Csa6G020210 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGATTTCAAATCTTCTTTTTGGCAACTTCTTCTACCAAGTATCTTTTCTACACAAAAACAACCAAGATCATGATGCTCGCAAATACAATGAACTATCTGATCTCATCACCCCTAAATTGACCTTCTTTTGGCTCTTCAACATCTCTTACATAGTCTTCCTCTTCGTTTTCTCTCTCCTTTCGACCTCCGCAGTTGTTTATACGGTCGCTTGCATACACACAGGTAAGAACGAAGAAGCAACTCCACTCTCTAATTTAACTTTGTGATGAAGTTTTCAAGATTAATAATGTATTTGTTCTATTCTTTTCGAAGATGTTTTAATTTTGATCATGTGTTTTAACCCTTTTCAACTGTACCATTTTCGTTTGTGAAAACATTTTAATGAAATGATGTTTCATCATAGGTAATATCGATAATATCGAGATTTAGATTTTATAGAAATATCGATAGAAATTTTGAAAAACTTTATGAAAATGAATAATGAAAATTTGTATAATTAATTATTTATTGGAACTCTAATTGTGACATAATAATTTTTAATATAATCATCTTTTCTAGATAGTGAGACACCAATTAGATGGATATTGTAAACATGTGTAAATTTCGATCTGAGTTTAGAAATCTAGAAATAAAAGAAATGAACAAATAATTGCAAATGATGTCAAATATTAAACCATTACAACTTTAGAGAGAGATGATATAATTGCCTAATTGTAAGTTGTTTATTAGAGAGAGAGAGATCATCTTCCTCCTTCGGATGGATAACTTAGTGAAAAGTAATATTTTGGTTTGAATGAAGTAAAAGAAAAACATCTGACTACTTAAAAATGGAAATTTTGGATGGTAAAAGAAACGAAAACTCATATCTCAATTCAATCTTAGGTGAAACTATACAAAGAATGCCATAATATAACAGTAACATGCATACTTCCTAAACTGAAATTTACCACTAGATATGGTTTCAAATCATCACGCAATATTTGGTGACTTGAAATCAAAACAAAATAACAATTAGATAAAGAAAAACGGTGGAAAGTTTCGCCGTAATAACATGAGATTTGTGAAAGTTGAATGAGTTACCAAAAGTTTAGAGGAAAAATTCGGTCAACGAAAAAAAGGAAAGTTTTCTACTAATCTTCTGATTTTATATATCATTGTTTGTAGAAATCTTGAGTTGTTCTCTTTACGTTGACTTTGGTAATTACTATTTTTTTCTTCTGAAAGAAATACACAAACACTTCATTGATTGTAGTTCCTAGACTAATCTTTTGTTATCTTACAAAAATGTTATTAGTATACCAAATTGTTTTAATTTGTTCAAAGTGTTTTCGAACTTCTTATCATGAAATTGACTCCTACTCCTTTAGCATATTTTGTTGAGTTGTGTGAACTGTTTTTGTGCTGTGTTCGTTTCTTTGTCTTCGTTTCTTTCATCTTTTCTGCTCGTATGTTGATTATGTGTTGACCCGACGCTGTAAAAAATTAAATACCGTTTTGAACATTTTCTAAAATAATTATTATATGAAAAAAAGGCGTTGATAACAATTTTCATTCAAACTTCTTAACATATTCTATTGAGCATACGCAACATGTTACAATGTAAGTCGACCTTTTTGCTTCTCTATGAATTTTCTGATTCCACTTATGAACGCAGGTCGAGAGATATCTTTCAAGCAAATCATTAGCATTGTGCCCAAAGTTTGGAAACGACTTGTAGTCACGTTTTTCTGCGTTTTCGCCTCATTCTTTGTCTATAATCTGCTTGCAGTATTCGCTTTCATTTTACTTCTTTTCATTCTCCTAGTACAATATGGGCCATTCGGCGATGTCAATGGTTCAATCTTCGTCGTCTTCTTCATTCTCTACTTCATTGGCTTATTATATTTAAGTGTCATAGTTCAACTTTCGAGCGTTGTAACGGTTTTAGAAGAATCATATGGATTTAAAGCAATGGTGAAGAGTAAGGCGCTCTTGAAGGGAAACATGTTAGTAGCCACACTCATGTTGTTGCTTATCAATATCTCTTTAGTGATCATTCAACAGGCTTTTGTGAAGCTTGTGGTTCATGGAGTTTGGTTTGGAATACTTGGGAGGGGTATTTTGGGAATAGTCTGCTTGTTCTTGCTTTTGAATTTCTTCTTATGGCAGCTTGTTTTGGAGACAGTATTGTATTTTGTCTGCAAAGAACAGCACCAAGAGAATATCGACAAGTCGGCGCTATCAAATCATCTTCAAGTTTATTTGTTGAATGGATATATCCCTTTGACGCCCAAAAGTGTTGAGCTTGAAAATCGTGAAGAAGTTTGA