Csa5G139700 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa5G139700
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Proline-rich cell wall protein-like; contains IPR009060 (UBA-like)
Location	Chr5 : 3692313 .. 3694912 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTGAAACATATTTGGTTTGACAATCGTCCACCGTCTTTCCCTTGAGCCTTTTCCTCTGTTCTCCAATGGCGTACGATTTCAGAAACAACTCCGGCCACTACGATTCTCATCAGCCGATGTACACCTCAACCGCTTCTTCTTCCCCATCTCCTTCTCCCCATCCCATGTATTCACATTCAATGTACCCCAGAATCGGTCAACAAGCTCCTTCATCAACCCCTCCGGTGGCCCGTCTCTCATCCCATCATTATTCTTCTTCTCCATCCCCATCACCTTCTTCTTCGTGTAAATTCATCGGTTTCCATCTTATTTTATAATGGGGTTTTGACGAATCGCTTTGTTTTGTAGTTTATGTGAATTTCAGAAATGATTTTAGGGTTTTCTTGGATCATTTGATTTTCCCATGAAATTGATGGAATTTTTTTTATTGTACAGCAGGATTGGGCATCAGGGTTACTATTAAACCGGAATATCGAATTACTCCTCCGGTGCGTTTTGATTTTGTTGCTCTAGATTGTGGATTCTGTTTTGAATGTGAATTGGATCTTGATATTGGTGACTTTCCGTTTGGTTCTATGGTTGTTTTGGGTTTTAATGGCTTGACGTTTTCTTATAGCCTCAATTATCTCCACAAGTTGGAGATATTCCTCGGAGCAATTTCCAATTTGATTTTGAGTTTGAGAAAAAGGTTTTAGCTGAAGCAGAGAAAGAAGCTCCAAATTGGAATCGGTTTGGGTTGGAACATCCTCCTCCTAAACCAGTGGAGTCCACATCTTCAATGGTAACTCTTTCTTTTTAATTCGTATGCTCTTTTTTTCTTCATCAGCGAGCTTCTTAACTAAGACTTTATCTATGAAAGATTCTCCCTGTAAACATATTTGTAATTTTTAATCTGTAGTAGGTTATTTCCTCATCGTTGGCATCATTAATCACATTTATATTGCATTAGAAATTTTATTGTTTATGATCTGCAAACTAAAGGTCTTTGTTTCTTGTTATTTATTTATTCATTCATTTTGTGTTGACTATCTCTTGAAAAACAAAAAAACTACTTGATTATATTTGATTTCGCTTTTTTCACTTTTCAAAATAGAACTATATGGTATGTCTCACAGTCAATGTTCCACAATCTATATTTGTATGTGTAAACACATGTTTCCTTGTAGGGTTCAATTGGAGATCCAGTTGTGAGCAAGTATGTTGCATCTGGCTTGAATCGGGAAGCTGTTTCATTTGCAGTTGCTAACTATGGAGACAATCCAACCAAGGTAATTATGAATTATTGGTGCAGTGACACCCTAGGGAAATGGGATATGATCTCATTGTAATGTATAGTATTTGTGGCATTTGATATATATACTTGATAAACTTCCATGATTGACCCAATGATCAATAAGAGGCAATAATGTAAACAGTGAAGTGCTTAAAGGAGGAGTTGGATTTAACCATAGTGGTCACCTACTTAGGATTTAATATCTTATTATGAGTTTTATTGCCATCTAAGTATAGAGAGTTAGATAATATTCCCATGAGAATAATTGAGACATGTATATATAGCCCATTTATACAACATGGTGAAGTGGTCCTCTTGAAAGAGAGAGTGGGTGCCTTTGGGAATGTGGACACAGTGGTGCATGATTGTTGTCACTTGTCACCTAGTGGTATAAGGTATTAACAATGCTAAGTTGAAGGAAGATCAAGTATTATCAGTGATTAGTCGGAGGAAAGTCAGGATTATATCTGTTAAGTTGTAGGAAGGTCTGGACGACTATAATCATTATCTAGAGATGTTGAGTTATCATGCCCTTTCACCTTAGGACACGTGCTATAATGGCCAGAACAAAAATATGTGTGCTTCATATGATTTATTACATATTAGATAATGTGTGTAAACAACTTGCTGGATTATCTCTACTTCTCACTCTACTATAAATATATTTAAGTTGCTTGCTTGTAATGCAAGATGCAGGATCCATGCACAGCTCTTTGATTTATCTTATCATTTACGCTATTTGATTCAATTCTACTTAACCTTCAAAGAGGTTAAAATGTAGCTTTGTTCTCTAAAGTCTACTTTCTTTCTTAATCTGGTTATTAAGTTCAAAACGCCCTATTTAGTGAGTTCGAATAACTTTCAGTCTTAGTCTCTCTAATTCCATCTTGTGAAGCACTTCATTCTACGATGTCCTTCATGTTTATTTTTTGTGTTTTTGTTTGGCTTTGCTGACAGTCTCTGAGTAACTTTGTAGGTTCAAGAATTTGTAAAAGGCTACACACTCCTACGAGAAATGGGATTTTCTTCTATCAAGGTGGTTGAGGCATTACTCATGTATGACAATGACACCGATAAGGCTGTAGCTCATTTTCTTGGTGGTACGTCTTAATTGAAAATTATGAAAATGATTGTGTCAAGAGTTCTGTTGTACTTCAACTATGACATCTTTGTATATGTAATATGACTATATAGAGGCCTCTTGGGATTGTAAATGTTATAAATAATATAGGCATAGGCATTTGTTGTGTATTGTAGTCGTTTACCTATTGGTGTTTGGCCAACACTTGCAGATCCTCTTAATGACAGCTGATGATGATTACATC

