BLAST of Csa5G003610 vs. Swiss-Prot
Match:
PP151_ARATH (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1)
HSP 1 Score: 913.7 bits (2360), Expect = 1.2e-264
Identity = 438/669 (65.47%), Postives = 539/669 (80.57%), Query Frame = 1
Query: 16 FLDSSPFSKLLNQCARSR-SARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVAR 75
F DSSPF+KLL+ C +S+ SA VHA +IKS F++E FIQNRLID Y KCG ++ R
Sbjct: 16 FTDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGR 75
Query: 76 KLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDE 135
++FD+M +RNI++WNS++ TK GFLD+A +F MP+ DQC+WNSM+SGF QH R +E
Sbjct: 76 QVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEE 135
Query: 136 ALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVD 195
AL YFA MH GF++NEYSF S LSAC+GL D+ G Q+HSL+ +S +LSDVY+GSALVD
Sbjct: 136 ALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVD 195
Query: 196 MYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVT 255
MYSKCG V AQ VFDEM R+ VSWNSLITC+EQNGP EAL +F M++ VEPDEVT
Sbjct: 196 MYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVT 255
Query: 256 LASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMM 315
LASV+SACA++SAIK GQ++H RVVK D+ RND+IL NA +DMYAKC+RI EAR IFD M
Sbjct: 256 LASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSM 315
Query: 316 PIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFR 375
PIR+V++ETSM+SGYA A+ K AR MF+ M ++V++WNALIAG TQNGENEEAL LF
Sbjct: 316 PIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFC 375
Query: 376 LLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLID 435
LLKRESV PTHY+F N+L ACA+LA+L LG QAH HVLKHGF+FQ GE+ D+FVGNSLID
Sbjct: 376 LLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLID 435
Query: 436 MYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVFCKMLESGEAPDHVT 495
MY+KCG VE G VF+ M+E+DCVSWNAMI+G+AQNG+GN+ALE+F +MLESGE PDH+T
Sbjct: 436 MYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHIT 495
Query: 496 MIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGRAGYLEEAKNLIEEM 555
MIGVL AC HAG ++EGR+YF SMT G+ PL+DHYTCMVDLLGRAG+LEEAK++IEEM
Sbjct: 496 MIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEM 555
Query: 556 SMQPDAIVWGSLLAACKVHRNIQLGEYVVKKLLEVDPENSGPYVLLSNMYAENRDWKNVV 615
MQPD+++WGSLLAACKVHRNI LG+YV +KLLEV+P NSGPYVLLSNMYAE W++V+
Sbjct: 556 PMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVM 615
Query: 616 RVRKLMRQRGVVKQPGCSWIEIQGELNVFMVKDKRHARKKEIYMVLRTILQQMKQAGYVP 675
VRK MR+ GV KQPGCSWI+IQG +VFMVKDK H RKK+I+ +L ++ +M+
Sbjct: 616 NVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMRPEQDHT 675
Query: 676 YVGSNEFDE 684
+GS +E
Sbjct: 676 EIGSLSSEE 684
BLAST of Csa5G003610 vs. Swiss-Prot
Match:
PP301_ARATH (Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1)
HSP 1 Score: 454.5 bits (1168), Expect = 2.0e-126
Identity = 252/630 (40.00%), Postives = 377/630 (59.84%), Query Frame = 1
Query: 58 NRLIDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQC 117
N +I Y + G ++ARKLFD M ER++ SWN +I + ++ L A +FE MP+ D C
Sbjct: 99 NGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVC 158
Query: 118 SWNSMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLV 177
SWN+M+SG+ Q+G D+A F +M N+ S+ + LSA +Q+ K+
Sbjct: 159 SWNTMLSGYAQNGCVDDARSVFDRMPEK----NDVSWNALLSAY--VQNSKMEEACMLFK 218
Query: 178 YRSNYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEAL 237
R N+ + + L+ + K ++ A+ FD M VR VSWN++IT Y Q+G +DEA
Sbjct: 219 SRENWA--LVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEAR 278
Query: 238 KIFVEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDM 297
++F E D T ++VS ++E +++ ++ + +E + NA+L
Sbjct: 279 QLFDE----SPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNE-----VSWNAMLAG 338
Query: 298 YAKCNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALI 357
Y + R+ A+ +FD+MP R+V + +M++GYA+ K+ A+ +F M +D ++W A+I
Sbjct: 339 YVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMI 398
Query: 358 AGCTQNGENEEALILFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFR 417
AG +Q+G + EAL LF ++RE +F + L+ CA++ L+LG+Q H ++K G+
Sbjct: 399 AGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGY- 458
Query: 418 FQYGEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKAL 477
++ FVGN+L+ MY KCGS+E +F+ M KD VSWN MI GY+++GFG AL
Sbjct: 459 -----ETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVAL 518
Query: 478 EVFCKMLESGEAPDHVTMIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDL 537
F M G PD TM+ VL ACSH GL+D+GR YF +MT +G+MP HY CMVDL
Sbjct: 519 RFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDL 578
Query: 538 LGRAGYLEEAKNLIEEMSMQPDAIVWGSLLAACKVHRNIQLGEYVVKKLLEVDPENSGPY 597
LGRAG LE+A NL++ M +PDA +WG+LL A +VH N +L E K+ ++PENSG Y
Sbjct: 579 LGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMY 638
Query: 598 VLLSNMYAENRDWKNVVRVRKLMRQRGVVKQPGCSWIEIQGELNVFMVKDKRHARKKEIY 657
VLLSN+YA + W +V ++R MR +GV K PG SWIEIQ + + F V D+ H K EI+
Sbjct: 639 VLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIF 698
Query: 658 MVLRTILQQMKQAGYVPYVGSNEFDEDEEQ 688
L + +MK+AGYV D +EE+
Sbjct: 699 AFLEELDLRMKKAGYVSKTSVVLHDVEEEE 705
HSP 2 Score: 134.0 bits (336), Expect = 6.1e-30
Identity = 94/339 (27.73%), Postives = 164/339 (48.38%), Query Frame = 1
Query: 51 ASETFIQNRLIDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEK 110
A++T IQ KCG D+ WN I ++ ++G ++A+ +F++
Sbjct: 43 ATQTQIQKSQTKPLLKCGDSDIKE-------------WNVAISSYMRTGRCNEALRVFKR 102
Query: 111 MPQVDQCSWNSMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLG 170
MP+ S+N MISG+ ++G F+ A F +M + S+ + ++L
Sbjct: 103 MPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLV----SWNVMIKGYVRNRNLGKA 162
Query: 171 SQIHSLVYRSNYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQN 230
++ ++ DV + ++ Y++ G V+ A+SVFD M ++ VSWN+L++ Y QN
Sbjct: 163 RELFEIMPER----DVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQN 222
Query: 231 GPVDEALKIFVEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLIL 290
++EA +F A V C +K+ + + AR D++
Sbjct: 223 SKMEEACMLF---------KSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVS 282
Query: 291 GNALLDMYAKCNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDV 350
N ++ YA+ +I+EAR +FD P++ V + T+MVSGY + V+ AR +F M ++
Sbjct: 283 WNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNE 342
Query: 351 ITWNALIAGCTQNGENEEALILFRLL--KRESVWPTHYT 388
++WNA++AG Q E A LF ++ + S W T T
Sbjct: 343 VSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMIT 351
HSP 3 Score: 117.5 bits (293), Expect = 5.9e-25
Identity = 97/350 (27.71%), Postives = 163/350 (46.57%), Query Frame = 1
Query: 220 WNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLASVVSACATISA-IKEGQQIHARV 279
WN I+ Y + G +EAL++F M + S VS IS ++ G+ AR
Sbjct: 67 WNVAISSYMRTGRCNEALRVFKRMPRW----------SSVSYNGMISGYLRNGEFELARK 126
Query: 280 VKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVA 339
+ + DL+ N ++ Y + + +AR +F++MP R V S +M+SGYA+ V A
Sbjct: 127 LFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDA 186
Query: 340 RYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVWPTHYTFGNLLNACANL 399
R +F M K+ ++WNAL++ QN + EEA +LF+ RE+ W ++ LL
Sbjct: 187 RSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFK--SREN-WAL-VSWNCLLGGFVKK 246
Query: 400 ADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLEKDCV 459
+ RQ F DV N++I Y + G ++ ++F +D
Sbjct: 247 KKIVEARQF----------FDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVF 306
Query: 460 SWNAMIVGYAQNGFGNKALEVFCKMLESGEAPDHVTMIGVLCACSHAGLLDEGRYYFRSM 519
+W AM+ GY QN +A E+F KM E E V+ +L ++ + F M
Sbjct: 307 TWTAMVSGYIQNRMVEEARELFDKMPERNE----VSWNAMLAGYVQGERMEMAKELFDVM 366
Query: 520 TAQHGLMPLKDHYTCMVDLLGRAGYLEEAKNLIEEMSMQPDAIVWGSLLA 569
++ + M+ + G + EAKNL ++M + D + W +++A
Sbjct: 367 PCRN-----VSTWNTMITGYAQCGKISEAKNLFDKMPKR-DPVSWAAMIA 382
HSP 4 Score: 94.0 bits (232), Expect = 7.0e-18
Identity = 90/371 (24.26%), Postives = 160/371 (43.13%), Query Frame = 1
Query: 184 SDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEM 243
SD+ + + Y + GR A VF M S VS+N +I+ Y +NG + A K+F EM
Sbjct: 62 SDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEM 121
Query: 244 IKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNR 303
E D V+ ++ + + +++ + + D+ N +L YA+
Sbjct: 122 ----PERDLVSWNVMIKGYVRNRNLGKARELFEIMPE-----RDVCSWNTMLSGYAQNGC 181
Query: 304 INEARIIFDMMPIRSVVSETSMVS-------------------------------GYAKA 363
+++AR +FD MP ++ VS +++S G+ K
Sbjct: 182 VDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKK 241
Query: 364 SKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVWPTHYTFGNLL 423
K+ AR F +M V+DV++WN +I G Q+G+ +EA LF ES +T+ ++
Sbjct: 242 KKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLF----DESPVQDVFTWTAMV 301
Query: 424 NACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLIDMYMKCGSVENGCRVFQHM 483
+ ++ R+ F + + N+++ Y++ +E +F M
Sbjct: 302 SGYIQNRMVEEAREL----------FDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVM 361
Query: 484 LEKDCVSWNAMIVGYAQNGFGNKALEVFCKMLESGEAPDHVTMIGVLCACSHAGLLDEGR 524
++ +WN MI GYAQ G ++A +F KM + D V+ ++ S +G E
Sbjct: 362 PCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKR----DPVSWAAMIAGYSQSGHSFEAL 405
HSP 5 Score: 74.3 bits (181), Expect = 5.7e-12
Identity = 62/243 (25.51%), Postives = 107/243 (44.03%), Query Frame = 1
Query: 17 LDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKL 76
L+ S FS L+ CA + ++H ++K + + F+ N L+ +Y KCG ++ A L
Sbjct: 407 LNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDL 466
Query: 77 FDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMP----QVDQCSWNSMISGFEQHGRF 136
F M ++I SWN++I +++ GF + A+ FE M + D + +++S G
Sbjct: 467 FKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLV 526
Query: 137 DEALVYFAQM-HGHGFLVN--EYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMG 196
D+ YF M +G + N Y+ L AGL + H+L+ + D +
Sbjct: 527 DKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLE-----DAHNLMKNMPFEPDAAIW 586
Query: 197 SALVDMYSKCGRVEYAQSVFDE---MTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKC 250
L+ G E A++ D+ M + + L Y +G + K+ V M
Sbjct: 587 GTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDK 644
BLAST of Csa5G003610 vs. Swiss-Prot
Match:
PP249_ARATH (Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1)
HSP 1 Score: 431.8 bits (1109), Expect = 1.4e-119
Identity = 236/671 (35.17%), Postives = 377/671 (56.18%), Query Frame = 1
Query: 18 DSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKLF 77
D F L+ CA+SR+ + ++H I+K +A + F+QN L+ Y +CG +D ARK+F
Sbjct: 133 DKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVF 192
Query: 78 DRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALV 137
D M ERN+ SW S+IC + + F DAV +F +M + ++ + NS+
Sbjct: 193 DEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSV--------------- 252
Query: 138 YFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYS 197
+ +SACA L+DL+ G ++++ + S + M SALVDMY
Sbjct: 253 ---------------TMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYM 312
Query: 198 KCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLAS 257
KC ++ A+ +FDE + N++ + Y + G EAL +F M+ GV PD +++ S
Sbjct: 313 KCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLS 372
Query: 258 VVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIR 317
+S+C+ + I G+ H V++ + F + + NAL+DMY KC+R + A IFD M +
Sbjct: 373 AISSCSQLRNILWGKSCHGYVLR-NGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNK 432
Query: 318 SVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILF-RLL 377
+VV+ S+V+GY + +V A F M K++++WN +I+G Q EEA+ +F +
Sbjct: 433 TVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQ 492
Query: 378 KRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLIDMY 437
+E V T ++ +AC +L L L + + ++ K+G + DV +G +L+DM+
Sbjct: 493 SQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQL------DVRLGTTLVDMF 552
Query: 438 MKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVFCKMLESGEAPDHVTMI 497
+CG E+ +F + +D +W A I A G +A+E+F M+E G PD V +
Sbjct: 553 SRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFV 612
Query: 498 GVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGRAGYLEEAKNLIEEMSM 557
G L ACSH GL+ +G+ F SM HG+ P HY CMVDLLGRAG LEEA LIE+M M
Sbjct: 613 GALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPM 672
Query: 558 QPDAIVWGSLLAACKVHRNIQLGEYVVKKLLEVDPENSGPYVLLSNMYAENRDWKNVVRV 617
+P+ ++W SLLAAC+V N+++ Y +K+ + PE +G YVLLSN+YA W ++ +V
Sbjct: 673 EPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKV 732
Query: 618 RKLMRQRGVVKQPGCSWIEIQGELNVFMVKDKRHARKKEIYMVLRTILQQMKQAGYVPYV 677
R M+++G+ K PG S I+I+G+ + F D+ H I +L + Q+ G+VP +
Sbjct: 733 RLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDL 766
Query: 678 GSNEFDEDEEQ 688
+ D DE++
Sbjct: 793 SNVLMDVDEKE 766
HSP 2 Score: 211.8 bits (538), Expect = 2.3e-53
Identity = 154/537 (28.68%), Postives = 261/537 (48.60%), Query Frame = 1
Query: 74 RKLFDRMLERNIFSWNSII---CAFTKSGFLDDAVHIFEKMPQVDQC-SWNSMISGFEQH 133
R L + L+ ++ + ++ C L A +FE C +NS+I G+
Sbjct: 53 RSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASS 112
Query: 134 GRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMG 193
G +EA++ F +M G ++Y+F LSACA + G QIH L+ + Y D+++
Sbjct: 113 GLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQ 172
Query: 194 SALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKC-GV 253
++LV Y++CG ++ A+ VFDEM+ R+ VSW S+I Y + +A+ +F M++ V
Sbjct: 173 NSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEV 232
Query: 254 EPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEAR 313
P+ VT+ V+SACA + ++ G++++A + NDL++ +AL+DMY KCN I+ A+
Sbjct: 233 TPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMV-SALVDMYMKCNAIDVAK 292
Query: 314 IIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVK----DVITWNALIAGCTQNG 373
+FD ++ +M S Y + + A +F+ MM D I+ + I+ C+Q
Sbjct: 293 RLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQ-- 352
Query: 374 ENEEALILFRLLKRESVWPTH---YTFGNLLNACANLADLQLGRQAHSHVLKHGFR-FQY 433
R +W Y N + N+ + + H FR F
Sbjct: 353 ------------LRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDR 412
Query: 434 GEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVF 493
+ V NS++ Y++ G V+ F+ M EK+ VSWN +I G Q +A+EVF
Sbjct: 413 MSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVF 472
Query: 494 CKM-LESGEAPDHVTMIGVLCACSHAGLLDEGR--YYFRSMTAQHGLMPLKDHYTCMVDL 553
C M + G D VTM+ + AC H G LD + YY+ ++G+ T +VD+
Sbjct: 473 CSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYY---IEKNGIQLDVRLGTTLVDM 532
Query: 554 LGRAGYLEEAKNLIEEMSMQPDAIVW----GSLLAACKVHRNIQLGEYVVKKLLEVD 591
R G E A ++ ++ + D W G++ A R I+L + ++++ L+ D
Sbjct: 533 FSRCGDPESAMSIFNSLTNR-DVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPD 570
BLAST of Csa5G003610 vs. Swiss-Prot
Match:
PP307_ARATH (Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2)
HSP 1 Score: 431.8 bits (1109), Expect = 1.4e-119
Identity = 239/668 (35.78%), Postives = 368/668 (55.09%), Query Frame = 1
Query: 6 LVKHLKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYG 65
L K + D L DS+ + L+ C+ + ++HA K FAS I+ L+++Y
Sbjct: 376 LFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYA 435
Query: 66 KCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISG 125
KC ++ A F N+ WN G LDD + F
Sbjct: 436 KCADIETALDYFLETEVENVVLWN---VMLVAYGLLDDLRNSFR---------------- 495
Query: 126 FEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSD 185
F QM + N+Y++ S L C L DL+LG QIHS + ++N+ +
Sbjct: 496 ------------IFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLN 555
Query: 186 VYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIK 245
Y+ S L+DMY+K G+++ A + + VSW ++I Y Q D+AL F +M+
Sbjct: 556 AYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLD 615
Query: 246 CGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRIN 305
G+ DEV L + VSACA + A+KEGQQIHA+ F +DL NAL+ +Y++C +I
Sbjct: 616 RGIRSDEVGLTNAVSACAGLQALKEGQQIHAQAC-VSGFSSDLPFQNALVTLYSRCGKIE 675
Query: 306 EARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGE 365
E+ + F+ D I WNAL++G Q+G
Sbjct: 676 ESYLAFEQTE-------------------------------AGDNIAWNALVSGFQQSGN 735
Query: 366 NEEALILFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSD 425
NEEAL +F + RE + ++TFG+ + A + A+++ G+Q H+ + K G+ DS+
Sbjct: 736 NEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGY------DSE 795
Query: 426 VFVGNSLIDMYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVFCKMLE 485
V N+LI MY KCGS+ + + F + K+ VSWNA+I Y+++GFG++AL+ F +M+
Sbjct: 796 TEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIH 855
Query: 486 SGEAPDHVTMIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGRAGYLE 545
S P+HVT++GVL ACSH GL+D+G YF SM +++GL P +HY C+VD+L RAG L
Sbjct: 856 SNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLS 915
Query: 546 EAKNLIEEMSMQPDAIVWGSLLAACKVHRNIQLGEYVVKKLLEVDPENSGPYVLLSNMYA 605
AK I+EM ++PDA+VW +LL+AC VH+N+++GE+ LLE++PE+S YVLLSN+YA
Sbjct: 916 RAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYA 974
Query: 606 ENRDWKNVVRVRKLMRQRGVVKQPGCSWIEIQGELNVFMVKDKRHARKKEIYMVLRTILQ 665
++ W R+ M+++GV K+PG SWIE++ ++ F V D+ H EI+ + + +
Sbjct: 976 VSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTK 974
Query: 666 QMKQAGYV 674
+ + GYV
Sbjct: 1036 RASEIGYV 974
HSP 2 Score: 246.9 bits (629), Expect = 6.4e-64
Identity = 167/565 (29.56%), Postives = 260/565 (46.02%), Query Frame = 1
Query: 5 GLVKHLKGDLLFLDSSPFSKLLNQCARSRSARDT-SRVHACIIKSPFASETFIQNRLIDV 64
GL + + + + FS +L C A D ++HA I+ T + N LID+
Sbjct: 172 GLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDL 231
Query: 65 YGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMI 124
Y + G VD+AR++FD + + D SW +MI
Sbjct: 232 YSRNGFVDLARRVFDGLRLK-------------------------------DHSSWVAMI 291
Query: 125 SGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYL 184
SG ++ EA+ F M+ G + Y+F S LSAC ++ L++G Q+H LV + +
Sbjct: 292 SGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFS 351
Query: 185 SDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEM 244
SD Y+ +ALV +Y G + A+ +F M+ R V++N+LI Q G ++A+++F M
Sbjct: 352 SDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRM 411
Query: 245 IKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNR 304
G+EPD TLAS+V AC+ + GQQ+HA K N+ I G ALL++YAKC
Sbjct: 412 HLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEG-ALLNLYAKC-- 471
Query: 305 INEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQN 364
+ ++ A F V++V+ WN ++
Sbjct: 472 -----------------------------ADIETALDYFLETEVENVVLWNVMLVAYGLL 531
Query: 365 GENEEALILFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGED 424
+ + +FR ++ E + P YT+ ++L C L DL+LG Q HS ++K F+
Sbjct: 532 DDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQL----- 591
Query: 425 SDVFVGNSLIDMYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVFCKM 484
+ +V + LIDMY K G ++ + KD VSW MI GY Q F +KAL F +M
Sbjct: 592 -NAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQM 651
Query: 485 LESGEAPDHVTMIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGRAGY 544
L+ G D V + + AC+ L EG+ + G +V L R G
Sbjct: 652 LDRGIRSDEVGLTNAVSACAGLQALKEGQ-QIHAQACVSGFSSDLPFQNALVTLYSRCGK 665
Query: 545 LEEAKNLIEEMSMQPDAIVWGSLLA 569
+EE+ L E + D I W +L++
Sbjct: 712 IEES-YLAFEQTEAGDNIAWNALVS 665
HSP 3 Score: 199.5 bits (506), Expect = 1.2e-49
Identity = 136/552 (24.64%), Postives = 257/552 (46.56%), Query Frame = 1
Query: 22 FSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKLFDRML 81
FS +L+ C + S ++H ++K F+S+T++ N L+ +Y G
Sbjct: 291 FSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLG------------- 350
Query: 82 ERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALVYFAQ 141
N+ S A HIF M Q D ++N++I+G Q G ++A+ F +
Sbjct: 351 --NLIS----------------AEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKR 410
Query: 142 MHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSKCGR 201
MH G + + S + AC+ L G Q+H+ + + S+ + AL+++Y+KC
Sbjct: 411 MHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCAD 470
Query: 202 VEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLASVVSA 261
+E A F E V + V WN ++ Y + + +IF +M + P++ T S++
Sbjct: 471 IETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKT 530
Query: 262 CATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRSVVS 321
C + ++ G+QIH++++K + F+ + + + L+DMYAK +++ A +D++
Sbjct: 531 CIRLGDLELGEQIHSQIIKTN-FQLNAYVCSVLIDMYAKLGKLDTA---WDIL------- 590
Query: 322 ETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESV 381
++ A KDV++W +IAG TQ +++AL FR + +
Sbjct: 591 -------------IRFAG--------KDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGI 650
Query: 382 WPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLIDMYMKCGS 441
N ++ACA L L+ G+Q H+ GF SD+ N+L+ +Y +CG
Sbjct: 651 RSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGF------SSDLPFQNALVTLYSRCGK 710
Query: 442 VENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVFCKMLESGEAPDHVTMIGVLCA 501
+E F+ D ++WNA++ G+ Q+G +AL VF +M G ++ T + A
Sbjct: 711 IEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKA 770
Query: 502 CSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGRAGYLEEAKNLIEEMSMQPDAI 561
S + +G+ +T + G + ++ + + G + +A+ E+S + + +
Sbjct: 771 ASETANMKQGKQVHAVIT-KTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTK-NEV 771
Query: 562 VWGSLLAACKVH 574
W +++ A H
Sbjct: 831 SWNAIINAYSKH 771
HSP 4 Score: 176.4 bits (446), Expect = 1.1e-42
Identity = 137/548 (25.00%), Postives = 238/548 (43.43%), Query Frame = 1
Query: 25 LLNQCARSRSARDTSR-VHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKLFDRMLER 84
LL C ++ + D R +H+ I+K S + +L D Y G + A K+FD M ER
Sbjct: 90 LLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPER 149
Query: 85 NIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALVYFAQMH 144
IF+WN MI E F +M
Sbjct: 150 TIFTWNK-------------------------------MIKELASRNLIGEVFGLFVRMV 209
Query: 145 GHGFLVNEYSFGSALSAC-AGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSKCGRV 204
NE +F L AC G + QIH+ + + + L+D+YS+ G V
Sbjct: 210 SENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFV 269
