Csa5G585980 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa5G585980
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	DnaJ; contains IPR001623 (DnaJ domain)
Location	Chr5 : 20909760 .. 20912016 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGACGTGGAAGAATGGGAAGCCACGGAGAAATTTGAGAAATGCAGGGCGACGAAGCCAGAACCTTGCTTGGGTTCTCTCCTGGTTCCCGTCCGTCTTCTTCCCAGGTGCAGCTTCTGCATTTACTATTCACTTCAATTCTGATCTCCAACCCTAAGTATGGATTGATTTTTCTGATCGCCAATTGCAGGTTAAAGAAGCTTACAAGAGGATGGTGTGGGATACTCATCCTGACCTCTTCCCTGCTCATCAAAAGCCTCAGGCCGAGTCTAAATTCAAACTGGTAAACATTTTATTTGGGCAATTTTCCTATGAAGCCGTATTGTTTTTACTTTTCATCACAAGTTTAGGACTGATTTTGAAATGGTTCAAGTCAATGTTCAAGATACACATTTCATCACTCAAAATGTTGGTTTGAATGGTTTCCGATTCCGCTTTGTTCGAACTCAATGGATTTTGGCTTTTTGCCCACTTTTTAAAACTTACGAATTTTGATATTAGCCAACATTATCAAAGGAAGAATGCTGAACTATACATTTCTATGTAATCGCTTTTGCCCTTTTTTTTACAACTCATTAAGTGCTGAATCATAAGTTCATGTGTCAAATATTTCCTTTTCATAAGAAGGGAAAATATTTGGTTTGTTTGTTTCTCTTTGAAACTGATGAGGGTACATGGAGATTGATACCCAAGTATTGCCCTTGTAAAAAAAAAACCTTTTAGCTATTTGGAGAGCTGGAATGTAATCAAAGATGTGTTGGAAAGCTTGAGTAATAAAAAATGGAAAGGAAATGAGATGATAGTGAGAGAGAGGTTGGATTGACCCAAAAGGTTTGATCCATGAGTTTTGGATTATCTTATATTACAAACTCATTTTATTACAAGTGGCAAACACCCTTGGTTTTCTCGTAGAGGTATCATTATAGGCTATTAAGGATCATAGTGGTCGAATGTGTCATGGGGTTGCTAGAGTGTCGGCCTCAGATGTGAGGGTCGCCAGAAAGCAACAAGAGCTATCAGAGCATTGGATGTGAAGGTGAGCATTGTAGAGATAAGAGAGCGAGAGGAGATCTGAGATGGGTGAGCGTCTGAAGTGTTGTCAAGGAGAGTGAAAGAGAGGAGATGTGACGTTGGAGAGGAGAGAGCGCGAGAGACCTAATTGCTTGTGATGTTCCATTTTGGTATTTTCATCCTGAAAAAATCTTAAAATTTTAAAACGGTAAAATCTCGTATGATTATTCTAAACACTACAATTGTTCTTTTATAAAACTAATGGTGAATCTGTTTTTTAATTATTACAATGCCTTCTTTTTGCAACTCCATATAGTTAACATTTTGTTATCTGAAAATATATGGCATGTGCTGCAGATTTCCGAAGCTTATTCATGCCTTCTATCCGGTAATTCTCTACTACTAGTCATAGCACACAGATTTTAAACCCGGTGTGAATTGACTTTTTAAGTGTTTGTGTACACTTTTTTTGCACTTGTAAACATTTATCTAAACACTTAGAAAATCAATCAAAATACACCATAAATCTCATAAACTGCAAAAAACTAATACCAAATTTGTGAATAATCTAAATAGCTTACTCCTTACAGGTTCCAGAAATGGAGATTCACATTCAGGTAATGCATAAACAAATCCTTCTTAGTTCTCCTGTTAGTCCATTCTAGGGTATGATTTGATGAGACGTTCTGGACAGCTACATATGAAAGAGTTGTTAGAAGGGGAGTTCCTGTTTCACATGGAGGAAGAAGAAACCATGCTTTAATCAAACTTCCATTTCTGTTACTCATTCTGGGGACTGTGTCACTGGGAGGACTAAATGTTTCGAGGTCAGTTTTAAGCATCAACATGGTATGATATATAATAGAATTCTATGGTTTGTTTTAAGGAGTTAGATTGCATTATTCAGGGCTTACAAGAAGCAGAAGGAAACGTATCCTTCTCACAATCCTTTTCTTCCTTGAGGCCAAGAATGATGTAAAAAGCAAAAGTTTCTGAGGTTATGTCCTTTGTTTGTGCTATCGGAAGGAACAAGAAAGACAATGATGGTTGCGAAGTTACATGGCCCAAGTTAGTTGAGTGTAAATTTGTTAGGGCTTTCTACACATATACATATAGCATATATATTACTTATAATTCGAGTGTCGATTATTTTACTTTAGTTTGGAAAGAAAATAAAAGTAAAATTTACTTAAAGTTGTATTGATTGTGCTAATTGAGAAATACAAAATAAACTAATATTGATTGCAG

