Csa5G592790 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa5G592790
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionPHD finger protein ALFIN-LIKE 2; contains IPR021998 (Protein of unknown function DUF3594)
LocationChr5 : 21448024 .. 21449339 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTATGGGTGAGTACTCAGTGCGGTTTAATGGAAAGATTAATTATAATAAAGCTTTAGCCAGCTGTCTTAGTTTGAAACTTAATGGCGTCAACGGCATCCAACGGCTACATTTTTAGGTTTACTTACTTCATTATTTAACTTTACAGATAACCTCCATCGCAAACCAATTTTCTCCAGAATTTTCTTTTTCCGCCTCAGTGCACGCTGGTCTAACCTCTGAACCCTAATACTGATTTTCCTTTTCCTTTTCCTTTTCCTTTTCCTTTTCCTTTTCCTTTTCCTTTTCCTTTTCCTTTTCCTTTTCCTTTTCCTTTTCCTTTTCCTTTTCCTTTTCCTTTTCCTTTTCCTTTTCCTTTTCCTTTTCCTTTTCCTTTTCCTTTTCCTTTTCCTTTTCCTTTTCCTTTTCTTCTTCTCATTATCAGACGTTTGTGAATTCTACGGCCTTTGTGATTCAGGTGATGCGGCTTTCTAAATTCTGGGCACTATCTTTCTACATCGTTTTTGCTTCGTGTCTTTTTTTTTTTTTTACTGTTTTTCGCTAAATGTCAAATTTAGGGCTCGTTTGACAAGCTTTTGATGCGTATTGTTTCCTAATCACTTTTGATTACATAGTATTGGCAATTGATTCAGATTAAATGTTTGTTTCTTGAATTCGAAGTGTTCAATTTTTATAATTTCTGCAGCGTTTTTATCTAGATGATTTTTTTTTAATAAATGATATTTACTGTTAATTTCTGGCGAATTTAAACGAGATAATGAGTAGAGGTATTATATTCTAGTCTCTTTTAGTGACAAAGGATTGGGAGTTGCTTCAGATTTAATGTTTTTTCCTTGAATTCGAGATCCTGGAATTGTTTTCAAATACACTTACCGACTTACGTTTATTTTAATTAGACAGTAACTGGTGTGTACCAGGATCGGTTTTCTATTTCAATTCTTCTCTGAGAGTTGGGATTTACTATCGTTTTATGACGAAGCTTCTCATATATTTTAAACTTTGATTACTACTTTTTCAGGTGAGGAAATTTTTTGTCTGTATGGACATCCTAATGAAACATGGGAAATGGTTCTTCCAGTAGGCAGAGGTTCCACCGGAGCTTCTAGAGCCTGCACTTGGAATTAATTTTGCAACAGATGGCATGGACAGAAAATATTGGCGACCTCTTGTTGCTGTACATGGTGATTCCTGTTTGCTCTCTGTGGCTTTCTATTTTGGAGCAAGACTTGACCGAAGCAAAAGGTACAACTGTTCCACTTTTGAATTTTTGCTTGTGAGCTTTAAGTTAGGTTCTGTTAAATGCAATTCTTTTTAA

mRNA sequence

ATGGTATGGATAACCTCCATCGCAAACCAATTTTCTCCAGAATTTTCTTTTTCCGCCTCAGTGCACGCTGACGTTTGTGAATTCTACGGCCTTTGTGATTCAGGTGAGGAAATTTTTTGTCTGTATGGACATCCTAATGAAACATGGGAAATGGTTCTTCCAGTAGGCAGAGATGGCATGGACAGAAAATATTGGCGACCTCTTGTTGCTGTACATGGTGATTCCTGTTTGCTCTCTGTGGCTTTCTATTTTGGAGCAAGACTTGACCGAAGCAAAAGGTACAACTGTTCCACTTTTGAATTTTTGCTTGTGAGCTTTAAGTTAGGTTCTGTTAAATGCAATTCTTTTTAA

