Csa5G605020 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATGGAATAATTATTTTTTCTTTTAAAAAAAAAACGACGTAGTTTGATTCTTCTCGATCTCCATCCTCTCTCTTCCATGATTCGTACCACTCCCACAGATTTTTCTTTGTTTTTTCTGTAAACCCTAGCTCGAATCCTTTTTCATTTTCCTCTTCTTCCGTTGATTTTGATTTCTGGGTGTTCATTTGTTCCGTTTCTTTTCCTTCTTGTAGAAAGGCTAGTGTAGGAAGGTGATCCCCTGTTCTCCTTTCCCATCATAGGAATTGGATTTGGGATTCCCTTCCTGCTCTTTCTTAACCTGCCGGAAAACTGTACGTGAGCTGAGATTTGGGTTTTTGGTTCCTAATGCAATTCCGGCTGCTTTTGGGGTTTAGTATTTGATCTTTTCTAGTTCCTTTTCCAACATGGGTATTGTAATCTCTGATCAAATTTTGGGTACTTTTGTACCAATTGTGGTTTATTGGCTATATTCTGGGCTTTACATTCTTCTTGGCTCATTTGAGAACTACCGGTTACACTCTAAGAAAGATGAGCTGGAGAAGAACTTAGTGTCTAAAAGCACTGTGGTTAGAGGCGTTTTCCTTCAACAGATTATTCAGGCAATCGTTGCAATCCTCTTGTTTAAGGTATGCATTGAATAATCTCCACTAAAGTTCATTAATTTCTATGAGTGTATGCTTTTCATCATACTTTGTGACTTTGTCAACCTTTGTATGAAGTCGGGATCAAATATCAATAGGGTATTAATAGTTGAAAGAGGTGGCAATGAGTTATATGGAAAGTGTAAGAATCACTTGATGTGAATTTTATCTCTGCCCGGTCCCCCTCTCGTGGGTTTGTGGACACTAGATATAGCATTAAGTCTGGACTGTTTGTTGAGAAGTAATTGTACTAGTGATTACTGATCAGTACTGCGAAATTTATTACTGGTTGACTTGCTTGGTTCTTGTTAAATTTTATGAACTATATATTACCAGCATCAGTTGTGGAGTGTTGGACCTTTGTACTTCCTAGTCTTCCAGACCAAGATTGATCAATATATTTTTTTTCTGAAGATTCATTTTGTTTGCGCTGAATCACTTATTTCTTCTGGTTAGGTCACTTTCCTTGAAAAACTTTCATCCGTGATTCTTGAACTACTCTGCTTCAAAATTGTTGTCTCCCCTGCAAAATAAAGAGTTAATAAAGGAGAGAAAAGTAGTATCCCAAAATGTCACTGTATTTTAGTTTTGATTAGTTAGTCGTGTGTATAAACATCTTCTATTGAAAGAACATGTTTTTCCACTGGTTTTTTATGAAACTTTTGTTTGCTTTTTCTTTGGTGTGTGCATCTCAAATGAAAATTAATCCTTGAGTTGTCTCATGGATGCCACCAGATTTACTCTACTGCAACTAGTGGTGAATGGTGCATAAGTCTCAATCACTTTCCCCCCATATGTCTTGGGATTTAGGGGTTAAGGAAAAGTAAGGGACACAATTAATCTAGGTTGATAGGCTGCGCACCTTTTTTTTTATTCCTGGTCTACATCTGAGATTACTCAGCTGTGCTTCAATTGTAACTTTCTACATTGATAGCATCTTTTTTTGGGTTCTGCTGTCCTTAATATGAGTTTCAATAGTGAAGCATATTGGGCCACATTTCTTATATACACGTCTCTGCAGTCTTTTTCAGTGTCTGATTTCCTTCACATATATTTGTTTACTCACCATTCGAGTACTGGCTGTAAATGTCAACTAGCCATTATTCAATATGATTAAGAAACAAAAATTGGTTTGTTCTGTTGAAGTCAGTTTTTGTGATGTGGAAAACCTGCACATTCGTGAAAATGAAGGGATTAAAGAACTTATTTTCAAGGGGCCAAAATTGCAATGTTATATTGGTTAAGCATTATTCTGTAGATCCTGCAATTAATTTCTGATATGCTGGATCTAATCATTTCTCTTTTCATGCTGAACATTACGTGTTTCATTAGTTTATCAGTTTGTCCTGCATCTAATGCAATGGAGGTGTAATTAATTCACTAAAACTTAGATTCATAACATGGCTAATGATTGGGCAGCTCTCATTTGTTACGTTATATTTTCTATGGCTGAGTGGATTTGACATGGGAAAGTTGATTTGATCATTGCCTGTATGCTGACAACTGCTTTTGTTCTGAATATGTAGGTAACTGAAACTGATGGGGAGGTTGCTACAGGTCCAAAATCTTGGCTAACAATTGTAGTTCAGTTTATTGTTGCTATGCTAGTGTTGGACACTTGGCAATATTTCATTCACAGATACATGCATCAGAACAAGTTTCTGTACAAGCACGTTCATTCCCAGCATCACCGTTTGGTTGTACCTTATGCATTTGGAGCTTTATACAATCATCCGTTGGAGGGTCTTCTCCTTGACACAATTGGTGGGGCTTTATCTTTTCTCGTTTCTGGGATGTCACCTCGAGTTGCCATCTTTTTCTTTTCCTTTGCCACCATCAAGACAGTGGATGACCATTGTGGATTATGGCTTCCTGGGAACCTTTTCCACGTGTTCTTCAGAAACAATTCTGCATATCATGATGTTCATCACCAGCTATATGGCAGTAAGTATAACTTCTCACAGCCATTTTTTGTTACGTGGGATAGAATATTTGGCACCTATATGCCTTACTCATTAGAGAAGAGAGCAGGGGGTGGTTTCGAAGCACGAGTTAAGGAAGATTAGTTCAAATAGCAATCATATATTATTTGCGTCCGTGTTAATTTTTTCTCTCCCTGTTAGCCAACCACCATAGTGCTAAATTTGTATCATACACCTATTCTTGTGTCTTACACTTTTGTTACTATCATTTCCTCGAAGTTCCATAGCTGAATCATGTTGTGATTTG ATGGGTATTGTAATCTCTGATCAAATTTTGGGTACTTTTGTACCAATTGTGGTTTATTGGCTATATTCTGGGCTTTACATTCTTCTTGGCTCATTTGAGAACTACCGGTTACACTCTAAGAAAGATGAGCTGGAGAAGAACTTAGTGTCTAAAAGCACTGTGGTTAGAGGCGTTTTCCTTCAACAGATTATTCAGGCAATCGTTGCAATCCTCTTGTTTAAGGTAACTGAAACTGATGGGGAGGTTGCTACAGGTCCAAAATCTTGGCTAACAATTGTAGTTCAGTTTATTGTTGCTATGCTAGTGTTGGACACTTGGCAATATTTCATTCACAGATACATGCATCAGAACAAGTTTCTGTACAAGCACGTTCATTCCCAGCATCACCGTTTGGTTGTACCTTATGCATTTGGAGCTTTATACAATCATCCGTTGGAGGGTCTTCTCCTTGACACAATTGGTGGGGCTTTATCTTTTCTCGTTTCTGGGATGTCACCTCGAGTTGCCATCTTTTTCTTTTCCTTTGCCACCATCAAGACAGTGGATGACCATTGTGGATTATGGCTTCCTGGGAACCTTTTCCACGTGTTCTTCAGAAACAATTCTGCATATCATGATGTTCATCACCAGCTATATGGCAGTAAGTATAACTTCTCACAGCCATTTTTTGTTACGTGGGATAGAATATTTGGCACCTATATGCCTTACTCATTAGAGAAGAGAGCAGGGGGTGGTTTCGAAGCACGAGTTAAGGAAGATTAG ATGGGTATTGTAATCTCTGATCAAATTTTGGGTACTTTTGTACCAATTGTGGTTTATTGGCTATATTCTGGGCTTTACATTCTTCTTGGCTCATTTGAGAACTACCGGTTACACTCTAAGAAAGATGAGCTGGAGAAGAACTTAGTGTCTAAAAGCACTGTGGTTAGAGGCGTTTTCCTTCAACAGATTATTCAGGCAATCGTTGCAATCCTCTTGTTTAAGGTAACTGAAACTGATGGGGAGGTTGCTACAGGTCCAAAATCTTGGCTAACAATTGTAGTTCAGTTTATTGTTGCTATGCTAGTGTTGGACACTTGGCAATATTTCATTCACAGATACATGCATCAGAACAAGTTTCTGTACAAGCACGTTCATTCCCAGCATCACCGTTTGGTTGTACCTTATGCATTTGGAGCTTTATACAATCATCCGTTGGAGGGTCTTCTCCTTGACACAATTGGTGGGGCTTTATCTTTTCTCGTTTCTGGGATGTCACCTCGAGTTGCCATCTTTTTCTTTTCCTTTGCCACCATCAAGACAGTGGATGACCATTGTGGATTATGGCTTCCTGGGAACCTTTTCCACGTGTTCTTCAGAAACAATTCTGCATATCATGATGTTCATCACCAGCTATATGGCAGTAAGTATAACTTCTCACAGCCATTTTTTGTTACGTGGGATAGAATATTTGGCACCTATATGCCTTACTCATTAGAGAAGAGAGCAGGGGGTGGTTTCGAAGCACGAGTTAAGGAAGATTAG MGIVISDQILGTFVPIVVYWLYSGLYILLGSFENYRLHSKKDELEKNLVSKSTVVRGVFLQQIIQAIVAILLFKVTETDGEVATGPKSWLTIVVQFIVAMLVLDTWQYFIHRYMHQNKFLYKHVHSQHHRLVVPYAFGALYNHPLEGLLLDTIGGALSFLVSGMSPRVAIFFFSFATIKTVDDHCGLWLPGNLFHVFFRNNSAYHDVHHQLYGSKYNFSQPFFVTWDRIFGTYMPYSLEKRAGGGFEARVKED*