mRNA sequence

ATGGCGTACGATTTCAGAAACAACTCCGGCCACTACGATTCTCATCAGCCGATGTACACCTCAACCGCTTCTTCTTCCCCATCTCCTTCTCCCCATCCCATGTATTCACATTCAATGTACCCCAGAATCGGTCAACAAGCTCCTTCATCAACCCCTCCGGTGGCCCGTCTCTCATCCCATCATTATTCTTCTTCTCCATCCCCATCACCTTCTTCTTCGTCAGGATTGGGCATCAGGGTTACTATTAAACCGGAATATCGAATTACTCCTCCGCCTCAATTATCTCCACAAGTTGGAGATATTCCTCGGAGCAATTTCCAATTTGATTTTGAGTTTGAGAAAAAGGTTTTAGCTGAAGCAGAGAAAGAAGCTCCAAATTGGAATCGGTTTGGGTTGGAACATCCTCCTCCTAAACCAGTGGAGTCCACATCTTCAATGGGTTCAATTGGAGATCCAGTTGTGAGCAAGTATGTTGCATCTGGCTTGAATCGGGAAGCTGTTTCATTTGCAGTTGCTAACTATGGAGACAATCCAACCAAGGTTCAAGAATTTGTAAAAGGCTACACACTCCTACGAGAAATGGGATTTTCTTCTATCAAGGTGGTTGAGGCATTACTCATGTATGACAATGACACCGATAAGGCTGTAGCTCATTTTCTTGGTGGTACGTCTTAA

Coding sequence (CDS)

ATGGCGTACGATTTCAGAAACAACTCCGGCCACTACGATTCTCATCAGCCGATGTACACCTCAACCGCTTCTTCTTCCCCATCTCCTTCTCCCCATCCCATGTATTCACATTCAATGTACCCCAGAATCGGTCAACAAGCTCCTTCATCAACCCCTCCGGTGGCCCGTCTCTCATCCCATCATTATTCTTCTTCTCCATCCCCATCACCTTCTTCTTCGTCAGGATTGGGCATCAGGGTTACTATTAAACCGGAATATCGAATTACTCCTCCGCCTCAATTATCTCCACAAGTTGGAGATATTCCTCGGAGCAATTTCCAATTTGATTTTGAGTTTGAGAAAAAGGTTTTAGCTGAAGCAGAGAAAGAAGCTCCAAATTGGAATCGGTTTGGGTTGGAACATCCTCCTCCTAAACCAGTGGAGTCCACATCTTCAATGGGTTCAATTGGAGATCCAGTTGTGAGCAAGTATGTTGCATCTGGCTTGAATCGGGAAGCTGTTTCATTTGCAGTTGCTAACTATGGAGACAATCCAACCAAGGTTCAAGAATTTGTAAAAGGCTACACACTCCTACGAGAAATGGGATTTTCTTCTATCAAGGTGGTTGAGGCATTACTCATGTATGACAATGACACCGATAAGGCTGTAGCTCATTTTCTTGGTGGTACGTCTTAA

Protein sequence

MAYDFRNNSGHYDSHQPMYTSTASSSPSPSPHPMYSHSMYPRIGQQAPSSTPPVARLSSHHYSSSPSPSPSSSSGLGIRVTIKPEYRITPPPQLSPQVGDIPRSNFQFDFEFEKKVLAEAEKEAPNWNRFGLEHPPPKPVESTSSMGSIGDPVVSKYVASGLNREAVSFAVANYGDNPTKVQEFVKGYTLLREMGFSSIKVVEALLMYDNDTDKAVAHFLGGTS*

Homology

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BLAST of Csa5G139700 vs. TrEMBL
Match: A0A0A0KNB8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G139700 PE=4 SV=1)

HSP 1 Score: 459.9 bits (1182), Expect = 1.8e-126
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 1


