Csa5G609810 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa5G609810
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr5 : 23683435 .. 23683919 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCATTTTCATCTTCATCTTCGTCTTCGTCTTCACCACAAAATGCAGTCTAAAAGGCCACCCATTTTCCAAAAGCTTTCTAATTTCCTCAGAGTTTCAATCTTTATGGCTAAAATGAAAAGACCTATCATCCCAAAGCTCCTTTTCCTCAAGAAATCATCCAGAATGAAGAGTTTTGAACTCCTTCACCACTATAACTATGGGTTTGTTCGAGATTTTGAATTCTCCCCTTCCACCACTCCTCTGTTTCGGTTCAATAACAGAGGCGGCCGTCGTGGCCTCCGTCGCTACGATGTCTGTTCGGTGCTGTTTCCATGTAGATGTATTGTTGGTGGTTCTGGAGGTGAAAAAAAGGAAGGAGATGGAGATTATGGCGTGGAGGAAGCTTTTCCGGAGTCGTTGGATTGGAGTGATGATGATGATTCGATTGATCGGAGGGCTGAGATTTTCATTCAGAAGTTCTATGAGGATATGAAAATGGAGAGGC

mRNA sequence

ATGGGTTTGTTCGAGATTTTGAATTCTCCCCTTCCACCACTCCTCTGTTTCGGTTCAATAACAGAGGCGGCCGTCGTGGCCTCCGTCGCTACGATGTCTGTTCGGTGCTGTTTCCATGTAGATGTATTGTTGGTGGTTCTGGAGGTGAAAAAAAGGAAGGAGATGGAGATTATGGCGTGGAGGAAGCTTTTCCGGAGTCGTTGGATTGGAGTGATGATGATGATTCGATTGATCGGAGGGCTGAGATTTTCATTCAGAAGTTCTATGAGGATATGA

Coding sequence (CDS)

ATGGGTTTGTTCGAGATTTTGAATTCTCCCCTTCCACCACTCCTCTGTTTCGGTTCAATAACAGAGGCGGCCGTCGTGGCCTCCGTCGCTACGATGTCTGTTCGGTGCTGTTTCCATGTAGATGTATTGTTGGTGGTTCTGGAGGTGAAAAAAAGGAAGGAGATGGAGATTATGGCGTGGAGGAAGCTTTTCCGGAGTCGTTGGATTGGAGTGATGATGATGATTCGATTGATCGGAGGGCTGAGATTTTCATTCAGAAGTTCTATGAGGATATGA

Protein sequence

MGLFEILNSPLPPLLCFGSITEAAVVASVATMSVRCCFHVDVLLVVLEVKKRKEMEIMAWRKLFRSRWIGVMMMIRLIGGLRFSFRSSMRI*
Homology
[Close]
BLAST of Csa5G609810 vs. TrEMBL
Match: A0A0A0KR56_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G609810 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.8e-43
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 1 

Query: 1  MGLFEILNSPLPPLLCFGSITEAAVVASVATMSVRCCFHVDVLLVVLEVKKRKEMEIMAW 60
          MGLFEILNSPLPPLLCFGSITEAAVVASVATMSVRCCFHVDVLLVVLEVKKRKEMEIMAW
Sbjct: 1  MGLFEILNSPLPPLLCFGSITEAAVVASVATMSVRCCFHVDVLLVVLEVKKRKEMEIMAW 60

Query: 61 RKLFRSRWIGVMMMIRLIGGLRFSFRSSMRI 92
          RKLFRSRWIGVMMMIRLIGGLRFSFRSSMRI
Sbjct: 61 RKLFRSRWIGVMMMIRLIGGLRFSFRSSMRI 91

[Close]
BLAST of Csa5G609810 vs. NCBI nr
Match: gi|700196918|gb|KGN52095.1| (hypothetical protein Csa_5G609810 [Cucumis sativus])

HSP 1 Score: 181.8 bits (460), Expect = 5.4e-43
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 1 

