Csa5G432540 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa5G432540
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Ubiquitin carboxyl-terminal hydrolase; contains IPR008974 (TRAF-like)
Location	Chr5 : 15723817 .. 15724652 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATTTGGTGACAGTTGAAGATGAGATTTTAACAACTACTTTAGAGGTCAATGTTTTTTTCACATTACTTGTTTATGATAGTCTGGAAGACGAGTATTTGGCAGTCCATGGTAATTAAACCTAGACCCTAAAACCATGTTTTAATGTAATTATTATTTTAACCAAAAACATGTGAGAAGGTGTACTAAGTATTTGAACTAGATTGATACATTCTCAACATCCTAAATTTAAAAAAAAACTGAAAAGCATGTTTTATGTCAATATTTTTTTCATGAAAAAAATCAATCTCTTCCGTTTAACTTTGCATTCTTCTACTTATTTATATGTTGTGTCCAAATTAATATGATTCAGATGGGAAAACAAAATGCTTTCATGCAATGAAAACAGAATGGGGATTTGAAAACTTGGTTTCACTTGACACTTTCAACGTTCCTTCAAATGGATTTTTGGTTGATGATTATTGTGCTTTTGGAGTCGACGTTTTTATTATGAAATTTGATGGGAAGGGAGAGATCCTTTCCTCTATCAACCAACCAGAAAATTACAAATTTACTTGGAAATTCAAGGATTTCTCACAACTACGTCAAAATCGTTACGAGTCCAATGCTTTTACAGTGGAGAACTACCGTTGGTAATGAAAATTTATTTTGAATTATTTGTATATGAAGTTATATTAATATATATATGTAGATATTACACTTAATGATTTTATGTTTCAGGAAGATATCCTTGTATCCTAACGGATACTCACAAGCAAGCTCTGAATATCTATCATTGTTTTTGGCATTGGATAGCGTCGAAGAACTTCCCTCAAGATTCTCGAGTGTACATTGA

mRNA sequence

ATGTATTTGGTGACAGTTGAAGATGAGATTTTAACAACTACTTTAGAGGTCAATGTTTTTTTCACATTACTTGTTTATGATAGTCTGGAAGACGAGTATTTGGCAGTCCATGATGGGAAAACAAAATGCTTTCATGCAATGAAAACAGAATGGGGATTTGAAAACTTGGTTTCACTTGACACTTTCAACGTTCCTTCAAATGGATTTTTGGTTGATGATTATTGTGCTTTTGGAGTCGACGTTTTTATTATGAAATTTGATGGGAAGGGAGAGATCCTTTCCTCTATCAACCAACCAGAAAATTACAAATTTACTTGGAAATTCAAGGATTTCTCACAACTACGTCAAAATCGTTACGAGTCCAATGCTTTTACAGTGGAGAACTACCGTTGGAAGATATCCTTGTATCCTAACGGATACTCACAAGCAAGCTCTGAATATCTATCATTGTTTTTGGCATTGGATAGCGTCGAAGAACTTCCCTCAAGATTCTCGAGTGTACATTGA

Coding sequence (CDS)

ATGTATTTGGTGACAGTTGAAGATGAGATTTTAACAACTACTTTAGAGGTCAATGTTTTTTTCACATTACTTGTTTATGATAGTCTGGAAGACGAGTATTTGGCAGTCCATGATGGGAAAACAAAATGCTTTCATGCAATGAAAACAGAATGGGGATTTGAAAACTTGGTTTCACTTGACACTTTCAACGTTCCTTCAAATGGATTTTTGGTTGATGATTATTGTGCTTTTGGAGTCGACGTTTTTATTATGAAATTTGATGGGAAGGGAGAGATCCTTTCCTCTATCAACCAACCAGAAAATTACAAATTTACTTGGAAATTCAAGGATTTCTCACAACTACGTCAAAATCGTTACGAGTCCAATGCTTTTACAGTGGAGAACTACCGTTGGAAGATATCCTTGTATCCTAACGGATACTCACAAGCAAGCTCTGAATATCTATCATTGTTTTTGGCATTGGATAGCGTCGAAGAACTTCCCTCAAGATTCTCGAGTGTACATTGA

Protein sequence

MYLVTVEDEILTTTLEVNVFFTLLVYDSLEDEYLAVHDGKTKCFHAMKTEWGFENLVSLDTFNVPSNGFLVDDYCAFGVDVFIMKFDGKGEILSSINQPENYKFTWKFKDFSQLRQNRYESNAFTVENYRWKISLYPNGYSQASSEYLSLFLALDSVEELPSRFSSVH*

Homology

[Close]

BLAST of Csa5G432540 vs. TrEMBL
Match: A0A0A0KRR8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G432540 PE=4 SV=1)

