Csa6G020750 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa6G020750
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr6 : 2188677 .. 2189379 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACAAATGGAATGAATCACAAATGCATTTTGATGCAGTAAACATGACATGGAATGGAGGTGCAGGACAGAATGGATCACATACGAAGACTAATTATAATCATACATGTGAGTAACACAGAGTCTAGAACACCAAAACAAATTGATAGATGAACCATTATAAAAAAAAAAATTGAACATCAGATACTGCCCAACATTAAACTCATCACTGGCAATGGAAAAATAAATGTATAGTAGACTAAAAAAAAAGTACTTATGTATTAGGAAAGAACCATGAAAAAAGCATTAGGATAGAACCACCAATTTACTCATCATTGGCTGCACATACCTTCAGTGTTGACCGACGACCCCTGTCATGCTTCGCAGTGCCCCTACTCGGCTTCTGTTCAACATATTAGTGTCGCATCAGGTCGTTCGATCAAAACAAAAGTTAGTAAAATTGTTCTGGGACCGTTAAGGGTTGGAAAGCCACAAGGGTTCATTGGCAAACCAAACATATGGAAAGATGGAAAGAGGATGAGAAATGTTTCGGAGGTAACGCACATTTGTCGCAACCGGTCAACGAAGCGCATCAGAGAGAGGATGAGAACCGTTTTAGAGGTAGCATCGAAATGCAACCATCGCAAAACGAAAATGAGTTTCAACAGCAGGGACATAAAATTGGAGAGAGTAGGACAAAAATCGAAGACGAAGAGAATTTGA

mRNA sequence

ATGAACAAATGGAATGAATCACAAATGCATTTTGATGCAGTAAACATGACATGGAATGGAGGTGCAGGACAGAATGGATCACATACGAAGACTAATTATAATCATACATTGTTGACCGACGACCCCTGTCATGCTTCGCAGTGCCCCTACTCGGCTTCTGTTCAACATATTAGTGTCGCATCAGGTCGTTCGATCAAAACAAAAGTTAGTAAAATTGTTCTGGGACCGTTAAGGGTTGGAAAGCCACAAGGGTTCATTGGCAAACCAAACATATGGAAAGATGGAAAGAGGATGAGAAATGTTTCGGAGGTAACGCACATTTGTCGCAACCGGTCAACGAAGCGCATCAGAGAGAGGATGAGAACCGTTTTAGAGGTAGCATCGAAATGCAACCATCGCAAAACGAAAATGAGTTTCAACAGCAGGGACATAAAATTGGAGAGAGTAGGACAAAAATCGAAGACGAAGAGAATTTGA

Coding sequence (CDS)

ATGAACAAATGGAATGAATCACAAATGCATTTTGATGCAGTAAACATGACATGGAATGGAGGTGCAGGACAGAATGGATCACATACGAAGACTAATTATAATCATACATTGTTGACCGACGACCCCTGTCATGCTTCGCAGTGCCCCTACTCGGCTTCTGTTCAACATATTAGTGTCGCATCAGGTCGTTCGATCAAAACAAAAGTTAGTAAAATTGTTCTGGGACCGTTAAGGGTTGGAAAGCCACAAGGGTTCATTGGCAAACCAAACATATGGAAAGATGGAAAGAGGATGAGAAATGTTTCGGAGGTAACGCACATTTGTCGCAACCGGTCAACGAAGCGCATCAGAGAGAGGATGAGAACCGTTTTAGAGGTAGCATCGAAATGCAACCATCGCAAAACGAAAATGAGTTTCAACAGCAGGGACATAAAATTGGAGAGAGTAGGACAAAAATCGAAGACGAAGAGAATTTGA

Protein sequence

MNKWNESQMHFDAVNMTWNGGAGQNGSHTKTNYNHTLLTDDPCHASQCPYSASVQHISVASGRSIKTKVSKIVLGPLRVGKPQGFIGKPNIWKDGKRMRNVSEVTHICRNRSTKRIRERMRTVLEVASKCNHRKTKMSFNSRDIKLERVGQKSKTKRI*
Homology
[Close]
BLAST of Csa6G020750 vs. TrEMBL
Match: A0A0A0KC05_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G020750 PE=4 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 2.5e-87
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 1 

