Csa4G664430 (gene) Cucumber (Chinese Long) v2

NameCsa4G664430
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr4 : 23140182 .. 23140415 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGCTCCACATTCCGATTGCCAGAAGGAACCAAAAAAGGGAGACTCGCAACATTACGGCCGCGCGCCTAGTGCAGAAACAAAAACTGAATCCGGAGAGGCCATCACCAACACCAACACCAACACCATCACCATCACCATCACCATCACCATCACCGTCGCCGTCGGAGTGCCTTCTGTGGTTGTAGTGAATTTGATTGGATTCGATGATGGGCGTAAAAGCGAATGGTGA

mRNA sequence

ATGAAAGCTCCACATTCCGATTGCCAGAAGGAACCAAAAAAGGGAGACTCGCAACATTACGGCCGCGCGCCTAGTGCAGAAACAAAAACTGAATCCGGAGAGGCCATCACCAACACCAACACCAACACCATCACCATCACCATCACCATCACCATCACCGTCGCCGTCGGAGTGCCTTCTGTGGTTGTAGTGAATTTGATTGGATTCGATGATGGGCGTAAAAGCGAATGGTGA

Coding sequence (CDS)

ATGAAAGCTCCACATTCCGATTGCCAGAAGGAACCAAAAAAGGGAGACTCGCAACATTACGGCCGCGCGCCTAGTGCAGAAACAAAAACTGAATCCGGAGAGGCCATCACCAACACCAACACCAACACCATCACCATCACCATCACCATCACCATCACCGTCGCCGTCGGAGTGCCTTCTGTGGTTGTAGTGAATTTGATTGGATTCGATGATGGGCGTAAAAGCGAATGGTGA

Protein sequence

MKAPHSDCQKEPKKGDSQHYGRAPSAETKTESGEAITNTNTNTITITITITITVAVGVPSVVVVNLIGFDDGRKSEW*
BLAST of Csa4G664430 vs. TrEMBL
Match: A0A0A0L5Y9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G664430 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 2.9e-36
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 1

Query: 1  MKAPHSDCQKEPKKGDSQHYGRAPSAETKTESGEAITNTNTNTITITITITITVAVGVPS 60
          MKAPHSDCQKEPKKGDSQHYGRAPSAETKTESGEAITNTNTNTITITITITITVAVGVPS
Sbjct: 1  MKAPHSDCQKEPKKGDSQHYGRAPSAETKTESGEAITNTNTNTITITITITITVAVGVPS 60

Query: 61 VVVVNLIGFDDGRKSEW 78
          VVVVNLIGFDDGRKSEW
Sbjct: 61 VVVVNLIGFDDGRKSEW 77

BLAST of Csa4G664430 vs. NCBI nr
Match: gi|700200378|gb|KGN55536.1| (hypothetical protein Csa_4G664430 [Cucumis sativus])

HSP 1 Score: 158.7 bits (400), Expect = 4.2e-36
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 1

Query: 1  MKAPHSDCQKEPKKGDSQHYGRAPSAETKTESGEAITNTNTNTITITITITITVAVGVPS 60
          MKAPHSDCQKEPKKGDSQHYGRAPSAETKTESGEAITNTNTNTITITITITITVAVGVPS
Sbjct: 1  MKAPHSDCQKEPKKGDSQHYGRAPSAETKTESGEAITNTNTNTITITITITITVAVGVPS 60

Query: 61 VVVVNLIGFDDGRKSEW 78
          VVVVNLIGFDDGRKSEW
Sbjct: 61 VVVVNLIGFDDGRKSEW 77

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0L5Y9_CUCSA2.9e-36100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G664430 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700200378|gb|KGN55536.1|4.2e-36100.00hypothetical protein Csa_4G664430 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa4G664430.1Csa4G664430.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None