Coding sequence (CDS)

ATGGTATGGATAACCTCCATCGCAAACCAATTTTCTCCAGAATTTTCTTTTTCCGCCTCAGTGCACGCTGACGTTTGTGAATTCTACGGCCTTTGTGATTCAGGTGAGGAAATTTTTTGTCTGTATGGACATCCTAATGAAACATGGGAAATGGTTCTTCCAGTAGGCAGAGATGGCATGGACAGAAAATATTGGCGACCTCTTGTTGCTGTACATGGTGATTCCTGTTTGCTCTCTGTGGCTTTCTATTTTGGAGCAAGACTTGACCGAAGCAAAAGGTACAACTGTTCCACTTTTGAATTTTTGCTTGTGAGCTTTAAGTTAGGTTCTGTTAAATGCAATTCTTTTTAA

Protein sequence

MVWITSIANQFSPEFSFSASVHADVCEFYGLCDSGEEIFCLYGHPNETWEMVLPVGRDGMDRKYWRPLVAVHGDSCLLSVAFYFGARLDRSKRYNCSTFEFLLVSFKLGSVKCNSF*
Homology
[Close]
BLAST of Csa5G592790 vs. Swiss-Prot
Match: ALFL2_ARATH (PHD finger protein ALFIN-LIKE 2 OS=Arabidopsis thaliana GN=AL2 PE=1 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 5.0e-17
Identity = 45/86 (52.33%), Postives = 51/86 (59.30%), Query Frame = 1 

Query: 24  DVCEFYGLCDSGEEIFCLYGHPNETWEMVLPV----------------GRDGMDRKYWRP 83
           DV +FY  CD  +E  CLYGHPNE+WE+ LP                  RDGM RK W  
Sbjct: 34  DVDDFYSQCDPEKENLCLYGHPNESWEVNLPAEEVPPELPEPALGINFARDGMQRKDWLS 93

Query: 84  LVAVHGDSCLLSVAFYFGARLDRSKR 94
           LVAVH D  LLSV+FYFGARL+R++R
Sbjct: 94  LVAVHSDCWLLSVSFYFGARLNRNER 119

[Close]
BLAST of Csa5G592790 vs. Swiss-Prot
Match: ALFL2_ORYSI (PHD finger protein ALFIN-LIKE 2 OS=Oryza sativa subsp. indica GN=OsI_25444 PE=3 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 8.5e-17
Identity = 45/86 (52.33%), Postives = 50/86 (58.14%), Query Frame = 1 

Query: 24  DVCEFYGLCDSGEEIFCLYGHPNETWEMVLPV----------------GRDGMDRKYWRP 83
           DV EFYG CD  +E  CLYGHPN  WE+ LP                  RDGM R+ W  
Sbjct: 35  DVDEFYGFCDPEKENLCLYGHPNGRWEVALPAEEVPPELPEPALGINFARDGMHRRDWLS 94

Query: 84  LVAVHGDSCLLSVAFYFGARLDRSKR 94
           LVAVH DS LLSVAF+FGARL+ ++R
Sbjct: 95  LVAVHSDSWLLSVAFFFGARLNGNER 120

[Close]
BLAST of Csa5G592790 vs. Swiss-Prot
Match: ALFL2_ORYSJ (PHD finger protein ALFIN-LIKE 2 OS=Oryza sativa subsp. japonica GN=Os07g0233300 PE=2 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 8.5e-17
Identity = 45/86 (52.33%), Postives = 50/86 (58.14%), Query Frame = 1 

Query: 24  DVCEFYGLCDSGEEIFCLYGHPNETWEMVLPV----------------GRDGMDRKYWRP 83
           DV EFYG CD  +E  CLYGHPN  WE+ LP                  RDGM R+ W  
Sbjct: 35  DVDEFYGFCDPEKENLCLYGHPNGRWEVALPAEEVPPELPEPALGINFARDGMHRRDWLS 94

