Csa5G136880 (gene) Cucumber (Chinese Long) v2

NameCsa5G136880
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr5 : 3252661 .. 3252956 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGATGTAGTTGATGGCCAAAAAGGAAAGAATAAGGCTTGTTGGTTGAGAATTTAATAAGTCTTGAGAGGTTATGCTCAGGGCTTAGTCATTGTGAGGATGTCCTAGACGAGAGGGTTGGTGCTTGGCGTGGAGATTCTAGGCGTTGGGGCTTAAGACCAGACGAGATAATTCCAAAGAGGTTATCTAGGCGATGGAAACTAGTAAGTGAAAGCTTTGTGTATTATCTTTTGACCGTGAGTGCAAGCTTGGTGAGGAGACTTGGGCTACGTAAGGAAGGGCTTACACGCTAG

mRNA sequence

ATGGAAGATGTAGTTGATGGCCAAAAAGGAAAGAATAAGGCTTGGCTTAGTCATTGTGAGGATGTCCTAGACGAGAGGGTTGGTGCTTGGCGTGGAGATTCTAGGCGTTGGGGCTTAAGACCAGACGAGATAATTCCAAAGAGGTTATCTAGGCGATGGAAACTAGTAAGTGAAAGCTTTGTGTATTATCTTTTGACCGTGAGTGCAAGCTTGGTGAGGAGACTTGGGCTACGTAAGGAAGGGCTTACACGCTAG

Coding sequence (CDS)

ATGGAAGATGTAGTTGATGGCCAAAAAGGAAAGAATAAGGCTTGGCTTAGTCATTGTGAGGATGTCCTAGACGAGAGGGTTGGTGCTTGGCGTGGAGATTCTAGGCGTTGGGGCTTAAGACCAGACGAGATAATTCCAAAGAGGTTATCTAGGCGATGGAAACTAGTAAGTGAAAGCTTTGTGTATTATCTTTTGACCGTGAGTGCAAGCTTGGTGAGGAGACTTGGGCTACGTAAGGAAGGGCTTACACGCTAG

Protein sequence

MEDVVDGQKGKNKAWLSHCEDVLDERVGAWRGDSRRWGLRPDEIIPKRLSRRWKLVSESFVYYLLTVSASLVRRLGLRKEGLTR*
BLAST of Csa5G136880 vs. TrEMBL
Match: A0A0A0KLQ5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G136880 PE=4 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 3.3e-41
Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 1

Query: 1  MEDVVDGQKGKNKAWLSHCEDVLDERVGAWRGDSRRWGLRPDEIIPKRLSRRWKLVSESF 60
          MEDVVDGQKGKNKAWLSHCEDVLDERVGAWRGDSRRWGLRPDEIIPKRLSRRWKLVSESF
Sbjct: 1  MEDVVDGQKGKNKAWLSHCEDVLDERVGAWRGDSRRWGLRPDEIIPKRLSRRWKLVSESF 60

Query: 61 VYYLLTVSASLVRRLGLRKEGLTR 85
          VYYLLTVSASLVRRLGLRKEGLTR
Sbjct: 61 VYYLLTVSASLVRRLGLRKEGLTR 84

BLAST of Csa5G136880 vs. NCBI nr
Match: gi|700194627|gb|KGN49804.1| (hypothetical protein Csa_5G136880 [Cucumis sativus])

HSP 1 Score: 175.3 bits (443), Expect = 4.7e-41
Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 1

Query: 1  MEDVVDGQKGKNKAWLSHCEDVLDERVGAWRGDSRRWGLRPDEIIPKRLSRRWKLVSESF 60
          MEDVVDGQKGKNKAWLSHCEDVLDERVGAWRGDSRRWGLRPDEIIPKRLSRRWKLVSESF
Sbjct: 1  MEDVVDGQKGKNKAWLSHCEDVLDERVGAWRGDSRRWGLRPDEIIPKRLSRRWKLVSESF 60

Query: 61 VYYLLTVSASLVRRLGLRKEGLTR 85
          VYYLLTVSASLVRRLGLRKEGLTR
Sbjct: 61 VYYLLTVSASLVRRLGLRKEGLTR 84

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KLQ5_CUCSA3.3e-41100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_5G136880 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700194627|gb|KGN49804.1|4.7e-41100.00hypothetical protein Csa_5G136880 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa5G136880.1Csa5G136880.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa5G136880CSPI05G02600Wild cucumber (PI 183967)cpicuB240
The following gene(s) are paralogous to this gene:

None