Csa5G077200 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa5G077200
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr5 : 2289852 .. 2290124 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACCACCAGAGGGCCTCTAATTGGTGATTTTTTGGCAATGCACAAAAATCGAGGTAGAAAAAACCCTTAGTGTAGCGTTTGAAAGTTGAAGAAGGGTTGACGTCATGATGACATCATTGTGATGTTAGCAAGATAGAGGAGGTGCAGCTGACGGCTCGAAGAGGCGTGGTTGATGGCTTCGAGGGTTTGCTCGCGGTTGACTCCGGTTCAAGGTGGTCAGCTTCGCCATATTTGATACACTACTTCTTACAAGACAACTTTAGAATTTAA

mRNA sequence

ATGGACCACCAGAGGGCCTCTAATTGCAAGATAGAGGAGGTGCAGCTGACGGCTCGAAGAGGCGTGGTTGATGGCTTCGAGGGTTTGCTCGCGGTTGACTCCGGTTCAAGGTGGTCAGCTTCGCCATATTTGATACACTACTTCTTACAAGACAACTTTAGAATTTAA

Coding sequence (CDS)

ATGGACCACCAGAGGGCCTCTAATTGCAAGATAGAGGAGGTGCAGCTGACGGCTCGAAGAGGCGTGGTTGATGGCTTCGAGGGTTTGCTCGCGGTTGACTCCGGTTCAAGGTGGTCAGCTTCGCCATATTTGATACACTACTTCTTACAAGACAACTTTAGAATTTAA

Protein sequence

MDHQRASNCKIEEVQLTARRGVVDGFEGLLAVDSGSRWSASPYLIHYFLQDNFRI*
Homology
[Close]
BLAST of Csa5G077200 vs. TrEMBL
Match: A0A0A0KPP5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G077200 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 1.6e-23
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 1 

Query: 1  MDHQRASNCKIEEVQLTARRGVVDGFEGLLAVDSGSRWSASPYLIHYFLQDNFRI 56
          MDHQRASNCKIEEVQLTARRGVVDGFEGLLAVDSGSRWSASPYLIHYFLQDNFRI
Sbjct: 1  MDHQRASNCKIEEVQLTARRGVVDGFEGLLAVDSGSRWSASPYLIHYFLQDNFRI 55

[Close]
BLAST of Csa5G077200 vs. NCBI nr
Match: gi|700194524|gb|KGN49701.1| (hypothetical protein Csa_5G077200 [Cucumis sativus])

HSP 1 Score: 115.9 bits (289), Expect = 2.2e-23
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 1 

Query: 1  MDHQRASNCKIEEVQLTARRGVVDGFEGLLAVDSGSRWSASPYLIHYFLQDNFRI 56
          MDHQRASNCKIEEVQLTARRGVVDGFEGLLAVDSGSRWSASPYLIHYFLQDNFRI
Sbjct: 1  MDHQRASNCKIEEVQLTARRGVVDGFEGLLAVDSGSRWSASPYLIHYFLQDNFRI 55

The following BLAST results are available for this feature:
BLAST of Csa5G077200 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KPP5_CUCSA1.6e-23100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_5G077200 PE=4 SV=1[more]
BLAST of Csa5G077200 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700194524|gb|KGN49701.1|2.2e-23100.00hypothetical protein Csa_5G077200 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa5G077200.1Csa5G077200.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa5G077200Watermelon (97103) v2cuwmbB359
Csa5G077200Cucumber (Gy14) v1cgycuB280
Csa5G077200Cucurbita maxima (Rimu)cmacuB760
Csa5G077200Cucurbita moschata (Rifu)cmocuB745
Csa5G077200Melon (DHL92) v3.5.1cumeB381
Csa5G077200Watermelon (Charleston Gray)cuwcgB363
Csa5G077200Watermelon (97103) v1cuwmB436
Csa5G077200Cucurbita pepo (Zucchini)cpecuB448
Csa5G077200Bottle gourd (USVL1VR-Ls)culsiB338
Csa5G077200Cucumber (Gy14) v2cgybcuB225
Csa5G077200Melon (DHL92) v3.6.1cumedB365