HSP 1 Score: 346.3 bits (887), Expect = 2.1e-92
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 1


Query: 1   MYLVTVEDEILTTTLEVNVFFTLLVYDSLEDEYLAVHDGKTKCFHAMKTEWGFENLVSLD 60
           MYLVTVEDEILTTTLEVNVFFTLLVYDSLEDEYLAVHDGKTKCFHAMKTEWGFENLVSLD
Sbjct: 1   MYLVTVEDEILTTTLEVNVFFTLLVYDSLEDEYLAVHDGKTKCFHAMKTEWGFENLVSLD 60

Query: 61  TFNVPSNGFLVDDYCAFGVDVFIMKFDGKGEILSSINQPENYKFTWKFKDFSQLRQNRYE 120
           TFNVPSNGFLVDDYCAFGVDVFIMKFDGKGEILSSINQPENYKFTWKFKDFSQLRQNRYE
Sbjct: 61  TFNVPSNGFLVDDYCAFGVDVFIMKFDGKGEILSSINQPENYKFTWKFKDFSQLRQNRYE 120

Query: 121 SNAFTVENYRWKISLYPNGYSQASSEYLSLFLALDSVEELPSRFSSVH 169
           SNAFTVENYRWKISLYPNGYSQASSEYLSLFLALDSVEELPSRFSSVH
Sbjct: 121 SNAFTVENYRWKISLYPNGYSQASSEYLSLFLALDSVEELPSRFSSVH 168

[Close]

BLAST of Csa5G432540 vs. TrEMBL
Match: A0A0A0KND8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G432550 PE=4 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 3.1e-43
Identity = 90/162 (55.56%), Postives = 112/162 (69.14%), Query Frame = 1


Query: 1   MYLVTVEDEILTTTLEVNVFFTLLVYDSLEDEYLAVHDGKTKCFHAMKTEWGFENLVSLD 60
           +YLV V D IL+TT EVN  FT LVYD+L  +YL V DGK + F A KTEWG E L+ L+
Sbjct: 94  LYLVMVGDNILSTTSEVNAVFTFLVYDTLRGKYLTVQDGKMRRFSATKTEWGIEKLLPLN 153

Query: 61  TFNVPSNGFLVDDYCAFGVDVFIMKFD-GKGEILSSINQPENYKFTWKFKDFSQLRQNRY 120
           TF   SNGFLVDD C FGVD+F+M  D GKGE+ S I QP NYK+TWK  +FS+L  +  
Sbjct: 154 TFKDASNGFLVDDCCVFGVDIFVMNSDVGKGEVFSLIEQPNNYKYTWKLNNFSKLDSSLR 213

Query: 121 ESNAFTVENYRWKISLYPNGYSQASSEYLSLFLALDSVEELP 162
           E N FTVEN  WKI L+P+G  QA   + S++L L +++E P
Sbjct: 214 ECNPFTVENCCWKIRLFPSGDLQAKPGFFSMYLMLTNLKEFP 255

[Close]

BLAST of Csa5G432540 vs. TrEMBL
Match: A0A0A0KND8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G432550 PE=4 SV=1)

HSP 1 Score: 41.2 bits (95), Expect = 1.5e+00
Identity = 24/86 (27.91%), Postives = 45/86 (52.33%), Query Frame = 1


Query: 92  ILSSINQPENYKFTWKFKDFSQLRQN-------RYESNAFTVENYRWKISLYPNGYSQAS 151
           +++S    +   +  K + FS L++        R+ES  F    Y WK++LYPNG  +  
Sbjct: 28  VVTSSRYEKPVHYILKIQSFSLLKEGLACSPRQRFESQKFNAGGYEWKLALYPNGDQRRD 87

Query: 152 -SEYLSLFLAL--DSVEELPSRFSSV 168
            S+++SL+L +  D++    S  ++V
Sbjct: 88  VSDHISLYLVMVGDNILSTTSEVNAV 113

HSP 2 Score: 149.1 bits (375), Expect = 5.0e-33
Identity = 70/161 (43.48%), Postives = 98/161 (60.87%), Query Frame = 1


Query: 1   MYLVTVEDEILTTTLEVNVFFTLLVYDSLEDEYLAVHDGKTKCFHAMKTEWGFENLVSLD 60
           +YLV ++   L    EVN       Y+ ++DEY+A  D   + FH +KTEWG    + +D
Sbjct: 75  IYLVLMDSSSLPVDWEVNAIVNFSAYNFIDDEYVATQDTNVRRFHVLKTEWGVAKFIDID 134

