Csa5G056610 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa5G056610
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr5 : 1858943 .. 1864003 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTCTAGGCGTTTTGAGATGGCTTAACGAAACGACTTTAGAGGTTATCATGCATTTGGAGATTATTTTTGGCTTGTGGCTAGGCGAGAAGAACTTCCAAGTGGGTGTCATTGGGTGAGAAAGGTGCTATGCAAGAAGACATAGAGGTTAGTAAGGGATTTTGGACGTATAAGGTTGGTAAGAAAGAAGGATCATAGAGGTTAGGTGTTTTAACTAGGCGACAAGGAAGGGCTATGCAAGGTTGGACATGCATGTGACATGTTTTAAGCAATCGGTTTAAGAAATAATCCAAGTGTCTTAACCATGTTAACATGCATTTTGAGGTGGAAAGGAAGTTTGAAGTGTCTTAAGGAGGTTTAAGGGTGGATTAAGCAAGGTTGAGGTGTCAAGATAATTTCATGCAAGACTTTTTATAAATAGCTAACTTCAGCAAGGAGTTTCTCATAACTCACTTGGACATTTTCACTCAAATTGGTCTTAAGAATTCAAAAATTGTGTTTAGTTTATGACAGAGGGTTGGTGTGTATTTTGAATTCAAGGAGGTTGACGTTTTGATCAAGAGAAGGCGAGAAGGTTATTTCTCGGGTGAACCTGAGCAAGGTTCATTTTAAGTGGGCTACAAGACTCGTCTTTTGGATTTTGGTTCTAAAATTTTGAGGTAAGAAAACTAAGTAATTTTAGAGAAACTTTATAAAAGAAAGTATTTTCATTTGAGTTCTGAATTTTACGTTATAAATCTCTAAAGTAGAAGTAAGGTTCTAGTCTACGTGGTTTTCATGTCTATACGTAGGATGAATAAAAAGGAAGATACTAGTGAAGCAAATGAGACATCTCGCGCAAGAACCAAGTGGAGGGAACTCATTTGGTGATTAACATCTCCAAACAAGAAACCGCGTCATCACGTGAGGAAGGTTCACTAGAGGACAAAGAGTAGGAGTTGGAGATGATGTGACTCGCAACAAACACTTTTTGGCGAGCGGCGCTGACATGCTCAAAAGAATAGAAATTATAGAAATTTTTCGCCTAAAGCTACCTATAAAAGCAATTCCACCTAGAGATATAGGCATGTAGGGGCCATGATCAGGGTCTGCATGGGCTGACTGCGATTTGAATAGACGAAAACCTAGAGAGTTGGTGGCAAGGATTAACCTCCCCACCATGTGTACAACACTCCTTCTTCGACTAGATTGTAATGCGAAAGCTTACAATTTGAGAGAACAAGAGTCCAGTCCCCATTCCCCCTAGCTTGTATTCCACTTTCTTCTTCTTTCCATTTTATTATTTATTTACAATGTATTTAGTTATATTGTACATCGGTCGAAGACCTTCATTATTTAATACAATGCATCCTTATACACTTTTCAATCTATCTATGCCTTTATTGTTCATCTGCTTTTGTGTTCTTTGTAGTTTAGGTCTAAGATGTGTTCGTGATAAGTGATATTTATTTATAATGTTTAGTGTGTTAGCTGAGCTACATTCTACACTTGGCTAGTGTATGTCGCTAATTGCTCGAGAGGGTGAGTAGCAATGACGTAGCTAACACATGTAAGGAAGAGTTTTCTCAACCAGCTGGTGAGAAAACTTCATTCACTTGTATCTCGAAAGGCGAAAAGGTGTAGACTATAGACACCAAGAGGTTGTTGTCCTTAAACGTGAAGCACTCTAAGAAGAATAAATAAACATTACTAGATATAAACCATCTAGCTAGCCTTAGTCATTTGGATTATGAAGGGCAACCAAGTGTGGCGTTTAATGACTCTGAGAGAAGCACATTTTAATCCTAAGATAACTTGGTGAGTTATACCGCATCGAGGTAGTCATATAGCTTATTCACCTGATAGCATGAAACCTTCCTTCACTGCCTTTCTTACGCAAGTTCGTTCGCTCAATCTTCTATATTGCCATAATTTATTCCCCTATGCATAAGCCTCTTGGTGTAAGAAAGTATCTTTAGTTATTTTATTATTCTTTTAACTCAATCGTTATAATGCATAAATGATAAGTAGACCATAGAACTAATGTCTGGAGCCAATTTCCTATGTTCGACCTTGGATCTTCAAAGTAAACCTGCTGTTCGCTTGCACTTGGACAAACAGTAGAAAAACTTGTACTCGACAAGAACTTAGCTATTACGAGATGAATAGATATATAATGAGCATTTCGCATGCTATGATCATGACCCATGATTTATTACATAGAAAATCGCGCAATAAAGAAAGATATGGTGATTATCTTACGTGCGATGAACCTGCTTCGTGACGTATTGCAATTGCACTATACAAATGCAAAACTAATAAGTCCTAGCAAAGACTAATAATCACACACCCGTGAAAAACGATTTTGTACCAAGTCTAAATGATCTTGTACCCAATCCAAACGATCTTGTACCAATTCGAAATGATCTTGTACCAATCTTATACCCTTGTATACATAGTCTAAACGATCTTGTACTCTTGTATCCAACCCAAATGATTTTGTACCTTTGTACCTAGTCTAAACGATTTTGTACCAAAGCTAAATAATCTATTAGTGATAATGGTCTATCTCTAGGATAGATCGTTTAAATATTGGTACAAGATCTTTGTTTAGATTTTGAACCAAGAAGAAAGAAAGAAAATGAGAGATGAAGAAGAAAGAAAAAATTATGGGAGAAGAAATGAATAAATTGCAAATAAGTAGAAATATGAAAAAGAAGTAATAATATGAAACGGAAAAAGTAAATGCAAACAAGAAGAAAAAGAACCGAAAAATCATCCCGCAATAATCAAAATCCAATAAGGTCAAATCTGTCATTTATGAAAAAGTAATTAACTTTATAAAATTTTCTTAAATTGTTATACCCGTAAATATTTAGCACTTTTGTTATATTTACGTAAATATCCACCGTTTTCAATATTTTAGAAAGTTTACATTTTTAGACTTTTTTTTTTTTGAGTTGTAGATTCACTTGTGACACAACACAAACTATAATTTTTCTTTTAATTTAACCTCCCTTGTATCGCTGCCCACAAACGGTAAGCACCTCTAGTCCTCTCCAATCTTCACAGTTCGGCACCTCCCCTCCGATCAGACGACGCTGGCGACCTCCGCTCACCCTCTTCAATCGAACAAAGACGGCGACTGTGACTCCGATCAGACCACCCACATTCGCCCTCCGTTTTGGTTCTCGGTTCAAAGGTGTTTCCCTTCTGTTCTTTTTCTTTTGTGTATCAATGTTTGAGGAATGTTTCAACTGATTTGACAGAACATATTATATATATATATATATGTATATGCTTTTTAATTTATTACTTCATATTAATATGTAGTCCCAACCGAGACGTTGAAATATATATGAAACATGGTTTAGGCATGAGGCTTTTGTGGCCCATTTATTTGAATTTTTTTAATGTACTTTTGTATTTATTTAATGTGGAATGAGCACATATATGGTGAGGCTGTGAGTTTTTGGAATATTATCTAGAATTTTTGGTATGGTTTAATCAGATTTGGGAGACCCTGGTGTTCTTTGGAAAGGTGAATCTTAATTTTTTTTGTTTTGAGAACATTTCTTTAATGAATTCATTCTGTTTTTTATACTAGATGGTATCTTCCTCCTCGTCTACATCTACCAATAGTAGTCAATCATCCACGTTTCCTTAAGTAGCGAGTACATTCATATCATCTAGCGTTGAAGATGAGTCGAAACCATTTTGGCAATATGTGGCCATGAATCAAAGATTGAATGAGGGAGGTGGAAACATTTCCTGGCAATGTAACTTTTGTCATTGCATAAAGAAAGTTCTTATACAAGGCTTAAAGCACATTTACTAGGTTTAAGTGGTTCTGGAATTGGAGCATGTAATAAAGTTACCCCTCAAGCTTTGGCCGAGATGCAAAAATGAGAAGATGAGGCGAAAGATCGAATGGCTAGAAAGACTTCTAAAAGCGTACCTGTGTTTGCAGCTTCTAGTGGTTTTAGTGGGAGTAAACATCCATCTCATTCTACCTTTGAGCAAGAAAAACGGCTCCAAGTGGAATAGAAAGATCCTTTAATATGGCATCAAAAGATCAAATGCATGCACTTATTGCACGGATGTTTTATTCTTCAGGATTGCCCTTTCATTTAGCTAGAAATCCATACTATGTAAACCTCGTACTTATTATGCAAATAATGTATTATCTGAATATTTGCCTCCTGGATATAATTTTTTGAGAAAAACCTTTCTTCAAAGGGAAAAGGACAATATTGAAAGATTGATTCAACCCATTAAAAATACATGGAAGGGAAACAACGTTAGTATTGTGTGTGATGGTTGGAGTGACTCACAAAGAAGACATCTGATAAATTGTATGCATTTCAGATAGCAAACCAATGTTTTTCAAAGGCAGTTGATTGCTTAGGTGAGGTCAAAGATAATAAATATTTGCAAATTTTCTGTAGGATGTGATTAAGGAAGTTGATCCTCATAATGTGATTCAAGTAATTATTGATAATGCTCCTAACTGCAAGGTGCAAGCCAACTTATTGAATCACAGTTTCCCGCAATTGTATGGACACCGTGTGTATTACATACTCTTAATCTTGCATTGAAGAATATGTGTGCAGCAAAAAATGTTGAAAATAATGCGCTTGTGTATGAGGAATGTAGTTGGATTTCTGATATCACCAGTGATGTGATGGCGGTGAAGAATTTTATGATGAATCATTCAATAAGGCTTGCTATTTTTAATGAGTTCGTAACTTTGAAATTACTTTCCATGGCAGAAATATTATGTTGAGTTCGAAGCCTTTCCATTAGAAGGAGTTTTTCTTGGTTGTATTGATATTTGCCCTTTGCTTTCTTTTATTTTTTCTTAGTGAAAGCAGACTTTTTTATCAAAAAAAAAAAAAGTGATAGTTGCTACCATACATACATCATACTCTTTTCTTTTTGTTTTTTTCTTCAATAATTTCTCTCCACTATTATCTTTTAATTAATTCTCTAATGTACTAATTAGGTTGTGGAAGCCTATATTCAGAACAAATGAAGAAAGATCACATCAGAACAAATTAACATTGATGGTGATCTTATGA

