Csa5G002580 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa5G002580
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionShort-chain dehydrogenase/reductase; contains IPR002347 (Glucose/ribitol dehydrogenase)
LocationChr5 : 147793 .. 151621 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGAAAGAAGAGAGAAGAGGTGGGAGAGAATGAATATTGGATGGGTTTAGGGAAAAGGAAAGGAGATTTGATGGAATGGGAAATCAGATTATTGACACCCCAATTTTGGTGTATCTTTTGAAAATCAATCCCCAAAACCTATAACCTTCGAAATTGGACTATTGTGGTAATTTCCAAATTTGTTGATTGATCCAATTTTTTATGTCATCCCCGACGATGCGGCTCTGTTCTGTGTCTGTAGGGTTTTCGTTGGAGGACTAGAAAAGTGTGGAAGCTTTTGATAAAAGGGTTGGAGGATGCTGGGAACGATGATGGGATTAGGCCAAGGCGGCGCTGGTCTTTCTCAAAAGACTGTTCTGATCACCGGAGTCAGCAAAGGACTTGGCCGAGCTCTTGCTCTCGAGCTCGCAAAGCGTGGCCACTCTGTAATTGGCTGCTCTCGTTCTCAAGATAAACTCAATTCCCTCAATTCCGACTTCATTTCCTTGGACCTCTCTTCCTCTGCCAACCATTTACTCCTCCCTGCCGATGTGGTTAGCATTCTCGCCTCATCTCTACATTCCCATCTCTGTTTCTCTTCCGGAATGTGTTCATCGTCCATCTCGCTTGCAGAGCTCTGATTCCAACGTTCAAGAGTTTGCGCGTGTTGTTGTTGAAAGAAAGGGCGTGCCTGATATTATTGGTATTTACTTGTTCTTTCTTGTTTTCCAATATTTCTCGTGATTAAACAGCTGTTCTCAGTTTTAGGAATGGTTAGGGTTGTGAAATTTGATTGAATTGTGAGCTTCTTAATTTTGTATTTCTAGCATTTTGCTATTTACCCATCTTAACCTCCTACATGTTGGATCCGGGAGGTGATTCAGAAAGCCTTTTCTTTGGATTCTACTTCTTAATCTGACCAAGCGATTTCCTTTTATAATGGTGAGCCATATATGATTCTTCTATTAAATGAAATAATGAAACTAAAATCCAGGAGGCATCCTTCTTTATGAGTAGAAGGAATAAGATAAGACAACTTTTTACTTTGTGCTATATTTTTCGTCGAATGATGAATAGAAAATGATGGATGTACACGATTTAGGTAATGGATAGTCCAAGAAGATCCTAGATGATTATCAGTAAATTCTAGAATGAGAAAAAGAAAAAGAATTAAGTCATCACTCATAAGTGAGACCTTAGTCTTACTCCCGTTCACTACTGATTCTGTTTTCTCTTTCTCTAGCTTCTTTACGAACACTCTTCTGATATAGCTACTCAATCAAGATCTGATCTGCTTTTGAGAGGCGTTATTCAGTTAAGAGATTTTTTTTCTTCTTTTTTTATAACGATATTGATTAAAAAAGGAACAAATATGTGTCTGCAGACGTACAGTTGAGAGCGGAACATTTGAGTGTGAAAATTTGATTTTTATATTTTCTTATTAGCATTCTTGGAAGAATAAAAATTTATTGCTTTTATTTTAACGTTCAAGGCACAGCCACTTTAGTTTGCCTAACATGGTCCCAACCTCTGTGAGTGGGCGGTGAAAGGGCTCAAAGGCACACAGCGAAATCTATGGAAAGACATTTCTATTCATCTTCTTTCATTTTCCATTTTGTGTTTGTTTTTTGGGAGACGGGAAATGTGTTTTGGTAAGATCCCTAGACCCTTCTCTTCTGTGTTACCTAGGTTATATCATTTGTCCTCTTTGAACATTTGTTTTGTGTTAAACTTTTTGATTTGGTCGGGGAATTCTGTTGCTTTCTTCTTTGGCTTCTGTTGGTCGTTGTCCAATATGGAAATGAAATCCAATCAATCATATTTAGAATTTAGAAAGATGAGAATAAATGTAAATATGCACAAGATATTATTAATAGGAGTAGGGAACTAGGATTCTCTTTCGAAGATACAAAATATGATTGAAAGAAATATACAAATTTTGACCATCTTGAGTTAATCATCATTTAAAGGGAAAAACTACCCACTTCTATATAACTTCCATTCAAGCAAGGTAAATGACTTATTTTGTTTATAGATTCTTGATGCCAAGCTGCTACTTTTAAGATACAATGTTTTCTGTTTTCCTTTGTAAGGAGATTTATTTATACATAAAGCTGAACTGAAATTTTGTTGGTTGTTGCCAGTAAATAATGCAGGTACTATTAATAAGAACTCTAAGGTCTGGGAGGTTCCTCCAGAAGAGTTTGATGCTGTCTATGAGACAAATGTCAAGGGAACAGTAAACATATTGCGTCACTTTATCCCACTAATGATTCCAAGCAAGAAAGGAATTATTGTTAATATGTCATCCGGTTGGGGGAGATCTGGTGCTGCCCTGGTACGCTGAAATCTATAACCTAAAATTTATGTTGTTTCCATCAAGGTTGTATGATTGTTTACATTTTTAAACTGTATGTAAATTGTTCCACAAGTTTTCTCTTGGATACATATTGGGTTATAATTGAAGGTTATAATATCCGTTGATATGTTGATGTATCCATAAATCATAAGATTCAACATCAACATTGAAGAATAATCAATATCTTCGATATCTTTTATAAACACTCATTGTTTGATAGTATGAAGTTCCATCTCAAAACCAATTGGCAATGAGAGGAAGAGTCCGTCTATCTTATGGAGTGTGAGTCTCATTGGTTTTTCCAATGTGGGACTCTCAACATCTCCAACATGCCCCCTTAAGATGGTGTCTCTTTGGGTTTACCTAGCTTGGACTGGATACCCGTTTGGGTTTAATGAGCTCTGAGACCATGTTTGATAGTATGGGGTTCCATCTCAAAATCAATTGGCTTGGAGAGGAGTATCTTTATTATATGGAGTGTGAGTCTTCTTGGTTTTTCCAATGTGGGACTCTTAACATCTCCAACACTCATGAAACACTAAAAAAGAAATTCATCTATTAATCTCAATATGATTATACACTATTAACATATATATGATGCATCTTGGAAGTAAAAACAACCGAATTATTAATTTCAATAATTTTATAACATCTTTTTACTTAAAAAATATCCATCAATATCAATACATTCTTTAAATTAAAATTTCAATATCAATATTGACATAGATACTCTAATCTTTAATAATTAATCATGGGTTAAGACTGTGTTTGAGCATAGATTATACTAATAAATTTTCTCACAAGTTCTATTTCCACGTGGCCTTTGGTTTTTTTCATTTTATTATAAAAGGATTTAACTGCATGATTGAAAAGGCAGTAAAAGAAATTATGATAGGATATGAAGAAAGGGACCGTTTAGAAGCTATGGTTGAATTTGAGGCAGTTTATTTTATTTTGTTTTTGTTTTTATTATTTTACTTTTGTTTGATTATGAATCTGAGTTGGAAACAAAAATGGTTGGTCATGTTCATCAATTCTCGGTGTATGCTGCACATGTTCAAGAATTTAGCAAGTGTGCATCATGCATTTTTTTATATTTTGCTAATGTCTACAAACTCTATTTGACATGGATTTTATATGTAGAAAGCATCAAGCAAAAAGGTCATTGTTACCGACTATTCAATGTCAAGCGGAGTTTGGAAGAAGGCAATAAGCTAATGTCTTAAAGTTATCTTGTAGGTTGCACCTTATTGTGCTTCAAAATGGGCCATTGAGGGTTTAACCAGATCAGTGGCCAAAGAATTGCCGGAAGGAATGGGAATTGTGGCCCTTAATCCTGGAGTTATAAACACTGACATGCTGGCCTCATGCTTTGGCGATTCAGCTTCTTTGTACCAGACTCCTGATTCATGGTATAGTTTACTGCTTTATTTCCTCCACCAATATGCTCTTATATCTGCCTCACTCTGAAAAAAAGGAAACCAAATAGCTC