Query: 1   MAYDFRNNSGHYDSHQPMYTSTASSSPSPSPHPMYSHSMYPRIGQQAPSSTPPVARLSSH 60
           MAYDFRNNSGHYDSHQPMYTSTASSSPSPSPHPMYSHSMYPRIGQQAPSSTPPVARLSSH
Sbjct: 1   MAYDFRNNSGHYDSHQPMYTSTASSSPSPSPHPMYSHSMYPRIGQQAPSSTPPVARLSSH 60

Query: 61  HYSSSPSPSPSSSSGLGIRVTIKPEYRITPPPQLSPQVGDIPRSNFQFDFEFEKKVLAEA 120
           HYSSSPSPSPSSSSGLGIRVTIKPEYRITPPPQLSPQVGDIPRSNFQFDFEFEKKVLAEA
Sbjct: 61  HYSSSPSPSPSSSSGLGIRVTIKPEYRITPPPQLSPQVGDIPRSNFQFDFEFEKKVLAEA 120

Query: 121 EKEAPNWNRFGLEHPPPKPVESTSSMGSIGDPVVSKYVASGLNREAVSFAVANYGDNPTK 180
           EKEAPNWNRFGLEHPPPKPVESTSSMGSIGDPVVSKYVASGLNREAVSFAVANYGDNPTK
Sbjct: 121 EKEAPNWNRFGLEHPPPKPVESTSSMGSIGDPVVSKYVASGLNREAVSFAVANYGDNPTK 180

Query: 181 VQEFVKGYTLLREMGFSSIKVVEALLMYDNDTDKAVAHFLGGTS 225
           VQEFVKGYTLLREMGFSSIKVVEALLMYDNDTDKAVAHFLGGTS
Sbjct: 181 VQEFVKGYTLLREMGFSSIKVVEALLMYDNDTDKAVAHFLGGTS 224

[Close]

BLAST of Csa5G139700 vs. TrEMBL
Match: B9RIN5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1581330 PE=4 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 2.1e-79
Identity = 153/227 (67.40%), Postives = 181/227 (79.74%), Query Frame = 1


Query: 1   MAYDFRNNS--GHYDSHQPMYTSTASSSPSPSPHPMYSHSMYPRIGQQ-APSSTPPVARL 60
           M YDFRN +    YDS  PMY +T+SS+PS   HPMY  S+YPRIGQQ   +  PPV R 
Sbjct: 1   MDYDFRNRTTGSSYDSQTPMYRTTSSSTPSG--HPMYGQSLYPRIGQQQGHTPVPPVGRH 60

Query: 61  SSHHYSSSPSPSPSSSSGLGIRVTIKPEYRITPPPQLSPQVGDIPRSNFQFDFEFEKKVL 120
           SS+H SS+P PS   SSGLGIRV++KPEYRITPPPQL+PQ+GDIPRSNFQF F+ E+++L
Sbjct: 61  SSYHQSSAPPPS---SSGLGIRVSVKPEYRITPPPQLAPQMGDIPRSNFQFHFDLERRIL 120

Query: 121 AEAEKEAPNWNRFGLEHPPPKPVESTSSMGSIGDPVVSKYVASGLNREAVSFAVANYGDN 180
           AEAEK+  NW++ GLE+ P K  ESTSS+GS  DPVVSKY+ASGLNREAV  AVANYGDN
Sbjct: 121 AEAEKDIQNWSKLGLENLPSKTTESTSSLGSAADPVVSKYIASGLNREAVPLAVANYGDN 180

Query: 181 PTKVQEFVKGYTLLREMGFSSIKVVEALLMYDNDTDKAVAHFLGGTS 225
           PTKV+EFV G++LLREMGFS+  V EALLMYDNDTDKA+ HFL  +S
Sbjct: 181 PTKVREFVNGFSLLREMGFSANNVAEALLMYDNDTDKALTHFLNSSS 222

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BLAST of Csa5G139700 vs. TrEMBL
Match: A0A0B0P5B7_GOSAR (Ubiquitin-associated 1 OS=Gossypium arboreum GN=F383_24950 PE=4 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 8.9e-78
Identity = 156/227 (68.72%), Postives = 178/227 (78.41%), Query Frame = 1


Query: 1   MAYDFRNNSGH-YDSHQPMYTSTASSSPSPSPHPMYSHSMYPRIGQQ--APSSTPPVARL 60
           M YDFRN +G  Y++  P+Y    +SS S   HPMY  SMYPRIG Q  A S  PP  R 
Sbjct: 1   MDYDFRNRTGPPYEAQIPIYRQQPTSSSST--HPMYGSSMYPRIGGQPAAHSVAPPTTRA 60

Query: 61  SSHHYSSSPSPSPSSSSGLGIRVTIKPEYRITPPPQLSPQVGDIPRSNFQFDFEFEKKVL 120
           SS H +S    SPSSSSGLGIRV +KPEYRITPPPQLSPQVGDIPRSNFQFDFEFE+K+L
Sbjct: 61  SSFHQNS----SPSSSSGLGIRVALKPEYRITPPPQLSPQVGDIPRSNFQFDFEFERKIL 120

