Csa5G067660 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa5G067660
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr5 : 2093823 .. 2095964 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTGCGGCGGTTGCTGGAGTTGGTGGCCCGAAGTTTGCTAGCGGAGTTGTTAGAAATGACACCCAATGGCCAGCCGACAATGGTCATCAGGATTGGTGTTCGGAGTTGGTCGACAAATTTTTTAGATTGAGTTAAAATAAAAAAGTAATTCATGGGATTGAATAGATTTTACTATTCAAACCCATGGAAAAGAGTGTAGGATGTGAAACTCACACCTAAGTTAAGAATTAAAAGAAATTTTTTTGACTAAGTGTTTAAACTAAGCGTTTTGCATAAGAAGGCATTTTGAATTGGGTGCGCGTTAAGAATCTATTCCTAAGGTAGTCCGCAAGAAGGATATGCGATAAGACCTATAAGTTTAAGAGTTTTTATGAAAGAAAAGGGTTTCGCGAATTGGTGTTAGGCGAGAATAAGGATTTGGTGAGAAGAAGTAAGAAAAGTTCAAAGCAATTTCTTAAGTGTGTTAAATGGGCCATATGTAGAGTTTAATTTAAGCATGTTTAAGAGTTAACCTTAAGCTCACATGTGCATCACTAAGAGTAGGAGTTGGCAAGCTAACATGAGTTTAGGTATAACTAAGCTGGTCTAAGGACTAGTATAAATAAAGGACCTCAGTCAATTGTTAAGCATTGTTACTCTGCCTTTTTTAAGAGAAAAATTAAGTGTTGAAGTGTTGTTCGGGCGTTTTGCGAGAAGGCTATGCGAGAAGAGGAAAAAAATGAGCATTTCAGAATTAAGGCTAAGTGTTGTGAGTATTTTCACTCAAAGTTTTTTGCTAAAAGTTTTCTTATAAAATCTTAATTGATTTGAAAGGATGGTTTCAAATATGAAAGTTTGGAAAAGAAGATTTATATGCAAAGCTTACATGTTTTCCAGTTTTCAAGGAGATTTATATGAAAATTTGATGTTATGATTTTAAGCATGATCTGATTATTGTGATTTCATTACTATAAATGGTGTTTAGGCCATTAGTTGCTTCCTTTGAAACGAGCTAACTTTTATGTGCACATAAAGACTAAAGGACACAATGAGTAAAGAAACTATGCAGTGATGATATGTTAGTTAATACGTTGAAATGAGCGTATTATACTTAACGACCTAAGCAACAAGGACATATTTGTATACTCTCGGATGCTGATGATTTCAGTAGTCTAAACGCGAAGTTACGTGATCTAGCGTAGAGAGTGATTCAGGATCCTTGACGAAAGGAATGTTTGGTAAATAATGTATGATATGCAAAATGATGTATCTATGTAAAATGATATATTTCTTTATTATGTTGATAAAATGATATTTGTGAAAAGGTATTGCAAAAAGGACTTCATAAAACCTCACTGAGTATTGTAGATTTATGTTTTCAAAATCTCATCTTCCAGAAATCAGGCGTTAAGGCCAAATAGAGAAGAAAGGAAAGGCTTGTTGGACGAGAAGGCTGCCAGTCATTTAGTTTAAGATTAATTAAAGTGTTGTATAGTACTTTTGGTTAAGTATTGTATTTTGTATTAAGCATTAAAGGCCTTGTTAAGTTAATAAAGTTTATGTTTGGTATATTTATGTGTGAAGTTACTTATATCGCCTAGAAGTTGTTTGTTATGCATCAGTTCAAGAAATTCAGAGATTAAGTTGAGCTTAAACCTCAAGAATGAGTGTCTTTGGCATTTTTCGCGTCAAGATGCTCCAAGTTGCACAGTGTCTCCCATGGCAAGGAAGGTTGTGTGTTGGGCAAGGTGTGACATAAGAAGCCTTTGTTTACACTCTTGTTGAGCAATAGTGAAGACGGTCAACGATAGCCAATGTTTTAAGACAATTGGTTCGTTGCCAACCATCATAAAAATCGGCCGTCAAGCATTATGGCTATTGGTCATTAACCATCACAATGACCATTTGTTAATAGTTACGACATCGATAATTAATGATAATGATAAGTATTAGTCGATCAAGATGTTCACTTGACGACAGTAACGTCCAAATTAGTTGTAGGTCACCAATGACCAAGATGATTGATAACTGATGATCCATAATTGACGGTCAAGACAATATGAAGGCGACGATCAAGATGATCTGAAGCCAACCGTTAAGATAATCTGTTATCGTGGCCGTCATGATCGTCGATCGATCATAATCAGTCATCATGGTTGA

