Csa5G065650 (gene) Cucumber (Chinese Long) v2

NameCsa5G065650
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr5 : 2032862 .. 2033151 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACGGTGACAACGTGATGATATTAGTGGATGTGGTTGTCGACGGTGATTGCTCCGTTCCTATTCCAACAAGGAAAGGTGTGACAATGCTTTACCAAGAAATCAGTTCACAATTGTTATGGCCTCGTCATTTGGTCATTCCTCAAGACGAGAAGGTAATATGGTTCTTATTGAGTTATTTGATTTGAATATATTTCATATGGTTGACATTTTATGTTTGTAGCAACAGAGGAAAAACGAGTTCATCCAAGCTGATGAACGAGCACCATCACCGATCCAGACTAGGTAG

mRNA sequence

ATGGACGGTGACAACGTGATGATATTAGTGGATGTGGTTGTCGACGGTGATTGCTCCGTTCCTATTCCAACAAGGAAAGGTGTGACAATGCTTTACCAAGAAATCAGTTCACAATTGTTATGGCCTCGTCATTTGGTCATTCCTCAAGACGAGAAGCAACAGAGGAAAAACGAGTTCATCCAAGCTGATGAACGAGCACCATCACCGATCCAGACTAGGTAG

Coding sequence (CDS)

ATGGACGGTGACAACGTGATGATATTAGTGGATGTGGTTGTCGACGGTGATTGCTCCGTTCCTATTCCAACAAGGAAAGGTGTGACAATGCTTTACCAAGAAATCAGTTCACAATTGTTATGGCCTCGTCATTTGGTCATTCCTCAAGACGAGAAGCAACAGAGGAAAAACGAGTTCATCCAAGCTGATGAACGAGCACCATCACCGATCCAGACTAGGTAG

Protein sequence

MDGDNVMILVDVVVDGDCSVPIPTRKGVTMLYQEISSQLLWPRHLVIPQDEKQQRKNEFIQADERAPSPIQTR*
BLAST of Csa5G065650 vs. TrEMBL
Match: A0A0A0KMP7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G065650 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 5.8e-34
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 1

Query: 1  MDGDNVMILVDVVVDGDCSVPIPTRKGVTMLYQEISSQLLWPRHLVIPQDEKQQRKNEFI 60
          MDGDNVMILVDVVVDGDCSVPIPTRKGVTMLYQEISSQLLWPRHLVIPQDEKQQRKNEFI
Sbjct: 1  MDGDNVMILVDVVVDGDCSVPIPTRKGVTMLYQEISSQLLWPRHLVIPQDEKQQRKNEFI 60

Query: 61 QADERAPSPIQTR 74
          QADERAPSPIQTR
Sbjct: 61 QADERAPSPIQTR 73

BLAST of Csa5G065650 vs. TrEMBL
Match: A0A0A0KCE4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G211850 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 9.2e-08
Identity = 27/51 (52.94%), Postives = 39/51 (76.47%), Query Frame = 1

Query: 2   DGDNVMILVDVVVDGDCSVPIPTRKGVTMLYQEISSQLLWPRHLVIPQDEK 53
           DG+N+ + VDVV+DG   +P PT++GVT L  EI S L+WPRHLV+ +++K
Sbjct: 129 DGENIKVSVDVVLDGKGVIPKPTKEGVTKLTHEIGSHLMWPRHLVLTRNDK 179

BLAST of Csa5G065650 vs. NCBI nr
Match: gi|700194505|gb|KGN49682.1| (hypothetical protein Csa_5G065650 [Cucumis sativus])

HSP 1 Score: 151.0 bits (380), Expect = 8.3e-34
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 1

Query: 1  MDGDNVMILVDVVVDGDCSVPIPTRKGVTMLYQEISSQLLWPRHLVIPQDEKQQRKNEFI 60
          MDGDNVMILVDVVVDGDCSVPIPTRKGVTMLYQEISSQLLWPRHLVIPQDEKQQRKNEFI
Sbjct: 1  MDGDNVMILVDVVVDGDCSVPIPTRKGVTMLYQEISSQLLWPRHLVIPQDEKQQRKNEFI 60

Query: 61 QADERAPSPIQTR 74
          QADERAPSPIQTR
Sbjct: 61 QADERAPSPIQTR 73

BLAST of Csa5G065650 vs. NCBI nr
Match: gi|659134106|ref|XP_008467031.1| (PREDICTED: uncharacterized protein LOC103504458, partial [Cucumis melo])

