Csa6G011720 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa6G011720
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionTranscription factor bHLH51; contains IPR011598 (Myc-type, basic helix-loop-helix (bHLH) domain)
LocationChr6 : 1305585 .. 1307128 (+)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CACACACACACAACAACACCATCATCAACAACAACACATTATTATTAGTGCAATCAACAGTATCTCTCCAGATGCAACCATAAAAACCAAACTTTTGGGTTTGATTTCACAAGACTGGCCCCTGCCTCCTCTTTTGCATCAGTAATGGAAGATAGCAACTGGGATCGTTCTACTAAGCCTGAGGGGCTAAATTTTGATCACTGCAATCCCAATTCAAGCCAGGAAGCTTCTCTTCTTCTTCCATGGATGATCAATCCTCAGTTTTCAAGCTCAAATGAGTTCTTCCCTTCATTTTCAACTCCATCAGAAGGAATTATTGTTGAAGATAGAGCAGCTTCTGCTTCAAAAAGCCATAGCCAAGCAGAAAAGAGACGTAGAGACAGAATCAATGCTCAGCTTGCAACTCTTAGGAAACTCATTCCCAAATCTGATAAGGTACTCTTCTCTCTCTCTCTCTCTCTCTCTCTCGCTAGCCTTGTCTCTTTCTAATTGGGATGGACCTGAGACACTGAAACATAGCAAAACGTATCTACTTTTTCATTCTCCTAGTAGATTACAGATCCCATGTCAACAGATAGAGATTATTAGAGTAATCAGCATAGAGCAATACAAGTTTATGAACTTTAGTGAAAGAGGACTTATAAAATTGCATAGTTGTTACTCTGTGAAGAAGCATATACCATCAAAGAGAAACTCTGCAGCACATGCTTAGATCCATCTTCTTGTTTCCTATGGCAGATGGATAAAGCAGCTTTGTTGGGAAGCGCAATCGATCAAGTGAAAGATCTGAAACGAAAAGCAATGGAAGCCAGCAAGAACATGACAGTTCCAACAGACATGGATGAAGTAACTATTGACTCCACTGTGGTTGAAGACAATAGCAGGAATAACATTGCGATAAAGGTATCGGTTAGTTGTGACGATCGGCCAGAACTGTTCACAGAGCTCATCCAAGTGATCAAAGGATTGAAGCTCACAACAATAAGAGCTGATATGGCCAGTGTTGGTGGTCGCATTAAAAGCATACTTATCCTTTGCAATAAAGATGGTGAAAAAAGTGTCTGCTTAAACACTGTTCAGCAGTCTCTTAAATTAGTTTTAAGTCGAATGTCATCGTCATCAACTGCCTCAACCTATCGTATTAGAAGTAAACGACAGAGGTTCTTCCTCCCTTCGCAATATTCAAAGTAGTTTCTCTTCAATTATTTAACCAAGAATAGAGTTATTGATTGAAAACCATGCTTCAATACAATCACAATGGATTGAACGAATGATACAAGGCAAAAGCTGAAGCTAAAGCCAACAACTGTTTCTAATTAGAACGAGAGAGTTTTGCTGTTGAGATTCCAAGTTGGAAAACAAAACTAGATAGGTAAAATCCATCAAAAGATTCGTTAAAGTGTAGTATTGGAAAGACGGACGAGTCAAAGAACACCAATATGTCTCATTATGTTAGTTTTCCCTTGACACAACATATAGCAACTTTTCATGAAGTATTAAGATCATGGCGTACTTAAACAGCCTTGCATTGACCGAAGAGGTGT

mRNA sequence

ATGGAAGATAGCAACTGGGATCGTTCTACTAAGCCTGAGGGGCTAAATTTTGATCACTGCAATCCCAATTCAAGCCAGGAAGCTTCTCTTCTTCTTCCATGGATGATCAATCCTCAGTTTTCAAGCTCAAATGAGTTCTTCCCTTCATTTTCAACTCCATCAGAAGGAATTATTGTTGAAGATAGAGCAGCTTCTGCTTCAAAAAGCCATAGCCAAGCAGAAAAGAGACGTAGAGACAGAATCAATGCTCAGCTTGCAACTCTTAGGAAACTCATTCCCAAATCTGATAAGATGGATAAAGCAGCTTTGTTGGGAAGCGCAATCGATCAAGTGAAAGATCTGAAACGAAAAGCAATGGAAGCCAGCAAGAACATGACAGTTCCAACAGACATGGATGAAGTAACTATTGACTCCACTGTGGTTGAAGACAATAGCAGGAATAACATTGCGATAAAGGTATCGGTTAGTTGTGACGATCGGCCAGAACTGTTCACAGAGCTCATCCAAGTGATCAAAGGATTGAAGCTCACAACAATAAGAGCTGATATGGCCAGTGTTGGTGGTCGCATTAAAAGCATACTTATCCTTTGCAATAAAGATGGTGAAAAAAGTGTCTGCTTAAACACTGTTCAGCAGTCTCTTAAATTAGTTTTAAGTCGAATGTCATCGTCATCAACTGCCTCAACCTATCGTATTAGAAGTAAACGACAGAGGTTCTTCCTCCCTTCGCAATATTCAAAGTAG

Coding sequence (CDS)

ATGGAAGATAGCAACTGGGATCGTTCTACTAAGCCTGAGGGGCTAAATTTTGATCACTGCAATCCCAATTCAAGCCAGGAAGCTTCTCTTCTTCTTCCATGGATGATCAATCCTCAGTTTTCAAGCTCAAATGAGTTCTTCCCTTCATTTTCAACTCCATCAGAAGGAATTATTGTTGAAGATAGAGCAGCTTCTGCTTCAAAAAGCCATAGCCAAGCAGAAAAGAGACGTAGAGACAGAATCAATGCTCAGCTTGCAACTCTTAGGAAACTCATTCCCAAATCTGATAAGATGGATAAAGCAGCTTTGTTGGGAAGCGCAATCGATCAAGTGAAAGATCTGAAACGAAAAGCAATGGAAGCCAGCAAGAACATGACAGTTCCAACAGACATGGATGAAGTAACTATTGACTCCACTGTGGTTGAAGACAATAGCAGGAATAACATTGCGATAAAGGTATCGGTTAGTTGTGACGATCGGCCAGAACTGTTCACAGAGCTCATCCAAGTGATCAAAGGATTGAAGCTCACAACAATAAGAGCTGATATGGCCAGTGTTGGTGGTCGCATTAAAAGCATACTTATCCTTTGCAATAAAGATGGTGAAAAAAGTGTCTGCTTAAACACTGTTCAGCAGTCTCTTAAATTAGTTTTAAGTCGAATGTCATCGTCATCAACTGCCTCAACCTATCGTATTAGAAGTAAACGACAGAGGTTCTTCCTCCCTTCGCAATATTCAAAGTAG

