Csa5G571540 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa5G571540
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Unknown protein
Location	Chr5 : 19987385 .. 19987867 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCAGCGAAGTTATGGGAGATGGCCGGAGGCGGGCCTTAGCGCTGCAACTTCTTGACCTTGTACGTGACTTTGTTCTGATGTCAGGGAGGTCGATCGCTGGCGCTGGAGACACTATGAAGAAAGATTGCACCGATCTCATTCGTCGGATCGCCCTCCTGGTCCATCTGGCGGAGGAGATCACAAACTTCTGTAGTGGCAGCTGGGACAATTTTGAGAAATCGAATGATGATGGGTCTTCTTCTTCTTCTTTATCTTCTTGGTTGGATTGCCTTTCGGAAGTGGTTGGAGCAATTCAGGCGGCGAAGCGGCTTCTGTACACGGCTTTGACTTTCTCTCCAAACGACGAGGAGGGTTGTGTGACTTCGACGGTGAGTTCATCTTGTCTTTCTGTTATAGCTTACAATTGTTTGTGTTTGGATTGGAAAATCAACAGACCTAGAAGTGTAACTTCCATTGATGTAATAAGTCTGCACTTTTGA

mRNA sequence

ATGAGCAGCGAAGTTATGGGAGATGGCCGGAGGCGGGCCTTAGCGCTGCAACTTCTTGACCTTGTACGTGACTTTGTTCTGATGTCAGGGAGGTCGATCGCTGGCGCTGGAGACACTATGAAGAAAGATTGCACCGATCTCATTCGTCGGATCGCCCTCCTGGTCCATCTGGCGGAGGAGATCACAAACTTCTGTAGTGGCAGCTGGGACAATTTTGAGAAATCGAATGATGATGGGTCTTCTTCTTCTTCTTTATCTTCTTGGTTGGATTGCCTTTCGGAAGTGGTTGGAGCAATTCAGGCGGCGAAGCGGCTTCTGTACACGGCTTTGACTTTCTCTCCAAACGACGAGGAGGGTTGTGTGACTTCGACGGTGAGTTCATCTTGTCTTTCTGTTATAGCTTACAATTGTTTGTGTTTGGATTGGAAAATCAACAGACCTAGAAGTGTAACTTCCATTGATGTAATAAGTCTGCACTTTTGA

Coding sequence (CDS)

ATGAGCAGCGAAGTTATGGGAGATGGCCGGAGGCGGGCCTTAGCGCTGCAACTTCTTGACCTTGTACGTGACTTTGTTCTGATGTCAGGGAGGTCGATCGCTGGCGCTGGAGACACTATGAAGAAAGATTGCACCGATCTCATTCGTCGGATCGCCCTCCTGGTCCATCTGGCGGAGGAGATCACAAACTTCTGTAGTGGCAGCTGGGACAATTTTGAGAAATCGAATGATGATGGGTCTTCTTCTTCTTCTTTATCTTCTTGGTTGGATTGCCTTTCGGAAGTGGTTGGAGCAATTCAGGCGGCGAAGCGGCTTCTGTACACGGCTTTGACTTTCTCTCCAAACGACGAGGAGGGTTGTGTGACTTCGACGGTGAGTTCATCTTGTCTTTCTGTTATAGCTTACAATTGTTTGTGTTTGGATTGGAAAATCAACAGACCTAGAAGTGTAACTTCCATTGATGTAATAAGTCTGCACTTTTGA

Protein sequence

MSSEVMGDGRRRALALQLLDLVRDFVLMSGRSIAGAGDTMKKDCTDLIRRIALLVHLAEEITNFCSGSWDNFEKSNDDGSSSSSLSSWLDCLSEVVGAIQAAKRLLYTALTFSPNDEEGCVTSTVSSSCLSVIAYNCLCLDWKINRPRSVTSIDVISLHF*

Homology

[Close]