mRNA sequence

ATGCAGGGCGACGAAGCCAGAACCTTGCTTGGGTTCTCTCCTGGTTCCCGTCCGTCTTCTTCCCAGGTTAAAGAAGCTTACAAGAGGATGGTGTGGGATACTCATCCTGACCTCTTCCCTGCTCATCAAAAGCCTCAGGCCGAGTCTAAATTCAAACTGATTTCCGAAGCTTATTCATGCCTTCTATCCGGTTCCAGAAATGGAGATTCACATTCAGCTACATATGAAAGAGTTGTTAGAAGGGGAGTTCCTGTTTCACATGGAGGAAGAAGAAACCATGCTTTAATCAAACTTCCATTTCTGTTACTCATTCTGGGGACTGTGTCACTGGGAGGACTAAATGTTTCGAGGGCTTACAAGAAGCAGAAGGAAACGTATCCTTCTCACAATCCTTTTCTTCCTTGA

Coding sequence (CDS)

ATGCAGGGCGACGAAGCCAGAACCTTGCTTGGGTTCTCTCCTGGTTCCCGTCCGTCTTCTTCCCAGGTTAAAGAAGCTTACAAGAGGATGGTGTGGGATACTCATCCTGACCTCTTCCCTGCTCATCAAAAGCCTCAGGCCGAGTCTAAATTCAAACTGATTTCCGAAGCTTATTCATGCCTTCTATCCGGTTCCAGAAATGGAGATTCACATTCAGCTACATATGAAAGAGTTGTTAGAAGGGGAGTTCCTGTTTCACATGGAGGAAGAAGAAACCATGCTTTAATCAAACTTCCATTTCTGTTACTCATTCTGGGGACTGTGTCACTGGGAGGACTAAATGTTTCGAGGGCTTACAAGAAGCAGAAGGAAACGTATCCTTCTCACAATCCTTTTCTTCCTTGA

Protein sequence

MQGDEARTLLGFSPGSRPSSSQVKEAYKRMVWDTHPDLFPAHQKPQAESKFKLISEAYSCLLSGSRNGDSHSATYERVVRRGVPVSHGGRRNHALIKLPFLLLILGTVSLGGLNVSRAYKKQKETYPSHNPFLP*

Homology

[Close]

BLAST of Csa5G585980 vs. TrEMBL
Match: A0A0A0KRW5_CUCSA (Heat shock protein DnaJ, N-terminal OS=Cucumis sativus GN=Csa_5G585980 PE=4 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 4.8e-71
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 1


Query: 1   MQGDEARTLLGFSPGSRPSSSQVKEAYKRMVWDTHPDLFPAHQKPQAESKFKLISEAYSC 60
           MQGDEARTLLGFSPGSRPSSSQVKEAYKRMVWDTHPDLFPAHQKPQAESKFKLISEAYSC
Sbjct: 1   MQGDEARTLLGFSPGSRPSSSQVKEAYKRMVWDTHPDLFPAHQKPQAESKFKLISEAYSC 60