Query: 61  TFNVPSNGFLVDDYCAFGVDVFIMKFDGKGEILSSINQPENYKFTWKFKDFSQLRQNRYE 120
           TFN PSNG+L+DD C FG +VF++K   KG+ LS I+ P     +WKF +FS  + ++YE
Sbjct: 135 TFNDPSNGYLMDDTCVFGAEVFVVKTTTKGDCLSMIHGPIPLSHSWKFDNFSLAKLDKYE 194

Query: 121 SNAFTVENYRWKISLYPNGYSQASSEYLSLFLALDSVEELP 162
           S +F   NYRWK+ LYPNG  +     +SLFL L+ V  LP
Sbjct: 195 SESFVGGNYRWKLILYPNGIVEGKGNSISLFLTLE-VSTLP 234

[Close]

BLAST of Csa5G432540 vs. TrEMBL
Match: I1JQJ7_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_03G212000 PE=4 SV=1)

HSP 1 Score: 39.3 bits (90), Expect = 5.6e+00
Identity = 20/63 (31.75%), Postives = 34/63 (53.97%), Query Frame = 1


Query: 103 KFTWKFKDFSQLRQ---NRYESNAFTVENYRWKISLYPNGYSQASSE-YLSLFLALDSVE 162
           ++T+K K FS L +    +  S  F    Y+W +S+YP G ++   E ++S++L L    
Sbjct: 24  QYTFKIKSFSWLSKAPVQKCTSEEFEAGGYKWSLSIYPTGNTKGGGEGHVSIYLVLMDSS 83

HSP 2 Score: 146.7 bits (369), Expect = 2.5e-32
Identity = 75/165 (45.45%), Postives = 106/165 (64.24%), Query Frame = 1


Query: 1   MYLVTVEDEILTTTLEVNVFFTLLVYDSLEDEYLAVHD--GKTKCFHAMKTEWGFENLVS 60
           +YLV  E E L  T EVNV F L + D + D+YL + D  G  K FH MKTEWGF  L+S
Sbjct: 72  LYLVIDETENLPHTWEVNVSFRLFMLDQIRDKYLTIEDADGAVKRFHWMKTEWGFAQLLS 131

Query: 61  LDTFNVPSNGFLVDDYCAFGVDVFIMKFDGKGEILSSINQPENYKFTWKFKDFSQLRQNR 120
           L++FN  SNG+L+ D C FG +VF+M+ + K E LS I +PE+   T+K  +FS+L +  
Sbjct: 132 LESFNNTSNGYLIGDCCIFGAEVFLMERNCKWECLSMIKEPEDNTITFKMDNFSKLDKKY 191

Query: 121 YESNAFTVENYRWKISLYPNGYSQASSEYLSLFLALDSVEELPSR 164
           YES+  T+ + +WK+++YP G  +   + LSLFL L   E+LP +
Sbjct: 192 YESSVHTIGDSKWKLTVYPKGNVKFKGKALSLFLELVEAEKLPPK 236

[Close]

BLAST of Csa5G432540 vs. TrEMBL
Match: A0A061DUC7_THECC (TRAF-like family protein, putative OS=Theobroma cacao GN=TCM_005650 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 4.9e-04
Identity = 27/67 (40.30%), Postives = 44/67 (65.67%), Query Frame = 1


Query: 99  PENYKFTWKFKDFSQLRQ---NRYESNAFTVENYRWKISLYPNGYSQAS-SEYLSLFLAL 158
           P +Y F  K + FS L +   ++YES+ F    Y+W++SLYPNG ++++ S ++SL+L +
Sbjct: 19  PAHYLF--KVESFSLLAKTGVDKYESDVFEAAGYKWRLSLYPNGDNKSNGSGFISLYLVI 78

Query: 159 DSVEELP 162
           D  E LP
Sbjct: 79  DETENLP 83

HSP 2 Score: 145.6 bits (366), Expect = 5.5e-32
Identity = 72/165 (43.64%), Postives = 105/165 (63.64%), Query Frame = 1


Query: 1   MYLVTVEDEILTTTLEVNVFFTLLVYDSLEDEYLAVHD--GKTKCFHAMKTEWGFENLVS 60
           +YL   + ++L    EVNV F L V++   D+YL V D  GK   F+ MKT+ GF   +S
Sbjct: 78  LYLAIADTKMLPLGWEVNVNFKLFVFNHKHDQYLTVQDAGGKLTRFNVMKTQCGFPQFLS 137

Query: 61  LDTFNVPSNGFLVDDYCAFGVDVFIMKFDGKGEILSSINQPENYKFTWKFKDFSQLRQNR 120
           LD  N P NG+L++D C FG +VF++K+ GKGE LS I +P +  FTW  ++FS L++  
Sbjct: 138 LDVLNDPCNGYLMEDSCIFGAEVFVIKYSGKGECLSMIKEPVDGTFTWVIENFSTLKEKV 197