BLAST of Csa5G571540 vs. Swiss-Prot
Match: PUB10_ARATH (U-box domain-containing protein 10 OS=Arabidopsis thaliana GN=PUB10 PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 4.5e-08
Identity = 41/114 (35.96%), Postives = 54/114 (47.37%), Query Frame = 1


Query: 33  IAGAGDTMKKDCTDLIRRIALLVHLAEEITNFCSGSWDNFEKSNDDGSSSSSLSSWLDCL 92
           I G     KKDC+DL RR+ LL HL EEI        D+   S  D SSS + S   D  
Sbjct: 21  IPGNFGLFKKDCSDLARRVGLLTHLIEEIR-------DSSPPSESDASSSLN-SHECDWW 80

Query: 93  SEVVGAIQAAKRLLYTALTFSPNDEEGCVTSTVSSSCLSVIAYNCLCLDWKINR 147
           S++V  +QAAKRLL +A +F   +         S      I++   C+ WK+ +
Sbjct: 81  SDLVVGLQAAKRLLSSATSFQARES--------SDGAAKRISFQFQCVTWKLEK 118

[Close]

BLAST of Csa5G571540 vs. Swiss-Prot
Match: PUB11_ARATH (U-box domain-containing protein 11 OS=Arabidopsis thaliana GN=PUB11 PE=2 SV=2)

HSP 1 Score: 58.9 bits (141), Expect = 5.8e-08
Identity = 48/141 (34.04%), Postives = 61/141 (43.26%), Query Frame = 1


Query: 18  LLDLVRDFVLMSGRSIAGAGDTMKKDCTDLIRRIALLVHLAEEITNFCSGSWDNFEKSND 77
           LLDL+ D V      I       KKDC DL RR+ LL HL EEI +             D
Sbjct: 11  LLDLIADIV-----EIPLNTGMFKKDCADLTRRVCLLTHLLEEIRD---------STPID 70

Query: 78  DGSSSSSLSSWLDCLSEVVGAIQAAKRLLYTALTFSPNDEEGCVTSTVSSSCLSVIAYNC 137
             +SSSS + W    S++V  +QAAKRLL TA  F   D         S      I++  
Sbjct: 71  SAASSSSENDW---WSDLVVGLQAAKRLLSTA-RFQARDS--------SDGAAKRISFQF 125

Query: 138 LCLDWKINRPRSVTSIDVISL 159
            C+ WK+ +  S    D+  +
Sbjct: 131 QCVTWKLEKALSNLPYDLYDI 125

[Close]

BLAST of Csa5G571540 vs. TrEMBL
Match: A0A0A0KUY9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G571540 PE=4 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 2.0e-84
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 1


Query: 1   MSSEVMGDGRRRALALQLLDLVRDFVLMSGRSIAGAGDTMKKDCTDLIRRIALLVHLAEE 60
           MSSEVMGDGRRRALALQLLDLVRDFVLMSGRSIAGAGDTMKKDCTDLIRRIALLVHLAEE
Sbjct: 1   MSSEVMGDGRRRALALQLLDLVRDFVLMSGRSIAGAGDTMKKDCTDLIRRIALLVHLAEE 60

Query: 61  ITNFCSGSWDNFEKSNDDGSSSSSLSSWLDCLSEVVGAIQAAKRLLYTALTFSPNDEEGC 120
           ITNFCSGSWDNFEKSNDDGSSSSSLSSWLDCLSEVVGAIQAAKRLLYTALTFSPNDEEGC
Sbjct: 61  ITNFCSGSWDNFEKSNDDGSSSSSLSSWLDCLSEVVGAIQAAKRLLYTALTFSPNDEEGC 120

Query: 121 VTSTVSSSCLSVIAYNCLCLDWKINRPRSVTSIDVISLHF 161
           VTSTVSSSCLSVIAYNCLCLDWKINRPRSVTSIDVISLHF
Sbjct: 121 VTSTVSSSCLSVIAYNCLCLDWKINRPRSVTSIDVISLHF 160