Query: 61  LLSGSRNGDSHSATYERVVRRGVPVSHGGRRNHALIKLPFLLLILGTVSLGGLNVSRAYK 120
           LLSGSRNGDSHSATYERVVRRGVPVSHGGRRNHALIKLPFLLLILGTVSLGGLNVSRAYK
Sbjct: 61  LLSGSRNGDSHSATYERVVRRGVPVSHGGRRNHALIKLPFLLLILGTVSLGGLNVSRAYK 120

Query: 121 KQKETYPSHNPFLP 135
           KQKETYPSHNPFLP
Sbjct: 121 KQKETYPSHNPFLP 134

[Close]

BLAST of Csa5G585980 vs. TrEMBL
Match: A4PU34_MEDTR (Chaperone DnaJ domain protein OS=Medicago truncatula GN=MTR_7g110410 PE=2 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 1.8e-49
Identity = 97/134 (72.39%), Postives = 111/134 (82.84%), Query Frame = 1


Query: 1   MQGDEARTLLGFSPGSRPSSSQVKEAYKRMVWDTHPDLFPAHQKPQAESKFKLISEAYSC 60
           M  +EAR LLGF P S PS SQVK AYK+ VW++HPDLFP+H+KP AESKFKLISEAY+C
Sbjct: 1   MDANEARILLGFPPNSNPSPSQVKSAYKQKVWESHPDLFPSHEKPHAESKFKLISEAYTC 60

Query: 61  LLSGSRNGDSHSATYERVVRRGVPVSHGGRRNHALIKLPFLLLILGTVSLGGLNVSRAYK 120
           LL G R   S SA Y RVVR GVP ++GGR+NHA+IK+PFLLLILGTV+LGG N SRAYK
Sbjct: 61  LLPGGRGEASTSAEYWRVVRTGVPRANGGRKNHAMIKVPFLLLILGTVALGGFNASRAYK 120

Query: 121 KQKETYPSHNPFLP 135
           +QKE YPSHNPFLP
Sbjct: 121 RQKEDYPSHNPFLP 134

[Close]

BLAST of Csa5G585980 vs. TrEMBL
Match: C6T4E2_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_03G223300 PE=2 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 3.4e-48
Identity = 94/135 (69.63%), Postives = 110/135 (81.48%), Query Frame = 1


Query: 1   MQGDEARTLLGFSPGSRPSSSQVKEAYKRMVWDTHPDLFPAHQKPQAESKFKLISEAYSC 60
           M  DEA+ LLGF P SRP+ SQVK AYK+ VW++HPDLFP+H+KP AESKFKLISEAY+C
Sbjct: 1   MDADEAKILLGFPPNSRPTPSQVKSAYKKKVWESHPDLFPSHEKPLAESKFKLISEAYTC 60

Query: 61  LLSGSRNGDSHSA-TYERVVRRGVPVSHGGRRNHALIKLPFLLLILGTVSLGGLNVSRAY 120
           L SG R G S S   Y  VVR G P +HGGR+NHA+IK+PFLL+ILGT++LGG N SRAY
Sbjct: 61  LESGGRGGASSSVDQYSHVVRTGFPRAHGGRKNHAMIKVPFLLIILGTLALGGFNASRAY 120

Query: 121 KKQKETYPSHNPFLP 135
           KKQK+ YPSHNPFLP
Sbjct: 121 KKQKDEYPSHNPFLP 135

[Close]

BLAST of Csa5G585980 vs. TrEMBL
Match: I3SMA7_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 8.3e-47
Identity = 91/134 (67.91%), Postives = 108/134 (80.60%), Query Frame = 1


Query: 1   MQGDEARTLLGFSPGSRPSSSQVKEAYKRMVWDTHPDLFPAHQKPQAESKFKLISEAYSC 60
           M  ++AR LLGF P S P+ SQVK AYK+ VW++HPDLFP+H+KP AESKFKLISEAY+C
Sbjct: 1   MDANDARILLGFPPNSHPTPSQVKSAYKKKVWESHPDLFPSHEKPLAESKFKLISEAYAC 60