Query: 1   MNKWNESQMHFDAVNMTWNGGAGQNGSHTKTNYNHTLLTDDPCHASQCPYSASVQHISVA 60
           MNKWNESQMHFDAVNMTWNGGAGQNGSHTKTNYNHTLLTDDPCHASQCPYSASVQHISVA
Sbjct: 1   MNKWNESQMHFDAVNMTWNGGAGQNGSHTKTNYNHTLLTDDPCHASQCPYSASVQHISVA 60

Query: 61  SGRSIKTKVSKIVLGPLRVGKPQGFIGKPNIWKDGKRMRNVSEVTHICRNRSTKRIRERM 120
           SGRSIKTKVSKIVLGPLRVGKPQGFIGKPNIWKDGKRMRNVSEVTHICRNRSTKRIRERM
Sbjct: 61  SGRSIKTKVSKIVLGPLRVGKPQGFIGKPNIWKDGKRMRNVSEVTHICRNRSTKRIRERM 120

Query: 121 RTVLEVASKCNHRKTKMSFNSRDIKLERVGQKSKTKRI 159
           RTVLEVASKCNHRKTKMSFNSRDIKLERVGQKSKTKRI
Sbjct: 121 RTVLEVASKCNHRKTKMSFNSRDIKLERVGQKSKTKRI 158

[Close]
BLAST of Csa6G020750 vs. NCBI nr
Match: gi|700190708|gb|KGN45912.1| (hypothetical protein Csa_6G020750 [Cucumis sativus])

HSP 1 Score: 329.3 bits (843), Expect = 3.6e-87
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 1 

Query: 1   MNKWNESQMHFDAVNMTWNGGAGQNGSHTKTNYNHTLLTDDPCHASQCPYSASVQHISVA 60
           MNKWNESQMHFDAVNMTWNGGAGQNGSHTKTNYNHTLLTDDPCHASQCPYSASVQHISVA
Sbjct: 1   MNKWNESQMHFDAVNMTWNGGAGQNGSHTKTNYNHTLLTDDPCHASQCPYSASVQHISVA 60

Query: 61  SGRSIKTKVSKIVLGPLRVGKPQGFIGKPNIWKDGKRMRNVSEVTHICRNRSTKRIRERM 120
           SGRSIKTKVSKIVLGPLRVGKPQGFIGKPNIWKDGKRMRNVSEVTHICRNRSTKRIRERM
Sbjct: 61  SGRSIKTKVSKIVLGPLRVGKPQGFIGKPNIWKDGKRMRNVSEVTHICRNRSTKRIRERM 120

Query: 121 RTVLEVASKCNHRKTKMSFNSRDIKLERVGQKSKTKRI 159
           RTVLEVASKCNHRKTKMSFNSRDIKLERVGQKSKTKRI
Sbjct: 121 RTVLEVASKCNHRKTKMSFNSRDIKLERVGQKSKTKRI 158

The following BLAST results are available for this feature:
BLAST of Csa6G020750 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KC05_CUCSA2.5e-87100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G020750 PE=4 SV=1[more]
BLAST of Csa6G020750 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700190708|gb|KGN45912.1|3.6e-87100.00hypothetical protein Csa_6G020750 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa6G020750.1Csa6G020750.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa6G020750Cucurbita moschata (Rifu)cmocuB888
Csa6G020750Melon (DHL92) v3.5.1cumeB418
Csa6G020750Watermelon (Charleston Gray)cuwcgB504
Csa6G020750Watermelon (97103) v1cuwmB463
Csa6G020750Watermelon (97103) v1cuwmB475
Csa6G020750Cucumber (Gy14) v2cgybcuB282
Csa6G020750Melon (DHL92) v3.6.1cumedB455
Csa6G020750Watermelon (97103) v2cuwmbB490
Csa6G020750Cucumber (Gy14) v1cgycuB511