Query: 205 EYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLASVVSAC 264
+ A+ VFD + ++ SW ++I+ +N EA+++F +M G+ P +SV+SAC
Sbjct: 270 DLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSAC 329
Query: 265 ATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRSVVSE 324
I +++ G+Q+H V+K F +D + NAL+ +Y + +++S
Sbjct: 330 KKIESLEIGEQLHGLVLKLG-FSSDTYVCNALVSLY---------------FHLGNLIS- 389
Query: 325 TSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVW 384
A ++FSNM +D +T+N LI G +Q G E+A+ LF+ + + +
Sbjct: 390 ---------------AEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLE 449
Query: 385 PTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLIDMYMKCGSV 444
P T +L+ AC+ L G+Q H++ K GF S+ + +L+++Y KC +
Sbjct: 450 PDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFA------SNNKIEGALLNLYAKCADI 509
Query: 445 ENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVFCKMLESGEAPDHVTMIGVLCAC 504
E F ++ V WN M+V Y + +F +M P+ T +L C
Sbjct: 510 ETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTC 564
Query: 505 SHAGLLDEGRYYFRSMTAQHGLMPLKDHYTC--MVDLLGRAGYLEEAKNLIEEMSMQPDA 564
G L+ G + + + + Y C ++D+ + G L+ A +++ + + D
Sbjct: 570 IRLGDLELGEQIHSQIIKTNFQL---NAYVCSVLIDMYAKLGKLDTAWDILIRFAGK-DV 564
Query: 565 IVWGSLLA 569
+ W +++A
Sbjct: 630 VSWTTMIA 564
BLAST of Csa5G003610 vs. Swiss-Prot
Match:
PP320_ARATH (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana GN=DOT4 PE=2 SV=1)
HSP 1 Score: 430.6 bits (1106), Expect = 3.1e-119
Identity = 241/682 (35.34%), Postives = 372/682 (54.55%), Query Frame = 1
Query: 5 GLVKHLKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVY 64
GL K + + +DS FS + + RS ++H I+KS F + N L+ Y
Sbjct: 181 GLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFY 240
Query: 65 GKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMIS 124
K VD ARK+FD M ER++ SWNSII + +G + + +F +M ++S
Sbjct: 241 LKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQM----------LVS 300
Query: 125 GFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLS 184
G E D A + S + CA + + LG +HS+ ++ +
Sbjct: 301 GIE----IDLATIV-----------------SVFAGCADSRLISLGRAVHSIGVKACFSR 360
Query: 185 DVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMI 244
+ + L+DMYSKCG ++ A++VF EM+ RS VS+ S+I Y + G EA+K+F EM
Sbjct: 361 EDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEME 420
Query: 245 KCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRI 304
+ G+ PD T+ +V++ CA + EG+++H +K ++ D+ + NAL+DMYAKC +
Sbjct: 421 EEGISPDVYTVTAVLNCCARYRLLDEGKRVH-EWIKENDLGFDIFVSNALMDMYAKCGSM 480
Query: 305 NEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNG 364
EA ++F S M VKD+I+WN +I G ++N
Sbjct: 481 QEAELVF-------------------------------SEMRVKDIISWNTIIGGYSKNC 540
Query: 365 ENEEALILFRLLKRESVW-PTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGED 424
EAL LF LL E + P T +L ACA+L+ GR+ H +++++G+
Sbjct: 541 YANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYF------ 600
Query: 425 SDVFVGNSLIDMYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVFCKM 484
SD V NSL+DMY KCG++ +F + KD VSW MI GY +GFG +A+ +F +M
Sbjct: 601 SDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQM 660
Query: 485 LESGEAPDHVTMIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGRAGY 544
++G D ++ + +L ACSH+GL+DEG +F M + + P +HY C+VD+L R G
Sbjct: 661 RQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGD 720
Query: 545 LEEAKNLIEEMSMQPDAIVWGSLLAACKVHRNIQLGEYVVKKLLEVDPENSGPYVLLSNM 604
L +A IE M + PDA +WG+LL C++H +++L E V +K+ E++PEN+G YVL++N+
Sbjct: 721 LIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANI 780
Query: 605 YAENRDWKNVVRVRKLMRQRGVVKQPGCSWIEIQGELNVFMVKDKRHARKKEIYMVLRTI 664
YAE W+ V R+RK + QRG+ K PGCSWIEI+G +N+F+ D + + I LR +
Sbjct: 781 YAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKV 793
Query: 665 LQQMKQAGYVPYVGSNEFDEDE 686
+M + GY P D +E
Sbjct: 841 RARMIEEGYSPLTKYALIDAEE 793
HSP 2 Score: 243.0 bits (619), Expect = 9.3e-63
Identity = 155/495 (31.31%), Postives = 252/495 (50.91%), Query Frame = 1
Query: 80 MLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALVYF 139
+++ N+ S S++ +T G L +A +F+++ WN +++ + G F ++ F
Sbjct: 126 VIDSNLGSKLSLM--YTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLF 185
Query: 140 AQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSKC 199
+M G ++ Y+F + + L+ + G Q+H + +S + +G++LV Y K
Sbjct: 186 KKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKN 245
Query: 200 GRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLASVV 259
RV+ A+ VFDEMT R +SWNS+I Y NG ++ L +FV+M+ G+E D T+ SV
Sbjct: 246 QRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVF 305
Query: 260 SACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRSV 319
+ CA I G+ +H+ VK R D N LLDMY+KC ++ A+ +F M RSV
Sbjct: 306 AGCADSRLISLGRAVHSIGVKACFSREDRFC-NTLLDMYSKCGDLDSAKAVFREMSDRSV 365
Query: 320 VSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRE 379
VS TSM++GYA+ +AG EA+ LF ++ E
Sbjct: 366 VSYTSMIAGYAREG-----------------------LAG--------EAVKLFEEMEEE 425
Query: 380 SVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLIDMYMKC 439
+ P YT +LN CA L G++ H + ++ F D+FV N+L+DMY KC
Sbjct: 426 GISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGF------DIFVSNALMDMYAKC 485
Query: 440 GSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVFCKMLESGE-APDHVTMIGV 499
GS++ VF M KD +SWN +I GY++N + N+AL +F +LE +PD T+ V
Sbjct: 486 GSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACV 545
Query: 500 LCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGRAGYLEEAKNLIEEMSMQP 559
L AC+ D+GR ++G + +VD+ + G L A L ++++ +
Sbjct: 546 LPACASLSAFDKGR-EIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASK- 578
Query: 560 DAIVWGSLLAACKVH 574
D + W ++A +H
Sbjct: 606 DLVSWTVMIAGYGMH 578
HSP 3 Score: 134.4 bits (337), Expect = 4.7e-30
Identity = 107/390 (27.44%), Postives = 180/390 (46.15%), Query Frame = 1
Query: 215 RSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLASVVSACATISAIKEGQQI 274
RS N+ + + ++G ++ A+K+ K ++P TL SV+ CA ++K+G+++
Sbjct: 59 RSVTDANTQLRRFCESGNLENAVKLLCVSGKWDIDPR--TLCSVLQLCADSKSLKDGKEV 118
Query: 275 HARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRSVVSETSMVSGYAKASK 334
++ + F D LG+ L MY C + EA +FD +
Sbjct: 119 D-NFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFD---------------------E 178
Query: 335 VKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVWPTHYTFGNLLNA 394
VK+ + +F WN L+ ++G+ ++ LF+ + V YTF + +
Sbjct: 179 VKIEKALF----------WNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKS 238
Query: 395 CANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLE 454
++L + G Q H +LK GF GE + VGNSL+ Y+K V++ +VF M E
Sbjct: 239 FSSLRSVHGGEQLHGFILKSGF----GERNS--VGNSLVAFYLKNQRVDSARKVFDEMTE 298
Query: 455 KDCVSWNAMIVGYAQNGFGNKALEVFCKMLESGEAPDHVTMIGVLCACSHAGLLDEGRYY 514
+D +SWN++I GY NG K L VF +ML SG D T++ V C+ + L+ GR
Sbjct: 299 RDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGR-- 358
Query: 515 FRSMTAQHGL-----MPLKDHY-TCMVDLLGRAGYLEEAKNLIEEMSMQPDAIVWGSLLA 574
A H + +D + ++D+ + G L+ AK + EMS + + S++A
Sbjct: 359 -----AVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMS-DRSVVSYTSMIA 397
Query: 575 ACKVHRNIQLGEYVVKKLLEVDPENSGPYV 599
+ L VK E++ E P V
Sbjct: 419 G---YAREGLAGEAVKLFEEMEEEGISPDV 397
BLAST of Csa5G003610 vs. TrEMBL
Match:
A0A0A0KJ63_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G003610 PE=4 SV=1)
HSP 1 Score: 1396.7 bits (3614), Expect = 0.0e+00
Identity = 687/687 (100.00%), Postives = 687/687 (100.00%), Query Frame = 1
Query: 1 MAGNGLVKHLKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRL 60
MAGNGLVKHLKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRL
Sbjct: 1 MAGNGLVKHLKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRL 60
Query: 61 IDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN 120
IDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN
Sbjct: 61 IDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN 120
Query: 121 SMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRS 180
SMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRS
Sbjct: 121 SMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRS 180
Query: 181 NYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIF 240
NYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIF
Sbjct: 181 NYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIF 240
Query: 241 VEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK 300
VEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK
Sbjct: 241 VEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK 300
Query: 301 CNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGC 360
CNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGC
Sbjct: 301 CNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGC 360
Query: 361 TQNGENEEALILFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQY 420
TQNGENEEALILFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQY
Sbjct: 361 TQNGENEEALILFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQY 420
Query: 421 GEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVF 480
GEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVF
Sbjct: 421 GEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVF 480
Query: 481 CKMLESGEAPDHVTMIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGR 540
CKMLESGEAPDHVTMIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGR
Sbjct: 481 CKMLESGEAPDHVTMIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGR 540
Query: 541 AGYLEEAKNLIEEMSMQPDAIVWGSLLAACKVHRNIQLGEYVVKKLLEVDPENSGPYVLL 600
AGYLEEAKNLIEEMSMQPDAIVWGSLLAACKVHRNIQLGEYVVKKLLEVDPENSGPYVLL
Sbjct: 541 AGYLEEAKNLIEEMSMQPDAIVWGSLLAACKVHRNIQLGEYVVKKLLEVDPENSGPYVLL 600
Query: 601 SNMYAENRDWKNVVRVRKLMRQRGVVKQPGCSWIEIQGELNVFMVKDKRHARKKEIYMVL 660
SNMYAENRDWKNVVRVRKLMRQRGVVKQPGCSWIEIQGELNVFMVKDKRHARKKEIYMVL
Sbjct: 601 SNMYAENRDWKNVVRVRKLMRQRGVVKQPGCSWIEIQGELNVFMVKDKRHARKKEIYMVL 660
Query: 661 RTILQQMKQAGYVPYVGSNEFDEDEEQ 688
RTILQQMKQAGYVPYVGSNEFDEDEEQ
Sbjct: 661 RTILQQMKQAGYVPYVGSNEFDEDEEQ 687
BLAST of Csa5G003610 vs. TrEMBL
Match:
A0A061E4Z3_THECC (Pentatricopeptide repeat (PPR) superfamily protein OS=Theobroma cacao GN=TCM_009576 PE=4 SV=1)
HSP 1 Score: 1017.7 bits (2630), Expect = 6.7e-294
Identity = 491/687 (71.47%), Postives = 585/687 (85.15%), Query Frame = 1
Query: 1 MAGNGLVKHLKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRL 60
MA GL+K + GDL DSSPF+KLL+ +S+S D R+HA I KS FASETFI NRL
Sbjct: 1 MAKRGLLKQIVGDLSLPDSSPFAKLLDSYIQSKSLLDVHRLHARITKSNFASETFILNRL 60
Query: 61 IDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN 120
ID YGKCG ++ ARK+FDRM +RNIFSWNS I A TK GF+D+A IF M + DQCSWN
Sbjct: 61 IDAYGKCGSLEDARKVFDRMPQRNIFSWNSAITALTKFGFVDEAARIFGSMSEHDQCSWN 120
Query: 121 SMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRS 180
S+ISGF Q +F+EAL YF +MH F +NEYSFGSALSAC+GL+D+K+G+QIH+L+ ++
Sbjct: 121 SIISGFAQQDKFEEALYYFVRMHREDFALNEYSFGSALSACSGLKDMKMGTQIHALMTKT 180
Query: 181 NYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIF 240
