Csa5G155510 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTCCATTTTCTTCTCTCAATTCCAATCCCCACCTCTAATGGCCGCAACCACCACCCCCCTTCTTTCATAAACCCCAAATGGGCAAAGCCTTCAAATGGTTCCGCGGCCTTCTCCGTCTCAAGAAACCACACCCATTTCTCAATCCTTCTCCTACTAATTCGAAGCTCAACAACCTCAAATGCCACTTCAAGGATAACGAGAAAACCCACCACCATGACCCCCCCGTCACCTTCCCTCCCATCGTCAAGATCACCACCACCCGACGGACGACGCCCACGGCGGACCCTAACTCTGCTGCCATCAAAATCCAGGCTGCATTTCGTGGATTTCTGGTTTGTTCCTAAGTTACTTCTTCTCGATCCAACCACAAATGTTTAACATTATTTTTCTAAATAAGAGTGATTTTTTTTTTTTAAAAAAAGAATAACCATAATGTTTTAATTAGTTGAGCAAGTTCATACCAATTACGCTTTCTTCGTTTCAGACAAATTAGAGAGGTTATAAATTTGAAGCACCGACCCCTTGAGGAAGGTCACAAGAAGCATTCTATTTGGACTACACCTTACCGAACTAAAAGCTTCATCTTTTTCATTTTACCTTAATTAAAGTTCACCTTTTTTTTCAATGGGGTTCGATGGGATGAAATTTCACTTTCTTAACCTTGCTTGAATTTTATTTTTGTCTAAAGAAAACTTGTGAATAGGGTTTAAGTTGAGAAAGAAGCGTATATTCAGGGAGTAGATTTTCAATTGAACAATATTTCATTCTCTATTATTTAGTTTAGAATCTCAACTAATTCCATTGTTTAAATCTCAATCCCTTTCACCTTGGGATTACCAAAAAGCATCCTTCTTTTTTGTTTCTTTCAATCTTAGCTGTTGAGTGTGTTACACACTCAATATCTCCATCTCAAATCAAATCAAAAGCATTTCTTTTTAAAACTAAAATAATAAAATATAACAAAGTTTTTGGAGTTCAAAGAGAAAGGAGTAGGGATCTATATTTGTTACATGGGAACATGAAAGTCTCTTCGAGACGGCATCGTTCGGAGGAAAACGGTGTCGTGTAATCACTTCATATGAAAAAACAAAGCCGTGTGGGACCCAGCCCGTATTAGCTCTGCCATCTGTCCTTTCAAAATCTCCCTTCCAATGTAAGGTGAAAAGGAGCTTTCACCATATTAATACCTTCAGATTCTCTCCTTTGTACTTTTACATTTATTTTTTTCTTTTATATATTCTTTAGTAAATAAGTAAATACATAAATAACAAAAATGAAAAGTTCAGGTTTCTCATGATGAGTCTTGCTATTTTTGAATGCTGTATCTTAAATTTACTTTCTGAATTTCACTTTTTCATCTTTCCTTCAAATAGAAAATCCATTGTGAGATGTTCCTTTTCTTTCTTTTTATCATTTAGATTGAAAAAAATGTATATGTGTTACTTTTTCTTTTCTTCCTTTGGATATGAGGGAGACCCCTTTGTCTTCTTCATTCCCAAGCTCTTTAAAAGGAAAAAAACTTGATCTGTTCCTAGTCAAAAAAAGGTGCTTCTTTACTTTTTATGGTAAACAACTTACCTTTCACCTTTTTTAACACTAACCCATGTGAAAATATTTAGAATTTTAGGGACCCAATTGAGATATTGTAATAATTGAGGGGTTAAACTCTAAATAAAATATCAAACTGAGGATTGTTCTTGGAAATCCCTAGTGGGGTTGGTTTGTCTGTTTAGGTGGAAATGGAATTAGGCCTTCTGTTTGGCTACAGTTTTTTATGTTATCTTTATTTTGGAATTACAGGGGAAAAAACTAATTTTAATTTATTTTTTGGTTTTTTTTCTTTTTATAATTTTTCTAAAATATTTGTGGAAATCAACCTCTTGTCAGTAAATTAAGACCTTTGTATGTTTAGGTATACATTTTAAACGTTGCATGATATAAATGAAATTTTGGGTTGATTAGGAGTATTTAATGCTTTGTTGTACTGAACTGGAAAAACCATGGCTGTATGGAAGCACGGATGGCTTTCTGTAATGTCTCTGTCTTCTTCATGTTTTGCCAGCCTAAATCTTTAATGGGAATTCATTATGGTTTGATTTCCTTTGTTTGTTATTGTTTTTTCTGAAAGGCAAGGAAGGCATTAAGGGCACTAAGAGGGTTGGTGAGACTTCAGGCATTGGTTCGAGGCCATATCGAGAGGAAGCGAACAGCCGAATGGATAAAGAGGATGCAGGCATTACTGAGAGCACAAGCACGGGCACGAGCAGGACGGAGTCAATCTTCTTTCGATTTCTTGCATTCGGATATCAAATTTTCCAGCTTCTCTTCTATTGTAAGACAGTGTGTAGTGTTTCTCATTCGCAGTATCAAACATGGGTGGACTGTTAAAAGGTTGTTTGTTTTGTAGGATCCTGTTACCCCAGAAAAATTTGAGCACAGCCCACATACTAAGAGCACTAGGTTTAAACAGATGCAGAGGAGTGGCTCAAGATTTACAACTATTGATGCTGAAAACATTGATAGAATCCTTGAAATTGAGAATGAAAAAGCTCACTTTAAGTTGAAACCCAAGAGCCTTTTTAGTTCCATCAAGAATGCTCTATCTTCTTCTGATGTGCCTTCAAAAGAGCCTCCAAGTTCATTTTCCTGTGAAACCCAATGTTTTAGTCCATTTAAATTCTCTCATGAAGTTGAGGAGAACTCTTTCTTTTCTGTCTCATCAAGGGGTGGTAGTACAAAGAAAAGCCCCTTCACTCCGGCTAAGAGTGACAGTACGAGAAGCTATTTCAGTGGCGACTCTGAATATCCGAGTTACATGGCCTGTACTGAATCTTCAAGAGCCAAAATGAGATCTCATAGCGCTCCAAGACAGCGTCCTCAGTATGAAAGATCGAGTTCTGCAAAACGGGGTTCTGCTTTCATTGTTGGCGAATCGAGACTAACTGCACAGCAGGTATCAACATTGCGGTCTAATTTTATCGGGAAAGCCTACCCCGGTTCTGGTCGACTGGACAAACTTGGGATGCCTGTGGGTTACAGATACTGATGCCTCTAATATTTCTCTTCTTCATCTCCTACTTCACTAGCGTAGTAGCCTTATTTTGCTAACTTATATTAGTAGTCAGTCCTAATAATGAATATGTGAAAATCTGATTGGAACTTTGAGAGCTGGAAACGGTCAAGTTTATAATCCTAGAACTAGAAAGTCATTATCACTGTTCTTAAAATTGTCTGTTTAGTATTGTCTGTTTACATGGTAATGTATGTTTTCCTCATGTCACCCTCATTTTCCCAATAGCTTCAGAAGAAACACGAAATACCAAAAGACCTCCAAGGTCCAAGGTGACGGGAAATAATCAATGCTATTAATCTGAAATAGATCACAGATCTCTACGGTAAACAATTGTAAGGACAAGGCGGGAAAAGAATAAAGAAAAAGCCTCATAAACTATTCATATACATGAAGTAAAAAGCAAACTAAAACCCAAGATCCCAAAAAGTGTAACTATGTACACACAAACTAAGAGAAACTTAATTTGCGCAGTCCCATCTTGAGGTTGGCACACA ATGGGCAAAGCCTTCAAATGGTTCCGCGGCCTTCTCCGTCTCAAGAAACCACACCCATTTCTCAATCCTTCTCCTACTAATTCGAAGCTCAACAACCTCAAATGCCACTTCAAGGATAACGAGAAAACCCACCACCATGACCCCCCCGTCACCTTCCCTCCCATCGTCAAGATCACCACCACCCGACGGACGACGCCCACGGCGGACCCTAACTCTGCTGCCATCAAAATCCAGGCTGCATTTCGTGGATTTCTGGCAAGGAAGGCATTAAGGGCACTAAGAGGGTTGGTGAGACTTCAGGCATTGGTTCGAGGCCATATCGAGAGGAAGCGAACAGCCGAATGGATAAAGAGGATGCAGGCATTACTGAGAGCACAAGCACGGGCACGAGCAGGACGGAGTCAATCTTCTTTCGATTTCTTGCATTCGGATATCAAATTTTCCAGCTTCTCTTCTATTGATCCTGTTACCCCAGAAAAATTTGAGCACAGCCCACATACTAAGAGCACTAGGTTTAAACAGATGCAGAGGAGTGGCTCAAGATTTACAACTATTGATGCTGAAAACATTGATAGAATCCTTGAAATTGAGAATGAAAAAGCTCACTTTAAGTTGAAACCCAAGAGCCTTTTTAGTTCCATCAAGAATGCTCTATCTTCTTCTGATGTGCCTTCAAAAGAGCCTCCAAGTTCATTTTCCTGTGAAACCCAATGTTTTAGTCCATTTAAATTCTCTCATGAAGTTGAGGAGAACTCTTTCTTTTCTGTCTCATCAAGGGGTGGTAGTACAAAGAAAAGCCCCTTCACTCCGGCTAAGAGTGACAGTACGAGAAGCTATTTCAGTGGCGACTCTGAATATCCGAGTTACATGGCCTGTACTGAATCTTCAAGAGCCAAAATGAGATCTCATAGCGCTCCAAGACAGCGTCCTCAGTATGAAAGATCGAGTTCTGCAAAACGGGGTTCTGCTTTCATTGTTGGCGAATCGAGACTAACTGCACAGCAGGTATCAACATTGCGGTCTAATTTTATCGGGAAAGCCTACCCCGGTTCTGGTCGACTGGACAAACTTGGGATGCCTGTGGGTTACAGATACTGA