Query: 121 YESNAFTVENYRWKISLYPNGYSQASSEYLSLFLALDSVEELPSR 164
             S+ FTVE+++WK+ LYP G S+  ++ LSLFL L   E L ++
Sbjct: 198 MYSDVFTVEDFKWKLILYPKGSSKTKNKSLSLFLELADCETLDNQ 242

[Close]

BLAST of Csa5G432540 vs. TAIR10
Match: AT3G17380.1 (AT3G17380.1 TRAF-like family protein)

HSP 1 Score: 122.1 bits (305), Expect = 3.3e-28
Identity = 62/162 (38.27%), Postives = 91/162 (56.17%), Query Frame = 1


Query: 1   MYLVTVEDEILTTTLEVNVFFTLLVYDSLEDEYLAVHDGKTKCFHAMKTEWGFENLVSLD 60
           +YL   +   L+   EV   F L + D  +D YL +  G  + FH++K EWGF+  +   
Sbjct: 72  VYLSLADSSSLSPGWEVYAVFRLYLLDQNKDNYLILQ-GNERRFHSVKREWGFDKFIPTG 131

Query: 61  TFNVPSNGFLVDDYCAFGVDVFIMKF--DGKGEILSSINQPENYKFTWKFKDFSQLRQNR 120
           TF+  SNG+L++D C FG DVF+ K    G+GE LS I    + K  WK ++FS+L +  
Sbjct: 132 TFSDASNGYLMEDTCMFGADVFVSKERRSGRGECLSMIKDATSSKHVWKIENFSKLDKES 191

Query: 121 YESNAFTVENYRWKISLYPNGYSQASSEYLSLFLALDSVEEL 161
           Y+SNAF   + +WKI  YP G  Q +  +LS++L L   E +
Sbjct: 192 YDSNAFFAGDRKWKIEFYPTGTKQGTGTHLSIYLTLVDPETI 232

HSP 2 Score: 45.4 bits (106), Expect = 3.9e-05
Identity = 24/68 (35.29%), Postives = 40/68 (58.82%), Query Frame = 1


Query: 91  EILSSINQPENYKFTWKFKDFSQLRQN---RYESNAFTVENYRWKISLYPNG-YSQASSE 150
           EI+ SI+      +  K + FS L ++   RYE+ +F    Y+WK+ LYPNG  S+ + +
Sbjct: 9   EIIKSISDAPPTHYMVKIESFSLLTKHAIERYETESFEAGGYKWKLVLYPNGNKSKNTKD 68

Query: 151 YLSLFLAL 155
           ++S++L+L
Sbjct: 69  HVSVYLSL 76

[Close]

BLAST of Csa5G432540 vs. TAIR10
Match: AT2G15710.1 (AT2G15710.1 TRAF-like family protein)

HSP 1 Score: 105.5 bits (262), Expect = 3.2e-23
Identity = 52/150 (34.67%), Postives = 83/150 (55.33%), Query Frame = 1


Query: 12  TTTLEVNVFFTLLVYDSLEDEYLAVHDGKTKCFHAMKTEWGFENLVSLDTFNVPSNGFLV 71
           T+ +EV  +    VY+  E++Y  + D + K F+A++T WG   ++SL+TFN   NG+  
Sbjct: 160 TSPMEVFAYIIFFVYNKKENKYFTIQDVEVKRFNALRTVWGLSQVLSLETFNDLENGYTF 219

Query: 72  D-DYCAFGVDVFIMKFDGKGEILSSINQPENYKFTWKFKDFSQLRQNRYESNAFTVENYR 131
           + + C FGVDV +     K E++S   + +  KF+W  KDFS L++  Y S  F++    
Sbjct: 220 EGEQCEFGVDVMVASPITKWEVVSFDEKLDILKFSWSVKDFSVLKEEFYVSERFSMGGRL 279

Query: 132 WKISLYPNGYSQASSEYLSLFLALDSVEEL 161
           W + +YP G  +   ++LS+FL L   E L
Sbjct: 280 WDLQMYPKGDPRRDKKWLSIFLRLSGSETL 309

[Close]

BLAST of Csa5G432540 vs. TAIR10
Match: AT1G69660.1 (AT1G69660.1 TRAF-like family protein)

HSP 1 Score: 102.8 bits (255), Expect = 2.1e-22
Identity = 53/139 (38.13%), Postives = 78/139 (56.12%), Query Frame = 1


Query: 25  VYDSLEDEYLAVHDGKTKCFHAMKTEWGFENLVSLDTFNVPSNGFLVDD-YCAFGVDVFI 84
           VY+  E++Y  + D + K F+A++  WG   ++S DTF  P NGF+ +   C FGVDV +
Sbjct: 17  VYNKKENKYFTIQDVEVKRFNALRMVWGLLKVLSYDTFTNPENGFIFEGGECEFGVDVLV 76

