLTRNWTLPLQTIDQLKWDLGLPYDYH 180

Query: 181 NSFIPYNHDMFSFIRLQDHRIGLKLLKWDNDLAVSELQKNAASQQMEEDIRNGYLAFPIG 240
           +S IP+++D+FSF+RL D R+GLKL  WD+ LAVS+L+K+ ASQQ E+D +NG LAFPIG
Sbjct: 181 DSLIPHHNDLFSFVRLPDERVGLKLRNWDDGLAVSQLEKSYASQQKEDDQQNGCLAFPIG 240

Query: 241 FTRGFGLNRKCMDWLKEWQTLPYTSPYCDASHLDPRTDVSEKRIVGVFHELLHLTLQKKT 300
           FTRGFGL RKCMDWL+EWQTLPYTSPY DASHLDPRTDVSEKRIVGVFHELLHLT+QKKT
Sbjct: 241 FTRGFGLKRKCMDWLREWQTLPYTSPYLDASHLDPRTDVSEKRIVGVFHELLHLTIQKKT 300

Query: 301 ERKNVSNLRKPFSLPQKFTKVFERHPGIFYISKKDDTQTVILREAYDGDKLVQKHPLVSI 360
           ERKNVSNLRKP +LPQKFTKVFERHPGIFYISKK DTQTVILREAY+G +L+QKHPL+ I
Sbjct: 301 ERKNVSNLRKPLALPQKFTKVFERHPGIFYISKKCDTQTVILREAYEGQQLLQKHPLLEI 360

Query: 361 RERFTSMLRKGQLDRSRGLYKK--------DPSGHFHNDEVNE 395
           RERF +MLR+GQLDRSRGLYKK        DPS H ++ E+ +
Sbjct: 361 RERFATMLREGQLDRSRGLYKKTTGVNLEGDPSRHVYHIEIGD 401

[Close]
BLAST of Csa6G022360 vs. NCBI nr
Match: gi|1009180117|ref|XP_015871453.1| (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1-like [Ziziphus jujuba])

HSP 1 Score: 553.9 bits (1426), Expect = 2.4e-154
Identity = 277/398 (69.60%), Postives = 326/398 (81.91%), Query Frame = 1 

Query: 1   MVAWL-FSRLKLSGFLCKNQRGLNLNYLQGRYLVNIRLKWVKDKDLDTVVSAEKDLKAVC 60
           MV WL FSR+  + FL  N   L   Y Q   LVNI+LKWVKDK LD VV+ ++DLKA C
Sbjct: 1   MVNWLLFSRIGGNSFL--NGCQLGFRYHQKCSLVNIKLKWVKDKALDAVVNDDRDLKAAC 60

Query: 61  FLVSIISSSPEHCLPVYHLRRHRRQLGIPNDVKMSTFIRRYPSIFHESHILDSAGTRVPS 120
            LV+IISS+P+ CLP++ L RHR QLG+P D+K+STFIRRYPS+F ESHILD+ GTRVP 
Sbjct: 61  ILVTIISSTPQCCLPIHSLSRHRGQLGLPCDLKLSTFIRRYPSVFIESHILDTEGTRVPC 120

Query: 121 FCLTPEARELHAEQIIVLRQCWTDLRSRLCRLLMLTSGCTLPLQTIDQLRWDMGLPYDYQ 180
           F LT EA +LH E++ +L+   TDL  RL +LLMLT   TLPLQTIDQL+WD+GLPYDY 
Sbjct: 121 FSLTCEALKLHQEELHILKHTQTDLLDRLRKLLMLTRNWTLPLQTIDQLKWDLGLPYDYH 180

Query: 181 NSFIPYNHDMFSFIRLQDHRIGLKLLKWDNDLAVSELQKNAASQQMEEDIRNGYLAFPIG 240
           +S IP+++D+FSF+RL D R+GLKL  WD+ LAVS+L+K+ ASQQ E+D +NG LAFPIG
Sbjct: 181 DSLIPHHNDLFSFVRLPDERVGLKLRNWDDGLAVSQLEKSYASQQKEDDQQNGCLAFPIG 240

Query: 241 FTRGFGLNRKCMDWLKEWQTLPYTSPYCDASHLDPRTDVSEKRIVGVFHELLHLTLQKKT 300
           FTRGFGL RKCMDWL+EWQTLPYTSPY DASHLDPRTD+SEKRIVGVFHELLHLT+QKKT
Sbjct: 241 FTRGFGLKRKCMDWLREWQTLPYTSPYLDASHLDPRTDISEKRIVGVFHELLHLTIQKKT 300

Query: 301 ERKNVSNLRKPFSLPQKFTKVFERHPGIFYISKKDDTQTVILREAYDGDKLVQKHPLVSI 360
           ERKNVSNLRKP +LPQKFTKVFERHPGIFYISKK DTQTVILREAY+G +L+QKHPL+ I
Sbjct: 301 ERKNVSNLRKPLALPQKFTKVFERHPGIFYISKKCDTQTVILREAYEGQQLLQKHPLLEI 360

Query: 361 RERFTSMLRKGQLDRSRGLYKK--------DPSGHFHN 390
           RERF +MLR+GQLDRSRGLYKK        DPS H ++
Sbjct: 361 RERFATMLREGQLDRSRGLYKKTTGVNLEGDPSRHVYH 396

[Close]
BLAST of Csa6G022360 vs. NCBI nr
Match: gi|645231844|ref|XP_008222589.1| (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Prunus mume])