[Close]

BLAST of Csa5G571540 vs. TrEMBL
Match: F6HFJ0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g04770 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 2.3e-11
Identity = 54/130 (41.54%), Postives = 69/130 (53.08%), Query Frame = 1


Query: 17  QLLDLVRDFVLMSGRSIAGAGDTMKKDCTDLIRRIALLVHLAEEITNFCSGSWDNFEKSN 76
           +LL LV D V +S     G G   K+DCTDL+RRIALL HL EEI +F +G      +  
Sbjct: 6   ELLALVNDVVGVS----VGFGGVFKRDCTDLVRRIALLTHLFEEIRDFGAGL-----RPL 65

Query: 77  DDGSSSSSLSSWLDCLSEVVGAIQAAKRLLYTALTFSPNDEEGCVTSTVSSSCLSVIAYN 136
           D  +SS+S    L CLSEV  A+QAAKRLL  A  FS        +   S      I + 
Sbjct: 66  DVSTSSASP---LTCLSEVANALQAAKRLLSAAGNFS--------SDAFSDGAAKKITFQ 115

Query: 137 CLCLDWKINR 147
             C+ WK+ +
Sbjct: 126 FQCVTWKLEK 115

[Close]

BLAST of Csa5G571540 vs. TrEMBL
Match: A0A067L0L5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04683 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.5e-10
Identity = 53/135 (39.26%), Postives = 71/135 (52.59%), Query Frame = 1


Query: 13  ALALQLLDLVRDFV-LMSGRSIAGAGDTMKKDCTDLIRRIALLVHLAEEITNFCSGSWDN 72
           A A  LL+LV + + + +G  I       +KDC DL+RRI+LL HL EEI ++ S     
Sbjct: 15  APAALLLELVGEIIGMFAGIGIIDRDLVFRKDCMDLVRRISLLTHLLEEIRDYKS----- 74

Query: 73  FEKSNDDGSSSSSLSSWLDCLSEVVGAIQAAKRLLYTALTFSPNDEEGCVTSTVSSSCLS 132
            E    D SSS S SS   C S++ GA+QAAKRLL  A TF  N+         S     
Sbjct: 75  -ESGPLDASSSCSSSSGNWC-SDLFGALQAAKRLLSVAATFKSNNN--------SDGAAK 134

Query: 133 VIAYNCLCLDWKINR 147
            IA+   C+ WK+ +
Sbjct: 135 KIAFQFQCVTWKLEK 134

[Close]

BLAST of Csa5G571540 vs. TrEMBL
Match: A0A0D2MCL0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G180200 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 4.3e-10
Identity = 58/147 (39.46%), Postives = 76/147 (51.70%), Query Frame = 1


Query: 1   MSSEVMGDGRRRALALQLLDLVRDFVLMSGRSIAGAGDTMKKDCTDLIRRIALLVHLAEE 60
           M++ V+ D    A A  LL LV D VL  G   AG     KKDCTDL+RRIAL  HL EE
Sbjct: 1   MAAGVISD----ASAAFLLSLVHDIVL--GDLAAGM---FKKDCTDLVRRIALFTHLLEE 60

Query: 61  ITNFCSGSWDNFEKSNDDGSSSSSLSSWLDCLSEVVGAIQAAKRLLYTALT-FSPNDEEG 120
           I +F +    +   S+   SSSSS SSW    +++  A+QAAKRLL  A    S N  +G
Sbjct: 61  IRDFAASDHPHASSSSSSSSSSSS-SSW---SADLAVALQAAKRLLSAASAHHSVNSSDG 120

Query: 121 CVTSTVSSSCLSVIAYNCLCLDWKINR 147
                        I++   C+ WK+ +
Sbjct: 121 AAKR---------ISFQFQCVTWKLEK 125

[Close]

BLAST of Csa5G571540 vs. TrEMBL
Match: M5XAP4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002756mg PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 4.3e-10
Identity = 49/129 (37.98%), Postives = 69/129 (53.49%), Query Frame = 1


