Csa5G284500 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa5G284500
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionNDX1 homeobox protein
LocationChr5 : 11769916 .. 11771545 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTAAAATATTTAACAAATCTGCAGATCTCAGAATATTTCAAAGCCTTGTGAGACGATGGTTGCAAGACCTCAAGGACGATATGAAGGAACCATTATTAGCTTGTTTTGATTTTAAAGAAAACCTCATTTATTCCACGAACCAGATAACTTGCAACTTGTATATGACTGTCACGCAGATGATTGATGGTTTCTCCAGTTGTCAGGTATATTCTGTCAATCAGATTATTGATTGTTTGTCCAAAACTTTTACTGTCATGAAGCCTCCTTCTATAATCAATTTGGCATATCCAAATTGAAAAATAAATTTGGCTTAAAAAATATTTTGGGCTGATACTTTTATTGAACTAATGATTTTTTTTCAAAATTTGTAACAACTTCATGAAATTTAGTAAGTTACCATCTAGATTCTATGGGGTAATTTCATAAATAACGTAGTTGGACATACTTATTCAAGAAATAGGCTCAACAGCTTGCATATAACAAATTATTTAGAGTAAAGAATGAAGTATTGTCACAAATAGGTATAAGACTCGTGGACAAGGTCCATGAGTTCAACAAGTTAAACTAAATACGTCATCAGCATGTTATATCAGTCAATAGTCGTGGACGAGGTCCACGATTTTGACCTAACTCGTGGACCAGGTTCACGCTTTTATCGATACTAGTGGACCAGCATTGTTTTAAATTGTACCCGTAGATCAGGTCTACGAGCATCACACTTTTTTTTCTTAAAGAAAAGAGGAATACACTTAATTAAATAGTCCATTATGATCTTTTGTAACATTGGTCAATTGAAAATCATGTTTAGAACGTTAATGCCAAACTATACATTTAAAAAGTACCAATACAAACTCAATTGAATATAATAGAAAGTCATGTGCCACACGGTGGTCCTCTTCTCGCACGCCTTCCCCGATGAAGCACAGGAACCTCGAAGTGTCGTTGATGATGAATTACGCCGACATACACGCAACCTCCAATCACAACCTTCCTTGTAGTCTTTTATTTTCTATATTTCAATATCATTTTAGCTCTTTGTGGATTCGGTCAATTTTGTAATGAAAAGAAATAGCTCAAATTCGAACCATGTTTATTTGCAAATGTTGCAAAATGAAAAGCTAGAACAATGTCCATAGCTTGGAGTTCAACTATAGACTTCCTATTCTCCCAAGTAGGAACAGCAAAATATCAATGCGGAATGTAATGCTTTGGTAGCTTTATTCTGTATTCTTAGGCTTTGGGTAAGAATTTTAACTGTTGCTGAAAATGTTGTAGACATGCAGATGCCATGGTACGCCATTAGAAGTCTATAGAAGCAAAGAGATAAAGGAATCTACCTGTGCAATTAGCGGGGATTTTCTGGATACCTCTGGCATAATGAAAAACTCAATAAAAGTTGGAGAGAAAACCATCCTGTTCCTGCCATCATCTCAGTGCCTTACCAAGTCTCAACAAAATGCTTCACAAATTAAATTTGACGTCGTACAACGAACCAACTTGGGAACCTTATGCGAAAGTAAGTTGGTTCTGAAACTCATCTTTTGTCAATTGCCCTCACTGCCTTCCCTGTTGATATGTTTACAATATTGGAATTTTCCTTGAGATATTAGGAGAATGTATGCGAAA

mRNA sequence

ATGTTTAAAATATTTAACAAATCTGCAGATCTCAGAATATTTCAAAGCCTTGTGAGACGATGGTTGCAAGACCTCAAGGACGATATGAAGGAACCATTATTAGCTTGTTTTGATTTTAAAGAAAACCTCATTTATTCCACGAACCAGATAACTTGCAACTTGTATATGACTGTCACGCAGATGATTGATGGTTTCTCCAGTTGTCAGACATGCAGATGCCATGGTACGCCATTAGAAGTCTATAGAAGCAAAGAGATAAAGGAATCTACCTGTGCAATTAGCGGGGATTTTCTGGATACCTCTGGCATAATGAAAAACTCAATAAAAGTTGGAGAGAAAACCATCCTGTTCCTGCCATCATCTCAGTGCCTTACCAAGTCTCAACAAAATGCTTCACAAATTAAATTTGACGTCGTACAACGAACCAACTTGGGAACCTTATGCGAAAGTAAGTTGGTTCTGAAACTCATCTTTTGTCAATTGCCCTCACTGCCTTCCCTGTTGATATGTTTACAATATTGGAATTTTCCTTGA

