Csa5G587100 (gene) Cucumber (Chinese Long) v2

NameCsa5G587100
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr5 : 20991750 .. 20991947 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGATCAGAGGTTGGTTGGTGGCCGTCGAAAGTGGTGATCAAAGATCGGTAATTGACTATAAAAGGTTTGTCAATGGAGTCACTAGAGGTGGTGGGTGGAGATTGGCCAACGACGATCATCGAAGGTGGTGTTCAAAAGTTGATCGACCAACATTTCAACCCGTAAAACAAATACTCCTTAGAGTTGAAGAATAG

mRNA sequence

ATGGCGATCAGAGGTTGGTTGGTGGCCGTCGAAAGTGGTGATCAAAGATCGGTAATTGACTATAAAAGGTTTGTCAATGGAGTCACTAGAGGTGGTGGGTGGAGATTGGCCAACGACGATCATCGAAGGTGGTGTTCAAAAGTTGATCGACCAACATTTCAACCCGTAAAACAAATACTCCTTAGAGTTGAAGAATAG

Coding sequence (CDS)

ATGGCGATCAGAGGTTGGTTGGTGGCCGTCGAAAGTGGTGATCAAAGATCGGTAATTGACTATAAAAGGTTTGTCAATGGAGTCACTAGAGGTGGTGGGTGGAGATTGGCCAACGACGATCATCGAAGGTGGTGTTCAAAAGTTGATCGACCAACATTTCAACCCGTAAAACAAATACTCCTTAGAGTTGAAGAATAG

Protein sequence

MAIRGWLVAVESGDQRSVIDYKRFVNGVTRGGGWRLANDDHRRWCSKVDRPTFQPVKQILLRVEE*
BLAST of Csa5G587100 vs. TrEMBL
Match: A0A0A0KRX7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G587100 PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 1.5e-30
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 1

Query: 1  MAIRGWLVAVESGDQRSVIDYKRFVNGVTRGGGWRLANDDHRRWCSKVDRPTFQPVKQIL 60
          MAIRGWLVAVESGDQRSVIDYKRFVNGVTRGGGWRLANDDHRRWCSKVDRPTFQPVKQIL
Sbjct: 1  MAIRGWLVAVESGDQRSVIDYKRFVNGVTRGGGWRLANDDHRRWCSKVDRPTFQPVKQIL 60

Query: 61 LRVEE 66
          LRVEE
Sbjct: 61 LRVEE 65

BLAST of Csa5G587100 vs. NCBI nr
Match: gi|700196462|gb|KGN51639.1| (hypothetical protein Csa_5G587100 [Cucumis sativus])

HSP 1 Score: 139.4 bits (350), Expect = 2.2e-30
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 1

Query: 1  MAIRGWLVAVESGDQRSVIDYKRFVNGVTRGGGWRLANDDHRRWCSKVDRPTFQPVKQIL 60
          MAIRGWLVAVESGDQRSVIDYKRFVNGVTRGGGWRLANDDHRRWCSKVDRPTFQPVKQIL
Sbjct: 1  MAIRGWLVAVESGDQRSVIDYKRFVNGVTRGGGWRLANDDHRRWCSKVDRPTFQPVKQIL 60

Query: 61 LRVEE 66
          LRVEE
Sbjct: 61 LRVEE 65

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KRX7_CUCSA1.5e-30100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_5G587100 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700196462|gb|KGN51639.1|2.2e-30100.00hypothetical protein Csa_5G587100 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa5G587100.1Csa5G587100.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa5G587100CSPI05G21210Wild cucumber (PI 183967)cpicuB252
The following gene(s) are paralogous to this gene:

None