ATGGAGATTTCAAATCTTCTTTTTGGCAACTTCTTCTACCAAGTATCTTTTCTACACAAAAACAACCAAGATCATGATGCTCGCAAATACAATGAACTATCTGATCTCATCACCCCTAAATTGACCTTCTTTTGGCTCTTCAACATCTCTTACATAGTCTTCCTCTTCGTTTTCTCTCTCCTTTCGACCTCCGCAGTTGTTTATACGGTCGCTTGCATACACACAGGTCGAGAGATATCTTTCAAGCAAATCATTAGCATTGTGCCCAAAGTTTGGAAACGACTTGTAGTCACGTTTTTCTGCGTTTTCGCCTCATTCTTTGTCTATAATCTGCTTGCAGTATTCGCTTTCATTTTACTTCTTTTCATTCTCCTAGTACAATATGGGCCATTCGGCGATGTCAATGGTTCAATCTTCGTCGTCTTCTTCATTCTCTACTTCATTGGCTTATTATATTTAAGTGTCATAGTTCAACTTTCGAGCGTTGTAACGGTTTTAGAAGAATCATATGGATTTAAAGCAATGGTGAAGAGTAAGGCGCTCTTGAAGGGAAACATGTTAGTAGCCACACTCATGTTGTTGCTTATCAATATCTCTTTAGTGATCATTCAACAGGCTTTTGTGAAGCTTGTGGTTCATGGAGTTTGGTTTGGAATACTTGGGAGGGGTATTTTGGGAATAGTCTGCTTGTTCTTGCTTTTGAATTTCTTCTTATGGCAGCTTGTTTTGGAGACAGTATTGTATTTTGTCTGCAAAGAACAGCACCAAGAGAATATCGACAAGTCGGCGCTATCAAATCATCTTCAAGTTTATTTGTTGAATGGATATATCCCTTTGACGCCCAAAAGTGTTGAGCTTGAAAATCGTGAAGAAGTTTGA ATGGAGATTTCAAATCTTCTTTTTGGCAACTTCTTCTACCAAGTATCTTTTCTACACAAAAACAACCAAGATCATGATGCTCGCAAATACAATGAACTATCTGATCTCATCACCCCTAAATTGACCTTCTTTTGGCTCTTCAACATCTCTTACATAGTCTTCCTCTTCGTTTTCTCTCTCCTTTCGACCTCCGCAGTTGTTTATACGGTCGCTTGCATACACACAGGTCGAGAGATATCTTTCAAGCAAATCATTAGCATTGTGCCCAAAGTTTGGAAACGACTTGTAGTCACGTTTTTCTGCGTTTTCGCCTCATTCTTTGTCTATAATCTGCTTGCAGTATTCGCTTTCATTTTACTTCTTTTCATTCTCCTAGTACAATATGGGCCATTCGGCGATGTCAATGGTTCAATCTTCGTCGTCTTCTTCATTCTCTACTTCATTGGCTTATTATATTTAAGTGTCATAGTTCAACTTTCGAGCGTTGTAACGGTTTTAGAAGAATCATATGGATTTAAAGCAATGGTGAAGAGTAAGGCGCTCTTGAAGGGAAACATGTTAGTAGCCACACTCATGTTGTTGCTTATCAATATCTCTTTAGTGATCATTCAACAGGCTTTTGTGAAGCTTGTGGTTCATGGAGTTTGGTTTGGAATACTTGGGAGGGGTATTTTGGGAATAGTCTGCTTGTTCTTGCTTTTGAATTTCTTCTTATGGCAGCTTGTTTTGGAGACAGTATTGTATTTTGTCTGCAAAGAACAGCACCAAGAGAATATCGACAAGTCGGCGCTATCAAATCATCTTCAAGTTTATTTGTTGAATGGATATATCCCTTTGACGCCCAAAAGTGTTGAGCTTGAAAATCGTGAAGAAGTTTGA MEISNLLFGNFFYQVSFLHKNNQDHDARKYNELSDLITPKLTFFWLFNISYIVFLFVFSLLSTSAVVYTVACIHTGREISFKQIISIVPKVWKRLVVTFFCVFASFFVYNLLAVFAFILLLFILLVQYGPFGDVNGSIFVVFFILYFIGLLYLSVIVQLSSVVTVLEESYGFKAMVKSKALLKGNMLVATLMLLLINISLVIIQQAFVKLVVHGVWFGILGRGILGIVCLFLLLNFFLWQLVLETVLYFVCKEQHQENIDKSALSNHLQVYLLNGYIPLTPKSVELENREEV*
BLAST of Csa6G020210 vs. TrEMBL
Match: A0A0A0KBZ8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G020210 PE=4 SV=1) HSP 1 Score: 573.5 bits (1477), Expect = 1.4e-160 Identity = 292/292 (100.00%), Postives = 292/292 (100.00%), Query Frame = 1
BLAST of Csa6G020210 vs. TrEMBL
Match: A0A067LG03_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25260 PE=4 SV=1) HSP 1 Score: 288.1 bits (736), Expect = 1.2e-74 Identity = 151/294 (51.36%), Postives = 212/294 (72.11%), Query Frame = 1
BLAST of Csa6G020210 vs. TrEMBL
Match: M5VKD3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008434mg PE=4 SV=1) HSP 1 Score: 286.2 bits (731), Expect = 4.5e-74 Identity = 147/287 (51.22%), Postives = 199/287 (69.34%), Query Frame = 1
BLAST of Csa6G020210 vs. TrEMBL
Match: F6GZU7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g15120 PE=4 SV=1) HSP 1 Score: 280.4 bits (716), Expect = 2.5e-72 Identity = 142/282 (50.35%), Postives = 206/282 (73.05%), Query Frame = 1