Query: 85  MKFDGKGEILSSINQPENYKFTWKFKDFSQLRQNRYESNAFTVENYRWKISLYPNGYSQA 144
                  EILS   +    KF+W  K+FS+L+++ Y SN + +    W + LYP G S+A
Sbjct: 77  APPLTNWEILSFDEKLSPPKFSWNLKNFSELKEDVYTSNKYPMGGKEWVLKLYPKGNSRA 136

Query: 145 SSEYLSLFLALDSVEELPS 163
             +YLSL++ L   E L S
Sbjct: 137 DGKYLSLYVHLADSETLKS 155

[Close]

BLAST of Csa5G432540 vs. TAIR10
Match: AT3G22080.1 (AT3G22080.1 TRAF-like family protein)

HSP 1 Score: 101.3 bits (251), Expect = 6.0e-22
Identity = 56/162 (34.57%), Postives = 83/162 (51.23%), Query Frame = 1


Query: 1   MYLVTVEDEILTT-TLEVNVFFTLLVYDSLEDEYLAVHDGKTKCFHAMKTEWGFENLVSL 60
           MY+      +LTT T EV       V++  E++Y  +   ++K F+A +T WG   ++ +
Sbjct: 409 MYVEIDSTSLLTTPTTEVFADLRFFVFNKKENKYYTIQHVESKLFNAFRTIWGLAQVLPV 468

Query: 61  DTFNVPSNGFLVD-DYCAFGVDVFIMKFDGKGEILSSINQPENYKFTWKFKDFSQLRQNR 120
           DTF  P NG++ + D C FGVDV +       EI +        KF W  K+FS+L  N 
Sbjct: 469 DTFTDPKNGYIFEGDQCEFGVDVIVAAPPTNWEIHTLHEALSQPKFFWTVKNFSELNNNV 528

Query: 121 YESNAFTVENYRWKISLYPNGYSQASSEYLSLFLALDSVEEL 161
           Y S  F++   +W + LYP G  +   ++LSL+L LD  E L
Sbjct: 529 YTSGNFSMRERKWVLKLYPKGDVKGDRKWLSLYLYLDQSETL 570

HSP 2 Score: 58.5 bits (140), Expect = 4.5e-09
Identity = 31/94 (32.98%), Postives = 48/94 (51.06%), Query Frame = 1


Query: 67  NGFLVDDYCAFGVDVFIMKFDGKGEILSSINQPENYKFTWKFKDFSQLRQNRYESNAFTV 126
           N F   D C FGVDV +     K E++S   +  + KF+W  K F +L++  Y S+ F V
Sbjct: 153 NAFRTGDQCEFGVDVLVAPSLTKWEVVSFNQKILDPKFSWSLKKFKELKEELYNSDKFLV 212

Query: 127 ENYRWKISLYPNGYSQASSEYLSLFLALDSVEEL 161
              +W + ++P G  +A    LS+++ L   E L
Sbjct: 213 GGRQWFLKVHPKGV-KARDNSLSIYVYLSESETL 245

[Close]

BLAST of Csa5G432540 vs. TAIR10
Match: AT5G26260.1 (AT5G26260.1 TRAF-like family protein)

HSP 1 Score: 97.4 bits (241), Expect = 8.7e-21
Identity = 55/152 (36.18%), Postives = 76/152 (50.00%), Query Frame = 1


Query: 1   MYLVTVEDEILTTTLEVNVFFTLLVYDSLEDEYLAVHDGKTKCFHAMKTEWGFENLVSLD 60
           +Y    E E L    EVNV   L V++    +YL+V DG  K ++  K EWGF  L+SL 
Sbjct: 112 LYARIEETETLPRGWEVNVDLKLFVHNRKLKKYLSVTDGTVKRYNDAKKEWGFTQLISLP 171

Query: 61  TFNVPSNGFLVDDYCAFGVDVFIMKFDGKGEILSSINQPENYKFTWKFKDFSQLRQNRYE 120
           TF   + G+LV D  +FG ++FI+    K E ++ I+ P +  FTWK   FS L    Y 
Sbjct: 172 TFYNANEGYLVQDTASFGAEIFIVNPTEKQEKVTFISNPPDNVFTWKILRFSTLEDKFYY 231

Query: 121 SNAFTVENYRWKISLYPNGYSQASSEYLSLFL 153
           S+ F V +  W++   P G        L +FL
Sbjct: 232 SDDFLVGDRYWRLGFNPKGSGGGRPHALPIFL 263

[Close]