Coding sequence (CDS)

ATGTTTAAAATATTTAACAAATCTGCAGATCTCAGAATATTTCAAAGCCTTGTGAGACGATGGTTGCAAGACCTCAAGGACGATATGAAGGAACCATTATTAGCTTGTTTTGATTTTAAAGAAAACCTCATTTATTCCACGAACCAGATAACTTGCAACTTGTATATGACTGTCACGCAGATGATTGATGGTTTCTCCAGTTGTCAGACATGCAGATGCCATGGTACGCCATTAGAAGTCTATAGAAGCAAAGAGATAAAGGAATCTACCTGTGCAATTAGCGGGGATTTTCTGGATACCTCTGGCATAATGAAAAACTCAATAAAAGTTGGAGAGAAAACCATCCTGTTCCTGCCATCATCTCAGTGCCTTACCAAGTCTCAACAAAATGCTTCACAAATTAAATTTGACGTCGTACAACGAACCAACTTGGGAACCTTATGCGAAAGTAAGTTGGTTCTGAAACTCATCTTTTGTCAATTGCCCTCACTGCCTTCCCTGTTGATATGTTTACAATATTGGAATTTTCCTTGA

Protein sequence

MFKIFNKSADLRIFQSLVRRWLQDLKDDMKEPLLACFDFKENLIYSTNQITCNLYMTVTQMIDGFSSCQTCRCHGTPLEVYRSKEIKESTCAISGDFLDTSGIMKNSIKVGEKTILFLPSSQCLTKSQQNASQIKFDVVQRTNLGTLCESKLVLKLIFCQLPSLPSLLICLQYWNFP*
Homology
[Close]
BLAST of Csa5G284500 vs. TrEMBL
Match: A0A0A0KPK5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G284500 PE=4 SV=1)

HSP 1 Score: 362.8 bits (930), Expect = 2.3e-97
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 1 

Query: 1   MFKIFNKSADLRIFQSLVRRWLQDLKDDMKEPLLACFDFKENLIYSTNQITCNLYMTVTQ 60
           MFKIFNKSADLRIFQSLVRRWLQDLKDDMKEPLLACFDFKENLIYSTNQITCNLYMTVTQ
Sbjct: 1   MFKIFNKSADLRIFQSLVRRWLQDLKDDMKEPLLACFDFKENLIYSTNQITCNLYMTVTQ 60

Query: 61  MIDGFSSCQTCRCHGTPLEVYRSKEIKESTCAISGDFLDTSGIMKNSIKVGEKTILFLPS 120
           MIDGFSSCQTCRCHGTPLEVYRSKEIKESTCAISGDFLDTSGIMKNSIKVGEKTILFLPS
Sbjct: 61  MIDGFSSCQTCRCHGTPLEVYRSKEIKESTCAISGDFLDTSGIMKNSIKVGEKTILFLPS 120

Query: 121 SQCLTKSQQNASQIKFDVVQRTNLGTLCESKLVLKLIFCQLPSLPSLLICLQYWNFP 178
           SQCLTKSQQNASQIKFDVVQRTNLGTLCESKLVLKLIFCQLPSLPSLLICLQYWNFP
Sbjct: 121 SQCLTKSQQNASQIKFDVVQRTNLGTLCESKLVLKLIFCQLPSLPSLLICLQYWNFP 177

[Close]
BLAST of Csa5G284500 vs. TrEMBL
Match: A0A067JI58_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26339 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 5.1e-36
Identity = 76/140 (54.29%), Postives = 104/140 (74.29%), Query Frame = 1 

