Csa6G012230 (gene) Cucumber (Chinese Long) v2

NameCsa6G012230
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr6 : 1326181 .. 1326339 (+)
   



The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTGAGTTAGAGGAGGGGGGTAAGAGGGGAGAAAGTGAGAATGGTGTTGAAGGTAACAATGGAGATCATGGTGAGTTAAAGAAAAGGAGAGAGTGGGAAGTAGAAAATGGAGACGCGAAGTCCAGTCGGCATCCGACGGAGAGAAGTGCTGGATGA

mRNA sequence

ATGAGTGAGTTAGAGGAGGGGGGTAAGAGGGGAGAAAGTGAGAATGGTGTTGAAGGTAACAATGGAGATCATGGTGAGTTAAAGAAAAGGAGAGAGTGGGAAGTAGAAAATGGAGACGCGAAGTCCAGTCGGCATCCGACGGAGAGAAGTGCTGGATGA

Coding sequence (CDS)

ATGAGTGAGTTAGAGGAGGGGGGTAAGAGGGGAGAAAGTGAGAATGGTGTTGAAGGTAACAATGGAGATCATGGTGAGTTAAAGAAAAGGAGAGAGTGGGAAGTAGAAAATGGAGACGCGAAGTCCAGTCGGCATCCGACGGAGAGAAGTGCTGGATGA

Protein sequence

MSELEEGGKRGESENGVEGNNGDHGELKKRREWEVENGDAKSSRHPTERSAG*
BLAST of Csa6G012230 vs. TrEMBL
Match: A0A0A0K8L1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G012230 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 2.8e-22
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 1

Query: 1  MSELEEGGKRGESENGVEGNNGDHGELKKRREWEVENGDAKSSRHPTERSAG 53
          MSELEEGGKRGESENGVEGNNGDHGELKKRREWEVENGDAKSSRHPTERSAG
Sbjct: 1  MSELEEGGKRGESENGVEGNNGDHGELKKRREWEVENGDAKSSRHPTERSAG 52

BLAST of Csa6G012230 vs. NCBI nr
Match: gi|700190594|gb|KGN45798.1| (hypothetical protein Csa_6G012230 [Cucumis sativus])

HSP 1 Score: 111.7 bits (278), Expect = 4.0e-22
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 1

Query: 1  MSELEEGGKRGESENGVEGNNGDHGELKKRREWEVENGDAKSSRHPTERSAG 53
          MSELEEGGKRGESENGVEGNNGDHGELKKRREWEVENGDAKSSRHPTERSAG
Sbjct: 1  MSELEEGGKRGESENGVEGNNGDHGELKKRREWEVENGDAKSSRHPTERSAG 52

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0K8L1_CUCSA2.8e-22100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G012230 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700190594|gb|KGN45798.1|4.0e-22100.00hypothetical protein Csa_6G012230 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa6G012230.1Csa6G012230.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa6G012230Cucurbita moschata (Rifu)cmocuB296
Csa6G012230Cucurbita moschata (Rifu)cmocuB671
Csa6G012230Cucurbita moschata (Rifu)cmocuB759
Csa6G012230Cucurbita moschata (Rifu)cmocuB764
Csa6G012230Melon (DHL92) v3.5.1cumeB459
Csa6G012230Melon (DHL92) v3.5.1cumeB467
Csa6G012230Melon (DHL92) v3.5.1cumeB506
Csa6G012230Watermelon (Charleston Gray)cuwcgB429
Csa6G012230Watermelon (Charleston Gray)cuwcgB467
Csa6G012230Watermelon (Charleston Gray)cuwcgB490
Csa6G012230Watermelon (97103) v1cuwmB482
Csa6G012230Watermelon (97103) v1cuwmB508
Csa6G012230Watermelon (97103) v1cuwmB533
Csa6G012230Cucurbita pepo (Zucchini)cpecuB086
Csa6G012230Cucurbita pepo (Zucchini)cpecuB198
Csa6G012230Cucurbita pepo (Zucchini)cpecuB460
Csa6G012230Cucurbita pepo (Zucchini)cpecuB465
Csa6G012230Bottle gourd (USVL1VR-Ls)culsiB432
Csa6G012230Bottle gourd (USVL1VR-Ls)culsiB444
Csa6G012230Bottle gourd (USVL1VR-Ls)culsiB458
Csa6G012230Cucumber (Gy14) v2cgybcuB184
Csa6G012230Cucumber (Gy14) v2cgybcuB282
Csa6G012230Melon (DHL92) v3.6.1cumedB448
Csa6G012230Melon (DHL92) v3.6.1cumedB491
Csa6G012230Silver-seed gourdcarcuB0023
Csa6G012230Silver-seed gourdcarcuB0297
Csa6G012230Silver-seed gourdcarcuB0586
Csa6G012230Silver-seed gourdcarcuB0697
Csa6G012230Watermelon (97103) v2cuwmbB423
Csa6G012230Watermelon (97103) v2cuwmbB458
Csa6G012230Watermelon (97103) v2cuwmbB482
Csa6G012230Wax gourdcuwgoB586
Csa6G012230Cucumber (Chinese Long) v2cucuB144
Csa6G012230Cucumber (Chinese Long) v2cucuB163
Csa6G012230Cucumber (Gy14) v1cgycuB195
Csa6G012230Cucurbita maxima (Rimu)cmacuB309
Csa6G012230Cucurbita maxima (Rimu)cmacuB682
Csa6G012230Cucurbita maxima (Rimu)cmacuB768
Csa6G012230Cucurbita maxima (Rimu)cmacuB772
Csa6G012230Cucurbita maxima (Rimu)cmacuB774
Csa6G012230Cucurbita maxima (Rimu)cmacuB876