Csa6G020150 (gene) Cucumber (Chinese Long) v2

NameCsa6G020150
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr6 : 2137614 .. 2137880 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGACACACCAAAGAATTGGCGAAGGATGCACAATGTGTCGACAAAACGATTGCCGATGCAAGTCAAAACGTCGATAACAACGTCAAGAAAAACCGTTAGTGAAACATTGACCGATGTGGTGATGGCCCACGTCAGCGAAACCTTATCTCCGAGGCAAAAAAATTCAACACATAGAGGATGTCGGTTACTAGCTAAACTCGATGTGACTACAATACGTCCAAATACCAAAGTCAAACATTGTGTCGACACAAGGTTTCTTTGA

mRNA sequence

ATGGCCGACACACCAAAGAATTGGCGAAGGATGCACAATGTGTCGACAAAACGATTGCCGATGCAAGTCAAAACGTCGATAACAACGTCAAGAAAAACCGTTAGTGAAACATTGACCGATGTGGTGATGGCCCACGTCAGCGAAACCTTATCTCCGAGGCAAAAAAATTCAACACATAGAGGATGTCGGTTACTAGCTAAACTCGATGTGACTACAATACGTCCAAATACCAAAGTCAAACATTGTGTCGACACAAGGTTTCTTTGA

Coding sequence (CDS)

ATGGCCGACACACCAAAGAATTGGCGAAGGATGCACAATGTGTCGACAAAACGATTGCCGATGCAAGTCAAAACGTCGATAACAACGTCAAGAAAAACCGTTAGTGAAACATTGACCGATGTGGTGATGGCCCACGTCAGCGAAACCTTATCTCCGAGGCAAAAAAATTCAACACATAGAGGATGTCGGTTACTAGCTAAACTCGATGTGACTACAATACGTCCAAATACCAAAGTCAAACATTGTGTCGACACAAGGTTTCTTTGA

Protein sequence

MADTPKNWRRMHNVSTKRLPMQVKTSITTSRKTVSETLTDVVMAHVSETLSPRQKNSTHRGCRLLAKLDVTTIRPNTKVKHCVDTRFL*
BLAST of Csa6G020150 vs. TrEMBL
Match: A0A0A0KDP4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G020150 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 1.1e-42
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 1

Query: 1  MADTPKNWRRMHNVSTKRLPMQVKTSITTSRKTVSETLTDVVMAHVSETLSPRQKNSTHR 60
          MADTPKNWRRMHNVSTKRLPMQVKTSITTSRKTVSETLTDVVMAHVSETLSPRQKNSTHR
Sbjct: 1  MADTPKNWRRMHNVSTKRLPMQVKTSITTSRKTVSETLTDVVMAHVSETLSPRQKNSTHR 60

Query: 61 GCRLLAKLDVTTIRPNTKVKHCVDTRFL 89
          GCRLLAKLDVTTIRPNTKVKHCVDTRFL
Sbjct: 61 GCRLLAKLDVTTIRPNTKVKHCVDTRFL 88

BLAST of Csa6G020150 vs. NCBI nr
Match: gi|700190697|gb|KGN45901.1| (hypothetical protein Csa_6G020150 [Cucumis sativus])

HSP 1 Score: 180.3 bits (456), Expect = 1.5e-42
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 1

Query: 1  MADTPKNWRRMHNVSTKRLPMQVKTSITTSRKTVSETLTDVVMAHVSETLSPRQKNSTHR 60
          MADTPKNWRRMHNVSTKRLPMQVKTSITTSRKTVSETLTDVVMAHVSETLSPRQKNSTHR
Sbjct: 1  MADTPKNWRRMHNVSTKRLPMQVKTSITTSRKTVSETLTDVVMAHVSETLSPRQKNSTHR 60

Query: 61 GCRLLAKLDVTTIRPNTKVKHCVDTRFL 89
          GCRLLAKLDVTTIRPNTKVKHCVDTRFL
Sbjct: 61 GCRLLAKLDVTTIRPNTKVKHCVDTRFL 88

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KDP4_CUCSA1.1e-42100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G020150 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700190697|gb|KGN45901.1|1.5e-42100.00hypothetical protein Csa_6G020150 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa6G020150.1Csa6G020150.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None