BLAST of Csa6G020210 vs. TrEMBL
Match: A0A061FGQ7_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_035327 PE=4 SV=1) HSP 1 Score: 273.1 bits (697), Expect = 4.0e-70 Identity = 139/287 (48.43%), Postives = 201/287 (70.03%), Query Frame = 1
BLAST of Csa6G020210 vs. TAIR10
Match: AT4G19950.1 (AT4G19950.1 unknown protein) HSP 1 Score: 154.1 bits (388), Expect = 1.4e-37 Identity = 100/252 (39.68%), Postives = 145/252 (57.54%), Query Frame = 1
BLAST of Csa6G020210 vs. TAIR10
Match: AT1G31130.1 (AT1G31130.1 unknown protein) HSP 1 Score: 150.6 bits (379), Expect = 1.5e-36 Identity = 95/250 (38.00%), Postives = 145/250 (58.00%), Query Frame = 1
BLAST of Csa6G020210 vs. TAIR10
Match: AT5G44860.1 (AT5G44860.1 unknown protein) HSP 1 Score: 146.7 bits (369), Expect = 2.2e-35 Identity = 97/253 (38.34%), Postives = 142/253 (56.13%), Query Frame = 1
BLAST of Csa6G020210 vs. TAIR10
Match: AT1G69430.1 (AT1G69430.1 unknown protein) HSP 1 Score: 73.6 bits (179), Expect = 2.3e-13 Identity = 58/220 (26.36%), Postives = 105/220 (47.73%), Query Frame = 1
BLAST of Csa6G020210 vs. TAIR10
Match: AT1G26650.1 (AT1G26650.1 unknown protein) HSP 1 Score: 70.5 bits (171), Expect = 2.0e-12 Identity = 59/208 (28.37%), Postives = 103/208 (49.52%), Query Frame = 1
BLAST of Csa6G020210 vs. NCBI nr
Match: gi|778721979|ref|XP_011658384.1| (PREDICTED: uncharacterized protein LOC105435981 [Cucumis sativus]) HSP 1 Score: 573.5 bits (1477), Expect = 2.0e-160 Identity = 292/292 (100.00%), Postives = 292/292 (100.00%), Query Frame = 1
BLAST of Csa6G020210 vs. NCBI nr
Match: gi|700190703|gb|KGN45907.1| (hypothetical protein Csa_6G020210 [Cucumis sativus]) HSP 1 Score: 573.5 bits (1477), Expect = 2.0e-160 Identity = 292/292 (100.00%), Postives = 292/292 (100.00%), Query Frame = 1
BLAST of Csa6G020210 vs. NCBI nr
Match: gi|659128735|ref|XP_008464345.1| (PREDICTED: uncharacterized protein LOC103502253 [Cucumis melo]) HSP 1 Score: 543.1 bits (1398), Expect = 3.0e-151 Identity = 277/293 (94.54%), Postives = 283/293 (96.59%), Query Frame = 1
BLAST of Csa6G020210 vs. NCBI nr
Match: gi|802559299|ref|XP_012066108.1| (PREDICTED: uncharacterized protein LOC105629177 [Jatropha curcas]) HSP 1 Score: 288.1 bits (736), Expect = 1.7e-74 Identity = 151/294 (51.36%), Postives = 212/294 (72.11%), Query Frame = 1
BLAST of Csa6G020210 vs. NCBI nr
Match: gi|595793283|ref|XP_007200390.1| (hypothetical protein PRUPE_ppa008434mg [Prunus persica]) HSP 1 Score: 286.2 bits (731), Expect = 6.5e-74 Identity = 147/287 (51.22%), Postives = 199/287 (69.34%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|