Query: 84  LVAVHGDSCLLSVAFYFGARLDRSKR 94
           LVAVH DS LLSVAF+FGARL+ ++R
Sbjct: 95  LVAVHSDSWLLSVAFFFGARLNGNER 120

[Close]
BLAST of Csa5G592790 vs. Swiss-Prot
Match: ALFL1_ARATH (PHD finger protein ALFIN-LIKE 1 OS=Arabidopsis thaliana GN=AL1 PE=1 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 1.4e-16
Identity = 50/107 (46.73%), Postives = 57/107 (53.27%), Query Frame = 1 

Query: 4   ITSIANQFSPEFS-FSASVHADVCEFYGLCDSGEEIFCLYGHPNETWEMVLPV------- 63
           +  I   FS   S F  ++  DV +FY LCD   E  CLYGHPN TWE+ LP        
Sbjct: 11  VEEIFKDFSGRRSGFLRALSVDVDKFYSLCDPEMENLCLYGHPNGTWEVNLPAEEVPPEL 70

Query: 64  ---------GRDGMDRKYWRPLVAVHGDSCLLSVAFYFGARLDRSKR 94
                     RDGM RK W  LVAVH D  LLSV+ YFGARL+R++R
Sbjct: 71  PEPALGINFARDGMQRKDWLSLVAVHSDCWLLSVSSYFGARLNRNER 117

[Close]
BLAST of Csa5G592790 vs. Swiss-Prot
Match: ALFL6_ORYSJ (PHD finger protein ALFIN-LIKE 6 OS=Oryza sativa subsp. japonica GN=Os01g0887700 PE=2 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 4.2e-16
Identity = 47/88 (53.41%), Postives = 50/88 (56.82%), Query Frame = 1 

Query: 24  DVCEFYGLCDSGEEIFCLYGHPNETWEMVLPV----------------GRDGMDRKYWRP 83
           DV +FY LCD  +E  CLYG+PNETWE+ LP                  RDGM+ K W  
Sbjct: 51  DVEKFYKLCDPEKENLCLYGYPNETWEVTLPAEEVPPEIPEPALGINFARDGMNEKDWLA 110

Query: 84  LVAVHGDSCLLSVAFYFGAR--LDRSKR 94
           LVAVH DS LLSVAFYFGAR   DR  R
Sbjct: 111 LVAVHSDSWLLSVAFYFGARFGFDREAR 138

[Close]
BLAST of Csa5G592790 vs. TrEMBL
Match: A0A0A0KPZ8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G592790 PE=4 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 1.9e-63
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 1 

Query: 1   MVWITSIANQFSPEFSFSASVHADVCEFYGLCDSGEEIFCLYGHPNETWEMVLPVGRDGM 60
           MVWITSIANQFSPEFSFSASVHADVCEFYGLCDSGEEIFCLYGHPNETWEMVLPVGRDGM
Sbjct: 1   MVWITSIANQFSPEFSFSASVHADVCEFYGLCDSGEEIFCLYGHPNETWEMVLPVGRDGM 60

Query: 61  DRKYWRPLVAVHGDSCLLSVAFYFGARLDRSKRYNCSTFEFLLVSFKLGSVKCNSF 117
           DRKYWRPLVAVHGDSCLLSVAFYFGARLDRSKRYNCSTFEFLLVSFKLGSVKCNSF
Sbjct: 61  DRKYWRPLVAVHGDSCLLSVAFYFGARLDRSKRYNCSTFEFLLVSFKLGSVKCNSF 116

[Close]
BLAST of Csa5G592790 vs. TrEMBL
Match: A0A0A0L9V8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G731170 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.3e-19
Identity = 53/86 (61.63%), Postives = 59/86 (68.60%), Query Frame = 1 