mRNA sequence

ATGTTTGCGGCGGTTGCTGGAGTTGGTGGCCCGAAGTTTGCTAGCGGAGTTGTTAGAAATGACACCCAATGGCCAGCCGACAATGGTCATCAGGATTGGTGTTCGGAACAATATGAAGGCGACGATCAAGATGATCTGAAGCCAACCGTTAAGATAATCTGTTATCGTGGCCGTCATGATCGTCGATCGATCATAATCAGTCATCATGGTTGA

Coding sequence (CDS)

ATGTTTGCGGCGGTTGCTGGAGTTGGTGGCCCGAAGTTTGCTAGCGGAGTTGTTAGAAATGACACCCAATGGCCAGCCGACAATGGTCATCAGGATTGGTGTTCGGAACAATATGAAGGCGACGATCAAGATGATCTGAAGCCAACCGTTAAGATAATCTGTTATCGTGGCCGTCATGATCGTCGATCGATCATAATCAGTCATCATGGTTGA

Protein sequence

MFAAVAGVGGPKFASGVVRNDTQWPADNGHQDWCSEQYEGDDQDDLKPTVKIICYRGRHDRRSIIISHHG*
Homology
[Close]
BLAST of Csa5G067660 vs. TrEMBL
Match: A0A0A0KJE6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G067660 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 2.2e-35
Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 1 

Query: 1  MFAAVAGVGGPKFASGVVRNDTQWPADNGHQDWCSEQYEGDDQDDLKPTVKIICYRGRHD 60
          MFAAVAGVGGPKFASGVVRNDTQWPADNGHQDWCSEQYEGDDQDDLKPTVKIICYRGRHD
Sbjct: 1  MFAAVAGVGGPKFASGVVRNDTQWPADNGHQDWCSEQYEGDDQDDLKPTVKIICYRGRHD 60

Query: 61 RRSIIISHHG 71
          RRSIIISHHG
Sbjct: 61 RRSIIISHHG 70

[Close]
BLAST of Csa5G067660 vs. NCBI nr
Match: gi|700194511|gb|KGN49688.1| (hypothetical protein Csa_5G067660 [Cucumis sativus])

HSP 1 Score: 155.6 bits (392), Expect = 3.2e-35
Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 1 

Query: 1  MFAAVAGVGGPKFASGVVRNDTQWPADNGHQDWCSEQYEGDDQDDLKPTVKIICYRGRHD 60
          MFAAVAGVGGPKFASGVVRNDTQWPADNGHQDWCSEQYEGDDQDDLKPTVKIICYRGRHD
Sbjct: 1  MFAAVAGVGGPKFASGVVRNDTQWPADNGHQDWCSEQYEGDDQDDLKPTVKIICYRGRHD 60

Query: 61 RRSIIISHHG 71
          RRSIIISHHG
Sbjct: 61 RRSIIISHHG 70

The following BLAST results are available for this feature:
BLAST of Csa5G067660 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KJE6_CUCSA2.2e-35100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_5G067660 PE=4 SV=1[more]
BLAST of Csa5G067660 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700194511|gb|KGN49688.1|3.2e-35100.00hypothetical protein Csa_5G067660 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa5G067660.1Csa5G067660.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa5G067660Cucurbita pepo (Zucchini)cpecuB448
Csa5G067660Bottle gourd (USVL1VR-Ls)culsiB338
Csa5G067660Cucumber (Gy14) v2cgybcuB225
Csa5G067660Melon (DHL92) v3.6.1cumedB365
Csa5G067660Cucumber (Gy14) v1cgycuB378
Csa5G067660Cucurbita maxima (Rimu)cmacuB760
Csa5G067660Cucurbita moschata (Rifu)cmocuB745
Csa5G067660Watermelon (Charleston Gray)cuwcgB363
Csa5G067660Watermelon (97103) v1cuwmB436