Query: 10  DLRIFQSLVRRWLQDLKDDMKEPLLACFDFKENLIYSTNQITCNLYMTVTQMIDGFSSCQ 69
           D R+F SLV+RWLQDLKDDM+EPL A F FK NL+ S NQI+C+L ++V+Q+IDGFS+CQ
Sbjct: 201 DTRVFHSLVKRWLQDLKDDMEEPLQARFIFKSNLVGSLNQISCSLSISVSQIIDGFSACQ 260

Query: 70  TCRCHGTPLEVYRSKEIKESTCAISGDFLDTSGIMKNSIKVGEKTILFLPSSQCLTKSQQ 129
           TCRCHG  L+     +    +C ++G+ L T+ ++ NS+KVG+KTILF+PS Q   K  Q
Sbjct: 261 TCRCHGIVLDNAVKDKADRPSCPVTGNDLGTANVIDNSVKVGDKTILFMPSFQSSMKLHQ 320

Query: 130 NASQIKFDVVQRTNLGTLCE 150
            +S I F+V++RTNL +L E
Sbjct: 321 VSSPIDFNVIERTNLSSLSE 340

[Close]
BLAST of Csa5G284500 vs. TrEMBL
Match: A0A067F2I7_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g047326mg PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 7.3e-35
Identity = 74/144 (51.39%), Postives = 100/144 (69.44%), Query Frame = 1 

Query: 10  DLRIFQSLVRRWLQDLKDDMKEPLLACFDFKENLIYSTNQITCNLYMTVTQMIDGFSSCQ 69
           D+++   LV+RWLQDLKDDM+EP+ A F FK NL  S NQITC+L  +V Q+IDGFS CQ
Sbjct: 198 DVKVLHGLVKRWLQDLKDDMEEPIQARFIFKSNLFGSLNQITCSLSASVNQIIDGFSPCQ 257

Query: 70  TCRCHGTPLEVYRSKEIKESTCAISGDFLDTSGIMKNSIKVGEKTILFLPSSQCLTKSQQ 129
           TCRCHG PL      +IKE  C I+   L+   +++NS+KVGE T+LF+PS Q   K Q+
Sbjct: 258 TCRCHGIPLSSTVKNKIKEPLCPITSHDLEKFDVIENSVKVGENTVLFMPSFQSSVKLQR 317

Query: 130 NASQIKFDVVQRTNLGTLCESKLV 154
            +S I F +++RT LG+L E  ++
Sbjct: 318 MSSPIDFKIIERTPLGSLNEGVII 341

[Close]
BLAST of Csa5G284500 vs. TrEMBL
Match: D7TC75_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0016g00050 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 1.3e-34
Identity = 71/144 (49.31%), Postives = 102/144 (70.83%), Query Frame = 1 

Query: 10  DLRIFQSLVRRWLQDLKDDMKEPLLACFDFKENLIYSTNQITCNLYMTVTQMIDGFSSCQ 69
           D+ +   LV+RWLQDLKDD++EPL ACF FK NL+ S NQI+CN  ++   + DGFS CQ
Sbjct: 192 DVCVLHGLVKRWLQDLKDDIEEPLQACFIFKTNLVGSVNQISCNFSISFNHITDGFSPCQ 251

Query: 70  TCRCHGTPLEVYRSKEIKESTCAISGDFLDTSGIMKNSIKVGEKTILFLPSSQCLTKSQQ 129
           TCRCHG PL+     +IK  +C ++G  L T  +++N +K+GE+T+LFLPS +   K QQ
Sbjct: 252 TCRCHGIPLDDVIGNKIKVPSCWVTGVKLGTYDLIENFVKIGEQTMLFLPSFKSFMKLQQ 311

Query: 130 NASQIKFDVVQRTNLGTLCESKLV 154
            +S I F++++RTNLG+L E  ++
Sbjct: 312 VSSPIDFNIIERTNLGSLSEGLII 335

[Close]
BLAST of Csa5G284500 vs. TrEMBL
Match: V4TAH9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030919mg PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 4.8e-34
Identity = 73/144 (50.69%), Postives = 99/144 (68.75%), Query Frame = 1 

Query: 10  DLRIFQSLVRRWLQDLKDDMKEPLLACFDFKENLIYSTNQITCNLYMTVTQMIDGFSSCQ 69
           D+++   LV+RWLQDLKDDM+EP+ A F FK NL  S NQITC+L  +V Q+IDGFS CQ
Sbjct: 198 DVKVLHGLVKRWLQDLKDDMEEPIQARFIFKSNLFGSLNQITCSLSASVNQIIDGFSPCQ 257