Protein sequence

MEDSNWDRSTKPEGLNFDHCNPNSSQEASLLLPWMINPQFSSSNEFFPSFSTPSEGIIVEDRAASASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLGSAIDQVKDLKRKAMEASKNMTVPTDMDEVTIDSTVVEDNSRNNIAIKVSVSCDDRPELFTELIQVIKGLKLTTIRADMASVGGRIKSILILCNKDGEKSVCLNTVQQSLKLVLSRMSSSSTASTYRIRSKRQRFFLPSQYSK*
Homology
[Close]
BLAST of Csa6G011720 vs. Swiss-Prot
Match: BH051_ARATH (Transcription factor bHLH51 OS=Arabidopsis thaliana GN=BHLH51 PE=2 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 1.6e-41
Identity = 108/254 (42.52%), Postives = 157/254 (61.81%), Query Frame = 1 

Query: 2   EDSNWDRSTKPEGLNFDHCNPNSSQEASLLLPWMINPQFSSSNEFFPSFSTPSEGIIVE- 61
           + S W  ST P  +++   + +S  + +       N  FSSS+ F  +F  P++  +   
Sbjct: 6   DSSKWSDSTTPYMVSWSLQSESSDSDWN-----RFNLGFSSSS-FGGNF--PADDCVGGI 65

Query: 62  DRAASASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLGSAIDQVKDLKRKAME 121
           ++A S S+SH  AEKRRRDRIN+ L  LRKL+P SDK+DKAALL + I+QVK+LK+KA E
Sbjct: 66  EKAESLSRSHRLAEKRRRDRINSHLTALRKLVPNSDKLDKAALLATVIEQVKELKQKAAE 125

Query: 122 ASKNMTVPTDMDEVTIDSTVVED--NSRNNIAIKVSVSCDDRPELFTELIQVIKGLKLTT 181
           +     +PT+ DEVT+    + D  ++ N I  K S  C+D+PE  +E+I+V+  L+L T
Sbjct: 126 SPIFQDLPTEADEVTVQPETISDFESNTNTIIFKASFCCEDQPEAISEIIRVLTKLQLET 185

Query: 182 IRADMASVGGRIKSILIL----CNKDGEKSVCLNTVQQSLKLVLSRMSSSS--TASTYRI 241
           I+A++ SVGGR++   IL    CN+    +     ++QSL   L+R++SSS  T+S  RI
Sbjct: 186 IQAEIISVGGRMRINFILKDSNCNETTNIAASAKALKQSLCSALNRITSSSTTTSSVCRI 245

Query: 242 RSKRQRFFLPSQYS 247
           RSKRQR+FL S YS
Sbjct: 246 RSKRQRWFLSSHYS 251

[Close]
BLAST of Csa6G011720 vs. Swiss-Prot
Match: BH030_ARATH (Transcription factor bHLH30 OS=Arabidopsis thaliana GN=BHLH30 PE=1 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 1.6e-33
Identity = 71/186 (38.17%), Postives = 120/186 (64.52%), Query Frame = 1 

Query: 58  IVEDRAASASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLGSAIDQVKDLKRK 117
           I++ +A +ASKSHS+AE+RRR+RIN  LA LR ++P + K DKA+LL   I  VK+LKR+
Sbjct: 166 IMDAKALAASKSHSEAERRRRERINNHLAKLRSILPNTTKTDKASLLAEVIQHVKELKRE 225

Query: 118 AMEASKNMTVPTDMDEVTIDSTVVEDNSRNNIAIKVSVSCDDRPELFTELIQVIKGLKLT 177
               S+   VPT+ DE+T+  T  E+       IK S+ C+DR +L  ++I+ +K ++L 
Sbjct: 226 TSVISETNLVPTESDELTVAFTEEEETGDGRFVIKASLCCEDRSDLLPDMIKTLKAMRLK 285

Query: 178 TIRADMASVGGRIKSILILCNKDG-----EKSVCLNTVQQSLKLVLSRMSSSSTASTYRI 237
           T++A++ +VGGR+K++L +  ++      E+  C+ T++++LK V+ + +   ++S+   
Sbjct: 286 TLKAEITTVGGRVKNVLFVTGEESSGEEVEEEYCIGTIEEALKAVMEKSNVEESSSSG-- 345

Query: 238 RSKRQR 239
            +KRQR
Sbjct: 346 NAKRQR 349

[Close]
BLAST of Csa6G011720 vs. Swiss-Prot
Match: BH032_ARATH (Transcription factor AIG1 OS=Arabidopsis thaliana GN=BHLH32 PE=1 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 9.2e-29
Identity = 60/139 (43.17%), Postives = 96/139 (69.06%), Query Frame = 1 

Query: 58  IVEDRAASASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLGSAIDQVKDLKRK 117
           +++ +A +ASKSHS+AE+RRR+RIN  LA LR ++P + K DKA+LL   I  +K+LKR+
Sbjct: 124 VMDAKALAASKSHSEAERRRRERINTHLAKLRSILPNTTKTDKASLLAEVIQHMKELKRQ 183

Query: 118 AMEASKNMTVPTDMDEVTIDSTVVEDNSRNNIAIKVSVSCDDRPELFTELIQVIKGLKLT 177
             + +    VPT+ D++T+DS+   ++   N+ I+ S  C DR +L  ++I  +K L+L 
Sbjct: 184 TSQITDTYQVPTECDDLTVDSSY--NDEEGNLVIRASFCCQDRTDLMHDVINALKSLRLR 243

Query: 178 TIRADMASVGGRIKSILIL 197
           T++A++A+VGGR+K+IL L
Sbjct: 244 TLKAEIATVGGRVKNILFL 260

[Close]
BLAST of Csa6G011720 vs. Swiss-Prot
Match: BH107_ARATH (Putative transcription factor bHLH107 OS=Arabidopsis thaliana GN=BHLH107 PE=2 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 3.9e-27
Identity = 70/188 (37.23%), Postives = 119/188 (63.30%), Query Frame = 1 