Query: 61  LLSGSRNGDSHSATYERVVRRGVPVSHGGRRNHALIKLPFLLLILGTVSLGGLNVSRAYK 120
           LL G R   S S  Y RVVR GVP + GGR+NHA+IK+PF+ LILGTV+LGG N SRAY+
Sbjct: 61  LLPGGREASS-SVEYSRVVRTGVPRAQGGRKNHAMIKVPFIFLILGTVTLGGFNASRAYR 120

Query: 121 KQKETYPSHNPFLP 135
           +QKE YPSHNPFLP
Sbjct: 121 RQKEAYPSHNPFLP 133

[Close]

BLAST of Csa5G585980 vs. TrEMBL
Match: A0A0V0H5H6_SOLCH (Putative dnaJ subfamily B member 6-B-like OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 4.3e-43
Identity = 88/132 (66.67%), Postives = 102/132 (77.27%), Query Frame = 1


Query: 4   DEARTLLGFSPGSRPSSSQVKEAYKRMVWDTHPDLFPAHQKPQAESKFKLISEAYSCLLS 63
           DEA+ LLGF   S P++SQVK AY+R VW+THPD FP H KP AE KFK+ISEAY+CLLS
Sbjct: 4   DEAKLLLGFPTNSCPNASQVKAAYRRKVWETHPDCFPVHLKPNAELKFKMISEAYTCLLS 63

Query: 64  GSRNGDSHSATYERVVRRGVP-VSHGGRRNHALIKLPFLLLILGTVSLGGLNVSRAYKKQ 123
           G+R    H   Y RVVR GVP    GGRRNHALI LPFL +ILGT +LGG+NV+R+Y+KQ
Sbjct: 64  GARQEGEHVVGYSRVVRSGVPRGGGGGRRNHALIGLPFLFIILGTAALGGINVARSYRKQ 123

Query: 124 KETYPSHNPFLP 135
           K  YPSHNPFLP
Sbjct: 124 KADYPSHNPFLP 135

[Close]

BLAST of Csa5G585980 vs. TAIR10
Match: AT3G62190.1 (AT3G62190.1 Chaperone DnaJ-domain superfamily protein)

HSP 1 Score: 156.0 bits (393), Expect = 1.7e-38
Identity = 80/138 (57.97%), Postives = 95/138 (68.84%), Query Frame = 1


Query: 1   MQGDEARTLLGFSPGSRPSSSQVKEAYKRMVWDTHPDLFPAHQKPQAESKFKLISEAYSC 60
           M+ +EA+ LLGF P SRP  SQVK AY++ VW++HPDLFP  QK  AESKFK ISEAYSC
Sbjct: 1   MEVEEAKILLGFPPNSRPDPSQVKAAYRKKVWESHPDLFPDDQKLVAESKFKSISEAYSC 60

Query: 61  LLSGSRNGDSH--SATYERVVRRGV--PVSHGGRRNHALIKLPFLLLILGTVSLGGLNVS 120
           L SG   G  +  +  Y RVV+ GV  P S   R N  LI  PFLL++LGT+ LGG+  +
Sbjct: 61  LESGDVKGQWYYRAGVYSRVVKTGVPRPYSSAKRGNRWLIGAPFLLIVLGTIGLGGIKAN 120

Query: 121 RAYKKQKETYPSHNPFLP 135
           RAY  QK+T+PSHNPFLP
Sbjct: 121 RAYNLQKQTFPSHNPFLP 138

[Close]

BLAST of Csa5G585980 vs. NCBI nr
Match: gi|449435144|ref|XP_004135355.1| (PREDICTED: uncharacterized protein LOC101221514 [Cucumis sativus])

HSP 1 Score: 275.0 bits (702), Expect = 6.9e-71
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 1


