Csa5G347550 (gene) Cucumber (Chinese Long) v2

NameCsa5G347550
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr5 : 13339750 .. 13340010 (-)
   



The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGCAGCGGCGACGGAACGAAGAGAAAAGATTAGACACCGGCAGAATGTTGGCTTCGGCGAACCGCAAGGGCGAAGCTCGAGCGGCGACAAGGACTTGGACAGCACGGCGACGCAGATCTGGACCGTACACGACTGCCGGCTTCGTCGAACGGAAAAAGAAAACTGGTGGCGGCTATATGTTGGCGTCGAACGGAAGAGAAAAGAAAAGAAAAGAAGAGAGGAAGGGGGAGGGTGGCGGCGGTTGGAGGACGCGGTGA

mRNA sequence

ATGATGCAGCGGCGACGGAACGAAGAGAAAAGATTAGACACCGGCAGAATGTTGGCTTCGGCGAACCGCAAGGGCGAAGCTCGAGCGGCGACAAGGACTTGGACAGCACGGCGACGCAGATCTGGACCGTACACGACTGCCGGCTTCGTCGAACGGAAAAAGAAAACTGGTGGCGGCTATATGTTGGCGTCGAACGGAAGAGAAAAGAAAAGAAAAGAAGAGAGGAAGGGGGAGGGTGGCGGCGGTTGGAGGACGCGGTGA

Coding sequence (CDS)

ATGATGCAGCGGCGACGGAACGAAGAGAAAAGATTAGACACCGGCAGAATGTTGGCTTCGGCGAACCGCAAGGGCGAAGCTCGAGCGGCGACAAGGACTTGGACAGCACGGCGACGCAGATCTGGACCGTACACGACTGCCGGCTTCGTCGAACGGAAAAAGAAAACTGGTGGCGGCTATATGTTGGCGTCGAACGGAAGAGAAAAGAAAAGAAAAGAAGAGAGGAAGGGGGAGGGTGGCGGCGGTTGGAGGACGCGGTGA

Protein sequence

MMQRRRNEEKRLDTGRMLASANRKGEARAATRTWTARRRRSGPYTTAGFVERKKKTGGGYMLASNGREKKRKEERKGEGGGGWRTR*
BLAST of Csa5G347550 vs. TrEMBL
Match: A0A0A0KMW9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G347550 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 4.0e-42
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 1

Query: 1  MMQRRRNEEKRLDTGRMLASANRKGEARAATRTWTARRRRSGPYTTAGFVERKKKTGGGY 60
          MMQRRRNEEKRLDTGRMLASANRKGEARAATRTWTARRRRSGPYTTAGFVERKKKTGGGY
Sbjct: 1  MMQRRRNEEKRLDTGRMLASANRKGEARAATRTWTARRRRSGPYTTAGFVERKKKTGGGY 60

Query: 61 MLASNGREKKRKEERKGEGGGGWRTR 87
          MLASNGREKKRKEERKGEGGGGWRTR
Sbjct: 61 MLASNGREKKRKEERKGEGGGGWRTR 86

BLAST of Csa5G347550 vs. NCBI nr
Match: gi|700195751|gb|KGN50928.1| (hypothetical protein Csa_5G347550 [Cucumis sativus])

HSP 1 Score: 178.3 bits (451), Expect = 5.7e-42
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 1

Query: 1  MMQRRRNEEKRLDTGRMLASANRKGEARAATRTWTARRRRSGPYTTAGFVERKKKTGGGY 60
          MMQRRRNEEKRLDTGRMLASANRKGEARAATRTWTARRRRSGPYTTAGFVERKKKTGGGY
Sbjct: 1  MMQRRRNEEKRLDTGRMLASANRKGEARAATRTWTARRRRSGPYTTAGFVERKKKTGGGY 60

Query: 61 MLASNGREKKRKEERKGEGGGGWRTR 87
          MLASNGREKKRKEERKGEGGGGWRTR
Sbjct: 61 MLASNGREKKRKEERKGEGGGGWRTR 86

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KMW9_CUCSA4.0e-42100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_5G347550 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700195751|gb|KGN50928.1|5.7e-42100.00hypothetical protein Csa_5G347550 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa5G347550.1Csa5G347550.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None