Query: 1  MGLFEILNSPLPPLLCFGSITEAAVVASVATMSVRCCFHVDVLLVVLEVKKRKEMEIMAW 60
          MGLFEILNSPLPPLLCFGSITEAAVVASVATMSVRCCFHVDVLLVVLEVKKRKEMEIMAW
Sbjct: 1  MGLFEILNSPLPPLLCFGSITEAAVVASVATMSVRCCFHVDVLLVVLEVKKRKEMEIMAW 60

Query: 61 RKLFRSRWIGVMMMIRLIGGLRFSFRSSMRI 92
          RKLFRSRWIGVMMMIRLIGGLRFSFRSSMRI
Sbjct: 61 RKLFRSRWIGVMMMIRLIGGLRFSFRSSMRI 91

The following BLAST results are available for this feature:
BLAST of Csa5G609810 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KR56_CUCSA3.8e-43100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_5G609810 PE=4 SV=1[more]
BLAST of Csa5G609810 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700196918|gb|KGN52095.1|5.4e-43100.00hypothetical protein Csa_5G609810 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa5G609810.1Csa5G609810.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa5G609810Silver-seed gourdcarcuB0626
Csa5G609810Silver-seed gourdcarcuB0811
Csa5G609810Silver-seed gourdcarcuB0857
Csa5G609810Silver-seed gourdcarcuB1066
Csa5G609810Watermelon (97103) v2cuwmbB377
Csa5G609810Watermelon (97103) v2cuwmbB383
Csa5G609810Watermelon (97103) v2cuwmbB390
Csa5G609810Wax gourdcuwgoB482
Csa5G609810Wax gourdcuwgoB495
Csa5G609810Wax gourdcuwgoB512
Csa5G609810Cucumber (Chinese Long) v2cucuB031
Csa5G609810Cucumber (Chinese Long) v2cucuB030
Csa5G609810Cucumber (Gy14) v1cgycuB144
Csa5G609810Cucumber (Gy14) v1cgycuB410
Csa5G609810Cucurbita maxima (Rimu)cmacuB135
Csa5G609810Cucurbita maxima (Rimu)cmacuB295
Csa5G609810Cucurbita maxima (Rimu)cmacuB417
Csa5G609810Cucurbita maxima (Rimu)cmacuB735
Csa5G609810Cucurbita maxima (Rimu)cmacuB748
Csa5G609810Cucurbita moschata (Rifu)cmocuB071
Csa5G609810Cucurbita moschata (Rifu)cmocuB282
Csa5G609810Cucurbita moschata (Rifu)cmocuB406
Csa5G609810Cucurbita moschata (Rifu)cmocuB738
Csa5G609810Cucurbita moschata (Rifu)cmocuB724
Csa5G609810Melon (DHL92) v3.5.1cumeB377
Csa5G609810Melon (DHL92) v3.5.1cumeB392
Csa5G609810Watermelon (Charleston Gray)cuwcgB394
Csa5G609810Watermelon (Charleston Gray)cuwcgB400
Csa5G609810Watermelon (97103) v1cuwmB401
Csa5G609810Watermelon (97103) v1cuwmB425
Csa5G609810Watermelon (97103) v1cuwmB441
Csa5G609810Cucurbita pepo (Zucchini)cpecuB041
Csa5G609810Cucurbita pepo (Zucchini)cpecuB190
Csa5G609810Cucurbita pepo (Zucchini)cpecuB456
Csa5G609810Cucurbita pepo (Zucchini)cpecuB434
Csa5G609810Cucurbita pepo (Zucchini)cpecuB439
Csa5G609810Cucurbita pepo (Zucchini)cpecuB682
Csa5G609810Bottle gourd (USVL1VR-Ls)culsiB346
Csa5G609810Bottle gourd (USVL1VR-Ls)culsiB368
Csa5G609810Bottle gourd (USVL1VR-Ls)culsiB383
Csa5G609810Cucumber (Gy14) v2cgybcuB033
Csa5G609810Cucumber (Gy14) v2cgybcuB223
Csa5G609810Melon (DHL92) v3.6.1cumedB359
Csa5G609810Melon (DHL92) v3.6.1cumedB375