Query: 70  TCRCHGTPLEVYRSKEIKESTCAISGDFLDTSGIMKNSIKVGEKTILFLPSSQCLTKSQQ 129
           TCRCHG PL      +IKE  C I+   L    +++NS+KVGE T+LF+PS Q   K Q+
Sbjct: 258 TCRCHGIPLSSTVKNKIKEPLCPITSHDLGKFDVIENSVKVGENTVLFMPSFQSSVKLQR 317

Query: 130 NASQIKFDVVQRTNLGTLCESKLV 154
            +S I F +++R+ LG+L E  ++
Sbjct: 318 MSSPIDFKIIERSPLGSLNEGVII 341

[Close]
BLAST of Csa5G284500 vs. TAIR10
Match: AT5G07380.3 (AT5G07380.3 unknown protein)

HSP 1 Score: 125.9 bits (315), Expect = 2.4e-29
Identity = 61/144 (42.36%), Postives = 87/144 (60.42%), Query Frame = 1 

Query: 10  DLRIFQSLVRRWLQDLKDDMKEPLLACFDFKENLIYSTNQITCNLYMTVTQMIDGFSSCQ 69
           D +    L +RWLQ+LKDD  E L A   FK NL+ S N++ CN+     Q++DGF  CQ
Sbjct: 196 DGKSLHGLEKRWLQELKDDTGESLQAQIIFKSNLVGSVNKVFCNITAATNQIVDGFIPCQ 255

Query: 70  TCRCHGTPLEVYRSKEIKESTCAISGDFLDTSGIMKNSIKVGEKTILFLPSSQCLTKSQQ 129
           TCRCHG PL+    K  ++  C+++   L    +++NS+KVG +T LFLP+   L K   
Sbjct: 256 TCRCHGIPLQDSVEKPTEKLKCSVTNHELGKYDVIENSVKVGNRTTLFLPTIHSLQKLHP 315

Query: 130 NASQIKFDVVQRTNLGTLCESKLV 154
            +SQ+ F+V++RTNL +L E  L+
Sbjct: 316 VSSQVDFNVIERTNLTSLSEGLLL 339

[Close]
BLAST of Csa5G284500 vs. NCBI nr
Match: gi|700195657|gb|KGN50834.1| (hypothetical protein Csa_5G284500 [Cucumis sativus])

HSP 1 Score: 362.8 bits (930), Expect = 3.3e-97
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 1 

Query: 1   MFKIFNKSADLRIFQSLVRRWLQDLKDDMKEPLLACFDFKENLIYSTNQITCNLYMTVTQ 60
           MFKIFNKSADLRIFQSLVRRWLQDLKDDMKEPLLACFDFKENLIYSTNQITCNLYMTVTQ
Sbjct: 1   MFKIFNKSADLRIFQSLVRRWLQDLKDDMKEPLLACFDFKENLIYSTNQITCNLYMTVTQ 60

Query: 61  MIDGFSSCQTCRCHGTPLEVYRSKEIKESTCAISGDFLDTSGIMKNSIKVGEKTILFLPS 120
           MIDGFSSCQTCRCHGTPLEVYRSKEIKESTCAISGDFLDTSGIMKNSIKVGEKTILFLPS
Sbjct: 61  MIDGFSSCQTCRCHGTPLEVYRSKEIKESTCAISGDFLDTSGIMKNSIKVGEKTILFLPS 120

Query: 121 SQCLTKSQQNASQIKFDVVQRTNLGTLCESKLVLKLIFCQLPSLPSLLICLQYWNFP 178
           SQCLTKSQQNASQIKFDVVQRTNLGTLCESKLVLKLIFCQLPSLPSLLICLQYWNFP
Sbjct: 121 SQCLTKSQQNASQIKFDVVQRTNLGTLCESKLVLKLIFCQLPSLPSLLICLQYWNFP 177

[Close]
BLAST of Csa5G284500 vs. NCBI nr
Match: gi|778708440|ref|XP_004140472.2| (PREDICTED: uncharacterized protein LOC101221059 [Cucumis sativus])