mRNA sequence

ATGTGGTTAGCATTCTCGCCTCATCTCTACATTCCCATCTCTGTTTCTCTTCCGGAATGTGTTCATCGTCCATCTCGCTTGCAGAGCTCTGATTCCAACGTTCAAGAGTTTGCGCGTGTTGTTGTTGAAAGAAAGGGCGTGCCTGATATTATTGTAAATAATGCAGGTACTATTAATAAGAACTCTAAGGTCTGGGAGGTTCCTCCAGAAGAGTTTGATGCTGTCTATGAGACAAATGTCAAGGGAACAGTAAACATATTGCGTCACTTTATCCCACTAATGATTCCAAGCAAGAAAGGAATTATTGTTAATATGTCATCCGGTTGGGGGAGATCTGGTGCTGCCCTGGTTGCACCTTATTGTGCTTCAAAATGGGCCATTGAGGGTTTAACCAGATCAGTGGCCAAAGAATTGCCGGAAGGAATGGGAATTGTGGCCCTTAATCCTGGAGTTATAAACACTGACATGCTGGCCTCATGCTTTGGCGATTCAGCTTCTTTGTACCAGACTCCTGATTCATGGTATAGTTTACTGCTTTATTTCCTCCACCAATATGCTCTTATATCTGCCTCACTCTGA

Coding sequence (CDS)

ATGTGGTTAGCATTCTCGCCTCATCTCTACATTCCCATCTCTGTTTCTCTTCCGGAATGTGTTCATCGTCCATCTCGCTTGCAGAGCTCTGATTCCAACGTTCAAGAGTTTGCGCGTGTTGTTGTTGAAAGAAAGGGCGTGCCTGATATTATTGTAAATAATGCAGGTACTATTAATAAGAACTCTAAGGTCTGGGAGGTTCCTCCAGAAGAGTTTGATGCTGTCTATGAGACAAATGTCAAGGGAACAGTAAACATATTGCGTCACTTTATCCCACTAATGATTCCAAGCAAGAAAGGAATTATTGTTAATATGTCATCCGGTTGGGGGAGATCTGGTGCTGCCCTGGTTGCACCTTATTGTGCTTCAAAATGGGCCATTGAGGGTTTAACCAGATCAGTGGCCAAAGAATTGCCGGAAGGAATGGGAATTGTGGCCCTTAATCCTGGAGTTATAAACACTGACATGCTGGCCTCATGCTTTGGCGATTCAGCTTCTTTGTACCAGACTCCTGATTCATGGTATAGTTTACTGCTTTATTTCCTCCACCAATATGCTCTTATATCTGCCTCACTCTGA

Protein sequence

MWLAFSPHLYIPISVSLPECVHRPSRLQSSDSNVQEFARVVVERKGVPDIIVNNAGTINKNSKVWEVPPEEFDAVYETNVKGTVNILRHFIPLMIPSKKGIIVNMSSGWGRSGAALVAPYCASKWAIEGLTRSVAKELPEGMGIVALNPGVINTDMLASCFGDSASLYQTPDSWYSLLLYFLHQYALISASL*
Homology
[Close]
BLAST of Csa5G002580 vs. Swiss-Prot
Match: PTALR_ARATH (NADPH-dependent pterin aldehyde reductase OS=Arabidopsis thaliana GN=At1g10310 PE=1 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 5.8e-63
Identity = 112/145 (77.24%), Postives = 129/145 (88.97%), Query Frame = 1 