Query: 41  SSSNEFFPSFSTPSEGIIVEDRAASASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDK 100
           SS++    S S P    + ED+A ++ ++H +AE++RR RIN+ L  LRKL+  + K DK
Sbjct: 21  SSTSTTVTSSSDPF-ATVYEDKALASLRNHKEAERKRRARINSHLNKLRKLLSCNSKTDK 80

Query: 101 AALLGSAIDQVKDLKRKAMEASKNMTVPTDMDEVTIDSTVVEDNSRNN---IAIKVSVSC 160
           + LL   + +VK+LK++ +E +   T+P++ DE+++ +  +ED SR +   I  KVS  C
Sbjct: 81  STLLAKVVQRVKELKQQTLEITDE-TIPSETDEISVLN--IEDCSRGDDRRIIFKVSFCC 140

Query: 161 DDRPELFTELIQVIKGLKLTTIRADMASVGGRIKSILIL-CNKDGEKSVCLNTVQQSLKL 220
           +DRPEL  +L++ +K L++ T+ ADM +VGGR +++L++  +K+      +N +Q +LK 
Sbjct: 141 EDRPELLKDLMETLKSLQMETLFADMTTVGGRTRNVLVVAADKEHHGVQSVNFLQNALKS 200

Query: 221 VLSRMSSS 225
           +L R S S
Sbjct: 201 LLERSSKS 204

[Close]
BLAST of Csa6G011720 vs. Swiss-Prot
Match: BH106_ARATH (Transcription factor bHLH106 OS=Arabidopsis thaliana GN=BHLH106 PE=2 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.6e-25
Identity = 66/205 (32.20%), Postives = 125/205 (60.98%), Query Frame = 1 

Query: 41  SSSNEFFPSFSTPSEGIIVEDRAASASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDK 100
           SS++ ++P   +     + +DRA +A ++H +AE+RRR+RIN+ L  LR ++  + K DK
Sbjct: 42  SSTSSYYPLAISGIGETMAQDRALAALRNHKEAERRRRERINSHLNKLRNVLSCNSKTDK 101

Query: 101 AALLGSAIDQVKDLKRKAMEASKN--MTVPTDMDEVTIDSTVVEDNSRNNIAIKVSVSCD 160
           A LL   + +V++LK++ +E S +    +P++ DE+++     + ++  +I  K S+ C+
Sbjct: 102 ATLLAKVVQRVRELKQQTLETSDSDQTLLPSETDEISV-LHFGDYSNDGHIIFKASLCCE 161

Query: 161 DRPELFTELIQVIKGLKLTTIRADMASVGGRIKSILIL-CNKDGEKSVCLNTVQQSLKLV 220
           DR +L  +L++++K L + T+RA+M ++GGR +S+L++  +K+      ++ +Q +LK +
Sbjct: 162 DRSDLLPDLMEILKSLNMKTLRAEMVTIGGRTRSVLVVAADKEMHGVESVHFLQNALKSL 221

Query: 221 LSRMSSS----STASTYRIRSKRQR 239
           L R S S    S+      RSKR+R
Sbjct: 222 LERSSKSLMERSSGGGGGERSKRRR 245

[Close]
BLAST of Csa6G011720 vs. TrEMBL
Match: A0A0A0KDD1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G011720 PE=4 SV=1)

HSP 1 Score: 481.1 bits (1237), Expect = 8.1e-133
Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 1 

Query: 1   MEDSNWDRSTKPEGLNFDHCNPNSSQEASLLLPWMINPQFSSSNEFFPSFSTPSEGIIVE 60
           MEDSNWDRSTKPEGLNFDHCNPNSSQEASLLLPWMINPQFSSSNEFFPSFSTPSEGIIVE
Sbjct: 1   MEDSNWDRSTKPEGLNFDHCNPNSSQEASLLLPWMINPQFSSSNEFFPSFSTPSEGIIVE 60

Query: 61  DRAASASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLGSAIDQVKDLKRKAME 120
           DRAASASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLGSAIDQVKDLKRKAME
Sbjct: 61  DRAASASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLGSAIDQVKDLKRKAME 120

Query: 121 ASKNMTVPTDMDEVTIDSTVVEDNSRNNIAIKVSVSCDDRPELFTELIQVIKGLKLTTIR 180
           ASKNMTVPTDMDEVTIDSTVVEDNSRNNIAIKVSVSCDDRPELFTELIQVIKGLKLTTIR
Sbjct: 121 ASKNMTVPTDMDEVTIDSTVVEDNSRNNIAIKVSVSCDDRPELFTELIQVIKGLKLTTIR 180

Query: 181 ADMASVGGRIKSILILCNKDGEKSVCLNTVQQSLKLVLSRMSSSSTASTYRIRSKRQRFF 240
           ADMASVGGRIKSILILCNKDGEKSVCLNTVQQSLKLVLSRMSSSSTASTYRIRSKRQRFF
Sbjct: 181 ADMASVGGRIKSILILCNKDGEKSVCLNTVQQSLKLVLSRMSSSSTASTYRIRSKRQRFF 240

Query: 241 LPSQYSK 248
           LPSQYSK
Sbjct: 241 LPSQYSK 247

[Close]
BLAST of Csa6G011720 vs. TrEMBL
Match: M5XLV0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010134mg PE=4 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 1.4e-71
Identity = 158/241 (65.56%), Postives = 186/241 (77.18%), Query Frame = 1 

Query: 24  SSQEASLLLPWMINPQFSSSNEF----FP-SFSTPSEGIIVEDRAASASKSHSQAEKRRR 83
           S++ +S  LPW   P  SSS +F    FP S+S  +EG   EDRAA+ASKSHSQAEKRRR
Sbjct: 23  SNESSSFPLPWP--PHASSSTQFQFCGFPNSWSATAEGADEEDRAATASKSHSQAEKRRR 82

Query: 84  DRINAQLATLRKLIPKSDKMDKAALLGSAIDQVKDLKRKAMEASKNMTVPTDMDEVTIDS 143
           DRINAQLATLRKLIPKSDKMDKAALLGS ID VKDLKRKAME SK   VPT+MDE+TIDS
Sbjct: 83  DRINAQLATLRKLIPKSDKMDKAALLGSVIDHVKDLKRKAMEVSKAFMVPTEMDEITIDS 142

Query: 144 TVVE------------DNSRNNIAIKVSVSCDDRPELFTELIQVIKGLKLTTIRADMASV 203
              +            + SR +I I+ SV CDDRPELF+ELIQV+KGLKLT +RADMASV
Sbjct: 143 DPAQAAANSGSNNINMNKSRCSIVIRASVCCDDRPELFSELIQVLKGLKLTAVRADMASV 202