ATGGGCAAAGCCTTCAAATGGTTCCGCGGCCTTCTCCGTCTCAAGAAACCACACCCATTTCTCAATCCTTCTCCTACTAATTCGAAGCTCAACAACCTCAAATGCCACTTCAAGGATAACGAGAAAACCCACCACCATGACCCCCCCGTCACCTTCCCTCCCATCGTCAAGATCACCACCACCCGACGGACGACGCCCACGGCGGACCCTAACTCTGCTGCCATCAAAATCCAGGCTGCATTTCGTGGATTTCTGGCAAGGAAGGCATTAAGGGCACTAAGAGGGTTGGTGAGACTTCAGGCATTGGTTCGAGGCCATATCGAGAGGAAGCGAACAGCCGAATGGATAAAGAGGATGCAGGCATTACTGAGAGCACAAGCACGGGCACGAGCAGGACGGAGTCAATCTTCTTTCGATTTCTTGCATTCGGATATCAAATTTTCCAGCTTCTCTTCTATTGATCCTGTTACCCCAGAAAAATTTGAGCACAGCCCACATACTAAGAGCACTAGGTTTAAACAGATGCAGAGGAGTGGCTCAAGATTTACAACTATTGATGCTGAAAACATTGATAGAATCCTTGAAATTGAGAATGAAAAAGCTCACTTTAAGTTGAAACCCAAGAGCCTTTTTAGTTCCATCAAGAATGCTCTATCTTCTTCTGATGTGCCTTCAAAAGAGCCTCCAAGTTCATTTTCCTGTGAAACCCAATGTTTTAGTCCATTTAAATTCTCTCATGAAGTTGAGGAGAACTCTTTCTTTTCTGTCTCATCAAGGGGTGGTAGTACAAAGAAAAGCCCCTTCACTCCGGCTAAGAGTGACAGTACGAGAAGCTATTTCAGTGGCGACTCTGAATATCCGAGTTACATGGCCTGTACTGAATCTTCAAGAGCCAAAATGAGATCTCATAGCGCTCCAAGACAGCGTCCTCAGTATGAAAGATCGAGTTCTGCAAAACGGGGTTCTGCTTTCATTGTTGGCGAATCGAGACTAACTGCACAGCAGGTATCAACATTGCGGTCTAATTTTATCGGGAAAGCCTACCCCGGTTCTGGTCGACTGGACAAACTTGGGATGCCTGTGGGTTACAGATACTGA MGKAFKWFRGLLRLKKPHPFLNPSPTNSKLNNLKCHFKDNEKTHHHDPPVTFPPIVKITTTRRTTPTADPNSAAIKIQAAFRGFLARKALRALRGLVRLQALVRGHIERKRTAEWIKRMQALLRAQARARAGRSQSSFDFLHSDIKFSSFSSIDPVTPEKFEHSPHTKSTRFKQMQRSGSRFTTIDAENIDRILEIENEKAHFKLKPKSLFSSIKNALSSSDVPSKEPPSSFSCETQCFSPFKFSHEVEENSFFSVSSRGGSTKKSPFTPAKSDSTRSYFSGDSEYPSYMACTESSRAKMRSHSAPRQRPQYERSSSAKRGSAFIVGESRLTAQQVSTLRSNFIGKAYPGSGRLDKLGMPVGYRY*
BLAST of Csa5G155510 vs. Swiss-Prot
Match: IQD14_ARATH (Protein IQ-DOMAIN 14 OS=Arabidopsis thaliana GN=IQD14 PE=1 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 2.2e-10 Identity = 83/322 (25.78%), Postives = 141/322 (43.79%), Query Frame = 1
BLAST of Csa5G155510 vs. Swiss-Prot
Match: IQD31_ARATH (Protein IQ-DOMAIN 31 OS=Arabidopsis thaliana GN=IQD31 PE=1 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 9.2e-09 Identity = 30/65 (46.15%), Postives = 43/65 (66.15%), Query Frame = 1