+LSDVYMGSALVDMY KCG V AQ FD+M R+RVSWNSLITCYEQNGP AL++F
Sbjct: 181 LFLSDVYMGSALVDMYGKCGSVCCAQRAFDDMNQRNRVSWNSLITCYEQNGPAGVALEVF 240
Query: 241 VEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK 300
+ M+ CG+EPDEVTLASVVSACA++SAIKEG+QIHARVVKC + R+DL+L NAL+DMYAK
Sbjct: 241 LRMMDCGIEPDEVTLASVVSACASLSAIKEGKQIHARVVKCIKLRDDLVLCNALVDMYAK 300
Query: 301 CNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGC 360
C+RINEAR +FD MP+R+VVSETSMVSGYAKA+ VK AR MF MM +++++WNALIAG
Sbjct: 301 CSRINEARCVFDRMPVRNVVSETSMVSGYAKAASVKTARLMFMKMMERNIVSWNALIAGY 360
Query: 361 TQNGENEEALILFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQY 420
TQNGE+EEAL LFRLLKRESV PTHYTFGNLLNACANLADLQLGRQAH+HVLKHGFRFQ+
Sbjct: 361 TQNGEDEEALRLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVLKHGFRFQF 420
Query: 421 GEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVF 480
GEDSD+FVGNSLIDMYMKCGSVE+G +VF++M+E+D VSWNAMIVGYAQNG+GNKALE+F
Sbjct: 421 GEDSDIFVGNSLIDMYMKCGSVEDGDQVFKNMMERDWVSWNAMIVGYAQNGYGNKALELF 480
Query: 481 CKMLESGEAPDHVTMIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGR 540
ML SGE PDHVTMIGVLCACSHAGL++EGR++F SM+++HGL+PLKDHYTCMVDLLGR
Sbjct: 481 KNMLVSGEKPDHVTMIGVLCACSHAGLVEEGRHHFSSMSSEHGLVPLKDHYTCMVDLLGR 540
Query: 541 AGYLEEAKNLIEEMSMQPDAIVWGSLLAACKVHRNIQLGEYVVKKLLEVDPENSGPYVLL 600
AG L EAKNLIE M M+PDA+VWGSLL ACK+HR+I LG+YV +KLLE+DP NSGPYVLL
Sbjct: 541 AGCLNEAKNLIETMPMKPDAVVWGSLLGACKIHRDITLGKYVAEKLLEIDPSNSGPYVLL 600
Query: 601 SNMYAENRDWKNVVRVRKLMRQRGVVKQPGCSWIEIQGELNVFMVKDKRHARKKEIYMVL 660
SNMYAE W +VVRVRKLM++RGV+KQPGCSWIEIQG ++VFMVKDKRH ++KEIY VL
Sbjct: 601 SNMYAELGKWGDVVRVRKLMKKRGVIKQPGCSWIEIQGHVSVFMVKDKRHPQRKEIYSVL 660
Query: 661 RTILQQMKQAGYVPYVGSNEFDEDEEQ 688
+++QMKQAGY+P E E+E +
Sbjct: 661 NALIKQMKQAGYLPDAADQEAYEEESE 687
BLAST of Csa5G003610 vs. TrEMBL
Match:
V4SCT8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10000448mg PE=4 SV=1)
HSP 1 Score: 1013.1 bits (2618), Expect = 1.6e-292
Identity = 489/685 (71.39%), Postives = 570/685 (83.21%), Query Frame = 1
Query: 1 MAGNGLVKHLKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRL 60
MA VK + GDL FLDSSPF+KLL+ C RS+S DT RVHA IIKS FASE FIQNRL
Sbjct: 1 MATQRSVKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRL 60
Query: 61 IDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN 120
IDVY KCGC+ ARK+FD+M +N+F+WNSII K GF+DDA +F MP+ DQCSWN
Sbjct: 61 IDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWN 120
Query: 121 SMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRS 180
SM+SGF QH RF EAL YF +MH F +NEYSFGSALSACAG D K+G+Q+H+L+ +S
Sbjct: 121 SMVSGFAQHDRFSEALGYFVKMHSENFALNEYSFGSALSACAGSVDFKMGTQVHALLSKS 180
Query: 181 NYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIF 240
Y SDVYMGSAL+DMY KCGRV A+ VFD M R+ VSWNSLITCYEQNGP +AL++F
Sbjct: 181 RYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVF 240
Query: 241 VEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK 300
V M+ G+EPDEVTLASVVSACA+++A KEG QIHAR+++C++ RNDL+LGNAL+DMYAK
Sbjct: 241 VRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAK 300
Query: 301 CNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGC 360
C ++NEAR +FD MPIR+VVSETSMVSGYAKAS VK AR MF+ M+ ++V++WNALIAG
Sbjct: 301 CGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGY 360
Query: 361 TQNGENEEALILFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQY 420
TQNGENEEAL LFRLLKRESV PTHYTFGNLLNACANLADLQLGRQAH+HV+KHG RF
Sbjct: 361 TQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLS 420
Query: 421 GEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVF 480
GE+SD+FVGNSLIDMYMKCGSVE GCR+F+ M+E+D VSWNAMIVG AQNG+G +AL +F
Sbjct: 421 GEESDIFVGNSLIDMYMKCGSVEEGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLF 480
Query: 481 CKMLESGEAPDHVTMIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGR 540
KML GE PDHVTMIGVLCACSHAGL++EGR YF SM+ +HGL PLKDHYTCMVDLLGR
Sbjct: 481 KKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGR 540
Query: 541 AGYLEEAKNLIEEMSMQPDAIVWGSLLAACKVHRNIQLGEYVVKKLLEVDPENSGPYVLL 600
AG L+EAK LIE M MQPDA++WGSLLAACKVHRNI LGEYV KKLLE++P NSGPYVLL
Sbjct: 541 AGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLL 600
Query: 601 SNMYAENRDWKNVVRVRKLMRQRGVVKQPGCSWIEIQGELNVFMVKDKRHARKKEIYMVL 660
SNMYAE W VVRVRKLMR+RGVVKQPGCSWIEI G +NVFMVKDKRH KEIY+VL
Sbjct: 601 SNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVL 660
Query: 661 RTILQQMKQAGYVPYVGSNEFDEDE 686
+ + ++MK+ GYVP +E E++
Sbjct: 661 KMLTREMKRVGYVPNASDDEAYEEQ 685
BLAST of Csa5G003610 vs. TrEMBL
Match:
A0A067E6C1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g005265mg PE=4 SV=1)
HSP 1 Score: 1011.5 bits (2614), Expect = 4.8e-292
Identity = 488/685 (71.24%), Postives = 571/685 (83.36%), Query Frame = 1
Query: 1 MAGNGLVKHLKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRL 60
MA VK + GDL FLDSSPF+KLL+ C RS+S DT RVHA IIKS FASE FIQNRL
Sbjct: 1 MATQRSVKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRL 60
Query: 61 IDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN 120
IDVY KCGC+ ARK+FD+M +N+F+WNSII K GF+DDA +F MP+ DQCSWN
Sbjct: 61 IDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWN 120
Query: 121 SMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRS 180
SM+SGF QH RF EAL YF +MH F ++EYSFGSALSACAG D K+G+Q+H+L+ +S
Sbjct: 121 SMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKS 180
Query: 181 NYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIF 240
Y SDVYMGSAL+DMY KCGRV A+ VFD M R+ VSWNSLITCYEQNGP +AL++F
Sbjct: 181 RYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVF 240
Query: 241 VEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK 300
V M+ G+EPDEVTLASVVSACA+++A KEG QIHAR+++C++ RNDL+LGNAL+DMYAK
Sbjct: 241 VRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAK 300
Query: 301 CNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGC 360
C ++NEAR +FD MPIR+VVSETSMVSGYAKAS VK AR MF+ M+ ++V++WNALIAG
Sbjct: 301 CGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGY 360
Query: 361 TQNGENEEALILFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQY 420
TQNGENEEAL LFRLLKRESV PTHYTFGNLLNACANLADLQLGRQAH+HV+KHG RF
Sbjct: 361 TQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLS 420
Query: 421 GEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVF 480
GE+SD+FVGNSLIDMYMKCGSVE+GCR+F+ M+E+D VSWNAMIVG AQNG+G +AL +F
Sbjct: 421 GEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLF 480
Query: 481 CKMLESGEAPDHVTMIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGR 540
KML GE PDHVTMIGVLCACSHAGL++EGR YF SM+ +HGL PLKDHYTCMVDLLGR
Sbjct: 481 KKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGR 540
Query: 541 AGYLEEAKNLIEEMSMQPDAIVWGSLLAACKVHRNIQLGEYVVKKLLEVDPENSGPYVLL 600
AG L+EAK LIE M MQPDA++WGSLLAACKVHRNI LGEYV KKLLE++P NSGPYVLL
Sbjct: 541 AGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLL 600
Query: 601 SNMYAENRDWKNVVRVRKLMRQRGVVKQPGCSWIEIQGELNVFMVKDKRHARKKEIYMVL 660
SNMYAE W VVRVRKLMR+RGVVKQPGCSWIEI G +NVFMVKDKRH KEIY+VL
Sbjct: 601 SNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVL 660
Query: 661 RTILQQMKQAGYVPYVGSNEFDEDE 686
+ + ++MK+ GYVP +E E++
Sbjct: 661 KMLTREMKRVGYVPNASDDEAYEEQ 685
BLAST of Csa5G003610 vs. TrEMBL
Match:
G7JC33_MEDTR (PPR containing plant-like protein OS=Medicago truncatula GN=MTR_3g096420 PE=4 SV=1)
HSP 1 Score: 999.2 bits (2582), Expect = 2.5e-288
Identity = 479/685 (69.93%), Postives = 576/685 (84.09%), Query Frame = 1
Query: 1 MAGNGLVKHLKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRL 60
MA +GLV+ + GDL FLDSSPF+KLL+ C +S+S + VHA IIK+ F+SE FIQNRL
Sbjct: 1 MAKHGLVRKVVGDLSFLDSSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRL 60
Query: 61 IDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN 120
+DVYGKCG ++ ARK+FD M +RN FSWN+++ A TK G LD+A+++F+ MP+ DQCSWN
Sbjct: 61 VDVYGKCGFLEDARKVFDHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWN 120
Query: 121 SMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRS 180
+M+SGF Q RF+EAL + MH F++NEYSFGSALSACAGL DL +G QIH L+ +S
Sbjct: 121 AMVSGFAQRDRFEEALRFVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKS 180
Query: 181 NYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIF 240
Y DVYMGSALVDMYSKC V AQ FD+M VR+ VSWNSLITCYEQNGP +AL++F
Sbjct: 181 RYSLDVYMGSALVDMYSKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVF 240
Query: 241 VEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK 300
V M+ CG+EPDE+TLASV SACA++SAI+EG QIHARV+K D++RNDL+LGNAL+DMYAK
Sbjct: 241 VRMMNCGIEPDEITLASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAK 300
Query: 301 CNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGC 360
C R+NEAR++FD MP+R VVSETSMVSGYAKAS VK AR MFSNMM ++V++WNALIAG
Sbjct: 301 CRRVNEARLVFDRMPLRDVVSETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGY 360
Query: 361 TQNGENEEALILFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQY 420
TQNGENEEA+ LF LLKRES+WPTHYTFGNLLNACANLADL+LGRQAH+H+LKHGF F+
Sbjct: 361 TQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKS 420
Query: 421 GEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVF 480
GEDSD+FVGNSLIDMYMKCG VE+G VF+ MLE+D VSWNAMIVGYAQNG+G +ALE+F
Sbjct: 421 GEDSDIFVGNSLIDMYMKCGLVEDGRLVFERMLERDNVSWNAMIVGYAQNGYGTEALEIF 480
Query: 481 CKMLESGEAPDHVTMIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGR 540
+ML SGE PDHVTMIGVL ACSHAGL++EGR YF+SMT +HGL+P+KDHYTCMVDLLGR
Sbjct: 481 REMLVSGERPDHVTMIGVLSACSHAGLVEEGRCYFQSMTIEHGLVPVKDHYTCMVDLLGR 540
Query: 541 AGYLEEAKNLIEEMSMQPDAIVWGSLLAACKVHRNIQLGEYVVKKLLEVDPENSGPYVLL 600
AG L+EA NLI+ M M+PDA+VWGSLLAACKVH NI LG+YV ++LLE+DP NSGPYVLL
Sbjct: 541 AGCLDEANNLIQTMPMEPDAVVWGSLLAACKVHGNITLGKYVAERLLEIDPLNSGPYVLL 600
Query: 601 SNMYAENRDWKNVVRVRKLMRQRGVVKQPGCSWIEIQGELNVFMVKDKRHARKKEIYMVL 660
SNMYAE WK+VVRVRK MRQ GV+KQPGCSWI IQ L+VFMVKDKRH KK+IY++L
Sbjct: 601 SNMYAELGRWKDVVRVRKQMRQMGVIKQPGCSWISIQSHLHVFMVKDKRHPHKKDIYLIL 660
Query: 661 RTILQQMKQAGYVPYVGSNEFDEDE 686
+ + +QMK+ GYVP +E E+E
Sbjct: 661 KILTEQMKRVGYVPEADDDEPYEEE 685
BLAST of Csa5G003610 vs. TAIR10
Match:
AT2G13600.1 (AT2G13600.1 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 913.7 bits (2360), Expect = 6.9e-266
Identity = 438/669 (65.47%), Postives = 539/669 (80.57%), Query Frame = 1
Query: 16 FLDSSPFSKLLNQCARSR-SARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVAR 75
F DSSPF+KLL+ C +S+ SA VHA +IKS F++E FIQNRLID Y KCG ++ R
Sbjct: 16 FTDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGR 75
Query: 76 KLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDE 135
++FD+M +RNI++WNS++ TK GFLD+A +F MP+ DQC+WNSM+SGF QH R +E
Sbjct: 76 QVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEE 135
Query: 136 ALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVD 195
AL YFA MH GF++NEYSF S LSAC+GL D+ G Q+HSL+ +S +LSDVY+GSALVD
Sbjct: 136 ALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVD 195
Query: 196 MYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVT 255
MYSKCG V AQ VFDEM R+ VSWNSLITC+EQNGP EAL +F M++ VEPDEVT