Query: 1   MQGDEARTLLGFSPGSRPSSSQVKEAYKRMVWDTHPDLFPAHQKPQAESKFKLISEAYSC 60
           MQGDEARTLLGFSPGSRPSSSQVKEAYKRMVWDTHPDLFPAHQKPQAESKFKLISEAYSC
Sbjct: 1   MQGDEARTLLGFSPGSRPSSSQVKEAYKRMVWDTHPDLFPAHQKPQAESKFKLISEAYSC 60

Query: 61  LLSGSRNGDSHSATYERVVRRGVPVSHGGRRNHALIKLPFLLLILGTVSLGGLNVSRAYK 120
           LLSGSRNGDSHSATYERVVRRGVPVSHGGRRNHALIKLPFLLLILGTVSLGGLNVSRAYK
Sbjct: 61  LLSGSRNGDSHSATYERVVRRGVPVSHGGRRNHALIKLPFLLLILGTVSLGGLNVSRAYK 120

Query: 121 KQKETYPSHNPFLP 135
           KQKETYPSHNPFLP
Sbjct: 121 KQKETYPSHNPFLP 134

[Close]

BLAST of Csa5G585980 vs. NCBI nr
Match: gi|659090347|ref|XP_008445967.1| (PREDICTED: dnaJ protein homolog 1 [Cucumis melo])

HSP 1 Score: 270.0 bits (689), Expect = 2.2e-69
Identity = 131/134 (97.76%), Postives = 133/134 (99.25%), Query Frame = 1


Query: 1   MQGDEARTLLGFSPGSRPSSSQVKEAYKRMVWDTHPDLFPAHQKPQAESKFKLISEAYSC 60
           M+GDEARTLLGFSPGSRPSSSQVKEAYKRMVWDTHPDLFPAHQKPQAESKFKLISEAYSC
Sbjct: 1   MRGDEARTLLGFSPGSRPSSSQVKEAYKRMVWDTHPDLFPAHQKPQAESKFKLISEAYSC 60

Query: 61  LLSGSRNGDSHSATYERVVRRGVPVSHGGRRNHALIKLPFLLLILGTVSLGGLNVSRAYK 120
           LLSGSRNGDSHSATYERVVRRGVPVSHGGRRNHALIKLPFLLLILGTVSLGGLNVSRAYK
Sbjct: 61  LLSGSRNGDSHSATYERVVRRGVPVSHGGRRNHALIKLPFLLLILGTVSLGGLNVSRAYK 120

Query: 121 KQKETYPSHNPFLP 135
           +QKE YPSHNPFLP
Sbjct: 121 RQKEMYPSHNPFLP 134

[Close]

BLAST of Csa5G585980 vs. NCBI nr
Match: gi|823124431|ref|XP_012480121.1| (PREDICTED: uncharacterized protein LOC105795160 isoform X1 [Gossypium raimondii])

HSP 1 Score: 208.4 bits (529), Expect = 7.9e-51
Identity = 96/134 (71.64%), Postives = 112/134 (83.58%), Query Frame = 1


Query: 1   MQGDEARTLLGFSPGSRPSSSQVKEAYKRMVWDTHPDLFPAHQKPQAESKFKLISEAYSC 60
           MQGDEAR LLGF P SRPS SQ+K AY++ VW++HPDLFP H+K  AESKFKLI+EAY+C
Sbjct: 1   MQGDEARLLLGFPPNSRPSPSQIKAAYRKKVWESHPDLFPVHEKHSAESKFKLIAEAYTC 60

Query: 61  LLSGSRNGDSHSATYERVVRRGVPVSHGGRRNHALIKLPFLLLILGTVSLGGLNVSRAYK 120
           L SGS  G S+SATY  VVR GVP +HGGRRN  LI++PFLL++LGTV LGGLN +RAY+
Sbjct: 61  LQSGSGRGGSYSATYSHVVRTGVPKAHGGRRNRGLIQIPFLLIVLGTVGLGGLNATRAYR 120

Query: 121 KQKETYPSHNPFLP 135
           KQKE YPSHNPFLP
Sbjct: 121 KQKEAYPSHNPFLP 134

[Close]