Query: 30  SDSNVQEFARVVVERKGVPDIIVNNAGTINKNSKVWEVPPEEFDAVYETNVKGTVNILRH 89
           S+S+V+E A  +VE+KGVPDIIVNNAGTINKNSK+WEV  E+FD V +TNVKG  N+LRH
Sbjct: 76  SNSSVEEMAHTIVEKKGVPDIIVNNAGTINKNSKIWEVSAEDFDNVMDTNVKGVANVLRH 135

Query: 90  FIPLMIPSKKGIIVNMSSGWGRSGAALVAPYCASKWAIEGLTRSVAKELPEGMGIVALNP 149
           FIPLM+P K+GIIVNMSSGWGRSGAALVAPYCASKWAIEGL+R+VAKE+ EGM +VALNP
Sbjct: 136 FIPLMLPRKQGIIVNMSSGWGRSGAALVAPYCASKWAIEGLSRAVAKEVVEGMAVVALNP 195

Query: 150 GVINTDMLASCFGDSASLYQTPDSW 175
           GVINT++L SCFG+SASLYQ PD+W
Sbjct: 196 GVINTELLTSCFGNSASLYQAPDAW 220

[Close]
BLAST of Csa5G002580 vs. Swiss-Prot
Match: Y2049_STAEQ (Uncharacterized oxidoreductase SERP2049 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=SERP2049 PE=3 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 7.7e-15
Identity = 47/153 (30.72%), Postives = 91/153 (59.48%), Query Frame = 1 

Query: 21  VHRPSRLQSSD----SNVQEFARVVVERKGVPDIIVNNAGTINKNSKVWEVPPEEFDAVY 80
           ++ P+++ S+D    SN+ +  + V++  G  DI+VN+AG  + +SK+ +   E++D + 
Sbjct: 50  LNTPAKVVSADVTVKSNIDDMLKAVIDHFGHIDIVVNSAGQ-SLSSKITDYNVEQWDTMI 109

Query: 81  ETNVKGTVNILRHFIPLMIPSKKGIIVNMSSGWGRSGAALVAPYCASKWAIEGLTRSVAK 140
           + N+KGT+++L+  +P ++    G I+N++S  G       A Y A+K AI  +T+S+ K
Sbjct: 110 DVNIKGTLHVLQATLPYLLKQSSGHIINLASVSGFEPTKTNAVYGATKAAIHAITQSLEK 169

Query: 141 ELPE-GMGIVALNPGVINTDML-ASCFGDSASL 168
           EL   G+ + +++PG+++T M   + FG+   L
Sbjct: 170 ELARTGVKVTSISPGMVDTPMTEGTDFGERKKL 201

[Close]
BLAST of Csa5G002580 vs. Swiss-Prot
Match: Y2036_STAES (Uncharacterized oxidoreductase SE_2036 OS=Staphylococcus epidermidis (strain ATCC 12228) GN=SE_2036 PE=3 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 7.7e-15
Identity = 47/153 (30.72%), Postives = 91/153 (59.48%), Query Frame = 1 

Query: 21  VHRPSRLQSSD----SNVQEFARVVVERKGVPDIIVNNAGTINKNSKVWEVPPEEFDAVY 80
           ++ P+++ S+D    SN+ +  + V++  G  DI+VN+AG  + +SK+ +   E++D + 
Sbjct: 50  LNTPAKVVSADVTVKSNIDDMLKAVIDHFGHIDIVVNSAGQ-SLSSKITDYNVEQWDTMI 109

Query: 81  ETNVKGTVNILRHFIPLMIPSKKGIIVNMSSGWGRSGAALVAPYCASKWAIEGLTRSVAK 140
           + N+KGT+++L+  +P ++    G I+N++S  G       A Y A+K AI  +T+S+ K
Sbjct: 110 DVNIKGTLHVLQATLPYLLKQSSGHIINLASVSGFEPTKTNAVYGATKAAIHAITQSLEK 169

Query: 141 ELPE-GMGIVALNPGVINTDML-ASCFGDSASL 168
           EL   G+ + +++PG+++T M   + FG+   L
Sbjct: 170 ELARTGVKVTSISPGMVDTPMTEGTDFGERKKL 201

[Close]
BLAST of Csa5G002580 vs. Swiss-Prot
Match: FABG_STAES (3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus epidermidis (strain ATCC 12228) GN=fabG PE=3 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 6.5e-14
Identity = 46/124 (37.10%), Postives = 73/124 (58.87%), Query Frame = 1 

Query: 34  VQEFARVVVERKGVPDIIVNNAGTINKNSKVWEVPPEEFDAVYETNVKGTVNILRHFIPL 93
           V+E  + VV + G  D++VNNAG I K++ +  +  +E+D V +TN+KG  N ++   P 
Sbjct: 67  VKEMIKEVVSQFGSVDVLVNNAG-ITKDNLLMRMKEQEWDDVIDTNLKGVFNCIQKVTPQ 126

Query: 94  MIPSKKGIIVNMSSGWGRSGAALVAPYCASKWAIEGLTRSVAKEL-PEGMGIVALNPGVI 153
           M+  + G I+N++S  G  G    A Y A+K  + GLT++ A+EL   G+ + A+ PG I
Sbjct: 127 MLRQRSGAIINLTSIVGAMGNPGQANYVATKAGVIGLTKTAARELASRGITVNAVAPGFI 186

Query: 154 NTDM 157
            +DM
Sbjct: 187 VSDM 189

[Close]
BLAST of Csa5G002580 vs. Swiss-Prot
Match: FABG_STAEQ (3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=fabG PE=3 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 6.5e-14
Identity = 46/124 (37.10%), Postives = 73/124 (58.87%), Query Frame = 1 