BLAST of Csa5G432540 vs. NCBI nr
Match: gi|700195910|gb|KGN51087.1| (hypothetical protein Csa_5G432540 [Cucumis sativus])

HSP 1 Score: 346.3 bits (887), Expect = 3.1e-92
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 1


Query: 1   MYLVTVEDEILTTTLEVNVFFTLLVYDSLEDEYLAVHDGKTKCFHAMKTEWGFENLVSLD 60
           MYLVTVEDEILTTTLEVNVFFTLLVYDSLEDEYLAVHDGKTKCFHAMKTEWGFENLVSLD
Sbjct: 1   MYLVTVEDEILTTTLEVNVFFTLLVYDSLEDEYLAVHDGKTKCFHAMKTEWGFENLVSLD 60

Query: 61  TFNVPSNGFLVDDYCAFGVDVFIMKFDGKGEILSSINQPENYKFTWKFKDFSQLRQNRYE 120
           TFNVPSNGFLVDDYCAFGVDVFIMKFDGKGEILSSINQPENYKFTWKFKDFSQLRQNRYE
Sbjct: 61  TFNVPSNGFLVDDYCAFGVDVFIMKFDGKGEILSSINQPENYKFTWKFKDFSQLRQNRYE 120

Query: 121 SNAFTVENYRWKISLYPNGYSQASSEYLSLFLALDSVEELPSRFSSVH 169
           SNAFTVENYRWKISLYPNGYSQASSEYLSLFLALDSVEELPSRFSSVH
Sbjct: 121 SNAFTVENYRWKISLYPNGYSQASSEYLSLFLALDSVEELPSRFSSVH 168

[Close]

BLAST of Csa5G432540 vs. NCBI nr
Match: gi|778708515|ref|XP_011656220.1| (PREDICTED: uncharacterized protein LOC105435676 [Cucumis sativus])

HSP 1 Score: 278.9 bits (712), Expect = 6.0e-72
Identity = 138/161 (85.71%), Postives = 143/161 (88.82%), Query Frame = 1


Query: 14  TLEVNVFFTLLVY------DSLEDEYLAVHDGKTKCFHAMKTEWGFENLVSLDTFNVPSN 73
           TL++N F +L         D  E +   V DGKTKCFHAMKTEWGFENLVSLDTFNVPSN
Sbjct: 20  TLQINSFSSLKAAVAASNCDRYESQVFNVGDGKTKCFHAMKTEWGFENLVSLDTFNVPSN 79

Query: 74  GFLVDDYCAFGVDVFIMKFDGKGEILSSINQPENYKFTWKFKDFSQLRQNRYESNAFTVE 133
           GFLVDDYCAFGVDVFIMKFDGKGEILSSINQPENYKFTWKFKDFSQLRQNRYESNAFTVE
Sbjct: 80  GFLVDDYCAFGVDVFIMKFDGKGEILSSINQPENYKFTWKFKDFSQLRQNRYESNAFTVE 139

Query: 134 NYRWKISLYPNGYSQASSEYLSLFLALDSVEELPSRFSSVH 169
           NYRWKISLYPNGYSQASSEYLSLFLALDSVEELPSRFSSV+
Sbjct: 140 NYRWKISLYPNGYSQASSEYLSLFLALDSVEELPSRFSSVN 180

[Close]

BLAST of Csa5G432540 vs. NCBI nr
Match: gi|700195911|gb|KGN51088.1| (hypothetical protein Csa_5G432550 [Cucumis sativus])

HSP 1 Score: 183.0 bits (463), Expect = 4.5e-43
Identity = 90/162 (55.56%), Postives = 112/162 (69.14%), Query Frame = 1


Query: 1   MYLVTVEDEILTTTLEVNVFFTLLVYDSLEDEYLAVHDGKTKCFHAMKTEWGFENLVSLD 60
           +YLV V D IL+TT EVN  FT LVYD+L  +YL V DGK + F A KTEWG E L+ L+
Sbjct: 94  LYLVMVGDNILSTTSEVNAVFTFLVYDTLRGKYLTVQDGKMRRFSATKTEWGIEKLLPLN 153

Query: 61  TFNVPSNGFLVDDYCAFGVDVFIMKFD-GKGEILSSINQPENYKFTWKFKDFSQLRQNRY 120
           TF   SNGFLVDD C FGVD+F+M  D GKGE+ S I QP NYK+TWK  +FS+L  +  
Sbjct: 154 TFKDASNGFLVDDCCVFGVDIFVMNSDVGKGEVFSLIEQPNNYKYTWKLNNFSKLDSSLR 213