Query: 204 GGRIKSILILCNKDGE--KSVCLNTVQQSLKLVLSRMSSSSTASTYRIRSKRQRFFLPSQ 246
           GGRIKS+L+LC KDGE  +++C++T++QSLKLVLS++ +SS A   RIRSKRQRFFLP Q
Sbjct: 203 GGRIKSVLVLC-KDGEEDEALCISTLKQSLKLVLSKICASSMAPNCRIRSKRQRFFLPFQ 260

[Close]
BLAST of Csa6G011720 vs. TrEMBL
Match: A0A0U2RKE7_9ROSA (BHLH transcription factor OS=Prunus pseudocerasus PE=2 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 3.0e-71
Identity = 155/240 (64.58%), Postives = 185/240 (77.08%), Query Frame = 1 

Query: 24  SSQEASLLLPWMINPQFSSSNEF----FP-SFSTPSEGIIVEDRAASASKSHSQAEKRRR 83
           S++ +S  LPW   P  SSS +F    FP S+S  +EG   EDRAASASKSHSQAEKRRR
Sbjct: 37  SNESSSFPLPWP--PHASSSTQFQFCGFPNSWSATAEGADEEDRAASASKSHSQAEKRRR 96

Query: 84  DRINAQLATLRKLIPKSDKMDKAALLGSAIDQVKDLKRKAMEASKNMTVPTDMDEVTIDS 143
           DRINAQLATLRKLIPKSDKMDKAALLGS ID VKDLKRKAME SK   VPT+MDE+TIDS
Sbjct: 97  DRINAQLATLRKLIPKSDKMDKAALLGSVIDHVKDLKRKAMEVSKAFMVPTEMDEITIDS 156

Query: 144 TVVE------------DNSRNNIAIKVSVSCDDRPELFTELIQVIKGLKLTTIRADMASV 203
              +            + SR +I I+ SV CDDRPELF+ELIQV+KGLKLT +RADMASV
Sbjct: 157 DPAQAAANSSSNNINMNKSRCSIVIRASVCCDDRPELFSELIQVLKGLKLTAVRADMASV 216

Query: 204 GGRIKSILILC-NKDGEKSVCLNTVQQSLKLVLSRMSSSSTASTYRIRSKRQRFFLPSQY 246
           GGRIKS+L+LC + + ++++C++T++QSLKLVLS++ +SS A   RIRSKRQRFFLP QY
Sbjct: 217 GGRIKSVLVLCKDSEEDEALCISTLKQSLKLVLSKICASSMAPNCRIRSKRQRFFLPFQY 274

[Close]
BLAST of Csa6G011720 vs. TrEMBL
Match: D7T4M2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0067g01350 PE=4 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 5.2e-71
Identity = 151/232 (65.09%), Postives = 184/232 (79.31%), Query Frame = 1 

Query: 27  EASLLLPWMINPQFSSSNEF--FPSFSTPSEGIIVEDRA----ASASKSHSQAEKRRRDR 86
           +A+ +LPW+  P  S+S +F  FPS+S P E +  EDR+    A+ASKSHSQAEKRRRDR
Sbjct: 64  DAAPVLPWLPPPHVSASFQFHGFPSWSLPVEKMATEDRSDERTATASKSHSQAEKRRRDR 123

Query: 87  INAQLATLRKLIPKSDKMDKAALLGSAIDQVKDLKRKAMEASKNMTVPTDMDEVTIDST- 146
           INAQLATLRKLIPKS+KMDKAALLGS ID VKDLKR+AME S   TVPT++DEVT+D   
Sbjct: 124 INAQLATLRKLIPKSEKMDKAALLGSVIDHVKDLKRQAMEVSDVFTVPTEVDEVTVDCEF 183

Query: 147 ---VVEDNS---RNNIAIKVSVSCDDRPELFTELIQVIKGLKLTTIRADMASVGGRIKSI 206
              +V +N+     NI IK SV C+DRPELF+ELI+ ++GLKLTTIRADMAS+ GR KSI
Sbjct: 184 DQGLVPNNTIKTPENIFIKASVCCEDRPELFSELIRALQGLKLTTIRADMASLSGRTKSI 243

Query: 207 LILCNKDGEKSVCLNTVQQSLKLVLSRMSSSSTASTYRIRSKRQRFFLPSQY 246
           L+LC+KD   SVC++T++QSLK+VLSR+ SSSTAS YRI SKRQRFFLPS +
Sbjct: 244 LVLCSKDDSNSVCISTLKQSLKVVLSRIVSSSTASNYRITSKRQRFFLPSNF 295

[Close]
BLAST of Csa6G011720 vs. TrEMBL
Match: V7D1Z3_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G244500g PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 3.7e-69
Identity = 152/253 (60.08%), Postives = 183/253 (72.33%), Query Frame = 1 

Query: 3   DSNWDRSTKPEGLNFDHCNPNSSQEASLLLPWMINPQFSSSNEF----FPSFSTPSEGII 62
           DS W   T     ++  C+ +SS   S  +P  I P  + S       F S+  P EG  
Sbjct: 26  DSGWHMGT-----SWAQCSDHSS---SFAVPTQILPHVTDSASLQFGEFHSWPLPIEGA- 85

Query: 63  VEDRAASASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLGSAIDQVKDLKRKA 122
            E+RA SASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLGS ID VKDLKRKA
Sbjct: 86  AEERAMSASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLGSVIDHVKDLKRKA 145

Query: 123 MEASKNMTVPTDMDEVTIDSTVVEDNS-------RNNIAIKVSVSCDDRPELFTELIQVI 182
           M+ S+  TVPT++DEV+ID   V+D S       + NI IK SV CDDRPELF ELIQV+
Sbjct: 146 MDVSRAFTVPTEIDEVSIDCDHVQDESCTKVNKLKENIVIKASVCCDDRPELFPELIQVL 205

Query: 183 KGLKLTTIRADMASVGGRIKSILILCNKDGEKSVCLNTVQQSLKLVLSRMSSSSTASTYR 242
           KGL+LT ++AD+ASVGGRIKSIL+LC+KDGE+ VCL T++QSLK  +++++SSS  S   
Sbjct: 206 KGLRLTAVKADIASVGGRIKSILVLCSKDGEEGVCLTTLKQSLKSAVTKIASSSMTSNCP 265