Query: 24  DVCEFYGLCDSGEEIFCLYGHPNETWEMVLPV----------------GRDGMDRKYWRP 83
           DV EFYGLCD  +E  CLYGHPNETWE+VLPV                 RDGM+RK W  
Sbjct: 32  DVDEFYGLCDPDKENLCLYGHPNETWEVVLPVEEVPPELPEPALGINFARDGMNRKDWLS 91

Query: 84  LVAVHGDSCLLSVAFYFGARLDRSKR 94
           LVAVH DS LLSVAFYFGARL+R++R
Sbjct: 92  LVAVHSDSWLLSVAFYFGARLNRNER 117

[Close]
BLAST of Csa5G592790 vs. TrEMBL
Match: E5GBF1_CUCME (Phd/F-box containing protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.3e-19
Identity = 53/86 (61.63%), Postives = 59/86 (68.60%), Query Frame = 1 

Query: 24  DVCEFYGLCDSGEEIFCLYGHPNETWEMVLPV----------------GRDGMDRKYWRP 83
           DV EFYGLCD  +E  CLYGHPNETWE+VLPV                 RDGM+RK W  
Sbjct: 32  DVDEFYGLCDPDKENLCLYGHPNETWEVVLPVEEVPPELPEPALGINFARDGMNRKDWLS 91

Query: 84  LVAVHGDSCLLSVAFYFGARLDRSKR 94
           LVAVH DS LLSVAFYFGARL+R++R
Sbjct: 92  LVAVHSDSWLLSVAFYFGARLNRNER 117

[Close]
BLAST of Csa5G592790 vs. TrEMBL
Match: D9ZIL9_MALDO (ALF domain class transcription factor OS=Malus domestica GN=ALF7 PE=2 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 6.3e-19
Identity = 52/86 (60.47%), Postives = 57/86 (66.28%), Query Frame = 1 

Query: 24  DVCEFYGLCDSGEEIFCLYGHPNETWEMVLPV----------------GRDGMDRKYWRP 83
           DV EFYGLCD  +E  CLYGHPNETWE+ LP                  RDGM+RK W  
Sbjct: 29  DVDEFYGLCDPEKENLCLYGHPNETWEVTLPAEEVPPELPEPALGINFARDGMNRKDWLS 88

Query: 84  LVAVHGDSCLLSVAFYFGARLDRSKR 94
           LVAVH DS LLSVAFYFGARL+RS+R
Sbjct: 89  LVAVHSDSWLLSVAFYFGARLNRSER 114

[Close]
BLAST of Csa5G592790 vs. TrEMBL
Match: M5W0X9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010710mg PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 1.1e-18
Identity = 51/86 (59.30%), Postives = 57/86 (66.28%), Query Frame = 1 

Query: 24  DVCEFYGLCDSGEEIFCLYGHPNETWEMVLPV----------------GRDGMDRKYWRP 83
           DV EFYGLCD  +E  CLYGHPNETWE+ LP                  RDGM+RK W  
Sbjct: 31  DVDEFYGLCDPDKENLCLYGHPNETWEVTLPAEEVPPELPEPALGINFARDGMNRKDWLS 90

Query: 84  LVAVHGDSCLLSVAFYFGARLDRSKR 94
           LVAVH DS LLSVAFYFGARL+R++R
Sbjct: 91  LVAVHSDSWLLSVAFYFGARLNRNER 116

[Close]
BLAST of Csa5G592790 vs. TAIR10
Match: AT3G11200.1 (AT3G11200.1 alfin-like 2)

HSP 1 Score: 88.6 bits (218), Expect = 2.8e-18
Identity = 45/86 (52.33%), Postives = 51/86 (59.30%), Query Frame = 1 

Query: 24  DVCEFYGLCDSGEEIFCLYGHPNETWEMVLPV----------------GRDGMDRKYWRP 83
           DV +FY  CD  +E  CLYGHPNE+WE+ LP                  RDGM RK W  
Sbjct: 34  DVDDFYSQCDPEKENLCLYGHPNESWEVNLPAEEVPPELPEPALGINFARDGMQRKDWLS 93