HSP 2 Score: 38.5 bits (88), Expect = 1.8e-01 Identity = 33/135 (24.44%), Postives = 61/135 (45.19%), Query Frame = 1
BLAST of Csa5G155510 vs. Swiss-Prot
Match: IQD1_ARATH (Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana GN=IQD1 PE=1 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 9.5e-06 Identity = 30/90 (33.33%), Postives = 48/90 (53.33%), Query Frame = 1
BLAST of Csa5G155510 vs. Swiss-Prot
Match: IQD32_ARATH (Protein IQ-DOMAIN 32 OS=Arabidopsis thaliana GN=IQD32 PE=1 SV=3) HSP 1 Score: 52.8 bits (125), Expect = 9.5e-06 Identity = 27/63 (42.86%), Postives = 39/63 (61.90%), Query Frame = 1
HSP 2 Score: 32.0 bits (71), Expect = 1.7e+01 Identity = 15/46 (32.61%), Postives = 24/46 (52.17%), Query Frame = 1
BLAST of Csa5G155510 vs. TrEMBL
Match: A0A0A0KKC1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G155510 PE=4 SV=1) HSP 1 Score: 733.4 bits (1892), Expect = 1.3e-208 Identity = 365/365 (100.00%), Postives = 365/365 (100.00%), Query Frame = 1
BLAST of Csa5G155510 vs. TrEMBL
Match: M5WY06_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005786mg PE=4 SV=1) HSP 1 Score: 332.8 bits (852), Expect = 5.3e-88 Identity = 213/445 (47.87%), Postives = 267/445 (60.00%), Query Frame = 1
BLAST of Csa5G155510 vs. TrEMBL
Match: A0A072UPT6_MEDTR (Calmodulin-binding protein OS=Medicago truncatula GN=MTR_4g102840 PE=4 SV=1) HSP 1 Score: 273.1 bits (697), Expect = 5.0e-70 Identity = 184/431 (42.69%), Postives = 234/431 (54.29%), Query Frame = 1
BLAST of Csa5G155510 vs. TrEMBL
Match: A0A0B0MWY3_GOSAR (Protein IQ-DOMAIN 31-like protein OS=Gossypium arboreum GN=F383_28983 PE=4 SV=1) HSP 1 Score: 261.9 bits (668), Expect = 1.1e-66 Identity = 165/350 (47.14%), Postives = 212/350 (60.57%), Query Frame = 1
BLAST of Csa5G155510 vs. TrEMBL
Match: A0A059C1J2_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E00539 PE=4 SV=1) HSP 1 Score: 261.9 bits (668), Expect = 1.1e-66 Identity = 169/355 (47.61%), Postives = 216/355 (60.85%), Query Frame = 1
BLAST of Csa5G155510 vs. TAIR10
Match: AT4G23060.1 (AT4G23060.1 IQ-domain 22) HSP 1 Score: 198.7 bits (504), Expect = 6.0e-51 Identity = 142/327 (43.43%), Postives = 191/327 (58.41%), Query Frame = 1