Query: 243 IRSKRQRFFLPSQ 245
            RSKRQRFFLPS+
Sbjct: 266 TRSKRQRFFLPSR 269

[Close]
BLAST of Csa6G011720 vs. TAIR10
Match: AT2G40200.1 (AT2G40200.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 171.0 bits (432), Expect = 9.1e-43
Identity = 108/254 (42.52%), Postives = 157/254 (61.81%), Query Frame = 1 

Query: 2   EDSNWDRSTKPEGLNFDHCNPNSSQEASLLLPWMINPQFSSSNEFFPSFSTPSEGIIVE- 61
           + S W  ST P  +++   + +S  + +       N  FSSS+ F  +F  P++  +   
Sbjct: 6   DSSKWSDSTTPYMVSWSLQSESSDSDWN-----RFNLGFSSSS-FGGNF--PADDCVGGI 65

Query: 62  DRAASASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLGSAIDQVKDLKRKAME 121
           ++A S S+SH  AEKRRRDRIN+ L  LRKL+P SDK+DKAALL + I+QVK+LK+KA E
Sbjct: 66  EKAESLSRSHRLAEKRRRDRINSHLTALRKLVPNSDKLDKAALLATVIEQVKELKQKAAE 125

Query: 122 ASKNMTVPTDMDEVTIDSTVVED--NSRNNIAIKVSVSCDDRPELFTELIQVIKGLKLTT 181
           +     +PT+ DEVT+    + D  ++ N I  K S  C+D+PE  +E+I+V+  L+L T
Sbjct: 126 SPIFQDLPTEADEVTVQPETISDFESNTNTIIFKASFCCEDQPEAISEIIRVLTKLQLET 185

Query: 182 IRADMASVGGRIKSILIL----CNKDGEKSVCLNTVQQSLKLVLSRMSSSS--TASTYRI 241
           I+A++ SVGGR++   IL    CN+    +     ++QSL   L+R++SSS  T+S  RI
Sbjct: 186 IQAEIISVGGRMRINFILKDSNCNETTNIAASAKALKQSLCSALNRITSSSTTTSSVCRI 245

Query: 242 RSKRQRFFLPSQYS 247
           RSKRQR+FL S YS
Sbjct: 246 RSKRQRWFLSSHYS 251

[Close]
BLAST of Csa6G011720 vs. TAIR10
Match: AT1G68810.1 (AT1G68810.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 144.4 bits (363), Expect = 9.1e-35
Identity = 71/186 (38.17%), Postives = 120/186 (64.52%), Query Frame = 1 

Query: 58  IVEDRAASASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLGSAIDQVKDLKRK 117
           I++ +A +ASKSHS+AE+RRR+RIN  LA LR ++P + K DKA+LL   I  VK+LKR+
Sbjct: 166 IMDAKALAASKSHSEAERRRRERINNHLAKLRSILPNTTKTDKASLLAEVIQHVKELKRE 225

Query: 118 AMEASKNMTVPTDMDEVTIDSTVVEDNSRNNIAIKVSVSCDDRPELFTELIQVIKGLKLT 177
               S+   VPT+ DE+T+  T  E+       IK S+ C+DR +L  ++I+ +K ++L 
Sbjct: 226 TSVISETNLVPTESDELTVAFTEEEETGDGRFVIKASLCCEDRSDLLPDMIKTLKAMRLK 285

Query: 178 TIRADMASVGGRIKSILILCNKDG-----EKSVCLNTVQQSLKLVLSRMSSSSTASTYRI 237
           T++A++ +VGGR+K++L +  ++      E+  C+ T++++LK V+ + +   ++S+   
Sbjct: 286 TLKAEITTVGGRVKNVLFVTGEESSGEEVEEEYCIGTIEEALKAVMEKSNVEESSSSG-- 345

Query: 238 RSKRQR 239
            +KRQR
Sbjct: 346 NAKRQR 349

[Close]
BLAST of Csa6G011720 vs. TAIR10
Match: AT3G25710.1 (AT3G25710.1 basic helix-loop-helix 32)

HSP 1 Score: 128.6 bits (322), Expect = 5.2e-30
Identity = 60/139 (43.17%), Postives = 96/139 (69.06%), Query Frame = 1 

Query: 58  IVEDRAASASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLGSAIDQVKDLKRK 117
           +++ +A +ASKSHS+AE+RRR+RIN  LA LR ++P + K DKA+LL   I  +K+LKR+
Sbjct: 124 VMDAKALAASKSHSEAERRRRERINTHLAKLRSILPNTTKTDKASLLAEVIQHMKELKRQ 183

Query: 118 AMEASKNMTVPTDMDEVTIDSTVVEDNSRNNIAIKVSVSCDDRPELFTELIQVIKGLKLT 177
             + +    VPT+ D++T+DS+   ++   N+ I+ S  C DR +L  ++I  +K L+L 
Sbjct: 184 TSQITDTYQVPTECDDLTVDSSY--NDEEGNLVIRASFCCQDRTDLMHDVINALKSLRLR 243

Query: 178 TIRADMASVGGRIKSILIL 197
           T++A++A+VGGR+K+IL L
Sbjct: 244 TLKAEIATVGGRVKNILFL 260

[Close]
BLAST of Csa6G011720 vs. TAIR10
Match: AT3G56770.1 (AT3G56770.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 123.2 bits (308), Expect = 2.2e-28
Identity = 70/188 (37.23%), Postives = 119/188 (63.30%), Query Frame = 1 

Query: 41  SSSNEFFPSFSTPSEGIIVEDRAASASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDK 100
           SS++    S S P    + ED+A ++ ++H +AE++RR RIN+ L  LRKL+  + K DK
Sbjct: 21  SSTSTTVTSSSDPF-ATVYEDKALASLRNHKEAERKRRARINSHLNKLRKLLSCNSKTDK 80

Query: 101 AALLGSAIDQVKDLKRKAMEASKNMTVPTDMDEVTIDSTVVEDNSRNN---IAIKVSVSC 160
           + LL   + +VK+LK++ +E +   T+P++ DE+++ +  +ED SR +   I  KVS  C
Sbjct: 81  STLLAKVVQRVKELKQQTLEITDE-TIPSETDEISVLN--IEDCSRGDDRRIIFKVSFCC 140