BLAST of Csa5G585980 vs. NCBI nr
Match: gi|357511509|ref|XP_003626043.1| (chaperone DnaJ domain protein [Medicago truncatula])

HSP 1 Score: 203.4 bits (516), Expect = 2.6e-49
Identity = 97/134 (72.39%), Postives = 111/134 (82.84%), Query Frame = 1


Query: 1   MQGDEARTLLGFSPGSRPSSSQVKEAYKRMVWDTHPDLFPAHQKPQAESKFKLISEAYSC 60
           M  +EAR LLGF P S PS SQVK AYK+ VW++HPDLFP+H+KP AESKFKLISEAY+C
Sbjct: 1   MDANEARILLGFPPNSNPSPSQVKSAYKQKVWESHPDLFPSHEKPHAESKFKLISEAYTC 60

Query: 61  LLSGSRNGDSHSATYERVVRRGVPVSHGGRRNHALIKLPFLLLILGTVSLGGLNVSRAYK 120
           LL G R   S SA Y RVVR GVP ++GGR+NHA+IK+PFLLLILGTV+LGG N SRAYK
Sbjct: 61  LLPGGRGEASTSAEYWRVVRTGVPRANGGRKNHAMIKVPFLLLILGTVALGGFNASRAYK 120

Query: 121 KQKETYPSHNPFLP 135
           +QKE YPSHNPFLP
Sbjct: 121 RQKEDYPSHNPFLP 134

[Close]

BLAST of Csa5G585980 vs. NCBI nr
Match: gi|1021524622|ref|XP_016205696.1| (PREDICTED: uncharacterized protein LOC107646027 [Arachis ipaensis])

HSP 1 Score: 203.4 bits (516), Expect = 2.6e-49
Identity = 95/134 (70.90%), Postives = 110/134 (82.09%), Query Frame = 1


Query: 1   MQGDEARTLLGFSPGSRPSSSQVKEAYKRMVWDTHPDLFPAHQKPQAESKFKLISEAYSC 60
           M  +EAR LLGF P +RP++SQVK AYK+ VW++HPDLFP H+KP AES+FKLISEAY+C
Sbjct: 1   MDANEARILLGFPPNTRPTTSQVKSAYKKKVWESHPDLFPTHEKPLAESRFKLISEAYAC 60

Query: 61  LLSGSRNGDSHSATYERVVRRGVPVSHGGRRNHALIKLPFLLLILGTVSLGGLNVSRAYK 120
           LLSG R G S S  Y RVVR GVP S GG +NHALIK+PF+ +ILGTV+LGG N SRAYK
Sbjct: 61  LLSGGRGGISDSVQYSRVVRTGVPRSQGGSKNHALIKVPFICIILGTVALGGFNASRAYK 120

Query: 121 KQKETYPSHNPFLP 135
           KQKE YPSHNPFLP
Sbjct: 121 KQKEEYPSHNPFLP 134

The following BLAST results are available for this feature:

BLAST of Csa5G585980 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KRW5_CUCSA	4.8e-71	100.00	Heat shock protein DnaJ, N-terminal OS=Cucumis sativus GN=Csa_5G585980 PE=4 SV=1	[more]
A4PU34_MEDTR	1.8e-49	72.39	Chaperone DnaJ domain protein OS=Medicago truncatula GN=MTR_7g110410 PE=2 SV=1	[more]
C6T4E2_SOYBN	3.4e-48	69.63	Uncharacterized protein OS=Glycine max GN=GLYMA_03G223300 PE=2 SV=1	[more]
I3SMA7_LOTJA	8.3e-47	67.91	Uncharacterized protein OS=Lotus japonicus PE=2 SV=1	[more]
A0A0V0H5H6_SOLCH	4.3e-43	66.67	Putative dnaJ subfamily B member 6-B-like OS=Solanum chacoense PE=4 SV=1	[more]

BLAST of Csa5G585980 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G62190.1	1.7e-38	57.97	Chaperone DnaJ-domain superfamily protein	[more]