Query: 84  LVAVHGDSCLLSVAFYFGARLDRSKR 94
           LVAVH D  LLSV+FYFGARL+R++R
Sbjct: 94  LVAVHSDCWLLSVSFYFGARLNRNER 119

[Close]
BLAST of Csa5G592790 vs. TAIR10
Match: AT5G05610.1 (AT5G05610.1 alfin-like 1)

HSP 1 Score: 87.0 bits (214), Expect = 8.2e-18
Identity = 50/107 (46.73%), Postives = 57/107 (53.27%), Query Frame = 1 

Query: 4   ITSIANQFSPEFS-FSASVHADVCEFYGLCDSGEEIFCLYGHPNETWEMVLPV------- 63
           +  I   FS   S F  ++  DV +FY LCD   E  CLYGHPN TWE+ LP        
Sbjct: 11  VEEIFKDFSGRRSGFLRALSVDVDKFYSLCDPEMENLCLYGHPNGTWEVNLPAEEVPPEL 70

Query: 64  ---------GRDGMDRKYWRPLVAVHGDSCLLSVAFYFGARLDRSKR 94
                     RDGM RK W  LVAVH D  LLSV+ YFGARL+R++R
Sbjct: 71  PEPALGINFARDGMQRKDWLSLVAVHSDCWLLSVSSYFGARLNRNER 117

[Close]
BLAST of Csa5G592790 vs. TAIR10
Match: AT2G02470.1 (AT2G02470.1 alfin-like 6)

HSP 1 Score: 82.0 bits (201), Expect = 2.6e-16
Identity = 45/95 (47.37%), Postives = 49/95 (51.58%), Query Frame = 1 

Query: 24  DVCEFYGLCDSGEEIFCLYGHPNETWEMVLPV----------------GRDGMDRKYWRP 83
           D+ +FY  CD  +E  CLYG PNETWE+ LPV                 RDGM  K W  
Sbjct: 33  DMVKFYQTCDPEKENLCLYGLPNETWEVNLPVEEVPPELPEPALGINFARDGMQEKDWVS 92

Query: 84  LVAVHGDSCLLSVAFYFGARLDRSKRYNCSTFEFL 103
           LVAVH DS LLSVAFYFGAR    K      F+ +
Sbjct: 93  LVAVHSDSWLLSVAFYFGARFGFGKNERKRLFQMI 127

[Close]
BLAST of Csa5G592790 vs. TAIR10
Match: AT1G14510.1 (AT1G14510.1 alfin-like 7)

HSP 1 Score: 81.6 bits (200), Expect = 3.4e-16
Identity = 45/99 (45.45%), Postives = 51/99 (51.52%), Query Frame = 1 

Query: 20  SVHADVCEFYGLCDSGEEIFCLYGHPNETWEMVLPV----------------GRDGMDRK 79
           ++  DV +FY  CD  +E  CLYG PNETWE+ LPV                 RDGM  K
Sbjct: 29  ALSTDVQKFYHQCDPEKENLCLYGLPNETWEVNLPVEEVPPELPEPALGINFARDGMQEK 88

Query: 80  YWRPLVAVHGDSCLLSVAFYFGARLDRSKRYNCSTFEFL 103
            W  LVAVH DS L+SVAFYFGAR    K      F+ +
Sbjct: 89  DWISLVAVHSDSWLISVAFYFGARFGFGKNERKRLFQMI 127

[Close]
BLAST of Csa5G592790 vs. TAIR10
Match: AT5G26210.1 (AT5G26210.1 alfin-like 4)

HSP 1 Score: 80.1 bits (196), Expect = 1.0e-15
Identity = 44/93 (47.31%), Postives = 50/93 (53.76%), Query Frame = 1 