Query: 34  VQEFARVVVERKGVPDIIVNNAGTINKNSKVWEVPPEEFDAVYETNVKGTVNILRHFIPL 93
           V+E  + VV + G  D++VNNAG I K++ +  +  +E+D V +TN+KG  N ++   P 
Sbjct: 67  VKEMIKEVVSQFGSVDVLVNNAG-ITKDNLLMRMKEQEWDDVIDTNLKGVFNCIQKVTPQ 126

Query: 94  MIPSKKGIIVNMSSGWGRSGAALVAPYCASKWAIEGLTRSVAKEL-PEGMGIVALNPGVI 153
           M+  + G I+N++S  G  G    A Y A+K  + GLT++ A+EL   G+ + A+ PG I
Sbjct: 127 MLRQRSGAIINLTSIVGAMGNPGQANYVATKAGVIGLTKTAARELASRGITVNAVAPGFI 186

Query: 154 NTDM 157
            +DM
Sbjct: 187 VSDM 189

[Close]
BLAST of Csa5G002580 vs. TrEMBL
Match: A0A0A0KJ58_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G002580 PE=3 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 1.1e-105
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 1 

Query: 1   MWLAFSPHLYIPISVSLPECVHRPSRLQSSDSNVQEFARVVVERKGVPDIIVNNAGTINK 60
           MWLAFSPHLYIPISVSLPECVHRPSRLQSSDSNVQEFARVVVERKGVPDIIVNNAGTINK
Sbjct: 1   MWLAFSPHLYIPISVSLPECVHRPSRLQSSDSNVQEFARVVVERKGVPDIIVNNAGTINK 60

Query: 61  NSKVWEVPPEEFDAVYETNVKGTVNILRHFIPLMIPSKKGIIVNMSSGWGRSGAALVAPY 120
           NSKVWEVPPEEFDAVYETNVKGTVNILRHFIPLMIPSKKGIIVNMSSGWGRSGAALVAPY
Sbjct: 61  NSKVWEVPPEEFDAVYETNVKGTVNILRHFIPLMIPSKKGIIVNMSSGWGRSGAALVAPY 120

Query: 121 CASKWAIEGLTRSVAKELPEGMGIVALNPGVINTDMLASCFGDSASLYQTPDSWYSLLLY 180
           CASKWAIEGLTRSVAKELPEGMGIVALNPGVINTDMLASCFGDSASLYQTPDSWYSLLLY
Sbjct: 121 CASKWAIEGLTRSVAKELPEGMGIVALNPGVINTDMLASCFGDSASLYQTPDSWYSLLLY 180

Query: 181 FLHQYALISASL 193
           FLHQYALISASL
Sbjct: 181 FLHQYALISASL 192

[Close]
BLAST of Csa5G002580 vs. TrEMBL
Match: A0A059ATT1_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I02794 PE=3 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 1.4e-63
Identity = 123/174 (70.69%), Postives = 141/174 (81.03%), Query Frame = 1 

Query: 4   AFSPHLYIPISVSLPECVHRPSRLQSSDSNVQEFARVVVERKGVPDIIVNNAGTINKNSK 63
           A SPHL + + V              S+S+V+E AR V+++ GVPDIIVNNAGTINKN+K
Sbjct: 80  ADSPHLLLNVDVR-------------SNSSVEELARAVMDKTGVPDIIVNNAGTINKNNK 139

Query: 64  VWEVPPEEFDAVYETNVKGTVNILRHFIPLMIPSKKGIIVNMSSGWGRSGAALVAPYCAS 123
           +WEVP EEFDAV +TNVKG  N+LRHF+P MI  K G+IVNMSSGWGRSGAALVAPYCAS
Sbjct: 140 IWEVPAEEFDAVIDTNVKGIANMLRHFLPPMIQRKHGVIVNMSSGWGRSGAALVAPYCAS 199

Query: 124 KWAIEGLTRSVAKELPEGMGIVALNPGVINTDMLASCFGDSASLYQTPDSWYSL 178
           KWA+EGLT+SVAKELP+GM IVALNPGVINTDMLASCFG SASLYQ PD+WY L
Sbjct: 200 KWAVEGLTKSVAKELPDGMAIVALNPGVINTDMLASCFGGSASLYQAPDAWYVL 240

[Close]
BLAST of Csa5G002580 vs. TrEMBL
Match: U5GNJ2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s23710g PE=3 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 1.4e-63
Identity = 119/145 (82.07%), Postives = 134/145 (92.41%), Query Frame = 1 

Query: 30  SDSNVQEFARVVVERKGVPDIIVNNAGTINKNSKVWEVPPEEFDAVYETNVKGTVNILRH 89
           S+S+V+E ARVVVE+KGVPDIIVNNAGTIN+N K+WEV  EEFD+V +TNVKG  N+LRH
Sbjct: 85  SNSSVEELARVVVEKKGVPDIIVNNAGTINQNKKIWEVSEEEFDSVIDTNVKGIANMLRH 144

Query: 90  FIPLMIPSKKGIIVNMSSGWGRSGAALVAPYCASKWAIEGLTRSVAKELPEGMGIVALNP 149
           FIPLMIP+K+GIIVNMSSGWGRSGAALVAPYCASKWA+EGL+RSVAKELPEGM IVALNP
Sbjct: 145 FIPLMIPNKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKELPEGMAIVALNP 204

Query: 150 GVINTDMLASCFGDSASLYQTPDSW 175
           GVI+TDML SCFG SASLYQ PD+W
Sbjct: 205 GVIHTDMLTSCFGTSASLYQDPDTW 229

[Close]
BLAST of Csa5G002580 vs. TrEMBL
Match: A0A067LDB8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00292 PE=3 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 4.0e-63
Identity = 115/147 (78.23%), Postives = 135/147 (91.84%), Query Frame = 1 

Query: 30  SDSNVQEFARVVVERKGVPDIIVNNAGTINKNSKVWEVPPEEFDAVYETNVKGTVNILRH 89
           S+S+V+E A+ V+E+KGVPDIIVNNAGTIN+N+K+WEVP EEFD V +TNVKG  N+LRH
Sbjct: 73  SNSSVEELAKAVMEKKGVPDIIVNNAGTINRNNKLWEVPVEEFDTVIDTNVKGVANVLRH 132