BLAST of Csa5G605020 vs. Swiss-Prot
Match: SBH2_ARATH (Sphinganine C4-monooxygenase 2 OS=Arabidopsis thaliana GN=SBH2 PE=1 SV=1) HSP 1 Score: 418.7 bits (1075), Expect = 4.6e-116 Identity = 195/250 (78.00%), Postives = 218/250 (87.20%), Query Frame = 1
BLAST of Csa5G605020 vs. Swiss-Prot
Match: SBH1_ARATH (Sphinganine C4-monooxygenase 1 OS=Arabidopsis thaliana GN=SBH1 PE=1 SV=1) HSP 1 Score: 417.9 bits (1073), Expect = 7.8e-116 Identity = 192/250 (76.80%), Postives = 219/250 (87.60%), Query Frame = 1
BLAST of Csa5G605020 vs. Swiss-Prot
Match: SUR2_SCHPO (Sphingolipid C4-hydroxylase sur2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sur2 PE=3 SV=1) HSP 1 Score: 219.5 bits (558), Expect = 4.1e-56 Identity = 109/253 (43.08%), Postives = 146/253 (57.71%), Query Frame = 1
BLAST of Csa5G605020 vs. Swiss-Prot
Match: SUR2_YEAST (Sphingolipid C4-hydroxylase SUR2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SUR2 PE=1 SV=1) HSP 1 Score: 202.6 bits (514), Expect = 5.1e-51 Identity = 102/253 (40.32%), Postives = 142/253 (56.13%), Query Frame = 1
BLAST of Csa5G605020 vs. Swiss-Prot
Match: ERG3_LEPMC (Delta(7)-sterol 5(6)-desaturase OS=Leptosphaeria maculans GN=ERG3 PE=3 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 4.7e-12 Identity = 64/225 (28.44%), Postives = 100/225 (44.44%), Query Frame = 1
BLAST of Csa5G605020 vs. TrEMBL
Match: A0A0A0KQL6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G605020 PE=3 SV=1) HSP 1 Score: 521.9 bits (1343), Expect = 4.3e-145 Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 1
BLAST of Csa5G605020 vs. TrEMBL
Match: W9R575_9ROSA (Sphingoid base hydroxylase 2 OS=Morus notabilis GN=L484_003193 PE=3 SV=1) HSP 1 Score: 434.1 bits (1115), Expect = 1.2e-118 Identity = 204/254 (80.31%), Postives = 223/254 (87.80%), Query Frame = 1
BLAST of Csa5G605020 vs. TrEMBL
Match: D7TN95_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0026g02310 PE=3 SV=1) HSP 1 Score: 432.2 bits (1110), Expect = 4.4e-118 Identity = 201/250 (80.40%), Postives = 223/250 (89.20%), Query Frame = 1
BLAST of Csa5G605020 vs. TrEMBL
Match: A0A067LAS4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15596 PE=3 SV=1) HSP 1 Score: 429.5 bits (1103), Expect = 2.9e-117 Identity = 202/250 (80.80%), Postives = 223/250 (89.20%), Query Frame = 1