Query: 18  LLDLVRDFVLMSGRSIAGAGDTMKKDCTDLIRRIALLVHLAEEITNFCSGSWDNFEKSND 77
           LL L+ D V+ S    AG+    KKDCTDL+RRIALL HL EEI  F    +   + S  
Sbjct: 15  LLQLLNDVVVASKGCRAGS---FKKDCTDLVRRIALLTHLFEEIRLFKGREFGPLDAST- 74

Query: 78  DGSSSSSLSSWLDCLSEVVGAIQAAKRLLYTALTFSPNDEEGCVTSTVSSSCLSVIAYNC 137
             ++SSS  SW    S++V A+Q AKRL++ A  F+ N     V    +      I++  
Sbjct: 75  SSTNSSSRESW---ASDLVVALQGAKRLVFLATNFTSNSTPS-VPVNHNDEASKKISFQF 134

Query: 138 LCLDWKINR 147
            C+ WK+ +
Sbjct: 135 QCVTWKLEK 135

[Close]

BLAST of Csa5G571540 vs. TAIR10
Match: AT1G71020.1 (AT1G71020.1 ARM repeat superfamily protein)

HSP 1 Score: 59.3 bits (142), Expect = 2.5e-09
Identity = 41/114 (35.96%), Postives = 54/114 (47.37%), Query Frame = 1


Query: 33  IAGAGDTMKKDCTDLIRRIALLVHLAEEITNFCSGSWDNFEKSNDDGSSSSSLSSWLDCL 92
           I G     KKDC+DL RR+ LL HL EEI        D+   S  D SSS + S   D  
Sbjct: 21  IPGNFGLFKKDCSDLARRVGLLTHLIEEIR-------DSSPPSESDASSSLN-SHECDWW 80

Query: 93  SEVVGAIQAAKRLLYTALTFSPNDEEGCVTSTVSSSCLSVIAYNCLCLDWKINR 147
           S++V  +QAAKRLL +A +F   +         S      I++   C+ WK+ +
Sbjct: 81  SDLVVGLQAAKRLLSSATSFQARES--------SDGAAKRISFQFQCVTWKLEK 118

[Close]

BLAST of Csa5G571540 vs. TAIR10
Match: AT1G23030.1 (AT1G23030.1 ARM repeat superfamily protein)

HSP 1 Score: 58.9 bits (141), Expect = 3.3e-09
Identity = 48/141 (34.04%), Postives = 61/141 (43.26%), Query Frame = 1


Query: 18  LLDLVRDFVLMSGRSIAGAGDTMKKDCTDLIRRIALLVHLAEEITNFCSGSWDNFEKSND 77
           LLDL+ D V      I       KKDC DL RR+ LL HL EEI +             D
Sbjct: 11  LLDLIADIV-----EIPLNTGMFKKDCADLTRRVCLLTHLLEEIRD---------STPID 70

Query: 78  DGSSSSSLSSWLDCLSEVVGAIQAAKRLLYTALTFSPNDEEGCVTSTVSSSCLSVIAYNC 137
             +SSSS + W    S++V  +QAAKRLL TA  F   D         S      I++  
Sbjct: 71  SAASSSSENDW---WSDLVVGLQAAKRLLSTA-RFQARDS--------SDGAAKRISFQF 125

Query: 138 LCLDWKINRPRSVTSIDVISL 159
            C+ WK+ +  S    D+  +
Sbjct: 131 QCVTWKLEKALSNLPYDLYDI 125

[Close]

BLAST of Csa5G571540 vs. NCBI nr
Match: gi|778704042|ref|XP_011655465.1| (PREDICTED: U-box domain-containing protein 10 [Cucumis sativus])

HSP 1 Score: 319.7 bits (818), Expect = 2.9e-84
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 1