Query: 121 AEAEKEAPNWNRFGLEHPPPKPVESTSSMGSIGDPVVSKYVASGLNREAVSFAVANYGDN 180
           AEAEKE  NW++ GLE+   KP+E++SS G+  DPVVSKY+ASGL+REAV+ AVANYGDN
Sbjct: 121 AEAEKENMNWSKLGLENLSSKPIETSSSTGANSDPVVSKYIASGLSREAVTVAVANYGDN 180

Query: 181 PTKVQEFVKGYTLLREMGFSSIKVVEALLMYDNDTDKAVAHFLGGTS 225
           PTKV+EFV GY LLREMGFSS  V EALLMYDNDTDKA+AHFL  +S
Sbjct: 181 PTKVREFVTGYNLLREMGFSSNNVAEALLMYDNDTDKALAHFLNSSS 221

[Close]

BLAST of Csa5G139700 vs. TrEMBL
Match: A0A061G0Q1_THECC (Ubiquitin-associated/translation elongation factor EF1B protein OS=Theobroma cacao GN=TCM_015327 PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 2.8e-76
Identity = 154/229 (67.25%), Postives = 178/229 (77.73%), Query Frame = 1


Query: 1   MAYDFRNNSGH-YDSHQPMY----TSTASSSPSPSPHPMYSHSMYPRIGQQAPSSTPPVA 60
           M YDFRN +G  Y++  PMY    TS++SSS  PS HPMY  S+YPRIGQ A +  PP  
Sbjct: 1   MDYDFRNRTGPPYEAQIPMYRQQPTSSSSSSSMPSSHPMYGPSLYPRIGQPAHTVVPPAP 60

Query: 61  RLSSHHYSSSPSPSPSSSSGLGIRVTIKPEYRITPPPQLSPQVGDIPRSNFQFDFEFEKK 120
           R+ S H++SSPS    SSSGLG+RV +KPEYRITPPPQL PQVGDIPRSNFQFDF FE+K
Sbjct: 61  RIPSFHHTSSPS----SSSGLGVRVALKPEYRITPPPQLLPQVGDIPRSNFQFDFGFERK 120

Query: 121 VLAEAEKEAPNWNRFGLEHPPPKPVESTSSMGSIGDPVVSKYVASGLNREAVSFAVANYG 180
           +LAEAE E+ N++R GLE    K  ESTSS G+  DPVVSKY+ASGLNREAV+ AVANYG
Sbjct: 121 ILAEAENESMNFSRLGLESLS-KSTESTSSSGANADPVVSKYIASGLNREAVTVAVANYG 180

Query: 181 DNPTKVQEFVKGYTLLREMGFSSIKVVEALLMYDNDTDKAVAHFLGGTS 225
           DNPTKV+EFV  Y LLREMGFSS  V EALLMY+NDTDKA+AHFL  +S
Sbjct: 181 DNPTKVREFVHSYNLLREMGFSSNNVAEALLMYENDTDKALAHFLNNSS 224

[Close]

BLAST of Csa5G139700 vs. TrEMBL
Match: A0A0D2P188_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G014400 PE=4 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 1.1e-75
Identity = 155/228 (67.98%), Postives = 177/228 (77.63%), Query Frame = 1


Query: 1   MAYDFRNNSGH-YDSHQPMYTSTASSSPSPSPHPMYSHSMYPRIGQQ--APSSTPPVARL 60
           M YDFRN +G  Y++  P+Y    +SS S   HPMY  SMYPRIG Q  A S  PP  R 
Sbjct: 1   MDYDFRNRTGPPYEAQIPIYRQQPTSSSST--HPMYGSSMYPRIGGQPAAHSVAPPTTRA 60

Query: 61  SSHHYSSSPSPSPSSSSGLGIRVTIKPEYRITPPPQLSPQVGDIPRSNFQFDFEFEKKVL 120
           SS H + SPS    SSSGLGIRV +KP+YRITPPPQLSPQVGDIPRSNFQFDFEFE+K+L
Sbjct: 61  SSFHQNFSPS----SSSGLGIRVALKPKYRITPPPQLSPQVGDIPRSNFQFDFEFERKIL 120

Query: 121 AEAEKEAPNWNRFGLEHPPPKPVE-STSSMGSIGDPVVSKYVASGLNREAVSFAVANYGD 180
           AEAEKE  NW++ GLE+   KP+E S+SS G+  DPVVSKY+ASGL+REAV+ AVANYGD
Sbjct: 121 AEAEKENMNWSKLGLENLSSKPIETSSSSTGANSDPVVSKYIASGLSREAVTLAVANYGD 180

Query: 181 NPTKVQEFVKGYTLLREMGFSSIKVVEALLMYDNDTDKAVAHFLGGTS 225
           NPTKV+EFV GY LLREMGFSS  V EALLMYDNDTDKA+AHFL  +S
Sbjct: 181 NPTKVREFVTGYNLLREMGFSSNNVAEALLMYDNDTDKALAHFLNSSS 222

