Csa5G152290 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa5G152290
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr5 : 4808160 .. 4808406 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTGAAATCGATTTTGGAGAGAAACGGCATCGTTTAGGAAGGCTGCACAATCAGATTGACGTGAGAACAGAATAAAAAAATGGTCAGCGGAACTGCGCAGGAATGGAAATGGCGGGGGAATGTAGCCGAGCGCGAGCCATTATGGAGCGCAGCGATTTCTCATGACACATTCACGATCACGACCCTTGGAACTCCCCTAGAGCCAGCCACCATCTTCTTCATCCTCCCTTTTCCCAATAATTAA

mRNA sequence

ATGGGTGAAATCGATTTTGGAGAGAAACGGCATCGTTTAGGAAGGCTGCACAATCAGATTGACGAATGGAAATGGCGGGGGAATGTAGCCGAGCGCGAGCCATTATGGAGCGCAGCGATTTCTCATGACACATTCACGATCACGACCCTTGGAACTCCCCTAGAGCCAGCCACCATCTTCTTCATCCTCCCTTTTCCCAATAATTAA

Coding sequence (CDS)

ATGGGTGAAATCGATTTTGGAGAGAAACGGCATCGTTTAGGAAGGCTGCACAATCAGATTGACGAATGGAAATGGCGGGGGAATGTAGCCGAGCGCGAGCCATTATGGAGCGCAGCGATTTCTCATGACACATTCACGATCACGACCCTTGGAACTCCCCTAGAGCCAGCCACCATCTTCTTCATCCTCCCTTTTCCCAATAATTAA

Protein sequence

MGEIDFGEKRHRLGRLHNQIDEWKWRGNVAEREPLWSAAISHDTFTITTLGTPLEPATIFFILPFPNN*
Homology
[Close]
BLAST of Csa5G152290 vs. TrEMBL
Match: A0A0A0KKH1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G152290 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 2.0e-33
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 1 

Query: 1  MGEIDFGEKRHRLGRLHNQIDEWKWRGNVAEREPLWSAAISHDTFTITTLGTPLEPATIF 60
          MGEIDFGEKRHRLGRLHNQIDEWKWRGNVAEREPLWSAAISHDTFTITTLGTPLEPATIF
Sbjct: 1  MGEIDFGEKRHRLGRLHNQIDEWKWRGNVAEREPLWSAAISHDTFTITTLGTPLEPATIF 60

Query: 61 FILPFPNN 69
          FILPFPNN
Sbjct: 61 FILPFPNN 68

[Close]
BLAST of Csa5G152290 vs. NCBI nr
Match: gi|700194886|gb|KGN50063.1| (hypothetical protein Csa_5G152290 [Cucumis sativus])

HSP 1 Score: 149.1 bits (375), Expect = 2.9e-33
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 1 

Query: 1  MGEIDFGEKRHRLGRLHNQIDEWKWRGNVAEREPLWSAAISHDTFTITTLGTPLEPATIF 60
          MGEIDFGEKRHRLGRLHNQIDEWKWRGNVAEREPLWSAAISHDTFTITTLGTPLEPATIF
Sbjct: 1  MGEIDFGEKRHRLGRLHNQIDEWKWRGNVAEREPLWSAAISHDTFTITTLGTPLEPATIF 60

Query: 61 FILPFPNN 69
          FILPFPNN
Sbjct: 61 FILPFPNN 68

The following BLAST results are available for this feature:
BLAST of Csa5G152290 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KKH1_CUCSA2.0e-33100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_5G152290 PE=4 SV=1[more]
BLAST of Csa5G152290 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700194886|gb|KGN50063.1|2.9e-33100.00hypothetical protein Csa_5G152290 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0016491 oxidoreductase activity
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU107418cucumber EST collection version 3.0transcribed_cluster
CU150386cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa5G152290.1Csa5G152290.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU107418CU107418transcribed_cluster
CU150386CU150386transcribed_cluster


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa5G152290Watermelon (97103) v1cuwmB399
Csa5G152290Watermelon (97103) v1cuwmB407
Csa5G152290Watermelon (97103) v1cuwmB408
Csa5G152290Cucurbita pepo (Zucchini)cpecuB174
Csa5G152290Cucurbita pepo (Zucchini)cpecuB432
Csa5G152290Cucurbita pepo (Zucchini)cpecuB736
Csa5G152290Bottle gourd (USVL1VR-Ls)culsiB322
Csa5G152290Bottle gourd (USVL1VR-Ls)culsiB333
Csa5G152290Bottle gourd (USVL1VR-Ls)culsiB381
Csa5G152290Cucumber (Gy14) v2cgybcuB126
Csa5G152290Cucumber (Gy14) v2cgybcuB182
Csa5G152290Cucumber (Gy14) v2cgybcuB224
Csa5G152290Cucumber (Gy14) v2cgybcuB278
Csa5G152290Melon (DHL92) v3.6.1cumedB336
Csa5G152290Melon (DHL92) v3.6.1cumedB369
Csa5G152290Melon (DHL92) v3.6.1cumedB388
Csa5G152290Melon (DHL92) v3.6.1cumedB394
Csa5G152290Silver-seed gourdcarcuB0939
Csa5G152290Silver-seed gourdcarcuB0954
Csa5G152290Watermelon (97103) v2cuwmbB336
Csa5G152290Watermelon (97103) v2cuwmbB382
Csa5G152290Watermelon (97103) v2cuwmbB388
Csa5G152290Watermelon (97103) v2cuwmbB389
Csa5G152290Wax gourdcuwgoB451
Csa5G152290Cucumber (Chinese Long) v2cucuB097
Csa5G152290Cucumber (Chinese Long) v2cucuB141
Csa5G152290Cucumber (Chinese Long) v2cucuB164
Csa5G152290Cucumber (Gy14) v1cgycuB130
Csa5G152290Cucumber (Gy14) v1cgycuB194
Csa5G152290Cucumber (Gy14) v1cgycuB434
Csa5G152290Cucurbita maxima (Rimu)cmacuB298
Csa5G152290Cucurbita maxima (Rimu)cmacuB343
Csa5G152290Cucurbita maxima (Rimu)cmacuB366
Csa5G152290Cucurbita maxima (Rimu)cmacuB608
Csa5G152290Cucurbita maxima (Rimu)cmacuB734
Csa5G152290Cucurbita moschata (Rifu)cmocuB286
Csa5G152290Cucurbita moschata (Rifu)cmocuB330
Csa5G152290Cucurbita moschata (Rifu)cmocuB598
Csa5G152290Cucurbita moschata (Rifu)cmocuB728
Csa5G152290Melon (DHL92) v3.5.1cumeB357
Csa5G152290Melon (DHL92) v3.5.1cumeB385
Csa5G152290Melon (DHL92) v3.5.1cumeB404
Csa5G152290Melon (DHL92) v3.5.1cumeB407
Csa5G152290Watermelon (Charleston Gray)cuwcgB364
Csa5G152290Watermelon (Charleston Gray)cuwcgB393
Csa5G152290Watermelon (Charleston Gray)cuwcgB399