Query: 1   MSSEVMGDGRRRALALQLLDLVRDFVLMSGRSIAGAGDTMKKDCTDLIRRIALLVHLAEE 60
           MSSEVMGDGRRRALALQLLDLVRDFVLMSGRSIAGAGDTMKKDCTDLIRRIALLVHLAEE
Sbjct: 1   MSSEVMGDGRRRALALQLLDLVRDFVLMSGRSIAGAGDTMKKDCTDLIRRIALLVHLAEE 60

Query: 61  ITNFCSGSWDNFEKSNDDGSSSSSLSSWLDCLSEVVGAIQAAKRLLYTALTFSPNDEEGC 120
           ITNFCSGSWDNFEKSNDDGSSSSSLSSWLDCLSEVVGAIQAAKRLLYTALTFSPNDEEGC
Sbjct: 61  ITNFCSGSWDNFEKSNDDGSSSSSLSSWLDCLSEVVGAIQAAKRLLYTALTFSPNDEEGC 120

Query: 121 VTSTVSSSCLSVIAYNCLCLDWKINRPRSVTSIDVISLHF 161
           VTSTVSSSCLSVIAYNCLCLDWKINRPRSVTSIDVISLHF
Sbjct: 121 VTSTVSSSCLSVIAYNCLCLDWKINRPRSVTSIDVISLHF 160

[Close]

BLAST of Csa5G571540 vs. NCBI nr
Match: gi|659072888|ref|XP_008467149.1| (PREDICTED: U-box domain-containing protein 11-like isoform X1 [Cucumis melo])

HSP 1 Score: 220.3 bits (560), Expect = 2.4e-54
Identity = 114/124 (91.94%), Postives = 116/124 (93.55%), Query Frame = 1


Query: 1   MSSEVMGDGRRRALALQLLDLVRDFVLMSGRSIAGAGDTMKKDCTDLIRRIALLVHLAEE 60
           MSSEVMGDGRRRALALQLLDLVRDFVLMSGRSIAG GD MKKDCTDLIRRIALL+HLAEE
Sbjct: 1   MSSEVMGDGRRRALALQLLDLVRDFVLMSGRSIAGTGDAMKKDCTDLIRRIALLIHLAEE 60

Query: 61  ITNFCSGSWDNFEKSNDDGSSSSSLSSWLDCLSEVVGAIQAAKRLLYTALTFSPNDEEGC 120
           ITNFCSGS DNFEKSNDDG SS+SLSSWLDCLSEVVGAIQAAKRLLYTALTFS  DEEGC
Sbjct: 61  ITNFCSGSGDNFEKSNDDG-SSTSLSSWLDCLSEVVGAIQAAKRLLYTALTFSAYDEEGC 120

Query: 121 VTST 125
             ST
Sbjct: 121 APST 123

[Close]

BLAST of Csa5G571540 vs. NCBI nr
Match: gi|659072890|ref|XP_008467150.1| (PREDICTED: U-box domain-containing protein 11-like isoform X2 [Cucumis melo])

HSP 1 Score: 211.8 bits (538), Expect = 8.6e-52
Identity = 109/119 (91.60%), Postives = 111/119 (93.28%), Query Frame = 1


Query: 6   MGDGRRRALALQLLDLVRDFVLMSGRSIAGAGDTMKKDCTDLIRRIALLVHLAEEITNFC 65
           MGDGRRRALALQLLDLVRDFVLMSGRSIAG GD MKKDCTDLIRRIALL+HLAEEITNFC
Sbjct: 1   MGDGRRRALALQLLDLVRDFVLMSGRSIAGTGDAMKKDCTDLIRRIALLIHLAEEITNFC 60

Query: 66  SGSWDNFEKSNDDGSSSSSLSSWLDCLSEVVGAIQAAKRLLYTALTFSPNDEEGCVTST 125
           SGS DNFEKSNDDG SS+SLSSWLDCLSEVVGAIQAAKRLLYTALTFS  DEEGC  ST
Sbjct: 61  SGSGDNFEKSNDDG-SSTSLSSWLDCLSEVVGAIQAAKRLLYTALTFSAYDEEGCAPST 118

[Close]

BLAST of Csa5G571540 vs. NCBI nr
Match: gi|225424193|ref|XP_002280520.1| (PREDICTED: U-box domain-containing protein 11 [Vitis vinifera])

HSP 1 Score: 77.0 bits (188), Expect = 3.3e-11
Identity = 54/130 (41.54%), Postives = 69/130 (53.08%), Query Frame = 1


Query: 17  QLLDLVRDFVLMSGRSIAGAGDTMKKDCTDLIRRIALLVHLAEEITNFCSGSWDNFEKSN 76
           +LL LV D V +S     G G   K+DCTDL+RRIALL HL EEI +F +G      +  
Sbjct: 6   ELLALVNDVVGVS----VGFGGVFKRDCTDLVRRIALLTHLFEEIRDFGAGL-----RPL 65

Query: 77  DDGSSSSSLSSWLDCLSEVVGAIQAAKRLLYTALTFSPNDEEGCVTSTVSSSCLSVIAYN 136
           D  +SS+S    L CLSEV  A+QAAKRLL  A  FS        +   S      I + 
Sbjct: 66  DVSTSSASP---LTCLSEVANALQAAKRLLSAAGNFS--------SDAFSDGAAKKITFQ 115

Query: 137 CLCLDWKINR 147
             C+ WK+ +
Sbjct: 126 FQCVTWKLEK 115

[Close]

BLAST of Csa5G571540 vs. NCBI nr
Match: gi|297737715|emb|CBI26916.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 77.0 bits (188), Expect = 3.3e-11
Identity = 54/130 (41.54%), Postives = 69/130 (53.08%), Query Frame = 1


Query: 17  QLLDLVRDFVLMSGRSIAGAGDTMKKDCTDLIRRIALLVHLAEEITNFCSGSWDNFEKSN 76
           +LL LV D V +S     G G   K+DCTDL+RRIALL HL EEI +F +G      +  
Sbjct: 6   ELLALVNDVVGVS----VGFGGVFKRDCTDLVRRIALLTHLFEEIRDFGAGL-----RPL 65

Query: 77  DDGSSSSSLSSWLDCLSEVVGAIQAAKRLLYTALTFSPNDEEGCVTSTVSSSCLSVIAYN 136
           D  +SS+S    L CLSEV  A+QAAKRLL  A  FS        +   S      I + 
Sbjct: 66  DVSTSSASP---LTCLSEVANALQAAKRLLSAAGNFS--------SDAFSDGAAKKITFQ 115

Query: 137 CLCLDWKINR 147
             C+ WK+ +
Sbjct: 126 FQCVTWKLEK 115

The following BLAST results are available for this feature:

BLAST of Csa5G571540 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PUB10_ARATH	4.5e-08	35.96	U-box domain-containing protein 10 OS=Arabidopsis thaliana GN=PUB10 PE=2 SV=1	[more]
PUB11_ARATH	5.8e-08	34.04	U-box domain-containing protein 11 OS=Arabidopsis thaliana GN=PUB11 PE=2 SV=2	[more]

BLAST of Csa5G571540 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KUY9_CUCSA	2.0e-84	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G571540 PE=4 SV=1	[more]
F6HFJ0_VITVI	2.3e-11	41.54	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g04770 PE=4 SV=...	[more]
A0A067L0L5_JATCU	1.5e-10	39.26	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04683 PE=4 SV=1	[more]
A0A0D2MCL0_GOSRA	4.3e-10	39.46	Uncharacterized protein OS=Gossypium raimondii GN=B456_002G180200 PE=4 SV=1	[more]
M5XAP4_PRUPE	4.3e-10	37.98	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002756mg PE=4 SV=1	[more]