Query: 161 DDRPELFTELIQVIKGLKLTTIRADMASVGGRIKSILIL-CNKDGEKSVCLNTVQQSLKL 220
           +DRPEL  +L++ +K L++ T+ ADM +VGGR +++L++  +K+      +N +Q +LK 
Sbjct: 141 EDRPELLKDLMETLKSLQMETLFADMTTVGGRTRNVLVVAADKEHHGVQSVNFLQNALKS 200

Query: 221 VLSRMSSS 225
           +L R S S
Sbjct: 201 LLERSSKS 204

[Close]
BLAST of Csa6G011720 vs. TAIR10
Match: AT2G41130.1 (AT2G41130.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 117.9 bits (294), Expect = 9.2e-27
Identity = 66/205 (32.20%), Postives = 125/205 (60.98%), Query Frame = 1 

Query: 41  SSSNEFFPSFSTPSEGIIVEDRAASASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDK 100
           SS++ ++P   +     + +DRA +A ++H +AE+RRR+RIN+ L  LR ++  + K DK
Sbjct: 42  SSTSSYYPLAISGIGETMAQDRALAALRNHKEAERRRRERINSHLNKLRNVLSCNSKTDK 101

Query: 101 AALLGSAIDQVKDLKRKAMEASKN--MTVPTDMDEVTIDSTVVEDNSRNNIAIKVSVSCD 160
           A LL   + +V++LK++ +E S +    +P++ DE+++     + ++  +I  K S+ C+
Sbjct: 102 ATLLAKVVQRVRELKQQTLETSDSDQTLLPSETDEISV-LHFGDYSNDGHIIFKASLCCE 161

Query: 161 DRPELFTELIQVIKGLKLTTIRADMASVGGRIKSILIL-CNKDGEKSVCLNTVQQSLKLV 220
           DR +L  +L++++K L + T+RA+M ++GGR +S+L++  +K+      ++ +Q +LK +
Sbjct: 162 DRSDLLPDLMEILKSLNMKTLRAEMVTIGGRTRSVLVVAADKEMHGVESVHFLQNALKSL 221

Query: 221 LSRMSSS----STASTYRIRSKRQR 239
           L R S S    S+      RSKR+R
Sbjct: 222 LERSSKSLMERSSGGGGGERSKRRR 245

[Close]
BLAST of Csa6G011720 vs. NCBI nr
Match: gi|778709547|ref|XP_004138418.2| (PREDICTED: transcription factor bHLH51 [Cucumis sativus])

HSP 1 Score: 481.1 bits (1237), Expect = 1.2e-132
Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 1 

Query: 1   MEDSNWDRSTKPEGLNFDHCNPNSSQEASLLLPWMINPQFSSSNEFFPSFSTPSEGIIVE 60
           MEDSNWDRSTKPEGLNFDHCNPNSSQEASLLLPWMINPQFSSSNEFFPSFSTPSEGIIVE
Sbjct: 1   MEDSNWDRSTKPEGLNFDHCNPNSSQEASLLLPWMINPQFSSSNEFFPSFSTPSEGIIVE 60

Query: 61  DRAASASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLGSAIDQVKDLKRKAME 120
           DRAASASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLGSAIDQVKDLKRKAME
Sbjct: 61  DRAASASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLGSAIDQVKDLKRKAME 120

Query: 121 ASKNMTVPTDMDEVTIDSTVVEDNSRNNIAIKVSVSCDDRPELFTELIQVIKGLKLTTIR 180
           ASKNMTVPTDMDEVTIDSTVVEDNSRNNIAIKVSVSCDDRPELFTELIQVIKGLKLTTIR
Sbjct: 121 ASKNMTVPTDMDEVTIDSTVVEDNSRNNIAIKVSVSCDDRPELFTELIQVIKGLKLTTIR 180

Query: 181 ADMASVGGRIKSILILCNKDGEKSVCLNTVQQSLKLVLSRMSSSSTASTYRIRSKRQRFF 240
           ADMASVGGRIKSILILCNKDGEKSVCLNTVQQSLKLVLSRMSSSSTASTYRIRSKRQRFF
Sbjct: 181 ADMASVGGRIKSILILCNKDGEKSVCLNTVQQSLKLVLSRMSSSSTASTYRIRSKRQRFF 240

Query: 241 LPSQYSK 248
           LPSQYSK
Sbjct: 241 LPSQYSK 247

[Close]
BLAST of Csa6G011720 vs. NCBI nr
Match: gi|659081714|ref|XP_008441476.1| (PREDICTED: transcription factor bHLH51 [Cucumis melo])

HSP 1 Score: 466.1 bits (1198), Expect = 3.9e-128
Identity = 239/246 (97.15%), Postives = 242/246 (98.37%), Query Frame = 1 

Query: 1   MEDSNWDRSTKPEGLNFDHCNPNSSQEASLLLPWMINPQFSSSNEFFPSFSTPSEGIIVE 60
           MED+NWDRSTKPEGLNFDHCNPNSS EASLL PWMINPQFSSSNEFFPSFS+PSEGIIVE
Sbjct: 1   MEDNNWDRSTKPEGLNFDHCNPNSSHEASLLHPWMINPQFSSSNEFFPSFSSPSEGIIVE 60

Query: 61  DRAASASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLGSAIDQVKDLKRKAME 120
           DRAASASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLGSAIDQVKDLKRKAME
Sbjct: 61  DRAASASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLGSAIDQVKDLKRKAME 120

Query: 121 ASKNMTVPTDMDEVTIDSTVVEDNSRNNIAIKVSVSCDDRPELFTELIQVIKGLKLTTIR 180
           ASKNMTVPTDMDEVTIDST+VEDNS NNIAIKVSVSCDDRPEL TELIQVIKGLKLTTIR
Sbjct: 121 ASKNMTVPTDMDEVTIDSTMVEDNSSNNIAIKVSVSCDDRPELLTELIQVIKGLKLTTIR 180

Query: 181 ADMASVGGRIKSILILCNKDGEKSVCLNTVQQSLKLVLSRMSSSSTASTYRIRSKRQRFF 240
           ADMASVGGRIKSILILCNKDGEKSVCLNTVQQSLKLVLSRMSSSSTASTYRIRSKRQRFF
Sbjct: 181 ADMASVGGRIKSILILCNKDGEKSVCLNTVQQSLKLVLSRMSSSSTASTYRIRSKRQRFF 240

Query: 241 LPSQYS 247
           LPSQYS
Sbjct: 241 LPSQYS 246

[Close]
BLAST of Csa6G011720 vs. NCBI nr
Match: gi|596015682|ref|XP_007218826.1| (hypothetical protein PRUPE_ppa010134mg [Prunus persica])