Query: 24  DVCEFYGLCDSGEEIFCLYGHPNETWEMVLPV----------------GRDGMDRKYWRP 83
           DV EF+ LCD  +E  CLYGHPNE WE+ LP                  RDGM  K W  
Sbjct: 33  DVQEFFRLCDPEKENLCLYGHPNEHWEVNLPAEEVPPELPEPVLGINFARDGMAEKDWLS 92

Query: 84  LVAVHGDSCLLSVAFYFGARL-----DRSKRYN 96
           LVAVH D+ LL+VAF+FGAR      DR + +N
Sbjct: 93  LVAVHSDAWLLAVAFFFGARFGFDKADRKRLFN 125

[Close]
BLAST of Csa5G592790 vs. NCBI nr
Match: gi|700196538|gb|KGN51715.1| (hypothetical protein Csa_5G592790 [Cucumis sativus])

HSP 1 Score: 249.6 bits (636), Expect = 2.7e-63
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 1 

Query: 1   MVWITSIANQFSPEFSFSASVHADVCEFYGLCDSGEEIFCLYGHPNETWEMVLPVGRDGM 60
           MVWITSIANQFSPEFSFSASVHADVCEFYGLCDSGEEIFCLYGHPNETWEMVLPVGRDGM
Sbjct: 1   MVWITSIANQFSPEFSFSASVHADVCEFYGLCDSGEEIFCLYGHPNETWEMVLPVGRDGM 60

Query: 61  DRKYWRPLVAVHGDSCLLSVAFYFGARLDRSKRYNCSTFEFLLVSFKLGSVKCNSF 117
           DRKYWRPLVAVHGDSCLLSVAFYFGARLDRSKRYNCSTFEFLLVSFKLGSVKCNSF
Sbjct: 61  DRKYWRPLVAVHGDSCLLSVAFYFGARLDRSKRYNCSTFEFLLVSFKLGSVKCNSF 116

[Close]
BLAST of Csa5G592790 vs. NCBI nr
Match: gi|449439888|ref|XP_004137717.1| (PREDICTED: PHD finger protein ALFIN-LIKE 1-like [Cucumis sativus])

HSP 1 Score: 104.0 bits (258), Expect = 1.8e-19
Identity = 53/86 (61.63%), Postives = 59/86 (68.60%), Query Frame = 1 

Query: 24  DVCEFYGLCDSGEEIFCLYGHPNETWEMVLPV----------------GRDGMDRKYWRP 83
           DV EFYGLCD  +E  CLYGHPNETWE+VLPV                 RDGM+RK W  
Sbjct: 32  DVDEFYGLCDPDKENLCLYGHPNETWEVVLPVEEVPPELPEPALGINFARDGMNRKDWLS 91

Query: 84  LVAVHGDSCLLSVAFYFGARLDRSKR 94
           LVAVH DS LLSVAFYFGARL+R++R
Sbjct: 92  LVAVHSDSWLLSVAFYFGARLNRNER 117

[Close]
BLAST of Csa5G592790 vs. NCBI nr
Match: gi|659083546|ref|XP_008442414.1| (PREDICTED: PHD finger protein ALFIN-LIKE 1-like [Cucumis melo])

HSP 1 Score: 104.0 bits (258), Expect = 1.8e-19
Identity = 53/86 (61.63%), Postives = 59/86 (68.60%), Query Frame = 1 

Query: 24  DVCEFYGLCDSGEEIFCLYGHPNETWEMVLPV----------------GRDGMDRKYWRP 83
           DV EFYGLCD  +E  CLYGHPNETWE+VLPV                 RDGM+RK W  
Sbjct: 32  DVDEFYGLCDPDKENLCLYGHPNETWEVVLPVEEVPPELPEPALGINFARDGMNRKDWLS 91

Query: 84  LVAVHGDSCLLSVAFYFGARLDRSKR 94
           LVAVH DS LLSVAFYFGARL+R++R
Sbjct: 92  LVAVHSDSWLLSVAFYFGARLNRNER 117

[Close]
BLAST of Csa5G592790 vs. NCBI nr
Match: gi|470133445|ref|XP_004302576.1| (PREDICTED: PHD finger protein ALFIN-LIKE 1-like [Fragaria vesca subsp. vesca])