HSP 1 Score: 289.7 bits (740), Expect = 3.6e-75
Identity = 143/154 (92.86%), Postives = 148/154 (96.10%), Query Frame = 1 

Query: 10  DLRIFQSLVRRWLQDLKDDMKEPLLACFDFKENLIYSTNQITCNLYMTVTQMIDGFSSCQ 69
           DLRIFQSLVRRWLQDLKDDMKEPLLACFDFKENLIYSTNQITCNLYMTVTQMIDGFSSCQ
Sbjct: 197 DLRIFQSLVRRWLQDLKDDMKEPLLACFDFKENLIYSTNQITCNLYMTVTQMIDGFSSCQ 256

Query: 70  TCRCHGTPLEVYRSKEIKESTCAISGDFLDTSGIMKNSIKVGEKTILFLPSSQCLTKSQQ 129
           TCRCHGTPLEVYRSKEIKESTCAISGDFLDTSGIMKNSIKVGEKTILFLPSSQCLTKSQQ
Sbjct: 257 TCRCHGTPLEVYRSKEIKESTCAISGDFLDTSGIMKNSIKVGEKTILFLPSSQCLTKSQQ 316

Query: 130 NASQIKFDVVQRTNLGTLCESKLVLKLIFCQLPS 164
           NASQIKFDVVQRTNLGTLCES +++   +  +PS
Sbjct: 317 NASQIKFDVVQRTNLGTLCES-VIMGAAYVVVPS 349

[Close]
BLAST of Csa5G284500 vs. NCBI nr
Match: gi|659109606|ref|XP_008454789.1| (PREDICTED: uncharacterized protein LOC103495109 isoform X1 [Cucumis melo])

HSP 1 Score: 272.7 bits (696), Expect = 4.5e-70
Identity = 133/154 (86.36%), Postives = 144/154 (93.51%), Query Frame = 1 

Query: 10  DLRIFQSLVRRWLQDLKDDMKEPLLACFDFKENLIYSTNQITCNLYMTVTQMIDGFSSCQ 69
           D+RIFQSLVRRWLQDLKDDMKEPLLACFDFKENLIYSTNQITCNLY TVTQMIDGFS+CQ
Sbjct: 194 DVRIFQSLVRRWLQDLKDDMKEPLLACFDFKENLIYSTNQITCNLYTTVTQMIDGFSTCQ 253

Query: 70  TCRCHGTPLEVYRSKEIKESTCAISGDFLDTSGIMKNSIKVGEKTILFLPSSQCLTKSQQ 129
           TCRCHG PLEVYRS+ IKES+CAISGDFLDTSGIMKNS+KVGEKTILFLPS+QCL KSQQ
Sbjct: 254 TCRCHGMPLEVYRSEGIKESSCAISGDFLDTSGIMKNSMKVGEKTILFLPSAQCLDKSQQ 313

Query: 130 NASQIKFDVVQRTNLGTLCESKLVLKLIFCQLPS 164
           NASQIKFDVVQRTNLGTLCES +++   +  +PS
Sbjct: 314 NASQIKFDVVQRTNLGTLCES-IIMGAAYVVVPS 346

[Close]
BLAST of Csa5G284500 vs. NCBI nr
Match: gi|659109608|ref|XP_008454790.1| (PREDICTED: uncharacterized protein LOC103495109 isoform X2 [Cucumis melo])

HSP 1 Score: 272.7 bits (696), Expect = 4.5e-70
Identity = 133/154 (86.36%), Postives = 144/154 (93.51%), Query Frame = 1 

Query: 10  DLRIFQSLVRRWLQDLKDDMKEPLLACFDFKENLIYSTNQITCNLYMTVTQMIDGFSSCQ 69
           D+RIFQSLVRRWLQDLKDDMKEPLLACFDFKENLIYSTNQITCNLY TVTQMIDGFS+CQ
Sbjct: 190 DVRIFQSLVRRWLQDLKDDMKEPLLACFDFKENLIYSTNQITCNLYTTVTQMIDGFSTCQ 249

Query: 70  TCRCHGTPLEVYRSKEIKESTCAISGDFLDTSGIMKNSIKVGEKTILFLPSSQCLTKSQQ 129
           TCRCHG PLEVYRS+ IKES+CAISGDFLDTSGIMKNS+KVGEKTILFLPS+QCL KSQQ
Sbjct: 250 TCRCHGMPLEVYRSEGIKESSCAISGDFLDTSGIMKNSMKVGEKTILFLPSAQCLDKSQQ 309

