Csa5G315890 (gene) Cucumber (Chinese Long) v2

NameCsa5G315890
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr5 : 12846643 .. 12846892 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGACAAGGACAGAAACACAGTTTGGAGAGGATCAGGGCGCCGTTAGTCTGAAGATTGAGAGGTTCGCCGTTGATGGAGTTGGAAATGAAGAGGGTTCGCTGTCAATCAGAAGATGGAGAGGTTCGCTGTCGATTAAAAGATGAAGAGGTAGGATGGAGGTTGTCGTCGATGGAGGTTCATCGTCGTCGGTCACCGAACGTTGGAGGTGGAGATAGCCAAAAGCCACTTGACTTACCGAGGCGTTAG

mRNA sequence

ATGAAGACAAGGACAGAAACACAGTTTGGAGAGGATCAGGGCGCCGTTAGTCTGAAGATTGAGAGGTTCGCCGTTGATGGAGTTGGAAATGAAGAGGATGAAGAGGTAGGATGGAGGTTGTCGTCGATGGAGGTTCATCGTCGTCGGTCACCGAACGTTGGAGGTGGAGATAGCCAAAAGCCACTTGACTTACCGAGGCGTTAG

Coding sequence (CDS)

ATGAAGACAAGGACAGAAACACAGTTTGGAGAGGATCAGGGCGCCGTTAGTCTGAAGATTGAGAGGTTCGCCGTTGATGGAGTTGGAAATGAAGAGGATGAAGAGGTAGGATGGAGGTTGTCGTCGATGGAGGTTCATCGTCGTCGGTCACCGAACGTTGGAGGTGGAGATAGCCAAAAGCCACTTGACTTACCGAGGCGTTAG

Protein sequence

MKTRTETQFGEDQGAVSLKIERFAVDGVGNEEDEEVGWRLSSMEVHRRRSPNVGGGDSQKPLDLPRR*
BLAST of Csa5G315890 vs. TrEMBL
Match: A0A0A0KMM2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G315890 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 2.1e-30
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 1

Query: 1  MKTRTETQFGEDQGAVSLKIERFAVDGVGNEEDEEVGWRLSSMEVHRRRSPNVGGGDSQK 60
          MKTRTETQFGEDQGAVSLKIERFAVDGVGNEEDEEVGWRLSSMEVHRRRSPNVGGGDSQK
Sbjct: 1  MKTRTETQFGEDQGAVSLKIERFAVDGVGNEEDEEVGWRLSSMEVHRRRSPNVGGGDSQK 60

Query: 61 PLDLPRR 68
          PLDLPRR
Sbjct: 61 PLDLPRR 67

BLAST of Csa5G315890 vs. NCBI nr
Match: gi|700195718|gb|KGN50895.1| (hypothetical protein Csa_5G315890 [Cucumis sativus])

HSP 1 Score: 139.0 bits (349), Expect = 3.0e-30
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 1

Query: 1  MKTRTETQFGEDQGAVSLKIERFAVDGVGNEEDEEVGWRLSSMEVHRRRSPNVGGGDSQK 60
          MKTRTETQFGEDQGAVSLKIERFAVDGVGNEEDEEVGWRLSSMEVHRRRSPNVGGGDSQK
Sbjct: 1  MKTRTETQFGEDQGAVSLKIERFAVDGVGNEEDEEVGWRLSSMEVHRRRSPNVGGGDSQK 60

Query: 61 PLDLPRR 68
          PLDLPRR
Sbjct: 61 PLDLPRR 67

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KMM2_CUCSA2.1e-30100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_5G315890 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700195718|gb|KGN50895.1|3.0e-30100.00hypothetical protein Csa_5G315890 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa5G315890.1Csa5G315890.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None