Csa5G146920 (gene) Cucumber (Chinese Long) v2

NameCsa5G146920
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr5 : 4157160 .. 4157599 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCATTCGTATCAAATCGTCATACGAAGAAACACGAGAAGACGAAGAACACCGATTTCAACCAAATCCCATCAACATGAATTCTTTGTTCGGCTTATTCGATTCCTTTGCTGCTCAAATCTTGTTCAACAAACCAATGCTTAACAAGAACAATGGCGGAACCCATAGCTCACAATCAAGAACCGATGACGGGCAGTCCAAGACCCAGGTGCCCACTCAACAAGACAACCGCTAGAGCTCTTCCATTGAAAGCCCTTTTCCTCCGTTATGAATTCCTCATCCACTCATCTTGTTAGTTATAATTTTCATGTTATCAAGTTTTAATTCTGCCTATTTCTTTTCATCAGTTTTTGAATTTATCCATTTTTGCTATGTTTGTAATTCTTTAGTATTTTATCAAGATGAGCATTTATATTATCAATGAAGTTAGAGATTTTAATTT

mRNA sequence

ATGAATTCTTTGTTCGGCTTATTCGATTCCTTTGCTGCTCAAATCTTGTTCAACAAACCAATGCTTAACAAGAACAATGGCGGAACCCATAGCTCACAATCAAGAACCGATGACGGGCAGTCCAAGACCCAGGTGCCCACTCAACAAGACAACCGCTAG

Coding sequence (CDS)

ATGAATTCTTTGTTCGGCTTATTCGATTCCTTTGCTGCTCAAATCTTGTTCAACAAACCAATGCTTAACAAGAACAATGGCGGAACCCATAGCTCACAATCAAGAACCGATGACGGGCAGTCCAAGACCCAGGTGCCCACTCAACAAGACAACCGCTAG

Protein sequence

MNSLFGLFDSFAAQILFNKPMLNKNNGGTHSSQSRTDDGQSKTQVPTQQDNR*
BLAST of Csa5G146920 vs. TrEMBL
Match: A0A0A0KM86_CUCSA (Methyltransferase FkbM family OS=Cucumis sativus GN=Csa_5G146920 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 1.8e-21
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 1

Query: 1  MNSLFGLFDSFAAQILFNKPMLNKNNGGTHSSQSRTDDGQSKTQVPTQQDNR 53
          MNSLFGLFDSFAAQILFNKPMLNKNNGGTHSSQSRTDDGQSKTQVPTQQDNR
Sbjct: 1  MNSLFGLFDSFAAQILFNKPMLNKNNGGTHSSQSRTDDGQSKTQVPTQQDNR 52

BLAST of Csa5G146920 vs. NCBI nr
Match: gi|700194792|gb|KGN49969.1| (Methyltransferase FkbM family [Cucumis sativus])

HSP 1 Score: 109.0 bits (271), Expect = 2.6e-21
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 1

Query: 1  MNSLFGLFDSFAAQILFNKPMLNKNNGGTHSSQSRTDDGQSKTQVPTQQDNR 53
          MNSLFGLFDSFAAQILFNKPMLNKNNGGTHSSQSRTDDGQSKTQVPTQQDNR
Sbjct: 1  MNSLFGLFDSFAAQILFNKPMLNKNNGGTHSSQSRTDDGQSKTQVPTQQDNR 52

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KM86_CUCSA1.8e-21100.00Methyltransferase FkbM family OS=Cucumis sativus GN=Csa_5G146920 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700194792|gb|KGN49969.1|2.6e-21100.00Methyltransferase FkbM family [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0032259 methylation
cellular_component GO:0005575 cellular_component
molecular_function GO:0008168 methyltransferase activity
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU114428cucumber EST collection version 3.0transcribed_cluster
CU176313cucumber EST collection version 3.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa5G146920.1Csa5G146920.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU114428CU114428transcribed_cluster
CU176313CU176313transcribed_cluster


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa5G146920CSPI05G04150Wild cucumber (PI 183967)cpicuB240
The following gene(s) are paralogous to this gene:

None