[Close]

BLAST of Csa5G139700 vs. TAIR10
Match: AT5G53330.1 (AT5G53330.1 Ubiquitin-associated/translation elongation factor EF1B protein)

HSP 1 Score: 245.0 bits (624), Expect = 4.5e-65
Identity = 137/231 (59.31%), Postives = 163/231 (70.56%), Query Frame = 1


Query: 1   MAYDFRNNSGHYDSHQPMYTSTASSSPSPSP-HPMYSHSMYPRIGQQA---PSSTPPVAR 60
           M YD+RN SG     +PMY    S+SPSPS  HPMY    YP+IGQQ    P    P  R
Sbjct: 1   MDYDYRNKSGGPSYPRPMY-GPPSTSPSPSSNHPMYG---YPKIGQQTGPGPQFFSPPER 60

Query: 61  LSSHHYSSSPSPSPSSSSGLGIRVTIKPEYRITPPPQLSPQVGDIPRSNFQFDFEFEKKV 120
            SS  +++SPS      SG+GIRV +KPEYRITPPPQL P+VGDI RS+FQFDF  E+KV
Sbjct: 61  NSSFQHNTSPS------SGIGIRVNLKPEYRITPPPQLLPRVGDIHRSSFQFDFGLERKV 120

Query: 121 LAEAEKEAPNWNRFGLEHPPPKPVE-STSSMGSIG--DPVVSKYVASGLNREAVSFAVAN 180
           LAEAEK+ P+W++FG E+PP K  E S SS+G +   D VV KY ASGLNREAV+ AVAN
Sbjct: 121 LAEAEKDNPDWSKFGSENPPAKFHEPSPSSVGQMQGVDHVVMKYTASGLNREAVNIAVAN 180

Query: 181 YGDNPTKVQEFVKGYTLLREMGFSSIKVVEALLMYDNDTDKAVAHFLGGTS 225
           YGDNPTKVQEF  G+T +REMGF +  V +AL M++NDTDKA+AH L G+S
Sbjct: 181 YGDNPTKVQEFANGFTAIREMGFPTNAVADALFMFENDTDKALAHLLHGSS 221

[Close]

BLAST of Csa5G139700 vs. NCBI nr
Match: gi|449456359|ref|XP_004145917.1| (PREDICTED: uncharacterized protein LOC101219735 isoform X1 [Cucumis sativus])

HSP 1 Score: 459.9 bits (1182), Expect = 2.5e-126
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 1


Query: 1   MAYDFRNNSGHYDSHQPMYTSTASSSPSPSPHPMYSHSMYPRIGQQAPSSTPPVARLSSH 60
           MAYDFRNNSGHYDSHQPMYTSTASSSPSPSPHPMYSHSMYPRIGQQAPSSTPPVARLSSH
Sbjct: 1   MAYDFRNNSGHYDSHQPMYTSTASSSPSPSPHPMYSHSMYPRIGQQAPSSTPPVARLSSH 60

Query: 61  HYSSSPSPSPSSSSGLGIRVTIKPEYRITPPPQLSPQVGDIPRSNFQFDFEFEKKVLAEA 120
           HYSSSPSPSPSSSSGLGIRVTIKPEYRITPPPQLSPQVGDIPRSNFQFDFEFEKKVLAEA
Sbjct: 61  HYSSSPSPSPSSSSGLGIRVTIKPEYRITPPPQLSPQVGDIPRSNFQFDFEFEKKVLAEA 120

Query: 121 EKEAPNWNRFGLEHPPPKPVESTSSMGSIGDPVVSKYVASGLNREAVSFAVANYGDNPTK 180
           EKEAPNWNRFGLEHPPPKPVESTSSMGSIGDPVVSKYVASGLNREAVSFAVANYGDNPTK
Sbjct: 121 EKEAPNWNRFGLEHPPPKPVESTSSMGSIGDPVVSKYVASGLNREAVSFAVANYGDNPTK 180

Query: 181 VQEFVKGYTLLREMGFSSIKVVEALLMYDNDTDKAVAHFLGGTS 225
           VQEFVKGYTLLREMGFSSIKVVEALLMYDNDTDKAVAHFLGGTS
Sbjct: 181 VQEFVKGYTLLREMGFSSIKVVEALLMYDNDTDKAVAHFLGGTS 224

[Close]

BLAST of Csa5G139700 vs. NCBI nr
Match: gi|778698968|ref|XP_011654631.1| (PREDICTED: uncharacterized protein LOC101219735 isoform X2 [Cucumis sativus])

HSP 1 Score: 454.1 bits (1167), Expect = 1.4e-124
Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 1