Query: 90  FIPLMIPSKKGIIVNMSSGWGRSGAALVAPYCASKWAIEGLTRSVAKELPEGMGIVALNP 149
           FIPLM+P+K+GIIVNMSSGWGRSGAALVAPYCASKWAIEGLTRSVAKELP+GM ++ALNP
Sbjct: 133 FIPLMLPNKRGIIVNMSSGWGRSGAALVAPYCASKWAIEGLTRSVAKELPDGMAVIALNP 192

Query: 150 GVINTDMLASCFGDSASLYQTPDSWYS 177
           GVI+T+ML SCFG SASLYQ PD+W S
Sbjct: 193 GVIHTEMLQSCFGTSASLYQAPDAWAS 219

[Close]
BLAST of Csa5G002580 vs. TrEMBL
Match: B9SPD4_RICCO (Short-chain dehydrogenase, putative OS=Ricinus communis GN=RCOM_0497310 PE=3 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 6.9e-63
Identity = 113/146 (77.40%), Postives = 135/146 (92.47%), Query Frame = 1 

Query: 29  SSDSNVQEFARVVVERKGVPDIIVNNAGTINKNSKVWEVPPEEFDAVYETNVKGTVNILR 88
           SS+S+V+E A+ ++E+KGVPDIIVNNAGTINKN+K+WEVP EEFD V +TNVKG  N+LR
Sbjct: 85  SSNSSVEELAKAIMEKKGVPDIIVNNAGTINKNNKIWEVPVEEFDTVIDTNVKGIANVLR 144

Query: 89  HFIPLMIPSKKGIIVNMSSGWGRSGAALVAPYCASKWAIEGLTRSVAKELPEGMGIVALN 148
           HFIPLM+P+K+GIIVNMSSGWGRSGAALVAPYCASKWA+EG++RSVAKELP+GM +VALN
Sbjct: 145 HFIPLMLPNKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGMSRSVAKELPDGMAVVALN 204

Query: 149 PGVINTDMLASCFGDSASLYQTPDSW 175
           PGVI+T+ML SCFG SASLYQ PD+W
Sbjct: 205 PGVIHTEMLQSCFGTSASLYQAPDAW 230

[Close]
BLAST of Csa5G002580 vs. TAIR10
Match: AT1G10310.1 (AT1G10310.1 NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 241.9 bits (616), Expect = 3.3e-64
Identity = 112/145 (77.24%), Postives = 129/145 (88.97%), Query Frame = 1 

Query: 30  SDSNVQEFARVVVERKGVPDIIVNNAGTINKNSKVWEVPPEEFDAVYETNVKGTVNILRH 89
           S+S+V+E A  +VE+KGVPDIIVNNAGTINKNSK+WEV  E+FD V +TNVKG  N+LRH
Sbjct: 76  SNSSVEEMAHTIVEKKGVPDIIVNNAGTINKNSKIWEVSAEDFDNVMDTNVKGVANVLRH 135

Query: 90  FIPLMIPSKKGIIVNMSSGWGRSGAALVAPYCASKWAIEGLTRSVAKELPEGMGIVALNP 149
           FIPLM+P K+GIIVNMSSGWGRSGAALVAPYCASKWAIEGL+R+VAKE+ EGM +VALNP
Sbjct: 136 FIPLMLPRKQGIIVNMSSGWGRSGAALVAPYCASKWAIEGLSRAVAKEVVEGMAVVALNP 195

Query: 150 GVINTDMLASCFGDSASLYQTPDSW 175
           GVINT++L SCFG+SASLYQ PD+W
Sbjct: 196 GVINTELLTSCFGNSASLYQAPDAW 220

[Close]
BLAST of Csa5G002580 vs. TAIR10
Match: AT3G26770.1 (AT3G26770.1 NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 66.2 bits (160), Expect = 2.5e-11
Identity = 41/132 (31.06%), Postives = 67/132 (50.76%), Query Frame = 1 

Query: 31  DSNVQEFARVVVERKGVPDIIVNNAGTINKNS--KVWEVPPEEFDAVYETNVKGTVNILR 90
           ++++     + VER G  D++ NNAG +   +   + ++   EF+ V   NV G V+ ++
Sbjct: 101 EADIAGAVEMTVERYGKLDVMYNNAGIVGPMTPASISQLDMTEFERVMRINVFGVVSGIK 160

Query: 91  HFIPLMIPSKKGIIVNMSSGWGRSGAALVAPYCASKWAIEGLTRSVAKELPE-GMGIVAL 150
           H    MIP++ G I+  SS  G +G      Y  SK+   G+ +S A EL E G+ I  +
Sbjct: 161 HAAKFMIPARSGCILCTSSVAGVTGGLAPHSYTISKFTTPGIVKSAASELCEHGVRINCI 220

Query: 151 NPGVINTDMLAS 160
           +PG + T +  S
Sbjct: 221 SPGTVATPLTLS 232

[Close]
BLAST of Csa5G002580 vs. TAIR10
Match: AT4G03140.1 (AT4G03140.1 NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 55.5 bits (132), Expect = 4.3e-08
Identity = 44/144 (30.56%), Postives = 64/144 (44.44%), Query Frame = 1 

Query: 18  PECVHRPSRL--QSSDSNVQEFARVVVERKGVPDIIVNNAGTINKNS-KVWEVPPEEFDA 77
           P C + P  +  +S  +N  +FA   V      DI+ NNAG   K    + ++    FD 
Sbjct: 126 PSCAYFPCDVTKESDIANAVDFA---VSLHTKLDIMYNNAGIPCKTPPSIVDLDLNVFDK 185