BLAST of Csa5G605020 vs. TrEMBL
Match: A0A061EAB0_THECC (Sphingoid base hydroxylase 2 OS=Theobroma cacao GN=TCM_011723 PE=3 SV=1) HSP 1 Score: 429.1 bits (1102), Expect = 3.8e-117 Identity = 199/250 (79.60%), Postives = 223/250 (89.20%), Query Frame = 1
BLAST of Csa5G605020 vs. TAIR10
Match: AT1G14290.1 (AT1G14290.1 sphingoid base hydroxylase 2) HSP 1 Score: 418.7 bits (1075), Expect = 2.6e-117 Identity = 195/250 (78.00%), Postives = 218/250 (87.20%), Query Frame = 1
BLAST of Csa5G605020 vs. TAIR10
Match: AT1G69640.1 (AT1G69640.1 sphingoid base hydroxylase 1) HSP 1 Score: 417.9 bits (1073), Expect = 4.4e-117 Identity = 192/250 (76.80%), Postives = 219/250 (87.60%), Query Frame = 1
BLAST of Csa5G605020 vs. TAIR10
Match: AT3G02590.1 (AT3G02590.1 Fatty acid hydroxylase superfamily protein) HSP 1 Score: 57.8 bits (138), Expect = 1.2e-08 Identity = 39/157 (24.84%), Postives = 73/157 (46.50%), Query Frame = 1
BLAST of Csa5G605020 vs. NCBI nr
Match: gi|449435354|ref|XP_004135460.1| (PREDICTED: sphinganine C(4)-monooxygenase 2 [Cucumis sativus]) HSP 1 Score: 521.9 bits (1343), Expect = 6.1e-145 Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 1
BLAST of Csa5G605020 vs. NCBI nr
Match: gi|659091053|ref|XP_008446343.1| (PREDICTED: sphinganine C(4)-monooxygenase 2-like [Cucumis melo]) HSP 1 Score: 520.4 bits (1339), Expect = 1.8e-144 Identity = 252/253 (99.60%), Postives = 252/253 (99.60%), Query Frame = 1
BLAST of Csa5G605020 vs. NCBI nr
Match: gi|659082180|ref|XP_008441706.1| (PREDICTED: sphinganine C(4)-monooxygenase 1-like [Cucumis melo]) HSP 1 Score: 438.7 bits (1127), Expect = 6.8e-120 Identity = 206/251 (82.07%), Postives = 221/251 (88.05%), Query Frame = 1
BLAST of Csa5G605020 vs. NCBI nr
Match: gi|449442297|ref|XP_004138918.1| (PREDICTED: sphinganine C(4)-monooxygenase 1-like [Cucumis sativus]) HSP 1 Score: 434.5 bits (1116), Expect = 1.3e-118 Identity = 202/251 (80.48%), Postives = 220/251 (87.65%), Query Frame = 1
BLAST of Csa5G605020 vs. NCBI nr
Match: gi|703074186|ref|XP_010089753.1| (Sphingoid base hydroxylase 2 [Morus notabilis]) HSP 1 Score: 434.1 bits (1115), Expect = 1.7e-118 Identity = 204/254 (80.31%), Postives = 223/254 (87.80%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |