Csa5G432540 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTATTTGGTGACAGTTGAAGATGAGATTTTAACAACTACTTTAGAGGTCAATGTTTTTTTCACATTACTTGTTTATGATAGTCTGGAAGACGAGTATTTGGCAGTCCATGGTAATTAAACCTAGACCCTAAAACCATGTTTTAATGTAATTATTATTTTAACCAAAAACATGTGAGAAGGTGTACTAAGTATTTGAACTAGATTGATACATTCTCAACATCCTAAATTTAAAAAAAAACTGAAAAGCATGTTTTATGTCAATATTTTTTTCATGAAAAAAATCAATCTCTTCCGTTTAACTTTGCATTCTTCTACTTATTTATATGTTGTGTCCAAATTAATATGATTCAGATGGGAAAACAAAATGCTTTCATGCAATGAAAACAGAATGGGGATTTGAAAACTTGGTTTCACTTGACACTTTCAACGTTCCTTCAAATGGATTTTTGGTTGATGATTATTGTGCTTTTGGAGTCGACGTTTTTATTATGAAATTTGATGGGAAGGGAGAGATCCTTTCCTCTATCAACCAACCAGAAAATTACAAATTTACTTGGAAATTCAAGGATTTCTCACAACTACGTCAAAATCGTTACGAGTCCAATGCTTTTACAGTGGAGAACTACCGTTGGTAATGAAAATTTATTTTGAATTATTTGTATATGAAGTTATATTAATATATATATGTAGATATTACACTTAATGATTTTATGTTTCAGGAAGATATCCTTGTATCCTAACGGATACTCACAAGCAAGCTCTGAATATCTATCATTGTTTTTGGCATTGGATAGCGTCGAAGAACTTCCCTCAAGATTCTCGAGTGTACATTGA ATGTATTTGGTGACAGTTGAAGATGAGATTTTAACAACTACTTTAGAGGTCAATGTTTTTTTCACATTACTTGTTTATGATAGTCTGGAAGACGAGTATTTGGCAGTCCATGATGGGAAAACAAAATGCTTTCATGCAATGAAAACAGAATGGGGATTTGAAAACTTGGTTTCACTTGACACTTTCAACGTTCCTTCAAATGGATTTTTGGTTGATGATTATTGTGCTTTTGGAGTCGACGTTTTTATTATGAAATTTGATGGGAAGGGAGAGATCCTTTCCTCTATCAACCAACCAGAAAATTACAAATTTACTTGGAAATTCAAGGATTTCTCACAACTACGTCAAAATCGTTACGAGTCCAATGCTTTTACAGTGGAGAACTACCGTTGGAAGATATCCTTGTATCCTAACGGATACTCACAAGCAAGCTCTGAATATCTATCATTGTTTTTGGCATTGGATAGCGTCGAAGAACTTCCCTCAAGATTCTCGAGTGTACATTGA ATGTATTTGGTGACAGTTGAAGATGAGATTTTAACAACTACTTTAGAGGTCAATGTTTTTTTCACATTACTTGTTTATGATAGTCTGGAAGACGAGTATTTGGCAGTCCATGATGGGAAAACAAAATGCTTTCATGCAATGAAAACAGAATGGGGATTTGAAAACTTGGTTTCACTTGACACTTTCAACGTTCCTTCAAATGGATTTTTGGTTGATGATTATTGTGCTTTTGGAGTCGACGTTTTTATTATGAAATTTGATGGGAAGGGAGAGATCCTTTCCTCTATCAACCAACCAGAAAATTACAAATTTACTTGGAAATTCAAGGATTTCTCACAACTACGTCAAAATCGTTACGAGTCCAATGCTTTTACAGTGGAGAACTACCGTTGGAAGATATCCTTGTATCCTAACGGATACTCACAAGCAAGCTCTGAATATCTATCATTGTTTTTGGCATTGGATAGCGTCGAAGAACTTCCCTCAAGATTCTCGAGTGTACATTGA MYLVTVEDEILTTTLEVNVFFTLLVYDSLEDEYLAVHDGKTKCFHAMKTEWGFENLVSLDTFNVPSNGFLVDDYCAFGVDVFIMKFDGKGEILSSINQPENYKFTWKFKDFSQLRQNRYESNAFTVENYRWKISLYPNGYSQASSEYLSLFLALDSVEELPSRFSSVH*
BLAST of Csa5G432540 vs. TrEMBL
Match: A0A0A0KRR8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G432540 PE=4 SV=1) HSP 1 Score: 346.3 bits (887), Expect = 2.1e-92 Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 1
BLAST of Csa5G432540 vs. TrEMBL
Match: A0A0A0KND8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G432550 PE=4 SV=1) HSP 1 Score: 183.0 bits (463), Expect = 3.1e-43 Identity = 90/162 (55.56%), Postives = 112/162 (69.14%), Query Frame = 1
BLAST of Csa5G432540 vs. TrEMBL
Match: A0A0A0KND8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G432550 PE=4 SV=1) HSP 1 Score: 41.2 bits (95), Expect = 1.5e+00 Identity = 24/86 (27.91%), Postives = 45/86 (52.33%), Query Frame = 1
HSP 2 Score: 149.1 bits (375), Expect = 5.0e-33 Identity = 70/161 (43.48%), Postives = 98/161 (60.87%), Query Frame = 1
BLAST of Csa5G432540 vs. TrEMBL
Match: I1JQJ7_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_03G212000 PE=4 SV=1) HSP 1 Score: 39.3 bits (90), Expect = 5.6e+00 Identity = 20/63 (31.75%), Postives = 34/63 (53.97%), Query Frame = 1
HSP 2 Score: 146.7 bits (369), Expect = 2.5e-32 Identity = 75/165 (45.45%), Postives = 106/165 (64.24%), Query Frame = 1
BLAST of Csa5G432540 vs. TrEMBL
Match: A0A061DUC7_THECC (TRAF-like family protein, putative OS=Theobroma cacao GN=TCM_005650 PE=4 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 4.9e-04 Identity = 27/67 (40.30%), Postives = 44/67 (65.67%), Query Frame = 1
HSP 2 Score: 145.6 bits (366), Expect = 5.5e-32 Identity = 72/165 (43.64%), Postives = 105/165 (63.64%), Query Frame = 1
BLAST of Csa5G432540 vs. TAIR10
Match: AT3G17380.1 (AT3G17380.1 TRAF-like family protein) HSP 1 Score: 122.1 bits (305), Expect = 3.3e-28 Identity = 62/162 (38.27%), Postives = 91/162 (56.17%), Query Frame = 1
HSP 2 Score: 45.4 bits (106), Expect = 3.9e-05 Identity = 24/68 (35.29%), Postives = 40/68 (58.82%), Query Frame = 1
BLAST of Csa5G432540 vs. TAIR10
Match: AT2G15710.1 (AT2G15710.1 TRAF-like family protein) HSP 1 Score: 105.5 bits (262), Expect = 3.2e-23 Identity = 52/150 (34.67%), Postives = 83/150 (55.33%), Query Frame = 1
BLAST of Csa5G432540 vs. TAIR10
Match: AT1G69660.1 (AT1G69660.1 TRAF-like family protein) HSP 1 Score: 102.8 bits (255), Expect = 2.1e-22 Identity = 53/139 (38.13%), Postives = 78/139 (56.12%), Query Frame = 1
BLAST of Csa5G432540 vs. TAIR10
Match: AT3G22080.1 (AT3G22080.1 TRAF-like family protein) HSP 1 Score: 101.3 bits (251), Expect = 6.0e-22 Identity = 56/162 (34.57%), Postives = 83/162 (51.23%), Query Frame = 1
HSP 2 Score: 58.5 bits (140), Expect = 4.5e-09 Identity = 31/94 (32.98%), Postives = 48/94 (51.06%), Query Frame = 1
BLAST of Csa5G432540 vs. TAIR10
Match: AT5G26260.1 (AT5G26260.1 TRAF-like family protein) HSP 1 Score: 97.4 bits (241), Expect = 8.7e-21 Identity = 55/152 (36.18%), Postives = 76/152 (50.00%), Query Frame = 1
BLAST of Csa5G432540 vs. NCBI nr
Match: gi|700195910|gb|KGN51087.1| (hypothetical protein Csa_5G432540 [Cucumis sativus]) HSP 1 Score: 346.3 bits (887), Expect = 3.1e-92 Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 1
BLAST of Csa5G432540 vs. NCBI nr
Match: gi|778708515|ref|XP_011656220.1| (PREDICTED: uncharacterized protein LOC105435676 [Cucumis sativus]) HSP 1 Score: 278.9 bits (712), Expect = 6.0e-72 Identity = 138/161 (85.71%), Postives = 143/161 (88.82%), Query Frame = 1
BLAST of Csa5G432540 vs. NCBI nr
Match: gi|700195911|gb|KGN51088.1| (hypothetical protein Csa_5G432550 [Cucumis sativus]) HSP 1 Score: 183.0 bits (463), Expect = 4.5e-43 Identity = 90/162 (55.56%), Postives = 112/162 (69.14%), Query Frame = 1
BLAST of Csa5G432540 vs. NCBI nr
Match: gi|700195911|gb|KGN51088.1| (hypothetical protein Csa_5G432550 [Cucumis sativus]) HSP 1 Score: 41.2 bits (95), Expect = 2.1e+00 Identity = 24/86 (27.91%), Postives = 45/86 (52.33%), Query Frame = 1
HSP 2 Score: 183.0 bits (463), Expect = 4.5e-43 Identity = 90/162 (55.56%), Postives = 112/162 (69.14%), Query Frame = 1
BLAST of Csa5G432540 vs. NCBI nr
Match: gi|778708517|ref|XP_011656221.1| (PREDICTED: uncharacterized protein LOC105435677 [Cucumis sativus]) HSP 1 Score: 41.2 bits (95), Expect = 2.1e+00 Identity = 24/86 (27.91%), Postives = 45/86 (52.33%), Query Frame = 1
HSP 2 Score: 178.3 bits (451), Expect = 1.1e-41 Identity = 94/165 (56.97%), Postives = 116/165 (70.30%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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