BLAST of Csa5G571540 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G71020.1	2.5e-09	35.96	ARM repeat superfamily protein	[more]
AT1G23030.1	3.3e-09	34.04	ARM repeat superfamily protein	[more]

BLAST of Csa5G571540 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778704042\|ref\|XP_011655465.1\|	2.9e-84	100.00	PREDICTED: U-box domain-containing protein 10 [Cucumis sativus]	[more]
gi\|659072888\|ref\|XP_008467149.1\|	2.4e-54	91.94	PREDICTED: U-box domain-containing protein 11-like isoform X1 [Cucumis melo]	[more]
gi\|659072890\|ref\|XP_008467150.1\|	8.6e-52	91.60	PREDICTED: U-box domain-containing protein 11-like isoform X2 [Cucumis melo]	[more]
gi\|225424193\|ref\|XP_002280520.1\|	3.3e-11	41.54	PREDICTED: U-box domain-containing protein 11 [Vitis vinifera]	[more]
gi\|297737715\|emb\|CBI26916.3\|	3.3e-11	41.54	unnamed protein product [Vitis vinifera]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005515	protein binding
molecular_function	GO:0004842	ubiquitin-protein transferase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa5G571540.1	Csa5G571540.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa5G571540	MELO3C005318	Melon (DHL92) v3.5.1	cumeB346
Csa5G571540	Lsi09G006460	Bottle gourd (USVL1VR-Ls)	culsiB329
Csa5G571540	MELO3C005318.2	Melon (DHL92) v3.6.1	cumedB329
Csa5G571540	Cla97C01G006390	Watermelon (97103) v2	cuwmbB344
Csa5G571540	Bhi12G000764	Wax gourd	cuwgoB450
Csa5G571540	CSPI05G19740	Wild cucumber (PI 183967)	cpicuB239
Csa5G571540	Cucsa.280510	Cucumber (Gy14) v1	cgycuB398
Csa5G571540	CmoCh15G009840	Cucurbita moschata (Rifu)	cmocuB289

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa5G571540	Cucurbita pepo (Zucchini)	cpecuB016
Csa5G571540	Cucurbita pepo (Zucchini)	cpecuB049
Csa5G571540	Cucurbita pepo (Zucchini)	cpecuB177
Csa5G571540	Bottle gourd (USVL1VR-Ls)	culsiB365
Csa5G571540	Cucumber (Gy14) v2	cgybcuB223
Csa5G571540	Cucumber (Gy14) v2	cgybcuB234
Csa5G571540	Melon (DHL92) v3.6.1	cumedB353
Csa5G571540	Silver-seed gourd	carcuB0211
Csa5G571540	Silver-seed gourd	carcuB0461
Csa5G571540	Silver-seed gourd	carcuB0863
Csa5G571540	Silver-seed gourd	carcuB1065
Csa5G571540	Watermelon (97103) v2	cuwmbB380
Csa5G571540	Wax gourd	cuwgoB508
Csa5G571540	Cucumber (Chinese Long) v2	cucuB160
Csa5G571540	Cucumber (Gy14) v1	cgycuB409
Csa5G571540	Cucurbita maxima (Rimu)	cmacuB301
Csa5G571540	Cucurbita maxima (Rimu)	cmacuB415
Csa5G571540	Cucurbita maxima (Rimu)	cmacuB737
Csa5G571540	Cucurbita maxima (Rimu)	cmacuB752
Csa5G571540	Cucurbita moschata (Rifu)	cmocuB404
Csa5G571540	Cucurbita moschata (Rifu)	cmocuB729
Csa5G571540	Cucurbita moschata (Rifu)	cmocuB742
Csa5G571540	Melon (DHL92) v3.5.1	cumeB372
Csa5G571540	Watermelon (Charleston Gray)	cuwcgB372
Csa5G571540	Watermelon (Charleston Gray)	cuwcgB391
Csa5G571540	Watermelon (97103) v1	cuwmB398
Csa5G571540	Watermelon (97103) v1	cuwmB416