BLAST of Csa5G585980 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449435144\|ref\|XP_004135355.1\|	6.9e-71	100.00	PREDICTED: uncharacterized protein LOC101221514 [Cucumis sativus]	[more]
gi\|659090347\|ref\|XP_008445967.1\|	2.2e-69	97.76	PREDICTED: dnaJ protein homolog 1 [Cucumis melo]	[more]
gi\|823124431\|ref\|XP_012480121.1\|	7.9e-51	71.64	PREDICTED: uncharacterized protein LOC105795160 isoform X1 [Gossypium raimondii]	[more]
gi\|357511509\|ref\|XP_003626043.1\|	2.6e-49	72.39	chaperone DnaJ domain protein [Medicago truncatula]	[more]
gi\|1021524622\|ref\|XP_016205696.1\|	2.6e-49	70.90	PREDICTED: uncharacterized protein LOC107646027 [Arachis ipaensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001623	DnaJ_domain

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048573	photoperiodism, flowering
biological_process	GO:0006412	translation
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005840	ribosome
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003735	structural constituent of ribosome

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU094305	cucumber EST collection version 3.0	transcribed_cluster
CU107072	cucumber EST collection version 3.0	transcribed_cluster
CU110132	cucumber EST collection version 3.0	transcribed_cluster
CU164736	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa5G585980.1	Csa5G585980.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU107072	CU107072	transcribed_cluster
CU094305	CU094305	transcribed_cluster
CU110132	CU110132	transcribed_cluster
CU164736	CU164736	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001623	DnaJ domain	GENE3D	G3DSA:1.10.287.110		coord: 18..61 score: 2.2
IPR001623	DnaJ domain	PFAM	PF00226	DnaJ	coord: 10..62 score: 1.
IPR001623	DnaJ domain	SMART	SM00271	dnaj_3	coord: 4..66 score: 6.
IPR001623	DnaJ domain	PROFILE	PS50076	DNAJ_2	coord: 5..79 score: 12
IPR001623	DnaJ domain	unknown	SSF46565	Chaperone J-domain	coord: 9..65 score: 1.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa5G585980	Cla022925	Watermelon (97103) v1	cuwmB432
Csa5G585980	ClCG11G013240	Watermelon (Charleston Gray)	cuwcgB352
Csa5G585980	Lsi04G007220	Bottle gourd (USVL1VR-Ls)	culsiB368
Csa5G585980	MELO3C034050.2	Melon (DHL92) v3.6.1	cumedB359
Csa5G585980	Cla97C11G219150	Watermelon (97103) v2	cuwmbB357
Csa5G585980	Bhi07G000998	Wax gourd	cuwgoB502
Csa5G585980	CSPI05G20950	Wild cucumber (PI 183967)	cpicuB239
Csa5G585980	Cucsa.076170	Cucumber (Gy14) v1	cgycuB073
Csa5G585980	CmaCh18G006710	Cucurbita maxima (Rimu)	cmacuB413
Csa5G585980	CmoCh18G006520	Cucurbita moschata (Rifu)	cmocuB407
Csa5G585980	Cp4.1LG09g05680	Cucurbita pepo (Zucchini)	cpecuB047
Csa5G585980	CsGy5G020470	Cucumber (Gy14) v2	cgybcuB223
Csa5G585980	Carg21203	Silver-seed gourd	carcuB0713

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa5G585980	Cucurbita maxima (Rimu)	cmacuB726
Csa5G585980	Cucurbita maxima (Rimu)	cmacuB749
Csa5G585980	Cucurbita moschata (Rifu)	cmocuB739
Csa5G585980	Melon (DHL92) v3.5.1	cumeB377
Csa5G585980	Cucurbita pepo (Zucchini)	cpecuB042
Csa5G585980	Cucurbita pepo (Zucchini)	cpecuB440
Csa5G585980	Silver-seed gourd	carcuB0385
Csa5G585980	Silver-seed gourd	carcuB0741