HSP 1 Score: 277.7 bits (709), Expect = 2.0e-71
Identity = 158/241 (65.56%), Postives = 186/241 (77.18%), Query Frame = 1 

Query: 24  SSQEASLLLPWMINPQFSSSNEF----FP-SFSTPSEGIIVEDRAASASKSHSQAEKRRR 83
           S++ +S  LPW   P  SSS +F    FP S+S  +EG   EDRAA+ASKSHSQAEKRRR
Sbjct: 23  SNESSSFPLPWP--PHASSSTQFQFCGFPNSWSATAEGADEEDRAATASKSHSQAEKRRR 82

Query: 84  DRINAQLATLRKLIPKSDKMDKAALLGSAIDQVKDLKRKAMEASKNMTVPTDMDEVTIDS 143
           DRINAQLATLRKLIPKSDKMDKAALLGS ID VKDLKRKAME SK   VPT+MDE+TIDS
Sbjct: 83  DRINAQLATLRKLIPKSDKMDKAALLGSVIDHVKDLKRKAMEVSKAFMVPTEMDEITIDS 142

Query: 144 TVVE------------DNSRNNIAIKVSVSCDDRPELFTELIQVIKGLKLTTIRADMASV 203
              +            + SR +I I+ SV CDDRPELF+ELIQV+KGLKLT +RADMASV
Sbjct: 143 DPAQAAANSGSNNINMNKSRCSIVIRASVCCDDRPELFSELIQVLKGLKLTAVRADMASV 202

Query: 204 GGRIKSILILCNKDGE--KSVCLNTVQQSLKLVLSRMSSSSTASTYRIRSKRQRFFLPSQ 246
           GGRIKS+L+LC KDGE  +++C++T++QSLKLVLS++ +SS A   RIRSKRQRFFLP Q
Sbjct: 203 GGRIKSVLVLC-KDGEEDEALCISTLKQSLKLVLSKICASSMAPNCRIRSKRQRFFLPFQ 260

[Close]
BLAST of Csa6G011720 vs. NCBI nr
Match: gi|645256064|ref|XP_008233781.1| (PREDICTED: transcription factor bHLH51 [Prunus mume])

HSP 1 Score: 277.3 bits (708), Expect = 2.6e-71
Identity = 157/241 (65.15%), Postives = 186/241 (77.18%), Query Frame = 1 

Query: 24  SSQEASLLLPWMINPQFSSSNEF----FP-SFSTPSEGIIVEDRAASASKSHSQAEKRRR 83
           S++ +S  LPW   P  SSS +F    FP S+S  +EG   EDRAA+ASKSHSQAEKRRR
Sbjct: 37  SNESSSFPLPWP--PHASSSTQFQFCGFPNSWSAAAEGADEEDRAATASKSHSQAEKRRR 96

Query: 84  DRINAQLATLRKLIPKSDKMDKAALLGSAIDQVKDLKRKAMEASKNMTVPTDMDEVTIDS 143
           DRINAQLATLRKLIPKSDKMDKAALLGS ID VKDLKRKAME SK   VPT+MDE+TIDS
Sbjct: 97  DRINAQLATLRKLIPKSDKMDKAALLGSVIDHVKDLKRKAMEVSKAFMVPTEMDEITIDS 156

Query: 144 TVVE------------DNSRNNIAIKVSVSCDDRPELFTELIQVIKGLKLTTIRADMASV 203
              +            + SR +I I+ SV CDDRPELF+ELIQV+KGLKLT +RADMASV
Sbjct: 157 DPAQAAANSSSNNINMNKSRCSIVIRASVCCDDRPELFSELIQVLKGLKLTAVRADMASV 216

Query: 204 GGRIKSILILCNKDGE--KSVCLNTVQQSLKLVLSRMSSSSTASTYRIRSKRQRFFLPSQ 246
           GGRIKS+L+LC KDGE  +++C++T++QSLKL+LS++ +SS A   RIRSKRQRFFLP Q
Sbjct: 217 GGRIKSVLVLC-KDGEEDEALCISTLKQSLKLILSKICASSMAPNCRIRSKRQRFFLPFQ 274

[Close]
BLAST of Csa6G011720 vs. NCBI nr
Match: gi|950804802|gb|ALN42129.1| (bHLH transcription factor [Prunus pseudocerasus])

HSP 1 Score: 276.6 bits (706), Expect = 4.4e-71
Identity = 155/240 (64.58%), Postives = 185/240 (77.08%), Query Frame = 1 

Query: 24  SSQEASLLLPWMINPQFSSSNEF----FP-SFSTPSEGIIVEDRAASASKSHSQAEKRRR 83
           S++ +S  LPW   P  SSS +F    FP S+S  +EG   EDRAASASKSHSQAEKRRR
Sbjct: 37  SNESSSFPLPWP--PHASSSTQFQFCGFPNSWSATAEGADEEDRAASASKSHSQAEKRRR 96

Query: 84  DRINAQLATLRKLIPKSDKMDKAALLGSAIDQVKDLKRKAMEASKNMTVPTDMDEVTIDS 143
           DRINAQLATLRKLIPKSDKMDKAALLGS ID VKDLKRKAME SK   VPT+MDE+TIDS
Sbjct: 97  DRINAQLATLRKLIPKSDKMDKAALLGSVIDHVKDLKRKAMEVSKAFMVPTEMDEITIDS 156

Query: 144 TVVE------------DNSRNNIAIKVSVSCDDRPELFTELIQVIKGLKLTTIRADMASV 203
              +            + SR +I I+ SV CDDRPELF+ELIQV+KGLKLT +RADMASV
Sbjct: 157 DPAQAAANSSSNNINMNKSRCSIVIRASVCCDDRPELFSELIQVLKGLKLTAVRADMASV 216

Query: 204 GGRIKSILILC-NKDGEKSVCLNTVQQSLKLVLSRMSSSSTASTYRIRSKRQRFFLPSQY 246
           GGRIKS+L+LC + + ++++C++T++QSLKLVLS++ +SS A   RIRSKRQRFFLP QY
Sbjct: 217 GGRIKSVLVLCKDSEEDEALCISTLKQSLKLVLSKICASSMAPNCRIRSKRQRFFLPFQY 274