Query: 121 ESNAFTVENYRWKISLYPNGYSQASSEYLSLFLALDSVEELP 162
           E N FTVEN  WKI L+P+G  QA   + S++L L +++E P
Sbjct: 214 ECNPFTVENCCWKIRLFPSGDLQAKPGFFSMYLMLTNLKEFP 255

[Close]

BLAST of Csa5G432540 vs. NCBI nr
Match: gi|700195911|gb|KGN51088.1| (hypothetical protein Csa_5G432550 [Cucumis sativus])

HSP 1 Score: 41.2 bits (95), Expect = 2.1e+00
Identity = 24/86 (27.91%), Postives = 45/86 (52.33%), Query Frame = 1


Query: 92  ILSSINQPENYKFTWKFKDFSQLRQN-------RYESNAFTVENYRWKISLYPNGYSQAS 151
           +++S    +   +  K + FS L++        R+ES  F    Y WK++LYPNG  +  
Sbjct: 28  VVTSSRYEKPVHYILKIQSFSLLKEGLACSPRQRFESQKFNAGGYEWKLALYPNGDQRRD 87

Query: 152 -SEYLSLFLAL--DSVEELPSRFSSV 168
            S+++SL+L +  D++    S  ++V
Sbjct: 88  VSDHISLYLVMVGDNILSTTSEVNAV 113

HSP 2 Score: 183.0 bits (463), Expect = 4.5e-43
Identity = 90/162 (55.56%), Postives = 112/162 (69.14%), Query Frame = 1


Query: 1   MYLVTVEDEILTTTLEVNVFFTLLVYDSLEDEYLAVHDGKTKCFHAMKTEWGFENLVSLD 60
           +YLV V D IL+TT EVN  FT LVYD+L  +YL V DGK + F A KTEWG E L+ L+
Sbjct: 94  LYLVMVGDNILSTTSEVNAVFTFLVYDTLRGKYLTVQDGKMRRFSATKTEWGIEKLLPLN 153

Query: 61  TFNVPSNGFLVDDYCAFGVDVFIMKFD-GKGEILSSINQPENYKFTWKFKDFSQLRQNRY 120
           TF   SNGFLVDD C FGVD+F+M  D GKGE+ S I QP NYK+TWK  +FS+L  +  
Sbjct: 154 TFKDASNGFLVDDCCVFGVDIFVMNSDVGKGEVFSLIEQPNNYKYTWKLNNFSKLDSSLR 213

Query: 121 ESNAFTVENYRWKISLYPNGYSQASSEYLSLFLALDSVEELP 162
           E N FTVEN  WKI L+P+G  QA   + S++L L +++E P
Sbjct: 214 ECNPFTVENCCWKIRLFPSGDLQAKPGFFSMYLMLTNLKEFP 255

[Close]

BLAST of Csa5G432540 vs. NCBI nr
Match: gi|778708517|ref|XP_011656221.1| (PREDICTED: uncharacterized protein LOC105435677 [Cucumis sativus])

HSP 1 Score: 41.2 bits (95), Expect = 2.1e+00
Identity = 24/86 (27.91%), Postives = 45/86 (52.33%), Query Frame = 1


Query: 92  ILSSINQPENYKFTWKFKDFSQLRQN-------RYESNAFTVENYRWKISLYPNGYSQAS 151
           +++S    +   +  K + FS L++        R+ES  F    Y WK++LYPNG  +  
Sbjct: 28  VVTSSRYEKPVHYILKIQSFSLLKEGLACSPRQRFESQKFNAGGYEWKLALYPNGDQRRD 87

Query: 152 -SEYLSLFLAL--DSVEELPSRFSSV 168
            S+++SL+L +  D++    S  ++V
Sbjct: 88  VSDHISLYLVMVGDNILSTTSEVNAV 113

HSP 2 Score: 178.3 bits (451), Expect = 1.1e-41
Identity = 94/165 (56.97%), Postives = 116/165 (70.30%), Query Frame = 1


Query: 1   MYLVTVEDEILTTTLEVNVFFTLLVYDSLEDEYLAVHDGKTKCFHAMKTEWGFENLVSLD 60
           +YLV  EDE  TT+ EVNV+FT LVYD+L+D Y+   DG+ + FHAMK EWGFE  VSLD
Sbjct: 534 LYLVKAEDENATTS-EVNVWFTFLVYDTLKDRYMTFQDGEVRHFHAMKKEWGFEKFVSLD 593

Query: 61  TFNVPSNGFLVDDYCAFGVDVFIMKF-DGKGEILSSINQPENYKFTWKFKDFSQLRQNRY 120
           TFN  SNG LVDD CAFGVDV +MKF DGKGE+LS I QP+N   T     F +L   + 
Sbjct: 594 TFNDTSNGLLVDDCCAFGVDVIVMKFYDGKGEVLSFIKQPKN--CTQYSYIFIKLSIVQT 653