HSP 1 Score: 547.4 bits (1409), Expect = 2.3e-152
Identity = 275/415 (66.27%), Postives = 326/415 (78.55%), Query Frame = 1 

Query: 4   WLFSRLKLSGFLCKNQRGLNLNYLQGRYLVNIRLKWVKDKDLDTVVSAEKDLKAVCFLVS 63
           +LF ++   GF    Q G N  + +G  LVN++LKWVKD+ LD VV+A +DLKA C LVS
Sbjct: 5   FLFVKVGGFGFFRGCQHGFNYQHKRG--LVNVKLKWVKDRGLDAVVTAARDLKAACILVS 64

Query: 64  IISSSPEHCLPVYHLRRHRRQLGIPNDVKMSTFIRRYPSIFHESHILDSAGTRVPSFCLT 123
           IISSSP+ CLP+Y L  HR QL +P D+K+STFIR++PS+F ESH   S G RVP F LT
Sbjct: 65  IISSSPQCCLPIYRLSCHRGQLSLPCDLKLSTFIRKFPSVFVESHTFWSGGARVPCFSLT 124

Query: 124 PEARELHAEQIIVLRQCWTDLRSRLCRLLMLTSGCTLPLQTIDQLRWDMGLPYDYQNSFI 183
           PEA +L+ E++ VL+Q   DL +RL +LLMLT G TLPLQT+DQL+WD+GLPYDYQ+S I
Sbjct: 125 PEALQLYHEELNVLQQNQVDLINRLQKLLMLTQGWTLPLQTLDQLKWDLGLPYDYQHSVI 184

Query: 184 PYNHDMFSFIRLQDHRIGLKLLKWDNDLAVSELQKNAASQQMEEDIRNGYLAFPIGFTRG 243
           P++ D+FSFIRL D R+GLKLL WD DLAVS+LQKN+A QQ EED R+G LAFP+GFTRG
Sbjct: 185 PHHPDLFSFIRLPDDRVGLKLLSWDEDLAVSQLQKNSAIQQKEEDARSGCLAFPVGFTRG 244

Query: 244 FGLNRKCMDWLKEWQTLPYTSPYCDASHLDPRTDVSEKRIVGVFHELLHLTLQKKTERKN 303
           FGL RKCM+WLKEWQTLPYTSPY DASHLDPRTDVSEKRIVGVFHELL LT+ KKTERKN
Sbjct: 245 FGLKRKCMEWLKEWQTLPYTSPYSDASHLDPRTDVSEKRIVGVFHELLQLTIHKKTERKN 304

Query: 304 VSNLRKPFSLPQKFTKVFERHPGIFYISKKDDTQTVILREAYDGDKLVQKHPLVSIRERF 363
           VSNLRKP +LPQKFTKVFERHPGIFYISKK  TQTVILREAY+  +L+QKHP V +RERF
Sbjct: 305 VSNLRKPLALPQKFTKVFERHPGIFYISKKCATQTVILREAYNHQQLLQKHPTVDLRERF 364

Query: 364 TSMLRKGQLDRSRGLYKKDPSGHF----HNDEVNETLYSSEEVSDHNMLLEYDSE 415
             +LRKG LDRS+GLYKK          H D++     SSEE S +N+  EYDS+
Sbjct: 365 ARLLRKGLLDRSKGLYKKSKGDGVEVDPHVDDIGNNQSSSEEESVNNLFYEYDSD 417

The following BLAST results are available for this feature:
BLAST of Csa6G022360 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RPD1_ARATH1.9e-2627.73Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana GN=RPD1 PE=1 SV=1[more]
BLAST of Csa6G022360 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KAR1_CUCSA1.6e-250100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G022360 PE=4 SV=1[more]
M5XWR3_PRUPE1.6e-15265.71Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006119mg PE=4 SV=1[more]
F6I4B7_VITVI1.1e-15065.01Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0062g01420 PE=4 SV=... [more]
B9T355_RICCO5.6e-15070.37Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0050420 PE=4 SV=1[more]
W9QX20_9ROSA1.1e-14863.89Uncharacterized protein OS=Morus notabilis GN=L484_009881 PE=4 SV=1[more]
BLAST of Csa6G022360 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G48040.16.4e-12957.55 Ubiquitin carboxyl-terminal hydrolase family protein[more]
AT3G58520.12.3e-7038.38 Ubiquitin carboxyl-terminal hydrolase family protein[more]
AT2G39120.15.3e-5937.61 Ubiquitin carboxyl-terminal hydrolase family protein[more]
AT1G71850.19.7e-5332.16 Ubiquitin carboxyl-terminal hydrolase family protein[more]
AT4G24320.11.3e-5236.80 Ubiquitin carboxyl-terminal hydrolase family protein[more]
BLAST of Csa6G022360 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449441530|ref|XP_004138535.1|2.4e-250100.00PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis sativus][more]
gi|659089626|ref|XP_008445613.1|1.9e-23694.56PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo][more]
gi|1009172691|ref|XP_015867411.1|1.1e-15468.98PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1-like [Ziziphus jujuba][more]
gi|1009180117|ref|XP_015871453.1|2.4e-15469.60PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1-like [Ziziphus jujuba][more]
gi|645231844|ref|XP_008222589.1|2.3e-15266.27PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Prunus mume][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR021099PORR_domain
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU119502cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa6G022360.1Csa6G022360.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU119502CU119502transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021099Plant organelle RNA recognition domainPFAMPF11955PORRcoord: 40..370
score: 3.3E
NoneNo IPR availablePANTHERPTHR31476FAMILY NOT NAMEDcoord: 1..416
score: 2.5E