The following BLAST results are available for this feature:
BLAST of Csa6G011720 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BH051_ARATH1.6e-4142.52Transcription factor bHLH51 OS=Arabidopsis thaliana GN=BHLH51 PE=2 SV=1[more]
BH030_ARATH1.6e-3338.17Transcription factor bHLH30 OS=Arabidopsis thaliana GN=BHLH30 PE=1 SV=1[more]
BH032_ARATH9.2e-2943.17Transcription factor AIG1 OS=Arabidopsis thaliana GN=BHLH32 PE=1 SV=1[more]
BH107_ARATH3.9e-2737.23Putative transcription factor bHLH107 OS=Arabidopsis thaliana GN=BHLH107 PE=2 SV... [more]
BH106_ARATH1.6e-2532.20Transcription factor bHLH106 OS=Arabidopsis thaliana GN=BHLH106 PE=2 SV=1[more]
BLAST of Csa6G011720 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KDD1_CUCSA8.1e-133100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G011720 PE=4 SV=1[more]
M5XLV0_PRUPE1.4e-7165.56Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010134mg PE=4 SV=1[more]
A0A0U2RKE7_9ROSA3.0e-7164.58BHLH transcription factor OS=Prunus pseudocerasus PE=2 SV=1[more]
D7T4M2_VITVI5.2e-7165.09Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0067g01350 PE=4 SV=... [more]
V7D1Z3_PHAVU3.7e-6960.08Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G244500g PE=4 SV=1[more]
BLAST of Csa6G011720 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G40200.19.1e-4342.52 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT1G68810.19.1e-3538.17 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT3G25710.15.2e-3043.17 basic helix-loop-helix 32[more]
AT3G56770.12.2e-2837.23 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT2G41130.19.2e-2732.20 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
BLAST of Csa6G011720 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778709547|ref|XP_004138418.2|1.2e-132100.00PREDICTED: transcription factor bHLH51 [Cucumis sativus][more]
gi|659081714|ref|XP_008441476.1|3.9e-12897.15PREDICTED: transcription factor bHLH51 [Cucumis melo][more]
gi|596015682|ref|XP_007218826.1|2.0e-7165.56hypothetical protein PRUPE_ppa010134mg [Prunus persica][more]
gi|645256064|ref|XP_008233781.1|2.6e-7165.15PREDICTED: transcription factor bHLH51 [Prunus mume][more]
gi|950804802|gb|ALN42129.1|4.4e-7164.58bHLH transcription factor [Prunus pseudocerasus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR011598bHLH_dom
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0008150 biological_process
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005575 cellular_component
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa6G011720.1Csa6G011720.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainGENE3DG3DSA:4.10.280.10coord: 68..117
score: 5.5
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPFAMPF00010HLHcoord: 68..114
score: 3.5
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSMARTSM00353finuluscoord: 71..120
score: 1.8
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROFILEPS50888BHLHcoord: 65..114
score: 15
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainunknownSSF47459HLH, helix-loop-helix DNA-binding domaincoord: 66..118
score: 2.22
NoneNo IPR availableunknownCoilCoilcoord: 104..124
scor
NoneNo IPR availablePANTHERPTHR12565STEROL REGULATORY ELEMENT-BINDING PROTEINcoord: 48..246
score: 4.3
NoneNo IPR availablePANTHERPTHR12565:SF181SUBFAMILY NOT NAMEDcoord: 48..246
score: 4.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa6G011720Cla006599Watermelon (97103) v1cuwmB533
Csa6G011720MELO3C008307Melon (DHL92) v3.5.1cumeB467
Csa6G011720ClCG11G006060Watermelon (Charleston Gray)cuwcgB429
Csa6G011720Lsi03G003000Bottle gourd (USVL1VR-Ls)culsiB444
Csa6G011720MELO3C008307.2Melon (DHL92) v3.6.1cumedB448
Csa6G011720Cla97C11G212990Watermelon (97103) v2cuwmbB423
Csa6G011720Bhi04G001880Wax gourdcuwgoB586
Csa6G011720CSPI06G01770Wild cucumber (PI 183967)cpicuB314
Csa6G011720Cucsa.136730Cucumber (Gy14) v1cgycuB195
Csa6G011720CmaCh04G028970Cucurbita maxima (Rimu)cmacuB768
Csa6G011720CmaCh15G001390Cucurbita maxima (Rimu)cmacuB309
Csa6G011720CmoCh15G001550Cucurbita moschata (Rifu)cmocuB296
Csa6G011720CmoCh04G030200Cucurbita moschata (Rifu)cmocuB759
Csa6G011720Cp4.1LG01g21720Cucurbita pepo (Zucchini)cpecuB460
Csa6G011720Cp4.1LG13g07410Cucurbita pepo (Zucchini)cpecuB198
Csa6G011720CsGy6G001860Cucumber (Gy14) v2cgybcuB282
Csa6G011720Carg05970Silver-seed gourdcarcuB0023
Csa6G011720Carg02130Silver-seed gourdcarcuB0297
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa6G011720Cucumber (Chinese Long) v2cucuB144
Csa6G011720Cucumber (Chinese Long) v2cucuB163
Csa6G011720Cucurbita maxima (Rimu)cmacuB682
Csa6G011720Cucurbita maxima (Rimu)cmacuB772
Csa6G011720Cucurbita maxima (Rimu)cmacuB774
Csa6G011720Cucurbita maxima (Rimu)cmacuB876
Csa6G011720Cucurbita moschata (Rifu)cmocuB671
Csa6G011720Cucurbita moschata (Rifu)cmocuB764
Csa6G011720Melon (DHL92) v3.5.1cumeB459
Csa6G011720Melon (DHL92) v3.5.1cumeB506
Csa6G011720Watermelon (Charleston Gray)cuwcgB467
Csa6G011720Watermelon (Charleston Gray)cuwcgB490
Csa6G011720Watermelon (97103) v1cuwmB482
Csa6G011720Watermelon (97103) v1cuwmB508
Csa6G011720Cucurbita pepo (Zucchini)cpecuB086
Csa6G011720Cucurbita pepo (Zucchini)cpecuB465
Csa6G011720Bottle gourd (USVL1VR-Ls)culsiB432
Csa6G011720Bottle gourd (USVL1VR-Ls)culsiB458
Csa6G011720Cucumber (Gy14) v2cgybcuB184
Csa6G011720Melon (DHL92) v3.6.1cumedB491
Csa6G011720Silver-seed gourdcarcuB0586
Csa6G011720Silver-seed gourdcarcuB0697
Csa6G011720Watermelon (97103) v2cuwmbB458
Csa6G011720Watermelon (97103) v2cuwmbB482