Query: 1   MAYDFRNNSGHYDSHQPMYTSTASSSPSPSPHPMYSHSMYPRIGQQAPSSTPPVARLSSH 60
           MAYDFRNNSGHYDSHQPMYTSTASSSPSPSPHPMYSHSMYPRIGQQAPSSTPPVARLSSH
Sbjct: 1   MAYDFRNNSGHYDSHQPMYTSTASSSPSPSPHPMYSHSMYPRIGQQAPSSTPPVARLSSH 60

Query: 61  HYSSSPSPSPSSSSGLGIRVTIKPEYRITPPPQLSPQVGDIPRSNFQFDFEFEKKVLAEA 120
           HYSSSPSPSPSSSSGLGIRVTIKPEYRITPPPQLSPQVGDIPRSNFQFDFEFEKKVLAEA
Sbjct: 61  HYSSSPSPSPSSSSGLGIRVTIKPEYRITPPPQLSPQVGDIPRSNFQFDFEFEKKVLAEA 120

Query: 121 EKEAPNWNRFGLEHPPPKPVESTSSMGSIGDPVVSKYVASGLNREAVSFAVANYGDNPTK 180
           EKEAPNWNRFGLEHPPPKPVESTSSMGSIGDPVVSKYVASGLNREAVSFAVANYGDNPTK
Sbjct: 121 EKEAPNWNRFGLEHPPPKPVESTSSMGSIGDPVVSKYVASGLNREAVSFAVANYGDNPTK 180

Query: 181 VQEFVKGYTLLREMGFSSIKVVEALLMYDNDTDKAVAHFLG 222
           VQEFVKGYTLLREMGFSSIKVVEALLMYDNDTDKAVAHFLG
Sbjct: 181 VQEFVKGYTLLREMGFSSIKVVEALLMYDNDTDKAVAHFLG 221

[Close]

BLAST of Csa5G139700 vs. NCBI nr
Match: gi|659074360|ref|XP_008437562.1| (PREDICTED: uncharacterized protein LOC103482940 isoform X1 [Cucumis melo])

HSP 1 Score: 431.8 bits (1109), Expect = 7.4e-118
Identity = 214/224 (95.54%), Postives = 216/224 (96.43%), Query Frame = 1


Query: 1   MAYDFRNNSGHYDSHQPMYTSTASSSPSPSPHPMYSHSMYPRIGQQAPSSTPPVARLSSH 60
           MAYDFRNNSGHYDSH PMY STASS+PSPSPHPMYS SMYPRIGQQAPSSTPPVARLSSH
Sbjct: 1   MAYDFRNNSGHYDSH-PMYASTASSTPSPSPHPMYSQSMYPRIGQQAPSSTPPVARLSSH 60

Query: 61  HYSSSPSPSPSSSSGLGIRVTIKPEYRITPPPQLSPQVGDIPRSNFQFDFEFEKKVLAEA 120
           H+SSSPS SPSSSSGLGIRVTIKPEYRITPPPQLSPQVGDIPRSNF FDFEFEKKVLAEA
Sbjct: 61  HHSSSPSSSPSSSSGLGIRVTIKPEYRITPPPQLSPQVGDIPRSNFHFDFEFEKKVLAEA 120

Query: 121 EKEAPNWNRFGLEHPPPKPVESTSSMGSIGDPVVSKYVASGLNREAVSFAVANYGDNPTK 180
           EKEAPNWNRFGLE  PPKPVESTSSMGSIGDP VSKYVASGLNREAVSFAVANYGDNPTK
Sbjct: 121 EKEAPNWNRFGLEQLPPKPVESTSSMGSIGDPTVSKYVASGLNREAVSFAVANYGDNPTK 180

Query: 181 VQEFVKGYTLLREMGFSSIKVVEALLMYDNDTDKAVAHFLGGTS 225
           VQEFVKGYTLLREMGFSSIKVVEALLMYDNDTDKAVAHFLGGTS
Sbjct: 181 VQEFVKGYTLLREMGFSSIKVVEALLMYDNDTDKAVAHFLGGTS 223

[Close]

BLAST of Csa5G139700 vs. NCBI nr
Match: gi|659074362|ref|XP_008437563.1| (PREDICTED: uncharacterized protein LOC103482940 isoform X2 [Cucumis melo])

HSP 1 Score: 426.0 bits (1094), Expect = 4.0e-116
Identity = 211/221 (95.48%), Postives = 213/221 (96.38%), Query Frame = 1


Query: 1   MAYDFRNNSGHYDSHQPMYTSTASSSPSPSPHPMYSHSMYPRIGQQAPSSTPPVARLSSH 60
           MAYDFRNNSGHYDSH PMY STASS+PSPSPHPMYS SMYPRIGQQAPSSTPPVARLSSH
Sbjct: 1   MAYDFRNNSGHYDSH-PMYASTASSTPSPSPHPMYSQSMYPRIGQQAPSSTPPVARLSSH 60