Query: 78  VYETNVKGTVNILRHFIPLMIPSKKGIIVNMSSGWGRSGAALVAPYCASKWAIEGLTRSV 137
           V  TNV+G +  ++H   +MIP   G I+   S  G  G      Y  SK A+ G+ RS 
Sbjct: 186 VINTNVRGVMAGIKHAARVMIPRNSGSIICAGSVTGMMGGLAQHTYSVSKSAVIGIVRST 245

Query: 138 AKEL-PEGMGIVALNPGVINTDML 158
           A EL    + +  ++P  I T  +
Sbjct: 246 ASELCKHRIRVNCISPFAITTSFV 266

[Close]
BLAST of Csa5G002580 vs. TAIR10
Match: AT5G51030.1 (AT5G51030.1 NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 48.1 bits (113), Expect = 6.9e-06
Identity = 37/92 (40.22%), Postives = 47/92 (51.09%), Query Frame = 1 

Query: 22  HRPSRLQSSDSNVQEFARVVVERKGVPDIIVNNAGTINKNSKVWEVPPEEFD-AVYETNV 81
           HR   L SS  ++QEF   + E+ G  D+++NNAG    N  V      EF   V  TN 
Sbjct: 91  HRLDILDSS--SIQEFCEWIKEKYGFIDVLINNAGV---NYNVGSDNSVEFSHMVISTNY 150

Query: 82  KGTVNILRHFIPLMIPSKKGI-IVNMSSGWGR 112
            GT NI+   IPLM  + +G  IVN++S  GR
Sbjct: 151 YGTKNIINAMIPLMRHACQGARIVNVTSRLGR 177


HSP 2 Score: 31.6 bits (70), Expect = 6.7e-01
Identity = 28/78 (35.90%), Postives = 30/78 (38.46%), Query Frame = 1 

Query: 106 SSGWGRSGAALVAPYCASKWAIEGLTRSVAKEL---PEGMGIVA--LNPGVINTDMLASC 165
           S GW  S       Y  SK A+   TR +AKEL   PEG  I A    PG + T M    
Sbjct: 223 SGGWPHS----FTDYSVSKMAVNAYTRVLAKELSERPEGEKIYANCFCPGWVKTAMTGYA 282

Query: 166 FGDSASLYQTPDSWYSLL 179
              SA        W +LL
Sbjct: 283 GNVSAEDGADTGVWLALL 296

[Close]
BLAST of Csa5G002580 vs. TAIR10
Match: AT1G07440.1 (AT1G07440.1 NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 47.8 bits (112), Expect = 9.1e-06
Identity = 36/119 (30.25%), Postives = 60/119 (50.42%), Query Frame = 1 

Query: 46  GVPDIIVNNAGTINKNSKVWEVPPEEFDAVYETNVKGTVNILRHFIPLMIPSKKGIIVNM 105
           G  DI++NN G I ++    +   E+F     TN++   ++ +   PL+  S  G I+ M
Sbjct: 91  GKLDILINNLGAI-RSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFM 150

Query: 106 SSGWGRSGAALVAPYCASKWAIEGLTRSVAKE-LPEGMGIVALNPGVINTDMLASCFGD 164
           SS  G   A++ + Y A+K A+  L R++A E   +G+   A+ P VI T +  + + D
Sbjct: 151 SSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDD 208

[Close]
BLAST of Csa5G002580 vs. NCBI nr
Match: gi|700194386|gb|KGN49563.1| (hypothetical protein Csa_5G002580 [Cucumis sativus])

HSP 1 Score: 390.6 bits (1002), Expect = 1.6e-105
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 1 

Query: 1   MWLAFSPHLYIPISVSLPECVHRPSRLQSSDSNVQEFARVVVERKGVPDIIVNNAGTINK 60
           MWLAFSPHLYIPISVSLPECVHRPSRLQSSDSNVQEFARVVVERKGVPDIIVNNAGTINK
Sbjct: 1   MWLAFSPHLYIPISVSLPECVHRPSRLQSSDSNVQEFARVVVERKGVPDIIVNNAGTINK 60

Query: 61  NSKVWEVPPEEFDAVYETNVKGTVNILRHFIPLMIPSKKGIIVNMSSGWGRSGAALVAPY 120
           NSKVWEVPPEEFDAVYETNVKGTVNILRHFIPLMIPSKKGIIVNMSSGWGRSGAALVAPY
Sbjct: 61  NSKVWEVPPEEFDAVYETNVKGTVNILRHFIPLMIPSKKGIIVNMSSGWGRSGAALVAPY 120

Query: 121 CASKWAIEGLTRSVAKELPEGMGIVALNPGVINTDMLASCFGDSASLYQTPDSWYSLLLY 180
           CASKWAIEGLTRSVAKELPEGMGIVALNPGVINTDMLASCFGDSASLYQTPDSWYSLLLY
Sbjct: 121 CASKWAIEGLTRSVAKELPEGMGIVALNPGVINTDMLASCFGDSASLYQTPDSWYSLLLY 180

Query: 181 FLHQYALISASL 193
           FLHQYALISASL
Sbjct: 181 FLHQYALISASL 192

[Close]
BLAST of Csa5G002580 vs. NCBI nr
Match: gi|449462802|ref|XP_004149129.1| (PREDICTED: NADPH-dependent pterin aldehyde reductase [Cucumis sativus])

HSP 1 Score: 298.1 bits (762), Expect = 1.1e-77
Identity = 147/148 (99.32%), Postives = 147/148 (99.32%), Query Frame = 1 

Query: 29  SSDSNVQEFARVVVERKGVPDIIVNNAGTINKNSKVWEVPPEEFDAVYETNVKGTVNILR 88
           SSDSNVQEFARVVVERKGVPDIIVNNAGTINKNSKVWEVPPEEFDAVYETNVKGTVNILR
Sbjct: 80  SSDSNVQEFARVVVERKGVPDIIVNNAGTINKNSKVWEVPPEEFDAVYETNVKGTVNILR 139