Sbjct: 196 MYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVT 255
Query: 256 LASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMM 315
LASV+SACA++SAIK GQ++H RVVK D+ RND+IL NA +DMYAKC+RI EAR IFD M
Sbjct: 256 LASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSM 315
Query: 316 PIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFR 375
PIR+V++ETSM+SGYA A+ K AR MF+ M ++V++WNALIAG TQNGENEEAL LF
Sbjct: 316 PIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFC 375
Query: 376 LLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLID 435
LLKRESV PTHY+F N+L ACA+LA+L LG QAH HVLKHGF+FQ GE+ D+FVGNSLID
Sbjct: 376 LLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLID 435
Query: 436 MYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVFCKMLESGEAPDHVT 495
MY+KCG VE G VF+ M+E+DCVSWNAMI+G+AQNG+GN+ALE+F +MLESGE PDH+T
Sbjct: 436 MYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHIT 495
Query: 496 MIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGRAGYLEEAKNLIEEM 555
MIGVL AC HAG ++EGR+YF SMT G+ PL+DHYTCMVDLLGRAG+LEEAK++IEEM
Sbjct: 496 MIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEM 555
Query: 556 SMQPDAIVWGSLLAACKVHRNIQLGEYVVKKLLEVDPENSGPYVLLSNMYAENRDWKNVV 615
MQPD+++WGSLLAACKVHRNI LG+YV +KLLEV+P NSGPYVLLSNMYAE W++V+
Sbjct: 556 PMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVM 615
Query: 616 RVRKLMRQRGVVKQPGCSWIEIQGELNVFMVKDKRHARKKEIYMVLRTILQQMKQAGYVP 675
VRK MR+ GV KQPGCSWI+IQG +VFMVKDK H RKK+I+ +L ++ +M+
Sbjct: 616 NVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMRPEQDHT 675
Query: 676 YVGSNEFDE 684
+GS +E
Sbjct: 676 EIGSLSSEE 684
BLAST of Csa5G003610 vs. TAIR10
Match:
AT4G02750.1 (AT4G02750.1 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 454.5 bits (1168), Expect = 1.1e-127
Identity = 252/630 (40.00%), Postives = 377/630 (59.84%), Query Frame = 1
Query: 58 NRLIDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQC 117
N +I Y + G ++ARKLFD M ER++ SWN +I + ++ L A +FE MP+ D C
Sbjct: 99 NGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVC 158
Query: 118 SWNSMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLV 177
SWN+M+SG+ Q+G D+A F +M N+ S+ + LSA +Q+ K+
Sbjct: 159 SWNTMLSGYAQNGCVDDARSVFDRMPEK----NDVSWNALLSAY--VQNSKMEEACMLFK 218
Query: 178 YRSNYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEAL 237
R N+ + + L+ + K ++ A+ FD M VR VSWN++IT Y Q+G +DEA
Sbjct: 219 SRENWA--LVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEAR 278
Query: 238 KIFVEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDM 297
++F E D T ++VS ++E +++ ++ + +E + NA+L
Sbjct: 279 QLFDE----SPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNE-----VSWNAMLAG 338
Query: 298 YAKCNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALI 357
Y + R+ A+ +FD+MP R+V + +M++GYA+ K+ A+ +F M +D ++W A+I
Sbjct: 339 YVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMI 398
Query: 358 AGCTQNGENEEALILFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFR 417
AG +Q+G + EAL LF ++RE +F + L+ CA++ L+LG+Q H ++K G+
Sbjct: 399 AGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGY- 458
Query: 418 FQYGEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKAL 477
++ FVGN+L+ MY KCGS+E +F+ M KD VSWN MI GY+++GFG AL
Sbjct: 459 -----ETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVAL 518
Query: 478 EVFCKMLESGEAPDHVTMIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDL 537
F M G PD TM+ VL ACSH GL+D+GR YF +MT +G+MP HY CMVDL
Sbjct: 519 RFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDL 578
Query: 538 LGRAGYLEEAKNLIEEMSMQPDAIVWGSLLAACKVHRNIQLGEYVVKKLLEVDPENSGPY 597
LGRAG LE+A NL++ M +PDA +WG+LL A +VH N +L E K+ ++PENSG Y
Sbjct: 579 LGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMY 638
Query: 598 VLLSNMYAENRDWKNVVRVRKLMRQRGVVKQPGCSWIEIQGELNVFMVKDKRHARKKEIY 657
VLLSN+YA + W +V ++R MR +GV K PG SWIEIQ + + F V D+ H K EI+
Sbjct: 639 VLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIF 698
Query: 658 MVLRTILQQMKQAGYVPYVGSNEFDEDEEQ 688
L + +MK+AGYV D +EE+
Sbjct: 699 AFLEELDLRMKKAGYVSKTSVVLHDVEEEE 705
HSP 2 Score: 134.0 bits (336), Expect = 3.4e-31
Identity = 94/339 (27.73%), Postives = 164/339 (48.38%), Query Frame = 1
Query: 51 ASETFIQNRLIDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEK 110
A++T IQ KCG D+ WN I ++ ++G ++A+ +F++
Sbjct: 43 ATQTQIQKSQTKPLLKCGDSDIKE-------------WNVAISSYMRTGRCNEALRVFKR 102
Query: 111 MPQVDQCSWNSMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLG 170
MP+ S+N MISG+ ++G F+ A F +M + S+ + ++L
Sbjct: 103 MPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLV----SWNVMIKGYVRNRNLGKA 162
Query: 171 SQIHSLVYRSNYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQN 230
++ ++ DV + ++ Y++ G V+ A+SVFD M ++ VSWN+L++ Y QN
Sbjct: 163 RELFEIMPER----DVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQN 222
Query: 231 GPVDEALKIFVEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLIL 290
++EA +F A V C +K+ + + AR D++
Sbjct: 223 SKMEEACMLF---------KSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVS 282
Query: 291 GNALLDMYAKCNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDV 350
N ++ YA+ +I+EAR +FD P++ V + T+MVSGY + V+ AR +F M ++
Sbjct: 283 WNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNE 342
Query: 351 ITWNALIAGCTQNGENEEALILFRLL--KRESVWPTHYT 388
++WNA++AG Q E A LF ++ + S W T T
Sbjct: 343 VSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMIT 351
HSP 3 Score: 117.5 bits (293), Expect = 3.3e-26
Identity = 97/350 (27.71%), Postives = 163/350 (46.57%), Query Frame = 1
Query: 220 WNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLASVVSACATISA-IKEGQQIHARV 279
WN I+ Y + G +EAL++F M + S VS IS ++ G+ AR
Sbjct: 67 WNVAISSYMRTGRCNEALRVFKRMPRW----------SSVSYNGMISGYLRNGEFELARK 126
Query: 280 VKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVA 339
+ + DL+ N ++ Y + + +AR +F++MP R V S +M+SGYA+ V A
Sbjct: 127 LFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDA 186
Query: 340 RYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVWPTHYTFGNLLNACANL 399
R +F M K+ ++WNAL++ QN + EEA +LF+ RE+ W ++ LL
Sbjct: 187 RSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFK--SREN-WAL-VSWNCLLGGFVKK 246
Query: 400 ADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLEKDCV 459
+ RQ F DV N++I Y + G ++ ++F +D
Sbjct: 247 KKIVEARQF----------FDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVF 306
Query: 460 SWNAMIVGYAQNGFGNKALEVFCKMLESGEAPDHVTMIGVLCACSHAGLLDEGRYYFRSM 519
+W AM+ GY QN +A E+F KM E E V+ +L ++ + F M
Sbjct: 307 TWTAMVSGYIQNRMVEEARELFDKMPERNE----VSWNAMLAGYVQGERMEMAKELFDVM 366
Query: 520 TAQHGLMPLKDHYTCMVDLLGRAGYLEEAKNLIEEMSMQPDAIVWGSLLA 569
++ + M+ + G + EAKNL ++M + D + W +++A
Sbjct: 367 PCRN-----VSTWNTMITGYAQCGKISEAKNLFDKMPKR-DPVSWAAMIA 382
HSP 4 Score: 94.0 bits (232), Expect = 3.9e-19
Identity = 90/371 (24.26%), Postives = 160/371 (43.13%), Query Frame = 1
Query: 184 SDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEM 243
SD+ + + Y + GR A VF M S VS+N +I+ Y +NG + A K+F EM
Sbjct: 62 SDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEM 121
Query: 244 IKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNR 303
E D V+ ++ + + +++ + + D+ N +L YA+
Sbjct: 122 ----PERDLVSWNVMIKGYVRNRNLGKARELFEIMPE-----RDVCSWNTMLSGYAQNGC 181
Query: 304 INEARIIFDMMPIRSVVSETSMVS-------------------------------GYAKA 363
+++AR +FD MP ++ VS +++S G+ K
Sbjct: 182 VDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKK 241
Query: 364 SKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVWPTHYTFGNLL 423
K+ AR F +M V+DV++WN +I G Q+G+ +EA LF ES +T+ ++
Sbjct: 242 KKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLF----DESPVQDVFTWTAMV 301
Query: 424 NACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLIDMYMKCGSVENGCRVFQHM 483
+ ++ R+ F + + N+++ Y++ +E +F M
Sbjct: 302 SGYIQNRMVEEAREL----------FDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVM 361
Query: 484 LEKDCVSWNAMIVGYAQNGFGNKALEVFCKMLESGEAPDHVTMIGVLCACSHAGLLDEGR 524
++ +WN MI GYAQ G ++A +F KM + D V+ ++ S +G E
Sbjct: 362 PCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKR----DPVSWAAMIAGYSQSGHSFEAL 405
HSP 5 Score: 74.3 bits (181), Expect = 3.2e-13
Identity = 62/243 (25.51%), Postives = 107/243 (44.03%), Query Frame = 1
Query: 17 LDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKL 76
L+ S FS L+ CA + ++H ++K + + F+ N L+ +Y KCG ++ A L
Sbjct: 407 LNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDL 466
Query: 77 FDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMP----QVDQCSWNSMISGFEQHGRF 136
F M ++I SWN++I +++ GF + A+ FE M + D + +++S G
Sbjct: 467 FKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLV 526
Query: 137 DEALVYFAQM-HGHGFLVN--EYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMG 196
D+ YF M +G + N Y+ L AGL + H+L+ + D +
Sbjct: 527 DKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLE-----DAHNLMKNMPFEPDAAIW 586
Query: 197 SALVDMYSKCGRVEYAQSVFDE---MTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKC 250
L+ G E A++ D+ M + + L Y +G + K+ V M
Sbjct: 587 GTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDK 644
BLAST of Csa5G003610 vs. TAIR10
Match:
AT4G13650.1 (AT4G13650.1 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 431.8 bits (1109), Expect = 7.9e-121
Identity = 239/668 (35.78%), Postives = 368/668 (55.09%), Query Frame = 1
Query: 6 LVKHLKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYG 65
L K + D L DS+ + L+ C+ + ++HA K FAS I+ L+++Y
Sbjct: 376 LFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYA 435
Query: 66 KCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISG 125
KC ++ A F N+ WN G LDD + F
Sbjct: 436 KCADIETALDYFLETEVENVVLWN---VMLVAYGLLDDLRNSFR---------------- 495
Query: 126 FEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSD 185
F QM + N+Y++ S L C L DL+LG QIHS + ++N+ +
Sbjct: 496 ------------IFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLN 555
Query: 186 VYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIK 245
Y+ S L+DMY+K G+++ A + + VSW ++I Y Q D+AL F +M+
Sbjct: 556 AYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLD 615
Query: 246 CGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRIN 305
G+ DEV L + VSACA + A+KEGQQIHA+ F +DL NAL+ +Y++C +I
Sbjct: 616 RGIRSDEVGLTNAVSACAGLQALKEGQQIHAQAC-VSGFSSDLPFQNALVTLYSRCGKIE 675
Query: 306 EARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGE 365
E+ + F+ D I WNAL++G Q+G
Sbjct: 676 ESYLAFEQTE-------------------------------AGDNIAWNALVSGFQQSGN 735
Query: 366 NEEALILFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSD 425
NEEAL +F + RE + ++TFG+ + A + A+++ G+Q H+ + K G+ DS+
Sbjct: 736 NEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGY------DSE 795
Query: 426 VFVGNSLIDMYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVFCKMLE 485
V N+LI MY KCGS+ + + F + K+ VSWNA+I Y+++GFG++AL+ F +M+
Sbjct: 796 TEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIH 855
Query: 486 SGEAPDHVTMIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGRAGYLE 545