Query: 61  HYSSSPSPSPSSSSGLGIRVTIKPEYRITPPPQLSPQVGDIPRSNFQFDFEFEKKVLAEA 120
           H+SSSPS SPSSSSGLGIRVTIKPEYRITPPPQLSPQVGDIPRSNF FDFEFEKKVLAEA
Sbjct: 61  HHSSSPSSSPSSSSGLGIRVTIKPEYRITPPPQLSPQVGDIPRSNFHFDFEFEKKVLAEA 120

Query: 121 EKEAPNWNRFGLEHPPPKPVESTSSMGSIGDPVVSKYVASGLNREAVSFAVANYGDNPTK 180
           EKEAPNWNRFGLE  PPKPVESTSSMGSIGDP VSKYVASGLNREAVSFAVANYGDNPTK
Sbjct: 121 EKEAPNWNRFGLEQLPPKPVESTSSMGSIGDPTVSKYVASGLNREAVSFAVANYGDNPTK 180

Query: 181 VQEFVKGYTLLREMGFSSIKVVEALLMYDNDTDKAVAHFLG 222
           VQEFVKGYTLLREMGFSSIKVVEALLMYDNDTDKAVAHFLG
Sbjct: 181 VQEFVKGYTLLREMGFSSIKVVEALLMYDNDTDKAVAHFLG 220

[Close]

BLAST of Csa5G139700 vs. NCBI nr
Match: gi|659074364|ref|XP_008437564.1| (PREDICTED: uncharacterized protein LOC103482940 isoform X3 [Cucumis melo])

HSP 1 Score: 422.9 bits (1086), Expect = 3.4e-115
Identity = 212/224 (94.64%), Postives = 214/224 (95.54%), Query Frame = 1


Query: 1   MAYDFRNNSGHYDSHQPMYTSTASSSPSPSPHPMYSHSMYPRIGQQAPSSTPPVARLSSH 60
           MAYDFRNNSGHYDSH PMY STASS+PSPSPHPMYS SMYPRIGQQAPSSTPPVARLSSH
Sbjct: 1   MAYDFRNNSGHYDSH-PMYASTASSTPSPSPHPMYSQSMYPRIGQQAPSSTPPVARLSSH 60

Query: 61  HYSSSPSPSPSSSSGLGIRVTIKPEYRITPPPQLSPQVGDIPRSNFQFDFEFEKKVLAEA 120
           H+SSSPS SPSSS  LGIRVTIKPEYRITPPPQLSPQVGDIPRSNF FDFEFEKKVLAEA
Sbjct: 61  HHSSSPSSSPSSSC-LGIRVTIKPEYRITPPPQLSPQVGDIPRSNFHFDFEFEKKVLAEA 120

Query: 121 EKEAPNWNRFGLEHPPPKPVESTSSMGSIGDPVVSKYVASGLNREAVSFAVANYGDNPTK 180
           EKEAPNWNRFGLE  PPKPVESTSSMGSIGDP VSKYVASGLNREAVSFAVANYGDNPTK
Sbjct: 121 EKEAPNWNRFGLEQLPPKPVESTSSMGSIGDPTVSKYVASGLNREAVSFAVANYGDNPTK 180

Query: 181 VQEFVKGYTLLREMGFSSIKVVEALLMYDNDTDKAVAHFLGGTS 225
           VQEFVKGYTLLREMGFSSIKVVEALLMYDNDTDKAVAHFLGGTS
Sbjct: 181 VQEFVKGYTLLREMGFSSIKVVEALLMYDNDTDKAVAHFLGGTS 222

The following BLAST results are available for this feature:

BLAST of Csa5G139700 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KNB8_CUCSA	1.8e-126	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G139700 PE=4 SV=1	[more]
B9RIN5_RICCO	2.1e-79	67.40	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1581330 PE=4 SV=1	[more]
A0A0B0P5B7_GOSAR	8.9e-78	68.72	Ubiquitin-associated 1 OS=Gossypium arboreum GN=F383_24950 PE=4 SV=1	[more]
A0A061G0Q1_THECC	2.8e-76	67.25	Ubiquitin-associated/translation elongation factor EF1B protein OS=Theobroma cac...	[more]
A0A0D2P188_GOSRA	1.1e-75	67.98	Uncharacterized protein OS=Gossypium raimondii GN=B456_007G014400 PE=4 SV=1	[more]

BLAST of Csa5G139700 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G53330.1	4.5e-65	59.31	Ubiquitin-associated/translation elongation factor EF1B protein	[more]