Query: 89  HFIPLMIPSKKGIIVNMSSGWGRSGAALVAPYCASKWAIEGLTRSVAKELPEGMGIVALN 148
           HFIPLMIPSKKGIIVNMSSGWGRSGAALVAPYCASKWAIEGLTRSVAKELPEGMGIVALN
Sbjct: 140 HFIPLMIPSKKGIIVNMSSGWGRSGAALVAPYCASKWAIEGLTRSVAKELPEGMGIVALN 199

Query: 149 PGVINTDMLASCFGDSASLYQTPDSWYS 177
           PGVINTDMLASCFGDSASLYQTPDSW S
Sbjct: 200 PGVINTDMLASCFGDSASLYQTPDSWAS 227

[Close]
BLAST of Csa5G002580 vs. NCBI nr
Match: gi|659129567|ref|XP_008464738.1| (PREDICTED: carbonyl reductase family member 4-like isoform X1 [Cucumis melo])

HSP 1 Score: 293.5 bits (750), Expect = 2.7e-76
Identity = 146/167 (87.43%), Postives = 151/167 (90.42%), Query Frame = 1 

Query: 8   HLYIPISVSLPECVHRPSRLQSSDSNVQEFARVVVERKGVPDIIVNNAGTINKNSKVWEV 67
           HL +P+ VS             SDSNVQEFARVVVERKGVPDIIVNNAGTINKNSK+WEV
Sbjct: 72  HLLLPVDVS-------------SDSNVQEFARVVVERKGVPDIIVNNAGTINKNSKIWEV 131

Query: 68  PPEEFDAVYETNVKGTVNILRHFIPLMIPSKKGIIVNMSSGWGRSGAALVAPYCASKWAI 127
           PPEEFDAVYETNVKGTVNILRHFIPLMIPSKKGIIVNMSSGWGRSGAALVAPYCASKWAI
Sbjct: 132 PPEEFDAVYETNVKGTVNILRHFIPLMIPSKKGIIVNMSSGWGRSGAALVAPYCASKWAI 191

Query: 128 EGLTRSVAKELPEGMGIVALNPGVINTDMLASCFGDSASLYQTPDSW 175
           EGLTRSVAKELPEGM IVAL+PGV+NTDMLASCFGDSASLYQTPDSW
Sbjct: 192 EGLTRSVAKELPEGMAIVALSPGVVNTDMLASCFGDSASLYQTPDSW 225

[Close]
BLAST of Csa5G002580 vs. NCBI nr
Match: gi|659129569|ref|XP_008464739.1| (PREDICTED: carbonyl reductase family member 4-like isoform X2 [Cucumis melo])

HSP 1 Score: 280.0 bits (715), Expect = 3.1e-72
Identity = 142/167 (85.03%), Postives = 147/167 (88.02%), Query Frame = 1 

Query: 8   HLYIPISVSLPECVHRPSRLQSSDSNVQEFARVVVERKGVPDIIVNNAGTINKNSKVWEV 67
           HL +P+ VS             SDSNVQEFARVVVERKGVPDII    GTINKNSK+WEV
Sbjct: 72  HLLLPVDVS-------------SDSNVQEFARVVVERKGVPDII----GTINKNSKIWEV 131

Query: 68  PPEEFDAVYETNVKGTVNILRHFIPLMIPSKKGIIVNMSSGWGRSGAALVAPYCASKWAI 127
           PPEEFDAVYETNVKGTVNILRHFIPLMIPSKKGIIVNMSSGWGRSGAALVAPYCASKWAI
Sbjct: 132 PPEEFDAVYETNVKGTVNILRHFIPLMIPSKKGIIVNMSSGWGRSGAALVAPYCASKWAI 191

Query: 128 EGLTRSVAKELPEGMGIVALNPGVINTDMLASCFGDSASLYQTPDSW 175
           EGLTRSVAKELPEGM IVAL+PGV+NTDMLASCFGDSASLYQTPDSW
Sbjct: 192 EGLTRSVAKELPEGMAIVALSPGVVNTDMLASCFGDSASLYQTPDSW 221

[Close]
BLAST of Csa5G002580 vs. NCBI nr
Match: gi|1000949045|ref|XP_015580043.1| (PREDICTED: NADPH-dependent pterin aldehyde reductase isoform X1 [Ricinus communis])

HSP 1 Score: 260.0 bits (663), Expect = 3.3e-66
Identity = 118/160 (73.75%), Postives = 144/160 (90.00%), Query Frame = 1 

Query: 29  SSDSNVQEFARVVVERKGVPDIIVNNAGTINKNSKVWEVPPEEFDAVYETNVKGTVNILR 88
           SS+S+V+E A+ ++E+KGVPDIIVNNAGTINKN+K+WEVP EEFD V +TNVKG  N+LR
Sbjct: 85  SSNSSVEELAKAIMEKKGVPDIIVNNAGTINKNNKIWEVPVEEFDTVIDTNVKGIANVLR 144

Query: 89  HFIPLMIPSKKGIIVNMSSGWGRSGAALVAPYCASKWAIEGLTRSVAKELPEGMGIVALN 148
           HFIPLM+P+K+GIIVNMSSGWGRSGAALVAPYCASKWA+EG++RSVAKELP+GM +VALN
Sbjct: 145 HFIPLMLPNKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGMSRSVAKELPDGMAVVALN 204

Query: 149 PGVINTDMLASCFGDSASLYQTPDSWYSLLLYFLHQYALI 189
           PGVI+T+ML SCFG SASLYQ PD+WYS LL+ +  Y ++
Sbjct: 205 PGVIHTEMLQSCFGTSASLYQAPDAWYSDLLFIIFSYGIL 244

