Csa5G155430 (gene) Cucumber (Chinese Long) v2

NameCsa5G155430
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionPutative thaumatin-like protein; contains IPR001938 (Thaumatin)
LocationChr5 : 5265480 .. 5265665 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTGCCTCTCCCAGAGGGCAGCGGCAAAGAACTTAGTTCTGGTCAGGCTTGGAATTTCGATGTGAGACCTGGCACTGCCGGAGCTCGTGTTTGGGCTCGAACCAACTGCAACTTCGATGCCTCTGGACGCGGCCATTTTGAAACTGGAGACTGCGGTGGCCTCCTCTCTTGTCAAGGTTATTAA

mRNA sequence

ATGCTGCCTCTCCCAGAGGGCAGCGGCAAAGAACTTAGTTCTGGTCAGGCTTGGAATTTCGATGTGAGACCTGGCACTGCCGGAGCTCGTGTTTGGGCTCGAACCAACTGCAACTTCGATGCCTCTGGACGCGGCCATTTTGAAACTGGAGACTGCGGTGGCCTCCTCTCTTGTCAAGGTTATTAA

Coding sequence (CDS)

ATGCTGCCTCTCCCAGAGGGCAGCGGCAAAGAACTTAGTTCTGGTCAGGCTTGGAATTTCGATGTGAGACCTGGCACTGCCGGAGCTCGTGTTTGGGCTCGAACCAACTGCAACTTCGATGCCTCTGGACGCGGCCATTTTGAAACTGGAGACTGCGGTGGCCTCCTCTCTTGTCAAGGTTATTAA

Protein sequence

MLPLPEGSGKELSSGQAWNFDVRPGTAGARVWARTNCNFDASGRGHFETGDCGGLLSCQGY*
BLAST of Csa5G155430 vs. Swiss-Prot
Match: PRR2_TOBAC (Pathogenesis-related protein R minor form OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 3.1e-18
Identity = 36/55 (65.45%), Postives = 43/55 (78.18%), Query Frame = 1

Query: 7  GSGKELSSGQAWNFDVRPGTAGARVWARTNCNFDASGRGHFETGDCGGLLSCQGY 62
          G G++L+SGQ+W+ +V PGT  AR+W RTNCNFD SGRG+ ETGDC G+L CQGY
Sbjct: 45 GGGRQLNSGQSWSINVNPGTVQARIWGRTNCNFDGSGRGNCETGDCNGMLECQGY 99

BLAST of Csa5G155430 vs. Swiss-Prot
Match: ALL13_OLEEU (Thaumatin-like protein OS=Olea europaea PE=1 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 4.1e-18
Identity = 37/55 (67.27%), Postives = 40/55 (72.73%), Query Frame = 1

Query: 7  GSGKELSSGQAWNFDVRPGTAGARVWARTNCNFDASGRGHFETGDCGGLLSCQGY 62
          G G+ L  GQ+WN +V PGT  AR+W RTNCNFDA+GRG  ETGDC GLL CQGY
Sbjct: 44 GGGRRLDQGQSWNINVAPGTTQARIWGRTNCNFDANGRGQCETGDCNGLLECQGY 98

BLAST of Csa5G155430 vs. Swiss-Prot
Match: PRR1_TOBAC (Pathogenesis-related protein R major form OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 6.9e-18
Identity = 36/55 (65.45%), Postives = 41/55 (74.55%), Query Frame = 1

Query: 7  GSGKELSSGQAWNFDVRPGTAGARVWARTNCNFDASGRGHFETGDCGGLLSCQGY 62
          G G+ L SGQ+W+ +V PGT  AR+W RTNCNFD SGRG+ ETGDC G+L CQGY
Sbjct: 45 GGGRRLDSGQSWSINVNPGTVQARIWGRTNCNFDGSGRGNCETGDCNGMLECQGY 99

BLAST of Csa5G155430 vs. Swiss-Prot
Match: P21_SOYBN (Protein P21 OS=Glycine max PE=1 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 1.3e-16
Identity = 36/58 (62.07%), Postives = 42/58 (72.41%), Query Frame = 1