mRNA sequence

ATGGGTCTAGGCGTTTTGAGATGGCTTAACGAAACGACTTTAGAGGTTATCATGCATTTGGAGATTATTTTTGGCTTGTGGCTAGGCGAGAAGAACTTCCAAGTGGTTCGGCACCTCCCCTCCGATCAGACGACGCTGGCGACCTCCGCTCACCCTCTTCAATCGAACAAAGACGGCGACTGTGACTCCGATCAGACCACCCACATTCGCCCTCCGTTTTGGTTCTCGGTTCAAAGGTTGTGGAAGCCTATATTCAGAACAAATGAAGAAAGATCACATCAGAACAAATTAACATTGATGGTGATCTTATGA

Coding sequence (CDS)

ATGGGTCTAGGCGTTTTGAGATGGCTTAACGAAACGACTTTAGAGGTTATCATGCATTTGGAGATTATTTTTGGCTTGTGGCTAGGCGAGAAGAACTTCCAAGTGGTTCGGCACCTCCCCTCCGATCAGACGACGCTGGCGACCTCCGCTCACCCTCTTCAATCGAACAAAGACGGCGACTGTGACTCCGATCAGACCACCCACATTCGCCCTCCGTTTTGGTTCTCGGTTCAAAGGTTGTGGAAGCCTATATTCAGAACAAATGAAGAAAGATCACATCAGAACAAATTAACATTGATGGTGATCTTATGA

Protein sequence

MGLGVLRWLNETTLEVIMHLEIIFGLWLGEKNFQVVRHLPSDQTTLATSAHPLQSNKDGDCDSDQTTHIRPPFWFSVQRLWKPIFRTNEERSHQNKLTLMVIL*
Homology
[Close]
BLAST of Csa5G056610 vs. TrEMBL
Match: A0A0A0KJD4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G056610 PE=4 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 5.4e-54
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1 

Query: 1   MGLGVLRWLNETTLEVIMHLEIIFGLWLGEKNFQVVRHLPSDQTTLATSAHPLQSNKDGD 60
           MGLGVLRWLNETTLEVIMHLEIIFGLWLGEKNFQVVRHLPSDQTTLATSAHPLQSNKDGD
Sbjct: 1   MGLGVLRWLNETTLEVIMHLEIIFGLWLGEKNFQVVRHLPSDQTTLATSAHPLQSNKDGD 60

Query: 61  CDSDQTTHIRPPFWFSVQRLWKPIFRTNEERSHQNKLTLMVIL 104
           CDSDQTTHIRPPFWFSVQRLWKPIFRTNEERSHQNKLTLMVIL
Sbjct: 61  CDSDQTTHIRPPFWFSVQRLWKPIFRTNEERSHQNKLTLMVIL 103

[Close]
BLAST of Csa5G056610 vs. NCBI nr
Match: gi|700194496|gb|KGN49673.1| (hypothetical protein Csa_5G056610 [Cucumis sativus])

HSP 1 Score: 218.0 bits (554), Expect = 7.7e-54
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1 

Query: 1   MGLGVLRWLNETTLEVIMHLEIIFGLWLGEKNFQVVRHLPSDQTTLATSAHPLQSNKDGD 60
           MGLGVLRWLNETTLEVIMHLEIIFGLWLGEKNFQVVRHLPSDQTTLATSAHPLQSNKDGD
Sbjct: 1   MGLGVLRWLNETTLEVIMHLEIIFGLWLGEKNFQVVRHLPSDQTTLATSAHPLQSNKDGD 60

Query: 61  CDSDQTTHIRPPFWFSVQRLWKPIFRTNEERSHQNKLTLMVIL 104
           CDSDQTTHIRPPFWFSVQRLWKPIFRTNEERSHQNKLTLMVIL
Sbjct: 61  CDSDQTTHIRPPFWFSVQRLWKPIFRTNEERSHQNKLTLMVIL 103

The following BLAST results are available for this feature:
BLAST of Csa5G056610 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KJD4_CUCSA5.4e-54100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_5G056610 PE=4 SV=1[more]
BLAST of Csa5G056610 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700194496|gb|KGN49673.1|7.7e-54100.00hypothetical protein Csa_5G056610 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa5G056610.1Csa5G056610.1mRNA