S P+HVT++GVL ACSH GL+D+G YF SM +++GL P +HY C+VD+L RAG L
Sbjct: 856 SNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLS 915
Query: 546 EAKNLIEEMSMQPDAIVWGSLLAACKVHRNIQLGEYVVKKLLEVDPENSGPYVLLSNMYA 605
AK I+EM ++PDA+VW +LL+AC VH+N+++GE+ LLE++PE+S YVLLSN+YA
Sbjct: 916 RAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYA 974
Query: 606 ENRDWKNVVRVRKLMRQRGVVKQPGCSWIEIQGELNVFMVKDKRHARKKEIYMVLRTILQ 665
++ W R+ M+++GV K+PG SWIE++ ++ F V D+ H EI+ + + +
Sbjct: 976 VSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTK 974
Query: 666 QMKQAGYV 674
+ + GYV
Sbjct: 1036 RASEIGYV 974
HSP 2 Score: 246.9 bits (629), Expect = 3.6e-65
Identity = 167/565 (29.56%), Postives = 260/565 (46.02%), Query Frame = 1
Query: 5 GLVKHLKGDLLFLDSSPFSKLLNQCARSRSARDT-SRVHACIIKSPFASETFIQNRLIDV 64
GL + + + + FS +L C A D ++HA I+ T + N LID+
Sbjct: 172 GLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDL 231
Query: 65 YGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMI 124
Y + G VD+AR++FD + + D SW +MI
Sbjct: 232 YSRNGFVDLARRVFDGLRLK-------------------------------DHSSWVAMI 291
Query: 125 SGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYL 184
SG ++ EA+ F M+ G + Y+F S LSAC ++ L++G Q+H LV + +
Sbjct: 292 SGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFS 351
Query: 185 SDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEM 244
SD Y+ +ALV +Y G + A+ +F M+ R V++N+LI Q G ++A+++F M
Sbjct: 352 SDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRM 411
Query: 245 IKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNR 304
G+EPD TLAS+V AC+ + GQQ+HA K N+ I G ALL++YAKC
Sbjct: 412 HLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEG-ALLNLYAKC-- 471
Query: 305 INEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQN 364
+ ++ A F V++V+ WN ++
Sbjct: 472 -----------------------------ADIETALDYFLETEVENVVLWNVMLVAYGLL 531
Query: 365 GENEEALILFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGED 424
+ + +FR ++ E + P YT+ ++L C L DL+LG Q HS ++K F+
Sbjct: 532 DDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQL----- 591
Query: 425 SDVFVGNSLIDMYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVFCKM 484
+ +V + LIDMY K G ++ + KD VSW MI GY Q F +KAL F +M
Sbjct: 592 -NAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQM 651
Query: 485 LESGEAPDHVTMIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGRAGY 544
L+ G D V + + AC+ L EG+ + G +V L R G
Sbjct: 652 LDRGIRSDEVGLTNAVSACAGLQALKEGQ-QIHAQACVSGFSSDLPFQNALVTLYSRCGK 665
Query: 545 LEEAKNLIEEMSMQPDAIVWGSLLA 569
+EE+ L E + D I W +L++
Sbjct: 712 IEES-YLAFEQTEAGDNIAWNALVS 665
HSP 3 Score: 199.5 bits (506), Expect = 6.6e-51
Identity = 136/552 (24.64%), Postives = 257/552 (46.56%), Query Frame = 1
Query: 22 FSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKLFDRML 81
FS +L+ C + S ++H ++K F+S+T++ N L+ +Y G
Sbjct: 291 FSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLG------------- 350
Query: 82 ERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALVYFAQ 141
N+ S A HIF M Q D ++N++I+G Q G ++A+ F +
Sbjct: 351 --NLIS----------------AEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKR 410
Query: 142 MHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSKCGR 201
MH G + + S + AC+ L G Q+H+ + + S+ + AL+++Y+KC
Sbjct: 411 MHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCAD 470
Query: 202 VEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLASVVSA 261
+E A F E V + V WN ++ Y + + +IF +M + P++ T S++
Sbjct: 471 IETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKT 530
Query: 262 CATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRSVVS 321
C + ++ G+QIH++++K + F+ + + + L+DMYAK +++ A +D++
Sbjct: 531 CIRLGDLELGEQIHSQIIKTN-FQLNAYVCSVLIDMYAKLGKLDTA---WDIL------- 590
Query: 322 ETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESV 381
++ A KDV++W +IAG TQ +++AL FR + +
Sbjct: 591 -------------IRFAG--------KDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGI 650
Query: 382 WPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLIDMYMKCGS 441
N ++ACA L L+ G+Q H+ GF SD+ N+L+ +Y +CG
Sbjct: 651 RSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGF------SSDLPFQNALVTLYSRCGK 710
Query: 442 VENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVFCKMLESGEAPDHVTMIGVLCA 501
+E F+ D ++WNA++ G+ Q+G +AL VF +M G ++ T + A
Sbjct: 711 IEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKA 770
Query: 502 CSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGRAGYLEEAKNLIEEMSMQPDAI 561
S + +G+ +T + G + ++ + + G + +A+ E+S + + +
Sbjct: 771 ASETANMKQGKQVHAVIT-KTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTK-NEV 771
Query: 562 VWGSLLAACKVH 574
W +++ A H
Sbjct: 831 SWNAIINAYSKH 771
HSP 4 Score: 176.4 bits (446), Expect = 6.0e-44
Identity = 137/548 (25.00%), Postives = 238/548 (43.43%), Query Frame = 1
Query: 25 LLNQCARSRSARDTSR-VHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKLFDRMLER 84
LL C ++ + D R +H+ I+K S + +L D Y G + A K+FD M ER
Sbjct: 90 LLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPER 149
Query: 85 NIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALVYFAQMH 144
IF+WN MI E F +M
Sbjct: 150 TIFTWNK-------------------------------MIKELASRNLIGEVFGLFVRMV 209
Query: 145 GHGFLVNEYSFGSALSAC-AGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSKCGRV 204
NE +F L AC G + QIH+ + + + L+D+YS+ G V
Sbjct: 210 SENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFV 269
Query: 205 EYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLASVVSAC 264
+ A+ VFD + ++ SW ++I+ +N EA+++F +M G+ P +SV+SAC
Sbjct: 270 DLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSAC 329
Query: 265 ATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRSVVSE 324
I +++ G+Q+H V+K F +D + NAL+ +Y + +++S
Sbjct: 330 KKIESLEIGEQLHGLVLKLG-FSSDTYVCNALVSLY---------------FHLGNLIS- 389
Query: 325 TSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVW 384
A ++FSNM +D +T+N LI G +Q G E+A+ LF+ + + +
Sbjct: 390 ---------------AEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLE 449
Query: 385 PTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLIDMYMKCGSV 444
P T +L+ AC+ L G+Q H++ K GF S+ + +L+++Y KC +
Sbjct: 450 PDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFA------SNNKIEGALLNLYAKCADI 509
Query: 445 ENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVFCKMLESGEAPDHVTMIGVLCAC 504
E F ++ V WN M+V Y + +F +M P+ T +L C
Sbjct: 510 ETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTC 564
Query: 505 SHAGLLDEGRYYFRSMTAQHGLMPLKDHYTC--MVDLLGRAGYLEEAKNLIEEMSMQPDA 564
G L+ G + + + + Y C ++D+ + G L+ A +++ + + D
Sbjct: 570 IRLGDLELGEQIHSQIIKTNFQL---NAYVCSVLIDMYAKLGKLDTAWDILIRFAGK-DV 564
Query: 565 IVWGSLLA 569
+ W +++A
Sbjct: 630 VSWTTMIA 564
BLAST of Csa5G003610 vs. TAIR10
Match:
AT3G22690.1 (AT3G22690.1 Protein of unknown function DUF1685 (InterPro:IPR012881), Pentatricopeptide repeat (InterPro:IPR002885))
HSP 1 Score: 431.8 bits (1109), Expect = 7.9e-121
Identity = 236/671 (35.17%), Postives = 377/671 (56.18%), Query Frame = 1
Query: 18 DSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKLF 77
D F L+ CA+SR+ + ++H I+K +A + F+QN L+ Y +CG +D ARK+F
Sbjct: 133 DKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVF 192
Query: 78 DRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALV 137
D M ERN+ SW S+IC + + F DAV +F +M + ++ + NS+
Sbjct: 193 DEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSV--------------- 252
Query: 138 YFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYS 197
+ +SACA L+DL+ G ++++ + S + M SALVDMY
Sbjct: 253 ---------------TMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYM 312
Query: 198 KCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLAS 257
KC ++ A+ +FDE + N++ + Y + G EAL +F M+ GV PD +++ S
Sbjct: 313 KCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLS 372
Query: 258 VVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIR 317
+S+C+ + I G+ H V++ + F + + NAL+DMY KC+R + A IFD M +
Sbjct: 373 AISSCSQLRNILWGKSCHGYVLR-NGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNK 432
Query: 318 SVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILF-RLL 377
+VV+ S+V+GY + +V A F M K++++WN +I+G Q EEA+ +F +
Sbjct: 433 TVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQ 492
Query: 378 KRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLIDMY 437
+E V T ++ +AC +L L L + + ++ K+G + DV +G +L+DM+
Sbjct: 493 SQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQL------DVRLGTTLVDMF 552
Query: 438 MKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVFCKMLESGEAPDHVTMI 497
+CG E+ +F + +D +W A I A G +A+E+F M+E G PD V +
Sbjct: 553 SRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFV 612
Query: 498 GVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGRAGYLEEAKNLIEEMSM 557
G L ACSH GL+ +G+ F SM HG+ P HY CMVDLLGRAG LEEA LIE+M M
Sbjct: 613 GALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPM 672
Query: 558 QPDAIVWGSLLAACKVHRNIQLGEYVVKKLLEVDPENSGPYVLLSNMYAENRDWKNVVRV 617
+P+ ++W SLLAAC+V N+++ Y +K+ + PE +G YVLLSN+YA W ++ +V
Sbjct: 673 EPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKV 732
Query: 618 RKLMRQRGVVKQPGCSWIEIQGELNVFMVKDKRHARKKEIYMVLRTILQQMKQAGYVPYV 677
R M+++G+ K PG S I+I+G+ + F D+ H I +L + Q+ G+VP +
Sbjct: 733 RLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDL 766
Query: 678 GSNEFDEDEEQ 688
+ D DE++
Sbjct: 793 SNVLMDVDEKE 766
HSP 2 Score: 211.8 bits (538), Expect = 1.3e-54
Identity = 154/537 (28.68%), Postives = 261/537 (48.60%), Query Frame = 1
Query: 74 RKLFDRMLERNIFSWNSII---CAFTKSGFLDDAVHIFEKMPQVDQC-SWNSMISGFEQH 133
R L + L+ ++ + ++ C L A +FE C +NS+I G+
Sbjct: 53 RSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASS 112
Query: 134 GRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMG 193
G +EA++ F +M G ++Y+F LSACA + G QIH L+ + Y D+++
Sbjct: 113 GLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQ 172
Query: 194 SALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKC-GV 253
++LV Y++CG ++ A+ VFDEM+ R+ VSW S+I Y + +A+ +F M++ V
Sbjct: 173 NSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEV 232
Query: 254 EPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEAR 313
P+ VT+ V+SACA + ++ G++++A + NDL++ +AL+DMY KCN I+ A+
Sbjct: 233 TPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMV-SALVDMYMKCNAIDVAK 292
Query: 314 IIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVK----DVITWNALIAGCTQNG 373
+FD ++ +M S Y + + A +F+ MM D I+ + I+ C+Q
Sbjct: 293 RLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQ-- 352
Query: 374 ENEEALILFRLLKRESVWPTH---YTFGNLLNACANLADLQLGRQAHSHVLKHGFR-FQY 433
R +W Y N + N+ + + H FR F
Sbjct: 353 ------------LRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDR 412
Query: 434 GEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVF 493
+ V NS++ Y++ G V+ F+ M EK+ VSWN +I G Q +A+EVF
Sbjct: 413 MSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVF 472
Query: 494 CKM-LESGEAPDHVTMIGVLCACSHAGLLDEGR--YYFRSMTAQHGLMPLKDHYTCMVDL 553