Query: 4  LPEGSGKELSSGQAWNFDVRPGTAGARVWARTNCNFDASGRGHFETGDCGGLLSCQGY 62
          +P G G +L+ GQ+W+ DV  GT GARVWART CNFD SGRG  +TGDCGG+L C+ Y
Sbjct: 18 VPVGGGVQLNPGQSWSVDVPAGTKGARVWARTGCNFDGSGRGGCQTGDCGGVLDCKAY 75

BLAST of Csa5G155430 vs. Swiss-Prot
Match: TLP1_MANZA (Thaumatin-like protein 1 OS=Manilkara zapota GN=TLP1 PE=1 SV=2)

HSP 1 Score: 82.8 bits (203), Expect = 1.4e-15
Identity = 33/55 (60.00%), Postives = 37/55 (67.27%), Query Frame = 1

Query: 7  GSGKELSSGQAWNFDVRPGTAGARVWARTNCNFDASGRGHFETGDCGGLLSCQGY 62
          G GK+L  GQ W   V PG+  AR+W RT CNFDA+G+G  +TGDC GLL CQGY
Sbjct: 20 GGGKQLDQGQTWTITVAPGSTKARIWGRTGCNFDANGQGKCQTGDCNGLLQCQGY 74

BLAST of Csa5G155430 vs. TrEMBL
Match: A0A0A0KNZ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G155430 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 9.4e-30
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 1

Query: 1  MLPLPEGSGKELSSGQAWNFDVRPGTAGARVWARTNCNFDASGRGHFETGDCGGLLSCQG 60
          MLPLPEGSGKELSSGQAWNFDVRPGTAGARVWARTNCNFDASGRGHFETGDCGGLLSCQG
Sbjct: 1  MLPLPEGSGKELSSGQAWNFDVRPGTAGARVWARTNCNFDASGRGHFETGDCGGLLSCQG 60

Query: 61 Y 62
          Y
Sbjct: 61 Y 61

BLAST of Csa5G155430 vs. TrEMBL
Match: K4DFX0_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 2.7e-16
Identity = 38/55 (69.09%), Postives = 41/55 (74.55%), Query Frame = 1

Query: 7  GSGKELSSGQAWNFDVRPGTAGARVWARTNCNFDASGRGHFETGDCGGLLSCQGY 62
          G G+ L SGQ WN +V PGT  AR+W RTNCNFD SGRG  ETGDC GLL CQGY
Sbjct: 45 GGGRRLDSGQTWNINVNPGTTQARIWGRTNCNFDGSGRGKCETGDCNGLLECQGY 99

BLAST of Csa5G155430 vs. TrEMBL
Match: Q5XUG9_SOLTU (Putative thaumatin-like protein OS=Solanum tuberosum GN=PR-5/319 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 3.5e-16
Identity = 38/55 (69.09%), Postives = 41/55 (74.55%), Query Frame = 1

Query: 7  GSGKELSSGQAWNFDVRPGTAGARVWARTNCNFDASGRGHFETGDCGGLLSCQGY 62
          G G+ L SGQ WN +V PGT  AR+W RTNCNFD SGRG  ETGDC GLL CQGY
Sbjct: 45 GGGRRLDSGQTWNLNVNPGTIQARIWGRTNCNFDGSGRGKCETGDCNGLLECQGY 99

BLAST of Csa5G155430 vs. TrEMBL
Match: A0A0A0KKB7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G155460 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 4.5e-16
Identity = 39/55 (70.91%), Postives = 42/55 (76.36%), Query Frame = 1

Query: 7  GSGKELSSGQAWNFDVRPGTAGARVWARTNCNFDASGRGHFETGDCGGLLSCQGY 62
          G G++L+    W FDV PGTA ARVWARTNCNFD SG G  ETGDCGGLL CQGY
Sbjct: 43 GGGQQLNQNDVWIFDVNPGTAAARVWARTNCNFDDSGNGGCETGDCGGLLQCQGY 97

BLAST of Csa5G155430 vs. TrEMBL
Match: L7TRX5_ACTCH (Thaumatin-like protein OS=Actinidia chinensis GN=TLP4 PE=2 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 5.9e-16
Identity = 38/55 (69.09%), Postives = 42/55 (76.36%), Query Frame = 1

Query: 7  GSGKELSSGQAWNFDVRPGTAGARVWARTNCNFDASGRGHFETGDCGGLLSCQGY 62
          G G+ L SGQ+W+  V PGT  AR+W RTNCNFDASGRG  ETGDC GLL CQGY
Sbjct: 44 GGGRRLDSGQSWSITVNPGTIQARIWGRTNCNFDASGRGKCETGDCNGLLECQGY 98

BLAST of Csa5G155430 vs. TAIR10
Match: AT4G11650.1 (AT4G11650.1 osmotin 34)

HSP 1 Score: 79.0 bits (193), Expect = 1.2e-15
Identity = 32/55 (58.18%), Postives = 37/55 (67.27%), Query Frame = 1

Query: 7  GSGKELSSGQAWNFDVRPGTAGARVWARTNCNFDASGRGHFETGDCGGLLSCQGY 62
          G G+ L +GQ+W  DV  GT  AR+W RTNCNFD+SGRG  +TGDC G L C G+
Sbjct: 42 GGGRRLDAGQSWRLDVAAGTKMARIWGRTNCNFDSSGRGRCQTGDCSGGLQCTGW 96

BLAST of Csa5G155430 vs. TAIR10
Match: AT1G19320.1 (AT1G19320.1 Pathogenesis-related thaumatin superfamily protein)

HSP 1 Score: 60.5 bits (145), Expect = 4.3e-10
Identity = 30/52 (57.69%), Postives = 31/52 (59.62%), Query Frame = 1

Query: 9   GKELSSGQAWNFDVRPGTAGARVWARTNCNFDASGRGHFETGDCGGLLSCQG 61
           G  L+SG +  F V PG +G R WART CNFDASG G   TGDCG  L C G
Sbjct: 54  GFALASGSSVTFTVSPGWSG-RFWARTYCNFDASGSGKCGTGDCGSKLKCAG 104

BLAST of Csa5G155430 vs. TAIR10
Match: AT1G75050.1 (AT1G75050.1 Pathogenesis-related thaumatin superfamily protein)

HSP 1 Score: 59.3 bits (142), Expect = 9.7e-10
Identity = 27/58 (46.55%), Postives = 32/58 (55.17%), Query Frame = 1

Query: 3   PLPEGSGKELSSGQAWNFDVRPGTAGARVWARTNCNFDASGRGHFETGDCGGLLSCQG 61
           PL  G+  +L++   W+          R WART CNFDASG G+  TGDCGG+L C G
Sbjct: 55  PLTPGASVQLTAPAGWS---------GRFWARTGCNFDASGHGNCGTGDCGGVLKCNG 103

BLAST of Csa5G155430 vs. TAIR10
Match: AT5G24620.1 (AT5G24620.1 Pathogenesis-related thaumatin superfamily protein)

HSP 1 Score: 58.2 bits (139), Expect = 2.2e-09
Identity = 30/58 (51.72%), Postives = 33/58 (56.90%), Query Frame = 1

Query: 3   PLPEGSGKELSSGQAWNFDVRPGTAGARVWARTNCNFDASGRGHFETGDCGGLLSCQG 61
           PLP  +G  L  GQ+       G +G R+WART CNFDA+G G   TGDCGG L C G
Sbjct: 49  PLPT-TGFRLDVGQSVRIPTALGWSG-RIWARTGCNFDANGAGKCMTGDCGGKLECAG 104

BLAST of Csa5G155430 vs. TAIR10
Match: AT1G75030.1 (AT1G75030.1 thaumatin-like protein 3)

HSP 1 Score: 57.8 bits (138), Expect = 2.8e-09
Identity = 27/58 (46.55%), Postives = 31/58 (53.45%), Query Frame = 1

Query: 3   PLPEGSGKELSSGQAWNFDVRPGTAGARVWARTNCNFDASGRGHFETGDCGGLLSCQG 61
           PL  G+  +L++   W+          R WART CNFDASG G   TGDCGG+L C G
Sbjct: 54  PLTPGASVQLTAPTGWS---------GRFWARTGCNFDASGHGTCVTGDCGGVLKCTG 102

BLAST of Csa5G155430 vs. NCBI nr
Match: gi|700194955|gb|KGN50132.1| (hypothetical protein Csa_5G155430 [Cucumis sativus])

HSP 1 Score: 136.7 bits (343), Expect = 1.3e-29
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 1

Query: 1  MLPLPEGSGKELSSGQAWNFDVRPGTAGARVWARTNCNFDASGRGHFETGDCGGLLSCQG 60
          MLPLPEGSGKELSSGQAWNFDVRPGTAGARVWARTNCNFDASGRGHFETGDCGGLLSCQG
Sbjct: 1  MLPLPEGSGKELSSGQAWNFDVRPGTAGARVWARTNCNFDASGRGHFETGDCGGLLSCQG 60

Query: 61 Y 62
          Y
Sbjct: 61 Y 61

BLAST of Csa5G155430 vs. NCBI nr
Match: gi|659073735|ref|XP_008437223.1| (PREDICTED: protein P21-like [Cucumis melo])

HSP 1 Score: 114.0 bits (284), Expect = 9.4e-23
Identity = 51/55 (92.73%), Postives = 51/55 (92.73%), Query Frame = 1

Query: 7  GSGKELSSGQAWNFDVRPGTAGARVWARTNCNFDASGRGHFETGDCGGLLSCQGY 62
          G GKEL SGQAWNFDVRPGTAGARVWARTN NFDASGRGH ETGDCGGLLSCQGY
Sbjct: 43 GGGKELGSGQAWNFDVRPGTAGARVWARTNFNFDASGRGHCETGDCGGLLSCQGY 97

BLAST of Csa5G155430 vs. NCBI nr
Match: gi|723751925|ref|XP_010314485.1| (PREDICTED: pathogenesis-related protein R major form [Solanum lycopersicum])

HSP 1 Score: 92.0 bits (227), Expect = 3.8e-16
Identity = 38/55 (69.09%), Postives = 41/55 (74.55%), Query Frame = 1

Query: 7  GSGKELSSGQAWNFDVRPGTAGARVWARTNCNFDASGRGHFETGDCGGLLSCQGY 62
          G G+ L SGQ WN +V PGT  AR+W RTNCNFD SGRG  ETGDC GLL CQGY
Sbjct: 45 GGGRRLDSGQTWNINVNPGTTQARIWGRTNCNFDGSGRGKCETGDCNGLLECQGY 99

BLAST of Csa5G155430 vs. NCBI nr
Match: gi|131017|sp|P07052.1|PRR2_TOBAC (RecName: Full=Pathogenesis-related protein R minor form; Short=PR-R; AltName: Full=PROB12; AltName: Full=Thaumatin-like protein E2; Flags: Precursor [Nicotiana tabacum])

HSP 1 Score: 91.7 bits (226), Expect = 5.0e-16
Identity = 36/55 (65.45%), Postives = 45/55 (81.82%), Query Frame = 1

Query: 7  GSGKELSSGQAWNFDVRPGTAGARVWARTNCNFDASGRGHFETGDCGGLLSCQGY 62
          G G++L+SGQ+W+ +V PGT  AR+W RTNCNFD SGRG+ ETGDC G+L CQGY
Sbjct: 45 GGGRQLNSGQSWSINVNPGTVQARIWGRTNCNFDGSGRGNCETGDCNGMLECQGY 99

BLAST of Csa5G155430 vs. NCBI nr
Match: gi|565397058|ref|XP_006364119.1| (PREDICTED: pathogenesis-related protein R major form [Solanum tuberosum])

HSP 1 Score: 91.7 bits (226), Expect = 5.0e-16
Identity = 38/55 (69.09%), Postives = 41/55 (74.55%), Query Frame = 1

Query: 7  GSGKELSSGQAWNFDVRPGTAGARVWARTNCNFDASGRGHFETGDCGGLLSCQGY 62
          G G+ L SGQ WN +V PGT  AR+W RTNCNFD SGRG  ETGDC GLL CQGY
Sbjct: 45 GGGRRLDSGQTWNLNVNPGTIQARIWGRTNCNFDGSGRGKCETGDCNGLLECQGY 99

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PRR2_TOBAC3.1e-1865.45Pathogenesis-related protein R minor form OS=Nicotiana tabacum PE=2 SV=1[more]
ALL13_OLEEU4.1e-1867.27Thaumatin-like protein OS=Olea europaea PE=1 SV=1[more]
PRR1_TOBAC6.9e-1865.45Pathogenesis-related protein R major form OS=Nicotiana tabacum PE=1 SV=1[more]
P21_SOYBN1.3e-1662.07Protein P21 OS=Glycine max PE=1 SV=1[more]
TLP1_MANZA1.4e-1560.00Thaumatin-like protein 1 OS=Manilkara zapota GN=TLP1 PE=1 SV=2[more]
Match NameE-valueIdentityDescription
A0A0A0KNZ4_CUCSA9.4e-30100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_5G155430 PE=4 SV=1[more]
K4DFX0_SOLLC2.7e-1669.09Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1[more]
Q5XUG9_SOLTU3.5e-1669.09Putative thaumatin-like protein OS=Solanum tuberosum GN=PR-5/319 PE=4 SV=1[more]
A0A0A0KKB7_CUCSA4.5e-1670.91Uncharacterized protein OS=Cucumis sativus GN=Csa_5G155460 PE=4 SV=1[more]
L7TRX5_ACTCH5.9e-1669.09Thaumatin-like protein OS=Actinidia chinensis GN=TLP4 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
AT4G11650.11.2e-1558.18 osmotin 34[more]
AT1G19320.14.3e-1057.69 Pathogenesis-related thaumatin superfamily protein[more]
AT1G75050.19.7e-1046.55 Pathogenesis-related thaumatin superfamily protein[more]
AT5G24620.12.2e-0951.72 Pathogenesis-related thaumatin superfamily protein[more]
AT1G75030.12.8e-0946.55 thaumatin-like protein 3[more]
Match NameE-valueIdentityDescription
gi|700194955|gb|KGN50132.1|1.3e-29100.00hypothetical protein Csa_5G155430 [Cucumis sativus][more]
gi|659073735|ref|XP_008437223.1|9.4e-2392.73PREDICTED: protein P21-like [Cucumis melo][more]
gi|723751925|ref|XP_010314485.1|3.8e-1669.09PREDICTED: pathogenesis-related protein R major form [Solanum lycopersicum][more]
gi|131017|sp|P07052.1|PRR2_TOBAC5.0e-1665.45RecName: Full=Pathogenesis-related protein R minor form; Short=PR-R; AltName: Fu... [more]
gi|565397058|ref|XP_006364119.1|5.0e-1669.09PREDICTED: pathogenesis-related protein R major form [Solanum tuberosum][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001938Thaumatin
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006952 defense response
biological_process GO:0009607 response to biotic stimulus
biological_process GO:0008150 biological_process
cellular_component GO:0005773 vacuole
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa5G155430.1Csa5G155430.1mRNA


Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001938ThaumatinPRINTSPR00347THAUMATINcoord: 8..17
score: 1.3E-14coord: 43..61
score: 1.3E-14coord: 30..41
score: 1.3
IPR001938ThaumatinGENE3DG3DSA:2.60.110.10coord: 5..60
score: 1.0
IPR001938ThaumatinPANTHERPTHR31048FAMILY NOT NAMEDcoord: 7..61
score: 2.2
IPR001938ThaumatinPFAMPF00314Thaumatincoord: 8..60
score: 1.8
IPR001938ThaumatinPROFILEPS51367THAUMATIN_2coord: 1..61
score: 1
IPR001938ThaumatinunknownSSF49870Osmotin, thaumatin-like proteincoord: 4..61
score: 3.4
NoneNo IPR availablePANTHERPTHR31048:SF36SUBFAMILY NOT NAMEDcoord: 7..61
score: 2.2

The following gene(s) are paralogous to this gene:

None