Query: 130 NASQIKFDVVQRTNLGTLCESKLVLKLIFCQLPS 164
           NASQIKFDVVQRTNLGTLCES +++   +  +PS
Sbjct: 310 NASQIKFDVVQRTNLGTLCES-IIMGAAYVVVPS 342

[Close]
BLAST of Csa5G284500 vs. NCBI nr
Match: gi|659109610|ref|XP_008454791.1| (PREDICTED: uncharacterized protein LOC103495109 isoform X3 [Cucumis melo])

HSP 1 Score: 272.7 bits (696), Expect = 4.5e-70
Identity = 133/154 (86.36%), Postives = 144/154 (93.51%), Query Frame = 1 

Query: 10  DLRIFQSLVRRWLQDLKDDMKEPLLACFDFKENLIYSTNQITCNLYMTVTQMIDGFSSCQ 69
           D+RIFQSLVRRWLQDLKDDMKEPLLACFDFKENLIYSTNQITCNLY TVTQMIDGFS+CQ
Sbjct: 178 DVRIFQSLVRRWLQDLKDDMKEPLLACFDFKENLIYSTNQITCNLYTTVTQMIDGFSTCQ 237

Query: 70  TCRCHGTPLEVYRSKEIKESTCAISGDFLDTSGIMKNSIKVGEKTILFLPSSQCLTKSQQ 129
           TCRCHG PLEVYRS+ IKES+CAISGDFLDTSGIMKNS+KVGEKTILFLPS+QCL KSQQ
Sbjct: 238 TCRCHGMPLEVYRSEGIKESSCAISGDFLDTSGIMKNSMKVGEKTILFLPSAQCLDKSQQ 297

Query: 130 NASQIKFDVVQRTNLGTLCESKLVLKLIFCQLPS 164
           NASQIKFDVVQRTNLGTLCES +++   +  +PS
Sbjct: 298 NASQIKFDVVQRTNLGTLCES-IIMGAAYVVVPS 330

The following BLAST results are available for this feature:
BLAST of Csa5G284500 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KPK5_CUCSA2.3e-97100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_5G284500 PE=4 SV=1[more]
A0A067JI58_JATCU5.1e-3654.29Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26339 PE=4 SV=1[more]
A0A067F2I7_CITSI7.3e-3551.39Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g047326mg PE=4 S... [more]
D7TC75_VITVI1.3e-3449.31Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0016g00050 PE=4 SV=... [more]
V4TAH9_9ROSI4.8e-3450.69Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030919mg PE=4 SV=1[more]
BLAST of Csa5G284500 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G07380.32.4e-2942.36 unknown protein[more]
BLAST of Csa5G284500 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700195657|gb|KGN50834.1|3.3e-97100.00hypothetical protein Csa_5G284500 [Cucumis sativus][more]
gi|778708440|ref|XP_004140472.2|3.6e-7592.86PREDICTED: uncharacterized protein LOC101221059 [Cucumis sativus][more]
gi|659109606|ref|XP_008454789.1|4.5e-7086.36PREDICTED: uncharacterized protein LOC103495109 isoform X1 [Cucumis melo][more]
gi|659109608|ref|XP_008454790.1|4.5e-7086.36PREDICTED: uncharacterized protein LOC103495109 isoform X2 [Cucumis melo][more]
gi|659109610|ref|XP_008454791.1|4.5e-7086.36PREDICTED: uncharacterized protein LOC103495109 isoform X3 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa5G284500.1Csa5G284500.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR38390FAMILY NOT NAMEDcoord: 8..149
score: 1.8

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa5G284500Cp4.1LG01g07620Cucurbita pepo (Zucchini)cpecuB429
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa5G284500Cucumber (Gy14) v1cgycuB288
Csa5G284500Cucurbita moschata (Rifu)cmocuB756
Csa5G284500Melon (DHL92) v3.5.1cumeB375
Csa5G284500Bottle gourd (USVL1VR-Ls)culsiB374
Csa5G284500Cucumber (Gy14) v2cgybcuB232
Csa5G284500Melon (DHL92) v3.6.1cumedB358