HSP 1 Score: 89.7 bits (221), Expect = 2.3e-15
Identity = 43/68 (63.24%), Postives = 51/68 (75.00%), Query Frame = 1

Query: 1   MDGDNVMILVDVVVDGDCSVPIPTRKGVTMLYQEISSQLLWPRHLVIPQDEKQQRKNEFI 60
           MDGDNV + VD+V DG+C VP+PTR+G TML +E+ SQLLWPRHLVIP DEK +      
Sbjct: 177 MDGDNVKVSVDMVTDGNCFVPVPTREGRTMLSEEVGSQLLWPRHLVIPLDEKMK---SVY 236

Query: 61  QADERAPS 69
           QAD R PS
Sbjct: 237 QADSRLPS 241

BLAST of Csa5G065650 vs. NCBI nr
Match: gi|659072230|ref|XP_008464173.1| (PREDICTED: uncharacterized protein LOC103502117 [Cucumis melo])

HSP 1 Score: 80.9 bits (198), Expect = 1.0e-12
Identity = 40/68 (58.82%), Postives = 49/68 (72.06%), Query Frame = 1

Query: 1   MDGDNVMILVDVVVDGDCSVPIPTRKGVTMLYQEISSQLLWPRHLVIPQDEKQQRKNEFI 60
           MDGDNV + VD+V DG+C VP+PTR+  TML QE+ SQLLWPRHLVIP D+K +      
Sbjct: 910 MDGDNVKVSVDMVTDGNCFVPVPTRECRTMLSQEVGSQLLWPRHLVIPLDKKMK---SVY 969

Query: 61  QADERAPS 69
           QAD +  S
Sbjct: 970 QADPQLSS 974

BLAST of Csa5G065650 vs. NCBI nr
Match: gi|778714054|ref|XP_011657178.1| (PREDICTED: uncharacterized protein LOC105435814 isoform X1 [Cucumis sativus])

HSP 1 Score: 65.1 bits (157), Expect = 6.0e-08
Identity = 27/53 (50.94%), Postives = 41/53 (77.36%), Query Frame = 1

Query: 2  DGDNVMILVDVVVDGDCSVPIPTRKGVTMLYQEISSQLLWPRHLVIPQDEKQQ 55
          DG+N+ + VDVV+DG   +P PT++GVT L  EI S L+WPRHLV+ +++K++
Sbjct: 22 DGENIKVSVDVVLDGKGVIPKPTKEGVTKLTHEIGSHLMWPRHLVLTRNDKKE 74

BLAST of Csa5G065650 vs. NCBI nr
Match: gi|778714056|ref|XP_011657179.1| (PREDICTED: uncharacterized protein LOC105435814 isoform X2 [Cucumis sativus])

HSP 1 Score: 64.7 bits (156), Expect = 7.8e-08
Identity = 27/52 (51.92%), Postives = 40/52 (76.92%), Query Frame = 1

Query: 2  DGDNVMILVDVVVDGDCSVPIPTRKGVTMLYQEISSQLLWPRHLVIPQDEKQ 54
          DG+N+ + VDVV+DG   +P PT++GVT L  EI S L+WPRHLV+ +++K+
Sbjct: 22 DGENIKVSVDVVLDGKGVIPKPTKEGVTKLTHEIGSHLMWPRHLVLTRNDKE 73

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KMP7_CUCSA5.8e-34100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_5G065650 PE=4 SV=1[more]
A0A0A0KCE4_CUCSA9.2e-0852.94Uncharacterized protein OS=Cucumis sativus GN=Csa_6G211850 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700194505|gb|KGN49682.1|8.3e-34100.00hypothetical protein Csa_5G065650 [Cucumis sativus][more]
gi|659134106|ref|XP_008467031.1|2.3e-1563.24PREDICTED: uncharacterized protein LOC103504458, partial [Cucumis melo][more]
gi|659072230|ref|XP_008464173.1|1.0e-1258.82PREDICTED: uncharacterized protein LOC103502117 [Cucumis melo][more]
gi|778714054|ref|XP_011657178.1|6.0e-0850.94PREDICTED: uncharacterized protein LOC105435814 isoform X1 [Cucumis sativus][more]
gi|778714056|ref|XP_011657179.1|7.8e-0851.92PREDICTED: uncharacterized protein LOC105435814 isoform X2 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa5G065650.1Csa5G065650.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None