HSP 1 Score: 101.7 bits (252), Expect = 9.1e-19
Identity = 52/86 (60.47%), Postives = 57/86 (66.28%), Query Frame = 1 

Query: 24  DVCEFYGLCDSGEEIFCLYGHPNETWEMVLPV----------------GRDGMDRKYWRP 83
           DV EFYGLCD  +E  CLYGHPNETWE+ LP                  RDGM+RK W  
Sbjct: 31  DVDEFYGLCDPEKENLCLYGHPNETWEVTLPAEEVPPELPEPALGINFARDGMNRKDWLS 90

Query: 84  LVAVHGDSCLLSVAFYFGARLDRSKR 94
           LVAVH DS LLSVAFYFGARL+RS+R
Sbjct: 91  LVAVHSDSWLLSVAFYFGARLNRSER 116

[Close]
BLAST of Csa5G592790 vs. NCBI nr
Match: gi|302398555|gb|ADL36572.1| (ALF domain class transcription factor [Malus domestica])

HSP 1 Score: 101.7 bits (252), Expect = 9.1e-19
Identity = 52/86 (60.47%), Postives = 57/86 (66.28%), Query Frame = 1 

Query: 24  DVCEFYGLCDSGEEIFCLYGHPNETWEMVLPV----------------GRDGMDRKYWRP 83
           DV EFYGLCD  +E  CLYGHPNETWE+ LP                  RDGM+RK W  
Sbjct: 29  DVDEFYGLCDPEKENLCLYGHPNETWEVTLPAEEVPPELPEPALGINFARDGMNRKDWLS 88

Query: 84  LVAVHGDSCLLSVAFYFGARLDRSKR 94
           LVAVH DS LLSVAFYFGARL+RS+R
Sbjct: 89  LVAVHSDSWLLSVAFYFGARLNRSER 114

The following BLAST results are available for this feature:
BLAST of Csa5G592790 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ALFL2_ARATH5.0e-1752.33PHD finger protein ALFIN-LIKE 2 OS=Arabidopsis thaliana GN=AL2 PE=1 SV=1[more]
ALFL2_ORYSI8.5e-1752.33PHD finger protein ALFIN-LIKE 2 OS=Oryza sativa subsp. indica GN=OsI_25444 PE=3 ... [more]
ALFL2_ORYSJ8.5e-1752.33PHD finger protein ALFIN-LIKE 2 OS=Oryza sativa subsp. japonica GN=Os07g0233300 ... [more]
ALFL1_ARATH1.4e-1646.73PHD finger protein ALFIN-LIKE 1 OS=Arabidopsis thaliana GN=AL1 PE=1 SV=1[more]
ALFL6_ORYSJ4.2e-1653.41PHD finger protein ALFIN-LIKE 6 OS=Oryza sativa subsp. japonica GN=Os01g0887700 ... [more]
BLAST of Csa5G592790 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KPZ8_CUCSA1.9e-63100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_5G592790 PE=4 SV=1[more]
A0A0A0L9V8_CUCSA1.3e-1961.63Uncharacterized protein OS=Cucumis sativus GN=Csa_3G731170 PE=4 SV=1[more]
E5GBF1_CUCME1.3e-1961.63Phd/F-box containing protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
D9ZIL9_MALDO6.3e-1960.47ALF domain class transcription factor OS=Malus domestica GN=ALF7 PE=2 SV=1[more]
M5W0X9_PRUPE1.1e-1859.30Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010710mg PE=4 SV=1[more]
BLAST of Csa5G592790 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G11200.12.8e-1852.33 alfin-like 2[more]
AT5G05610.18.2e-1846.73 alfin-like 1[more]
AT2G02470.12.6e-1647.37 alfin-like 6[more]
AT1G14510.13.4e-1645.45 alfin-like 7[more]
AT5G26210.11.0e-1547.31 alfin-like 4[more]
BLAST of Csa5G592790 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700196538|gb|KGN51715.1|2.7e-63100.00hypothetical protein Csa_5G592790 [Cucumis sativus][more]
gi|449439888|ref|XP_004137717.1|1.8e-1961.63PREDICTED: PHD finger protein ALFIN-LIKE 1-like [Cucumis sativus][more]
gi|659083546|ref|XP_008442414.1|1.8e-1961.63PREDICTED: PHD finger protein ALFIN-LIKE 1-like [Cucumis melo][more]
gi|470133445|ref|XP_004302576.1|9.1e-1960.47PREDICTED: PHD finger protein ALFIN-LIKE 1-like [Fragaria vesca subsp. vesca][more]
gi|302398555|gb|ADL36572.1|9.1e-1960.47ALF domain class transcription factor [Malus domestica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR021998Alfin
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0042393histone binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
molecular_function GO:0042393 histone binding
molecular_function GO:0046872 metal ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa5G592790.1Csa5G592790.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021998AlfinPFAMPF12165DUF3594coord: 21..54
score: 1.8E-6coord: 56..95
score: 1.7
NoneNo IPR availablePANTHERPTHR12321CPG BINDING PROTEINcoord: 24..93
score: 1.7
NoneNo IPR availablePANTHERPTHR12321:SF46SUBFAMILY NOT NAMEDcoord: 24..93
score: 1.7