BLAST of Csa5G155510 vs. TAIR10
Match: AT5G62070.1 (AT5G62070.1 IQ-domain 23) HSP 1 Score: 140.2 bits (352), Expect = 2.5e-33 Identity = 112/303 (36.96%), Postives = 158/303 (52.15%), Query Frame = 1
BLAST of Csa5G155510 vs. TAIR10
Match: AT5G07240.1 (AT5G07240.1 IQ-domain 24) HSP 1 Score: 138.7 bits (348), Expect = 7.4e-33 Identity = 101/267 (37.83%), Postives = 138/267 (51.69%), Query Frame = 1
BLAST of Csa5G155510 vs. TAIR10
Match: AT3G16490.1 (AT3G16490.1 IQ-domain 26) HSP 1 Score: 116.7 bits (291), Expect = 3.0e-26 Identity = 94/269 (34.94%), Postives = 139/269 (51.67%), Query Frame = 1
BLAST of Csa5G155510 vs. TAIR10
Match: AT1G51960.1 (AT1G51960.1 IQ-domain 27) HSP 1 Score: 104.4 bits (259), Expect = 1.5e-22 Identity = 88/269 (32.71%), Postives = 128/269 (47.58%), Query Frame = 1
BLAST of Csa5G155510 vs. NCBI nr
Match: gi|449452484|ref|XP_004143989.1| (PREDICTED: protein IQ-DOMAIN 14 isoform X1 [Cucumis sativus]) HSP 1 Score: 733.4 bits (1892), Expect = 1.9e-208 Identity = 365/365 (100.00%), Postives = 365/365 (100.00%), Query Frame = 1
BLAST of Csa5G155510 vs. NCBI nr
Match: gi|659073720|ref|XP_008437216.1| (PREDICTED: protein IQ-DOMAIN 14 isoform X1 [Cucumis melo]) HSP 1 Score: 701.4 bits (1809), Expect = 8.1e-199 Identity = 351/365 (96.16%), Postives = 356/365 (97.53%), Query Frame = 1
BLAST of Csa5G155510 vs. NCBI nr
Match: gi|778699744|ref|XP_011654768.1| (PREDICTED: protein IQ-DOMAIN 14 isoform X2 [Cucumis sativus]) HSP 1 Score: 550.1 bits (1416), Expect = 3.0e-153 Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 1
BLAST of Csa5G155510 vs. NCBI nr
Match: gi|659073722|ref|XP_008437217.1| (PREDICTED: protein IQ-DOMAIN 14 isoform X2 [Cucumis melo]) HSP 1 Score: 545.0 bits (1403), Expect = 9.7e-152 Identity = 274/278 (98.56%), Postives = 277/278 (99.64%), Query Frame = 1
BLAST of Csa5G155510 vs. NCBI nr
Match: gi|595857264|ref|XP_007210506.1| (hypothetical protein PRUPE_ppa005786mg [Prunus persica]) HSP 1 Score: 332.8 bits (852), Expect = 7.6e-88 Identity = 213/445 (47.87%), Postives = 267/445 (60.00%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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