Query: 121 ESNAFTVENYRWKISLYPNGYSQASSEYLSLFLALDSVEELPSRF 165
           ES+ F +ENY+WK+ LYP G   A++ Y+SLFL  DS ++LP  F
Sbjct: 654 ESDPFNMENYKWKLQLYPRGDLNATTGYMSLFLMCDSFDKLPQGF 695

The following BLAST results are available for this feature:

BLAST of Csa5G432540 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KRR8_CUCSA	2.1e-92	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G432540 PE=4 SV=1	[more]
A0A0A0KND8_CUCSA	3.1e-43	55.56	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G432550 PE=4 SV=1	[more]
A0A0A0KND8_CUCSA	1.5e+00	27.91	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G432550 PE=4 SV=1	[more]
I1JQJ7_SOYBN	5.6e+00	31.75	Uncharacterized protein OS=Glycine max GN=GLYMA_03G212000 PE=4 SV=1	[more]
A0A061DUC7_THECC	4.9e-04	40.30	TRAF-like family protein, putative OS=Theobroma cacao GN=TCM_005650 PE=4 SV=1	[more]

BLAST of Csa5G432540 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G17380.1	3.3e-28	38.27	TRAF-like family protein	[more]
AT2G15710.1	3.2e-23	34.67	TRAF-like family protein	[more]
AT1G69660.1	2.1e-22	38.13	TRAF-like family protein	[more]
AT3G22080.1	6.0e-22	34.57	TRAF-like family protein	[more]
AT5G26260.1	8.7e-21	36.18	TRAF-like family protein	[more]

BLAST of Csa5G432540 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700195910\|gb\|KGN51087.1\|	3.1e-92	100.00	hypothetical protein Csa_5G432540 [Cucumis sativus]	[more]
gi\|778708515\|ref\|XP_011656220.1\|	6.0e-72	85.71	PREDICTED: uncharacterized protein LOC105435676 [Cucumis sativus]	[more]
gi\|700195911\|gb\|KGN51088.1\|	4.5e-43	55.56	hypothetical protein Csa_5G432550 [Cucumis sativus]	[more]
gi\|700195911\|gb\|KGN51088.1\|	2.1e+00	27.91	hypothetical protein Csa_5G432550 [Cucumis sativus]	[more]
gi\|778708517\|ref\|XP_011656221.1\|	2.1e+00	27.91	PREDICTED: uncharacterized protein LOC105435677 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002083	MATH/TRAF_dom
IPR008974	TRAF-like

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa5G432540.1	Csa5G432540.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002083	MATH/TRAF domain	PFAM	PF00917	MATH	coord: 5..83 score: 0.017coord: 108..161 score: 3.
IPR002083	MATH/TRAF domain	PROFILE	PS50144	MATH	coord: 1..81 score: 11.211coord: 101..168 score: 2
IPR008974	TRAF-like	GENE3D	G3DSA:2.60.210.10		coord: 89..158 score: 9.6E-14coord: 41..84 score: 1.
IPR008974	TRAF-like	unknown	SSF49599	TRAF domain-like	coord: 1..86 score: 1.01E-11coord: 99..156 score: 1.31

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa5G432540	Cla005889	Watermelon (97103) v1	cuwmB410
Csa5G432540	ClCG01G007470	Watermelon (Charleston Gray)	cuwcgB366
Csa5G432540	Lsi09G007910	Bottle gourd (USVL1VR-Ls)	culsiB324
Csa5G432540	MELO3C033957.2	Melon (DHL92) v3.6.1	cumedB341
Csa5G432540	Cla97C01G007830	Watermelon (97103) v2	cuwmbB338
Csa5G432540	Bhi12G000987	Wax gourd	cuwgoB454
Csa5G432540	CSPI05G15430	Wild cucumber (PI 183967)	cpicuB239
Csa5G432540	Cucsa.330550	Cucumber (Gy14) v1	cgycuB467
Csa5G432540	CsGy5G015220	Cucumber (Gy14) v2	cgybcuB223

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa5G432540	Cucurbita maxima (Rimu)	cmacuB303
Csa5G432540	Cucurbita maxima (Rimu)	cmacuB728
Csa5G432540	Cucurbita moschata (Rifu)	cmocuB291
Csa5G432540	Cucurbita moschata (Rifu)	cmocuB720
Csa5G432540	Melon (DHL92) v3.5.1	cumeB363
Csa5G432540	Cucurbita pepo (Zucchini)	cpecuB179
Csa5G432540	Cucurbita pepo (Zucchini)	cpecuB421
Csa5G432540	Silver-seed gourd	carcuB0510
Csa5G432540	Silver-seed gourd	carcuB0843