Csa5G594460 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa5G594460
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr5 : 21579879 .. 21580049 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAACAAAGGTACTGGCGGGAAGACCAAATGAAAGATGAAGAAATGAGAAGAAAGTGGAAGATGGAAGGAAAATGTGAAGCGGTGGAAGCGTACATGAAGGCACCAGAATTGGAAGATGAAGAATTGGAAGATGAAGAAATCAAAAGTGTGTTTGAAATTGGAATATGA

mRNA sequence

ATGGAACAAAGGTACTGGCGGGAAGACCAAATGAAAGATGAAGAAATGAGAAGAAAGTGGAAGATGGAAGGAAAATGTGAAGCGGTGGAAGCGTACATGAAGGCACCAGAATTGGAAGATGAAGAATTGGAAGATGAAGAAATCAAAAGTGTGTTTGAAATTGGAATATGA

Coding sequence (CDS)

ATGGAACAAAGGTACTGGCGGGAAGACCAAATGAAAGATGAAGAAATGAGAAGAAAGTGGAAGATGGAAGGAAAATGTGAAGCGGTGGAAGCGTACATGAAGGCACCAGAATTGGAAGATGAAGAATTGGAAGATGAAGAAATCAAAAGTGTGTTTGAAATTGGAATATGA

Protein sequence

MEQRYWREDQMKDEEMRRKWKMEGKCEAVEAYMKAPELEDEELEDEEIKSVFEIGI*
Homology
[Close]
BLAST of Csa5G594460 vs. TrEMBL
Match: A0A0A0KS50_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G594460 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 1.4e-24
Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 1 

Query: 1  MEQRYWREDQMKDEEMRRKWKMEGKCEAVEAYMKAPELEDEELEDEEIKSVFEIGI 57
          MEQRYWREDQMKDEEMRRKWKMEGKCEAVEAYMKAPELEDEELEDEEIKSVFEIGI
Sbjct: 1  MEQRYWREDQMKDEEMRRKWKMEGKCEAVEAYMKAPELEDEELEDEEIKSVFEIGI 56

[Close]
BLAST of Csa5G594460 vs. NCBI nr
Match: gi|700196557|gb|KGN51734.1| (hypothetical protein Csa_5G594460 [Cucumis sativus])

HSP 1 Score: 119.4 bits (298), Expect = 2.0e-24
Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 1 

Query: 1  MEQRYWREDQMKDEEMRRKWKMEGKCEAVEAYMKAPELEDEELEDEEIKSVFEIGI 57
          MEQRYWREDQMKDEEMRRKWKMEGKCEAVEAYMKAPELEDEELEDEEIKSVFEIGI
Sbjct: 1  MEQRYWREDQMKDEEMRRKWKMEGKCEAVEAYMKAPELEDEELEDEEIKSVFEIGI 56

The following BLAST results are available for this feature:
BLAST of Csa5G594460 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KS50_CUCSA1.4e-24100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_5G594460 PE=4 SV=1[more]
BLAST of Csa5G594460 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700196557|gb|KGN51734.1|2.0e-24100.00hypothetical protein Csa_5G594460 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0020037 heme binding
molecular_function GO:0005506 iron ion binding
molecular_function GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU096948cucumber EST collection version 3.0transcribed_cluster
CU112419cucumber EST collection version 3.0transcribed_cluster
CU127895cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa5G594460.1Csa5G594460.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU112419CU112419transcribed_cluster
CU096948CU096948transcribed_cluster
CU127895CU127895transcribed_cluster


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa5G594460CSPI05G22040Wild cucumber (PI 183967)cpicuB239
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa5G594460Cucurbita moschata (Rifu)cmocuB173
Csa5G594460Cucurbita moschata (Rifu)cmocuB402
Csa5G594460Cucurbita moschata (Rifu)cmocuB739
Csa5G594460Cucurbita moschata (Rifu)cmocuB793
Csa5G594460Melon (DHL92) v3.5.1cumeB377
Csa5G594460Melon (DHL92) v3.5.1cumeB393
Csa5G594460Watermelon (Charleston Gray)cuwcgB394
Csa5G594460Watermelon (Charleston Gray)cuwcgB411
Csa5G594460Watermelon (97103) v1cuwmB376
Csa5G594460Watermelon (97103) v1cuwmB401
Csa5G594460Cucurbita pepo (Zucchini)cpecuB047
Csa5G594460Cucurbita pepo (Zucchini)cpecuB118
Csa5G594460Cucurbita pepo (Zucchini)cpecuB440
Csa5G594460Cucurbita pepo (Zucchini)cpecuB836
Csa5G594460Bottle gourd (USVL1VR-Ls)culsiB368
Csa5G594460Bottle gourd (USVL1VR-Ls)culsiB388
Csa5G594460Cucumber (Gy14) v2cgybcuB076
Csa5G594460Cucumber (Gy14) v2cgybcuB223
Csa5G594460Melon (DHL92) v3.6.1cumedB359
Csa5G594460Melon (DHL92) v3.6.1cumedB376
Csa5G594460Silver-seed gourdcarcuB0271
Csa5G594460Silver-seed gourdcarcuB0530
Csa5G594460Silver-seed gourdcarcuB0648
Csa5G594460Watermelon (97103) v2cuwmbB383
Csa5G594460Watermelon (97103) v2cuwmbB400
Csa5G594460Wax gourdcuwgoB512
Csa5G594460Cucumber (Chinese Long) v2cucuB064
Csa5G594460Cucumber (Gy14) v1cgycuB410
Csa5G594460Cucumber (Gy14) v1cgycuB551
Csa5G594460Cucurbita maxima (Rimu)cmacuB413
Csa5G594460Cucurbita maxima (Rimu)cmacuB749
Csa5G594460Cucurbita maxima (Rimu)cmacuB803