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa5G592790CsGy5G021310Cucumber (Gy14) v2cgybcuB223
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa5G592790Watermelon (97103) v2cuwmbB383
Csa5G592790Watermelon (97103) v2cuwmbB400
Csa5G592790Wax gourdcuwgoB489
Csa5G592790Wax gourdcuwgoB512
Csa5G592790Cucumber (Chinese Long) v2cucuB064
Csa5G592790Cucumber (Gy14) v1cgycuB073
Csa5G592790Cucumber (Gy14) v1cgycuB551
Csa5G592790Cucurbita maxima (Rimu)cmacuB189
Csa5G592790Cucurbita maxima (Rimu)cmacuB413
Csa5G592790Cucurbita maxima (Rimu)cmacuB749
Csa5G592790Cucurbita maxima (Rimu)cmacuB803
Csa5G592790Cucurbita moschata (Rifu)cmocuB173
Csa5G592790Cucurbita moschata (Rifu)cmocuB402
Csa5G592790Cucurbita moschata (Rifu)cmocuB739
Csa5G592790Cucurbita moschata (Rifu)cmocuB793
Csa5G592790Melon (DHL92) v3.5.1cumeB377
Csa5G592790Melon (DHL92) v3.5.1cumeB393
Csa5G592790Watermelon (Charleston Gray)cuwcgB394
Csa5G592790Watermelon (Charleston Gray)cuwcgB411
Csa5G592790Watermelon (97103) v1cuwmB376
Csa5G592790Watermelon (97103) v1cuwmB401
Csa5G592790Cucurbita pepo (Zucchini)cpecuB047
Csa5G592790Cucurbita pepo (Zucchini)cpecuB118
Csa5G592790Cucurbita pepo (Zucchini)cpecuB440
Csa5G592790Cucurbita pepo (Zucchini)cpecuB836
Csa5G592790Bottle gourd (USVL1VR-Ls)culsiB368
Csa5G592790Bottle gourd (USVL1VR-Ls)culsiB388
Csa5G592790Cucumber (Gy14) v2cgybcuB076
Csa5G592790Melon (DHL92) v3.6.1cumedB359
Csa5G592790Melon (DHL92) v3.6.1cumedB376
Csa5G592790Silver-seed gourdcarcuB0271
Csa5G592790Silver-seed gourdcarcuB0530
Csa5G592790Silver-seed gourdcarcuB0648
Csa5G592790Silver-seed gourdcarcuB1084