C M + G D VTM+ + AC H G LD + YY+ ++G+ T +VD+
Sbjct: 473 CSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYY---IEKNGIQLDVRLGTTLVDM 532
Query: 554 LGRAGYLEEAKNLIEEMSMQPDAIVW----GSLLAACKVHRNIQLGEYVVKKLLEVD 591
R G E A ++ ++ + D W G++ A R I+L + ++++ L+ D
Sbjct: 533 FSRCGDPESAMSIFNSLTNR-DVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPD 570
BLAST of Csa5G003610 vs. TAIR10
Match:
AT4G18750.1 (AT4G18750.1 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 430.6 bits (1106), Expect = 1.8e-120
Identity = 241/682 (35.34%), Postives = 372/682 (54.55%), Query Frame = 1
Query: 5 GLVKHLKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVY 64
GL K + + +DS FS + + RS ++H I+KS F + N L+ Y
Sbjct: 181 GLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFY 240
Query: 65 GKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMIS 124
K VD ARK+FD M ER++ SWNSII + +G + + +F +M ++S
Sbjct: 241 LKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQM----------LVS 300
Query: 125 GFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLS 184
G E D A + S + CA + + LG +HS+ ++ +
Sbjct: 301 GIE----IDLATIV-----------------SVFAGCADSRLISLGRAVHSIGVKACFSR 360
Query: 185 DVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMI 244
+ + L+DMYSKCG ++ A++VF EM+ RS VS+ S+I Y + G EA+K+F EM
Sbjct: 361 EDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEME 420
Query: 245 KCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRI 304
+ G+ PD T+ +V++ CA + EG+++H +K ++ D+ + NAL+DMYAKC +
Sbjct: 421 EEGISPDVYTVTAVLNCCARYRLLDEGKRVH-EWIKENDLGFDIFVSNALMDMYAKCGSM 480
Query: 305 NEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNG 364
EA ++F S M VKD+I+WN +I G ++N
Sbjct: 481 QEAELVF-------------------------------SEMRVKDIISWNTIIGGYSKNC 540
Query: 365 ENEEALILFRLLKRESVW-PTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGED 424
EAL LF LL E + P T +L ACA+L+ GR+ H +++++G+
Sbjct: 541 YANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYF------ 600
Query: 425 SDVFVGNSLIDMYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVFCKM 484
SD V NSL+DMY KCG++ +F + KD VSW MI GY +GFG +A+ +F +M
Sbjct: 601 SDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQM 660
Query: 485 LESGEAPDHVTMIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGRAGY 544
++G D ++ + +L ACSH+GL+DEG +F M + + P +HY C+VD+L R G
Sbjct: 661 RQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGD 720
Query: 545 LEEAKNLIEEMSMQPDAIVWGSLLAACKVHRNIQLGEYVVKKLLEVDPENSGPYVLLSNM 604
L +A IE M + PDA +WG+LL C++H +++L E V +K+ E++PEN+G YVL++N+
Sbjct: 721 LIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANI 780
Query: 605 YAENRDWKNVVRVRKLMRQRGVVKQPGCSWIEIQGELNVFMVKDKRHARKKEIYMVLRTI 664
YAE W+ V R+RK + QRG+ K PGCSWIEI+G +N+F+ D + + I LR +
Sbjct: 781 YAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKV 793
Query: 665 LQQMKQAGYVPYVGSNEFDEDE 686
+M + GY P D +E
Sbjct: 841 RARMIEEGYSPLTKYALIDAEE 793
HSP 2 Score: 243.0 bits (619), Expect = 5.2e-64
Identity = 155/495 (31.31%), Postives = 252/495 (50.91%), Query Frame = 1
Query: 80 MLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALVYF 139
+++ N+ S S++ +T G L +A +F+++ WN +++ + G F ++ F
Sbjct: 126 VIDSNLGSKLSLM--YTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLF 185
Query: 140 AQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSKC 199
+M G ++ Y+F + + L+ + G Q+H + +S + +G++LV Y K
Sbjct: 186 KKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKN 245
Query: 200 GRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLASVV 259
RV+ A+ VFDEMT R +SWNS+I Y NG ++ L +FV+M+ G+E D T+ SV
Sbjct: 246 QRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVF 305
Query: 260 SACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRSV 319
+ CA I G+ +H+ VK R D N LLDMY+KC ++ A+ +F M RSV
Sbjct: 306 AGCADSRLISLGRAVHSIGVKACFSREDRFC-NTLLDMYSKCGDLDSAKAVFREMSDRSV 365
Query: 320 VSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRE 379
VS TSM++GYA+ +AG EA+ LF ++ E
Sbjct: 366 VSYTSMIAGYAREG-----------------------LAG--------EAVKLFEEMEEE 425
Query: 380 SVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLIDMYMKC 439
+ P YT +LN CA L G++ H + ++ F D+FV N+L+DMY KC
Sbjct: 426 GISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGF------DIFVSNALMDMYAKC 485
Query: 440 GSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVFCKMLESGE-APDHVTMIGV 499
GS++ VF M KD +SWN +I GY++N + N+AL +F +LE +PD T+ V
Sbjct: 486 GSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACV 545
Query: 500 LCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGRAGYLEEAKNLIEEMSMQP 559
L AC+ D+GR ++G + +VD+ + G L A L ++++ +
Sbjct: 546 LPACASLSAFDKGR-EIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASK- 578
Query: 560 DAIVWGSLLAACKVH 574
D + W ++A +H
Sbjct: 606 DLVSWTVMIAGYGMH 578
HSP 3 Score: 134.4 bits (337), Expect = 2.6e-31
Identity = 107/390 (27.44%), Postives = 180/390 (46.15%), Query Frame = 1
Query: 215 RSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLASVVSACATISAIKEGQQI 274
RS N+ + + ++G ++ A+K+ K ++P TL SV+ CA ++K+G+++
Sbjct: 59 RSVTDANTQLRRFCESGNLENAVKLLCVSGKWDIDPR--TLCSVLQLCADSKSLKDGKEV 118
Query: 275 HARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRSVVSETSMVSGYAKASK 334
++ + F D LG+ L MY C + EA +FD +
Sbjct: 119 D-NFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFD---------------------E 178
Query: 335 VKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVWPTHYTFGNLLNA 394
VK+ + +F WN L+ ++G+ ++ LF+ + V YTF + +
Sbjct: 179 VKIEKALF----------WNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKS 238
Query: 395 CANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLE 454
++L + G Q H +LK GF GE + VGNSL+ Y+K V++ +VF M E
Sbjct: 239 FSSLRSVHGGEQLHGFILKSGF----GERNS--VGNSLVAFYLKNQRVDSARKVFDEMTE 298
Query: 455 KDCVSWNAMIVGYAQNGFGNKALEVFCKMLESGEAPDHVTMIGVLCACSHAGLLDEGRYY 514
+D +SWN++I GY NG K L VF +ML SG D T++ V C+ + L+ GR
Sbjct: 299 RDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGR-- 358
Query: 515 FRSMTAQHGL-----MPLKDHY-TCMVDLLGRAGYLEEAKNLIEEMSMQPDAIVWGSLLA 574
A H + +D + ++D+ + G L+ AK + EMS + + S++A
Sbjct: 359 -----AVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMS-DRSVVSYTSMIA 397
Query: 575 ACKVHRNIQLGEYVVKKLLEVDPENSGPYV 599
+ L VK E++ E P V
Sbjct: 419 G---YAREGLAGEAVKLFEEMEEEGISPDV 397
BLAST of Csa5G003610 vs. NCBI nr
Match:
gi|449462814|ref|XP_004149135.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g13600 isoform X1 [Cucumis sativus])
HSP 1 Score: 1396.7 bits (3614), Expect = 0.0e+00
Identity = 687/687 (100.00%), Postives = 687/687 (100.00%), Query Frame = 1
Query: 1 MAGNGLVKHLKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRL 60
MAGNGLVKHLKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRL
Sbjct: 1 MAGNGLVKHLKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRL 60
Query: 61 IDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN 120
IDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN
Sbjct: 61 IDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN 120
Query: 121 SMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRS 180
SMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRS
Sbjct: 121 SMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRS 180
Query: 181 NYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIF 240
NYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIF
Sbjct: 181 NYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIF 240
Query: 241 VEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK 300
VEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK
Sbjct: 241 VEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK 300
Query: 301 CNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGC 360
CNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGC
Sbjct: 301 CNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGC 360
Query: 361 TQNGENEEALILFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQY 420
TQNGENEEALILFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQY
Sbjct: 361 TQNGENEEALILFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQY 420
Query: 421 GEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVF 480
GEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVF
Sbjct: 421 GEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVF 480
Query: 481 CKMLESGEAPDHVTMIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGR 540
CKMLESGEAPDHVTMIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGR
Sbjct: 481 CKMLESGEAPDHVTMIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGR 540
Query: 541 AGYLEEAKNLIEEMSMQPDAIVWGSLLAACKVHRNIQLGEYVVKKLLEVDPENSGPYVLL 600
AGYLEEAKNLIEEMSMQPDAIVWGSLLAACKVHRNIQLGEYVVKKLLEVDPENSGPYVLL
Sbjct: 541 AGYLEEAKNLIEEMSMQPDAIVWGSLLAACKVHRNIQLGEYVVKKLLEVDPENSGPYVLL 600
Query: 601 SNMYAENRDWKNVVRVRKLMRQRGVVKQPGCSWIEIQGELNVFMVKDKRHARKKEIYMVL 660
SNMYAENRDWKNVVRVRKLMRQRGVVKQPGCSWIEIQGELNVFMVKDKRHARKKEIYMVL
Sbjct: 601 SNMYAENRDWKNVVRVRKLMRQRGVVKQPGCSWIEIQGELNVFMVKDKRHARKKEIYMVL 660
Query: 661 RTILQQMKQAGYVPYVGSNEFDEDEEQ 688
RTILQQMKQAGYVPYVGSNEFDEDEEQ
Sbjct: 661 RTILQQMKQAGYVPYVGSNEFDEDEEQ 687
BLAST of Csa5G003610 vs. NCBI nr
Match:
gi|659129552|ref|XP_008464730.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g13600 [Cucumis melo])
HSP 1 Score: 1356.7 bits (3510), Expect = 0.0e+00
Identity = 667/686 (97.23%), Postives = 674/686 (98.25%), Query Frame = 1
Query: 1 MAGNGLVKHLKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRL 60
MA NGLVKHLKGD LFLDSSPFSKLLNQC RSRSARDTSRVHACIIKSPFASETFIQNRL
Sbjct: 1 MARNGLVKHLKGDFLFLDSSPFSKLLNQCVRSRSARDTSRVHACIIKSPFASETFIQNRL 60
Query: 61 IDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN 120
IDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMP+VDQCSWN
Sbjct: 61 IDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPEVDQCSWN 120
Query: 121 SMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRS 180
SMISGFEQHGRF EALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRS
Sbjct: 121 SMISGFEQHGRFYEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRS 180
Query: 181 NYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIF 240
NYLSDVYMGSALVDMYSKCGRVEYAQS FDEMTVRSRVSWNSLITCYEQNGPVDEALKIF
Sbjct: 181 NYLSDVYMGSALVDMYSKCGRVEYAQSAFDEMTVRSRVSWNSLITCYEQNGPVDEALKIF 240
Query: 241 VEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK 300
VEMI+CGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK
Sbjct: 241 VEMIECGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK 300
Query: 301 CNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGC 360
CNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVAR MFSNMMVKDVITWNALIAGC
Sbjct: 301 CNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARSMFSNMMVKDVITWNALIAGC 360
Query: 361 TQNGENEEALILFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQY 420
TQNGENEEALILFRLLKRES+WPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQY
Sbjct: 361 TQNGENEEALILFRLLKRESIWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQY 420
Query: 421 GEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVF 480
GEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLE+DCVSWNAMIVGYAQNGFGNKALEVF
Sbjct: 421 GEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLERDCVSWNAMIVGYAQNGFGNKALEVF 480
Query: 481 CKMLESGEAPDHVTMIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGR 540
KMLESGE PDHVTMIGVL ACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGR
Sbjct: 481 SKMLESGEGPDHVTMIGVLSACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGR 540
Query: 541 AGYLEEAKNLIEEMSMQPDAIVWGSLLAACKVHRNIQLGEYVVKKLLEVDPENSGPYVLL 600
AGYLEEAKNLIEEMSMQPDAIVWGSLLAACKVHRNIQLGEYVV+KLLEVDPENSGPYVLL
Sbjct: 541 AGYLEEAKNLIEEMSMQPDAIVWGSLLAACKVHRNIQLGEYVVEKLLEVDPENSGPYVLL 600
Query: 601 SNMYAENRDWKNVVRVRKLMRQRGVVKQPGCSWIEIQGELNVFMVKDKRHARKKEIYMVL 660
SNMYAENRDWKNVVRVRKLMRQRGV+KQPGCSWIEIQGELNVFMVKDKRHARKKEI MVL
Sbjct: 601 SNMYAENRDWKNVVRVRKLMRQRGVIKQPGCSWIEIQGELNVFMVKDKRHARKKEICMVL 660
Query: 661 RTILQQMKQAGYVPYVGSNEFDEDEE 687
RTIL QMKQAGYVPY GSNEFDEDE+
Sbjct: 661 RTILHQMKQAGYVPYAGSNEFDEDEQ 686
BLAST of Csa5G003610 vs. NCBI nr
Match:
gi|694384425|ref|XP_009368106.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g13600 [Pyrus x bretschneideri])
HSP 1 Score: 1021.9 bits (2641), Expect = 5.1e-295
Identity = 488/681 (71.66%), Postives = 583/681 (85.61%), Query Frame = 1
Query: 4 NGLVKHLKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDV 63
+GL K GDL FLDS+PF KLL+ C R++SARD R+HA IIK+ F+SE FIQNRLID
Sbjct: 5 HGLFKQFVGDLSFLDSTPFGKLLDSCIRTKSARDARRIHARIIKTQFSSEIFIQNRLIDA 64
Query: 64 YGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMI 123
YGKCGC+D ARKLFD+M ERN F+WNSI+ TK G +D+AV IF MP+ DQCSWNSM+
Sbjct: 65 YGKCGCMDDARKLFDKMPERNTFTWNSILSTLTKLGLIDEAVKIFRLMPEPDQCSWNSMV 124
Query: 124 SGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYL 183
SGF QH RF+E+L YF ++HG F+ NEYSFGSALSACAGL++LK+G QIH+++ +S+Y
Sbjct: 125 SGFAQHDRFEESLEYFVRLHGENFVPNEYSFGSALSACAGLRELKMGVQIHAVIAKSSYS 184
Query: 184 SDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEM 243
SDVYMGSAL+DMYSKCG V AQ VFD M R+ VSWNSLITCYEQNGP EAL++FV+M
Sbjct: 185 SDVYMGSALIDMYSKCGSVSCAQRVFDGMNDRNTVSWNSLITCYEQNGPASEALEVFVKM 244
Query: 244 IKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNR 303
++CG +PDE+TLASVVSACA++SAI EGQQIH VVKCD++R+DL+L NAL+DMYAKC R
Sbjct: 245 MECGFKPDELTLASVVSACASLSAIMEGQQIHTCVVKCDKYRDDLVLCNALVDMYAKCKR 304
Query: 304 INEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQN 363
+ EAR IFD MP+R+VVSETSMVSGYAK++ VK AR MF+ MM +++++WNALIAG TQN
Sbjct: 305 VKEARWIFDRMPVRNVVSETSMVSGYAKSASVKAARLMFTRMMERNIVSWNALIAGYTQN 364
Query: 364 GENEEALILFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGED 423
GENEEAL LF LLKRESV PTHYTFGNLLNACA+L DLQLGRQAH HVLKHGF+FQ GE+
Sbjct: 365 GENEEALGLFLLLKRESVLPTHYTFGNLLNACASLVDLQLGRQAHVHVLKHGFQFQVGEE 424
Query: 424 SDVFVGNSLIDMYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVFCKM 483
D+FVGNSLIDMYMKCGS+E+GCRVF++ML++D VSWNAMIVGYAQNG+G +ALE+F KM
Sbjct: 425 PDIFVGNSLIDMYMKCGSIEDGCRVFKNMLQRDYVSWNAMIVGYAQNGYGIEALELFRKM 484
Query: 484 LESGEAPDHVTMIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGRAGY 543
L SGE PDHVTMIGVLCACSHAGL+DEG+ YF SM+ +HGL+PLKDHYTCMVDLLGRAG
Sbjct: 485 LASGEQPDHVTMIGVLCACSHAGLVDEGKKYFYSMSEEHGLVPLKDHYTCMVDLLGRAGC 544
Query: 544 LEEAKNLIEEMSMQPDAIVWGSLLAACKVHRNIQLGEYVVKKLLEVDPENSGPYVLLSNM 603
L +AKNLIE M MQPDA++WGSLLAACKVHRNI LGEYV +KLL+++P NSGPYVLLSNM
Sbjct: 545 LIDAKNLIEVMPMQPDAVIWGSLLAACKVHRNITLGEYVAEKLLDIEPRNSGPYVLLSNM 604
Query: 604 YAENRDWKNVVRVRKLMRQRGVVKQPGCSWIEIQGELNVFMVKDKRHARKKEIYMVLRTI 663
YAE W +V+RVRKLMRQRGVVKQPGCSWIEIQG ++VF+VKDKRH ++KEI+ VL+ +
Sbjct: 605 YAELGRWADVIRVRKLMRQRGVVKQPGCSWIEIQGHVHVFLVKDKRHPQRKEIHDVLKLL 664
Query: 664 LQQMKQAGYVPYVGSNEFDED 685
L+QMK++GYV E DE+
Sbjct: 665 LEQMKRSGYVEDACDLESDEE 685
BLAST of Csa5G003610 vs. NCBI nr
Match:
gi|590693167|ref|XP_007044258.1| (Pentatricopeptide repeat (PPR) superfamily protein [Theobroma cacao])
HSP 1 Score: 1017.7 bits (2630), Expect = 9.6e-294
Identity = 491/687 (71.47%), Postives = 585/687 (85.15%), Query Frame = 1
Query: 1 MAGNGLVKHLKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRL 60
MA GL+K + GDL DSSPF+KLL+ +S+S D R+HA I KS FASETFI NRL
Sbjct: 1 MAKRGLLKQIVGDLSLPDSSPFAKLLDSYIQSKSLLDVHRLHARITKSNFASETFILNRL 60
Query: 61 IDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN 120
ID YGKCG ++ ARK+FDRM +RNIFSWNS I A TK GF+D+A IF M + DQCSWN
Sbjct: 61 IDAYGKCGSLEDARKVFDRMPQRNIFSWNSAITALTKFGFVDEAARIFGSMSEHDQCSWN 120
Query: 121 SMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRS 180
S+ISGF Q +F+EAL YF +MH F +NEYSFGSALSAC+GL+D+K+G+QIH+L+ ++
Sbjct: 121 SIISGFAQQDKFEEALYYFVRMHREDFALNEYSFGSALSACSGLKDMKMGTQIHALMTKT 180
Query: 181 NYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIF 240
+LSDVYMGSALVDMY KCG V AQ FD+M R+RVSWNSLITCYEQNGP AL++F
Sbjct: 181 LFLSDVYMGSALVDMYGKCGSVCCAQRAFDDMNQRNRVSWNSLITCYEQNGPAGVALEVF 240
Query: 241 VEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK 300
+ M+ CG+EPDEVTLASVVSACA++SAIKEG+QIHARVVKC + R+DL+L NAL+DMYAK
Sbjct: 241 LRMMDCGIEPDEVTLASVVSACASLSAIKEGKQIHARVVKCIKLRDDLVLCNALVDMYAK 300
Query: 301 CNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGC 360
C+RINEAR +FD MP+R+VVSETSMVSGYAKA+ VK AR MF MM +++++WNALIAG
Sbjct: 301 CSRINEARCVFDRMPVRNVVSETSMVSGYAKAASVKTARLMFMKMMERNIVSWNALIAGY 360
Query: 361 TQNGENEEALILFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQY 420
TQNGE+EEAL LFRLLKRESV PTHYTFGNLLNACANLADLQLGRQAH+HVLKHGFRFQ+
Sbjct: 361 TQNGEDEEALRLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVLKHGFRFQF 420
Query: 421 GEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVF 480
GEDSD+FVGNSLIDMYMKCGSVE+G +VF++M+E+D VSWNAMIVGYAQNG+GNKALE+F
Sbjct: 421 GEDSDIFVGNSLIDMYMKCGSVEDGDQVFKNMMERDWVSWNAMIVGYAQNGYGNKALELF 480
Query: 481 CKMLESGEAPDHVTMIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGR 540
ML SGE PDHVTMIGVLCACSHAGL++EGR++F SM+++HGL+PLKDHYTCMVDLLGR
Sbjct: 481 KNMLVSGEKPDHVTMIGVLCACSHAGLVEEGRHHFSSMSSEHGLVPLKDHYTCMVDLLGR 540
Query: 541 AGYLEEAKNLIEEMSMQPDAIVWGSLLAACKVHRNIQLGEYVVKKLLEVDPENSGPYVLL 600
AG L EAKNLIE M M+PDA+VWGSLL ACK+HR+I LG+YV +KLLE+DP NSGPYVLL
Sbjct: 541 AGCLNEAKNLIETMPMKPDAVVWGSLLGACKIHRDITLGKYVAEKLLEIDPSNSGPYVLL 600
Query: 601 SNMYAENRDWKNVVRVRKLMRQRGVVKQPGCSWIEIQGELNVFMVKDKRHARKKEIYMVL 660
SNMYAE W +VVRVRKLM++RGV+KQPGCSWIEIQG ++VFMVKDKRH ++KEIY VL
Sbjct: 601 SNMYAELGKWGDVVRVRKLMKKRGVIKQPGCSWIEIQGHVSVFMVKDKRHPQRKEIYSVL 660
Query: 661 RTILQQMKQAGYVPYVGSNEFDEDEEQ 688
+++QMKQAGY+P E E+E +
Sbjct: 661 NALIKQMKQAGYLPDAADQEAYEEESE 687
BLAST of Csa5G003610 vs. NCBI nr
Match:
gi|502137052|ref|XP_004502949.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g13600 [Cicer arietinum])
HSP 1 Score: 1017.7 bits (2630), Expect = 9.6e-294
Identity = 485/686 (70.70%), Postives = 581/686 (84.69%), Query Frame = 1
Query: 1 MAGNGLVKHLKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRL 60
M +GLV+ + GDL FLDSSPF+KLL+ C RS+S + RVHA IIK+ F+SE FIQNRL
Sbjct: 1 MGKHGLVRKVVGDLSFLDSSPFAKLLDCCVRSKSVFEARRVHARIIKTQFSSEIFIQNRL 60
Query: 61 IDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN 120
+DVYGKCGC++ ARK+FD M ERNIFSWN+++ A TK G LD+A+++F+ MP+ DQCSWN
Sbjct: 61 VDVYGKCGCLEDARKVFDHMPERNIFSWNAVLSALTKCGALDEALNVFKCMPEPDQCSWN 120
Query: 121 SMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRS 180
+M+SGF Q RF+EAL +F MHG F++NEYSFGSALSACAGL DL +G QIH L+ +S
Sbjct: 121 AMVSGFAQRDRFEEALRFFFDMHGEDFVLNEYSFGSALSACAGLIDLNIGFQIHGLIAKS 180
Query: 181 NYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIF 240
Y DVY+GSALVDMYSKCG V AQ FD+M VR+ VSWNSLITCYEQNGP +AL++F
Sbjct: 181 RYSFDVYIGSALVDMYSKCGVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVF 240
Query: 241 VEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK 300
V M+ G+EPDE+TLASVVSACA++SAI+EG QIHARV+KCD+FRNDL+LGNAL+DMYAK
Sbjct: 241 VRMMNFGIEPDEITLASVVSACASLSAIREGLQIHARVMKCDKFRNDLVLGNALVDMYAK 300
Query: 301 CNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGC 360
C R+NEAR++FD MP+R VVSETSMVSGYAK + VK AR MFSNM ++V++WNALIAG
Sbjct: 301 CKRVNEARLVFDRMPLRDVVSETSMVSGYAKVASVKAARLMFSNMTERNVVSWNALIAGY 360
Query: 361 TQNGENEEALILFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQY 420
TQNGENEEA+ LF LLKRES+WPTHYTFGNLLNACANLADL+LGRQAH+ +LKHGF FQ+
Sbjct: 361 TQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQF 420
Query: 421 GEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVF 480
GEDSD+FVGNSLIDMYMKCG VE+G VF+HM+E+D VSWNAMIVGYAQNG+G +ALE+F
Sbjct: 421 GEDSDIFVGNSLIDMYMKCGLVEDGRVVFEHMVERDIVSWNAMIVGYAQNGYGTEALEIF 480
Query: 481 CKMLESGEAPDHVTMIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGR 540
KM SGE PDHVTMIGVL ACSHAGL++EGR YFRSMT +HGL P+KDHYTC+VDLLGR
Sbjct: 481 RKMQVSGEKPDHVTMIGVLSACSHAGLVEEGRRYFRSMTTEHGLAPIKDHYTCLVDLLGR 540
Query: 541 AGYLEEAKNLIEEMSMQPDAIVWGSLLAACKVHRNIQLGEYVVKKLLEVDPENSGPYVLL 600
AG L+EA NLI+ M M+PDA+VWGSLLAACKVH NI LG+ V +KLLE+DP NSGPYVLL
Sbjct: 541 AGCLDEANNLIQTMPMEPDAVVWGSLLAACKVHGNITLGKCVAEKLLEIDPLNSGPYVLL 600
Query: 601 SNMYAENRDWKNVVRVRKLMRQRGVVKQPGCSWIEIQGELNVFMVKDKRHARKKEIYMVL 660
SNMYAE WK+VVRVRK MRQ GV+KQPGCSWIEIQ L+VFMVKDKRH KK+IY++L
Sbjct: 601 SNMYAELGRWKDVVRVRKQMRQMGVIKQPGCSWIEIQSHLHVFMVKDKRHPHKKDIYLIL 660
Query: 661 RTILQQMKQAGYVPYVGSNEFDEDEE 687
+ + +QMK+ GY+P + +E E+EE
Sbjct: 661 KILTEQMKRVGYIPEIDDDETYEEEE 686
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| PP151_ARATH | 1.2e-264 | 65.47 | Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana GN... | [more] |
| PP301_ARATH | 2.0e-126 | 40.00 | Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana GN... | [more] |
| PP249_ARATH | 1.4e-119 | 35.17 | Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana GN... | [more] |
| PP307_ARATH | 1.4e-119 | 35.78 | Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana GN... | [more] |
| PP320_ARATH | 3.1e-119 | 35.34 | Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0KJ63_CUCSA | 0.0e+00 | 100.00 | Uncharacterized protein OS=Cucumis sativus GN=Csa_5G003610 PE=4 SV=1 | [more] |
| A0A061E4Z3_THECC | 6.7e-294 | 71.47 | Pentatricopeptide repeat (PPR) superfamily protein OS=Theobroma cacao GN=TCM_009... | [more] |
| V4SCT8_9ROSI | 1.6e-292 | 71.39 | Uncharacterized protein OS=Citrus clementina GN=CICLE_v10000448mg PE=4 SV=1 | [more] |
| A0A067E6C1_CITSI | 4.8e-292 | 71.24 | Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g005265mg PE=4 SV=1 | [more] |
| G7JC33_MEDTR | 2.5e-288 | 69.93 | PPR containing plant-like protein OS=Medicago truncatula GN=MTR_3g096420 PE=4 SV... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT2G13600.1 | 6.9e-266 | 65.47 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT4G02750.1 | 1.1e-127 | 40.00 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT4G13650.1 | 7.9e-121 | 35.78 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT3G22690.1 | 7.9e-121 | 35.17 | Protein of unknown function DUF1685 (InterPro:IPR012881), Pentatrico... | [more] |
| AT4G18750.1 | 1.8e-120 | 35.34 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