BLAST of Csa5G139700 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449456359\|ref\|XP_004145917.1\|	2.5e-126	100.00	PREDICTED: uncharacterized protein LOC101219735 isoform X1 [Cucumis sativus]	[more]
gi\|778698968\|ref\|XP_011654631.1\|	1.4e-124	100.00	PREDICTED: uncharacterized protein LOC101219735 isoform X2 [Cucumis sativus]	[more]
gi\|659074360\|ref\|XP_008437562.1\|	7.4e-118	95.54	PREDICTED: uncharacterized protein LOC103482940 isoform X1 [Cucumis melo]	[more]
gi\|659074362\|ref\|XP_008437563.1\|	4.0e-116	95.48	PREDICTED: uncharacterized protein LOC103482940 isoform X2 [Cucumis melo]	[more]
gi\|659074364\|ref\|XP_008437564.1\|	3.4e-115	94.64	PREDICTED: uncharacterized protein LOC103482940 isoform X3 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR009060	UBA-like_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0043162	ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0000813	ESCRT I complex
molecular_function	GO:0005515	protein binding
molecular_function	GO:0043130	ubiquitin binding

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU101246	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa5G139700.1	Csa5G139700.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU101246	CU101246	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009060	UBA-like	unknown	SSF46934	UBA-like	coord: 166..220 score: 8.9
None	No IPR available	PANTHER	PTHR15960	FAMILY NOT NAMED	coord: 3..224 score: 6.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa5G139700	Cla004917	Watermelon (97103) v1	cuwmB408
Csa5G139700	MELO3C005862	Melon (DHL92) v3.5.1	cumeB357
Csa5G139700	ClCG01G000680	Watermelon (Charleston Gray)	cuwcgB364
Csa5G139700	Lsi09G000490	Bottle gourd (USVL1VR-Ls)	culsiB322
Csa5G139700	MELO3C005862.2	Melon (DHL92) v3.6.1	cumedB336
Csa5G139700	Cla97C01G000740	Watermelon (97103) v2	cuwmbB336
Csa5G139700	Bhi12G000532	Wax gourd	cuwgoB453
Csa5G139700	CSPI05G03430	Wild cucumber (PI 183967)	cpicuB240
Csa5G139700	Cucsa.201900	Cucumber (Gy14) v1	cgycuB309
Csa5G139700	CsGy5G000670	Cucumber (Gy14) v2	cgybcuB224

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa5G139700	Melon (DHL92) v3.6.1	cumedB386
Csa5G139700	Melon (DHL92) v3.6.1	cumedB392
Csa5G139700	Melon (DHL92) v3.6.1	cumedB395
Csa5G139700	Silver-seed gourd	carcuB0327
Csa5G139700	Silver-seed gourd	carcuB0536
Csa5G139700	Silver-seed gourd	carcuB0570
Csa5G139700	Silver-seed gourd	carcuB1005
Csa5G139700	Watermelon (97103) v2	cuwmbB381
Csa5G139700	Watermelon (97103) v2	cuwmbB384
Csa5G139700	Wax gourd	cuwgoB481
Csa5G139700	Cucumber (Chinese Long) v2	cucuB095
Csa5G139700	Cucumber (Chinese Long) v2	cucuB142
Csa5G139700	Cucumber (Gy14) v1	cgycuB131
Csa5G139700	Cucumber (Gy14) v1	cgycuB369
Csa5G139700	Cucurbita maxima (Rimu)	cmacuB292
Csa5G139700	Cucurbita maxima (Rimu)	cmacuB342
Csa5G139700	Cucurbita maxima (Rimu)	cmacuB419
Csa5G139700	Cucurbita maxima (Rimu)	cmacuB612
Csa5G139700	Cucurbita moschata (Rifu)	cmocuB251
Csa5G139700	Cucurbita moschata (Rifu)	cmocuB279
Csa5G139700	Cucurbita moschata (Rifu)	cmocuB329
Csa5G139700	Cucurbita moschata (Rifu)	cmocuB409
Csa5G139700	Cucurbita moschata (Rifu)	cmocuB603
Csa5G139700	Melon (DHL92) v3.5.1	cumeB402
Csa5G139700	Melon (DHL92) v3.5.1	cumeB406
Csa5G139700	Melon (DHL92) v3.5.1	cumeB408
Csa5G139700	Watermelon (Charleston Gray)	cuwcgB392
Csa5G139700	Watermelon (Charleston Gray)	cuwcgB395
Csa5G139700	Watermelon (97103) v1	cuwmB397
Csa5G139700	Watermelon (97103) v1	cuwmB402
Csa5G139700	Cucurbita pepo (Zucchini)	cpecuB043
Csa5G139700	Cucurbita pepo (Zucchini)	cpecuB188
Csa5G139700	Cucurbita pepo (Zucchini)	cpecuB225
Csa5G139700	Cucurbita pepo (Zucchini)	cpecuB622
Csa5G139700	Cucurbita pepo (Zucchini)	cpecuB730
Csa5G139700	Bottle gourd (USVL1VR-Ls)	culsiB377
Csa5G139700	Bottle gourd (USVL1VR-Ls)	culsiB378
Csa5G139700	Cucumber (Gy14) v2	cgybcuB125
Csa5G139700	Cucumber (Gy14) v2	cgybcuB183