The following BLAST results are available for this feature:
BLAST of Csa5G002580 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PTALR_ARATH5.8e-6377.24NADPH-dependent pterin aldehyde reductase OS=Arabidopsis thaliana GN=At1g10310 P... [more]
Y2049_STAEQ7.7e-1530.72Uncharacterized oxidoreductase SERP2049 OS=Staphylococcus epidermidis (strain AT... [more]
Y2036_STAES7.7e-1530.72Uncharacterized oxidoreductase SE_2036 OS=Staphylococcus epidermidis (strain ATC... [more]
FABG_STAES6.5e-1437.103-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus epidermidis (s... [more]
FABG_STAEQ6.5e-1437.103-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus epidermidis (s... [more]
BLAST of Csa5G002580 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KJ58_CUCSA1.1e-105100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_5G002580 PE=3 SV=1[more]
A0A059ATT1_EUCGR1.4e-6370.69Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I02794 PE=3 SV=1[more]
U5GNJ2_POPTR1.4e-6382.07Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s23710g PE=3 SV=1[more]
A0A067LDB8_JATCU4.0e-6378.23Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00292 PE=3 SV=1[more]
B9SPD4_RICCO6.9e-6377.40Short-chain dehydrogenase, putative OS=Ricinus communis GN=RCOM_0497310 PE=3 SV=... [more]
BLAST of Csa5G002580 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G10310.13.3e-6477.24 NAD(P)-binding Rossmann-fold superfamily protein[more]
AT3G26770.12.5e-1131.06 NAD(P)-binding Rossmann-fold superfamily protein[more]
AT4G03140.14.3e-0830.56 NAD(P)-binding Rossmann-fold superfamily protein[more]
AT5G51030.16.9e-0640.22 NAD(P)-binding Rossmann-fold superfamily protein[more]
AT1G07440.19.1e-0630.25 NAD(P)-binding Rossmann-fold superfamily protein[more]
BLAST of Csa5G002580 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700194386|gb|KGN49563.1|1.6e-105100.00hypothetical protein Csa_5G002580 [Cucumis sativus][more]
gi|449462802|ref|XP_004149129.1|1.1e-7799.32PREDICTED: NADPH-dependent pterin aldehyde reductase [Cucumis sativus][more]
gi|659129567|ref|XP_008464738.1|2.7e-7687.43PREDICTED: carbonyl reductase family member 4-like isoform X1 [Cucumis melo][more]
gi|659129569|ref|XP_008464739.1|3.1e-7285.03PREDICTED: carbonyl reductase family member 4-like isoform X2 [Cucumis melo][more]
gi|1000949045|ref|XP_015580043.1|3.3e-6673.75PREDICTED: NADPH-dependent pterin aldehyde reductase isoform X1 [Ricinus communi... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002347SDR_fam
IPR016040NAD(P)-bd_dom
IPR020904Sc_DH/Rdtase_CS
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042967 acyl-carrier-protein biosynthetic process
biological_process GO:0042335 cuticle development
biological_process GO:0006633 fatty acid biosynthetic process
biological_process GO:0006760 folic acid-containing compound metabolic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0009409 response to cold
biological_process GO:0000038 very long-chain fatty acid metabolic process
cellular_component GO:0005835 fatty acid synthase complex
cellular_component GO:0005829 cytosol
cellular_component GO:0005634 nucleus
molecular_function GO:0004316 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
molecular_function GO:0003723 RNA binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU088223cucumber EST collection version 3.0transcribed_cluster
CU119627cucumber EST collection version 3.0transcribed_cluster
CU126342cucumber EST collection version 3.0transcribed_cluster
CU133744cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa5G002580.1Csa5G002580.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU088223CU088223transcribed_cluster
CU119627CU119627transcribed_cluster
CU126342CU126342transcribed_cluster
CU133744CU133744transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002347Short-chain dehydrogenase/reductase SDRPRINTSPR00080SDRFAMILYcoord: 46..57
score: 4.8E-11coord: 100..108
score: 4.8E-11coord: 120..139
score: 4.8
IPR002347Short-chain dehydrogenase/reductase SDRPRINTSPR00081GDHRDHcoord: 46..57
score: 3.8E-17coord: 140..157
score: 3.8E-17coord: 94..110
score: 3.8E-17coord: 120..139
score: 3.8
IPR002347Short-chain dehydrogenase/reductase SDRPANTHERPTHR24322FAMILY NOT NAMEDcoord: 120..150
score: 2.0E-58coord: 29..104
score: 2.0
IPR002347Short-chain dehydrogenase/reductase SDRPFAMPF00106adh_shortcoord: 30..159
score: 1.4
IPR016040NAD(P)-binding domainGENE3DG3DSA:3.40.50.720coord: 29..163
score: 2.0
IPR016040NAD(P)-binding domainunknownSSF51735NAD(P)-binding Rossmann-fold domainscoord: 30..186
score: 8.4
IPR020904Short-chain dehydrogenase/reductase, conserved sitePROSITEPS00061ADH_SHORTcoord: 107..135
scor
NoneNo IPR availablePANTHERPTHR24322:SF500SUBFAMILY NOT NAMEDcoord: 120..150
score: 2.0E-58coord: 29..104
score: 2.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa5G002580Cla001908Watermelon (97103) v1cuwmB438
Csa5G002580Cp4.1LG01g16870Cucurbita pepo (Zucchini)cpecuB449
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa5G002580Wax gourdcuwgoB520
Csa5G002580Cucumber (Gy14) v1cgycuB394
Csa5G002580Cucurbita maxima (Rimu)cmacuB739
Csa5G002580Cucurbita moschata (Rifu)cmocuB733
Csa5G002580Melon (DHL92) v3.5.1cumeB345
Csa5G002580Watermelon (Charleston Gray)cuwcgB354
Csa5G002580Bottle gourd (USVL1VR-Ls)culsiB340
Csa5G002580Cucumber (Gy14) v2cgybcuB225
Csa5G002580Melon (DHL92) v3.6.1cumedB354
Csa5G002580Melon (DHL92) v3.6.1cumedB368
Csa5G002580Silver-seed gourdcarcuB0692
Csa5G002580Watermelon (97103) v2cuwmbB360