Csa5G597490 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa5G597490
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr5 : 21624138 .. 21624478 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCACGATTTGACTTGGTTAAGCACATTATTTGCACAGGAATCAAGTGGGCCTCTTAAAGATATAAATCATATTTTGATGCAATGTGACTATTCATCTGTGGTATCATTGGGGGAGATCCTTTGGCAATTGCAAGGTTAGCCACTTCATTTCTCTCCATTTGCACTTGAGCCTGTTTAATTATATGTTTTTGTAGTTTTAAAATCGTTGGGGCATTTTTCTTCTAGGGAGATTTATAGTTCACGTTCATTAAAGAAGAGCTAATATGGAATCTAAAGTTTATGTTATCATTCATAACAGATTCGATCTTCCTTTCTTGGGGACTTGGACGTGCTCTTTGA

mRNA sequence

ATGCACGATTTGACTTGGTTAAGCACATTATTTGCACAGGAATCAAGTGGGCCTCTTAAAGATATAAATCATATTTTGATGCAATGTGACTATTCATCTGTGGTATCATTGGGGGAGATCCTTTGGCAATTGCAAGATTCGATCTTCCTTTCTTGGGGACTTGGACGTGCTCTTTGA

Coding sequence (CDS)

ATGCACGATTTGACTTGGTTAAGCACATTATTTGCACAGGAATCAAGTGGGCCTCTTAAAGATATAAATCATATTTTGATGCAATGTGACTATTCATCTGTGGTATCATTGGGGGAGATCCTTTGGCAATTGCAAGATTCGATCTTCCTTTCTTGGGGACTTGGACGTGCTCTTTGA

Protein sequence

MHDLTWLSTLFAQESSGPLKDINHILMQCDYSSVVSLGEILWQLQDSIFLSWGLGRAL*
Homology
[Close]
BLAST of Csa5G597490 vs. TrEMBL
Match: A0A0A0KS56_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G597490 PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 1.7e-25
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 1 

Query: 1  MHDLTWLSTLFAQESSGPLKDINHILMQCDYSSVVSLGEILWQLQDSIFLSWGLGRAL 59
          MHDLTWLSTLFAQESSGPLKDINHILMQCDYSSVVSLGEILWQLQDSIFLSWGLGRAL
Sbjct: 1  MHDLTWLSTLFAQESSGPLKDINHILMQCDYSSVVSLGEILWQLQDSIFLSWGLGRAL 58

[Close]
BLAST of Csa5G597490 vs. NCBI nr
Match: gi|700196562|gb|KGN51739.1| (hypothetical protein Csa_5G597490 [Cucumis sativus])

HSP 1 Score: 122.5 bits (306), Expect = 2.5e-25
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 1 

Query: 1  MHDLTWLSTLFAQESSGPLKDINHILMQCDYSSVVSLGEILWQLQDSIFLSWGLGRAL 59
          MHDLTWLSTLFAQESSGPLKDINHILMQCDYSSVVSLGEILWQLQDSIFLSWGLGRAL
Sbjct: 1  MHDLTWLSTLFAQESSGPLKDINHILMQCDYSSVVSLGEILWQLQDSIFLSWGLGRAL 58

The following BLAST results are available for this feature:
BLAST of Csa5G597490 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KS56_CUCSA1.7e-25100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_5G597490 PE=4 SV=1[more]
BLAST of Csa5G597490 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700196562|gb|KGN51739.1|2.5e-25100.00hypothetical protein Csa_5G597490 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa5G597490.1Csa5G597490.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa5G597490CSPI05G22110Wild cucumber (PI 183967)cpicuB239
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa5G597490Watermelon (97103) v2cuwmbB383
Csa5G597490Watermelon (97103) v2cuwmbB400
Csa5G597490Wax gourdcuwgoB512
Csa5G597490Cucumber (Chinese Long) v2cucuB064
Csa5G597490Cucumber (Gy14) v1cgycuB410
Csa5G597490Cucumber (Gy14) v1cgycuB551
Csa5G597490Cucurbita maxima (Rimu)cmacuB413
Csa5G597490Cucurbita maxima (Rimu)cmacuB749
Csa5G597490Cucurbita maxima (Rimu)cmacuB803
Csa5G597490Cucurbita moschata (Rifu)cmocuB173
Csa5G597490Cucurbita moschata (Rifu)cmocuB402
Csa5G597490Cucurbita moschata (Rifu)cmocuB739
Csa5G597490Cucurbita moschata (Rifu)cmocuB793
Csa5G597490Melon (DHL92) v3.5.1cumeB377
Csa5G597490Melon (DHL92) v3.5.1cumeB386
Csa5G597490Melon (DHL92) v3.5.1cumeB393
Csa5G597490Watermelon (Charleston Gray)cuwcgB394
Csa5G597490Watermelon (Charleston Gray)cuwcgB411
Csa5G597490Watermelon (97103) v1cuwmB376
Csa5G597490Watermelon (97103) v1cuwmB401
Csa5G597490Cucurbita pepo (Zucchini)cpecuB047
Csa5G597490Cucurbita pepo (Zucchini)cpecuB118
Csa5G597490Cucurbita pepo (Zucchini)cpecuB440
Csa5G597490Cucurbita pepo (Zucchini)cpecuB836
Csa5G597490Bottle gourd (USVL1VR-Ls)culsiB368
Csa5G597490Bottle gourd (USVL1VR-Ls)culsiB388
Csa5G597490Cucumber (Gy14) v2cgybcuB076
Csa5G597490Cucumber (Gy14) v2cgybcuB223
Csa5G597490Melon (DHL92) v3.6.1cumedB359
Csa5G597490Melon (DHL92) v3.6.1cumedB376
Csa5G597490Silver-seed gourdcarcuB0271
Csa5G597490Silver-seed gourdcarcuB0530
Csa5G597490Silver-seed gourdcarcuB0648
Csa5G597490Silver-seed gourdcarcuB0743