Csa4G644690 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa4G644690
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr4 : 21691200 .. 21691466 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCAATGTGGTAAAAAGAGCCAGTGGTGGTGATGGAAAACTTCTGGAAAAGGATTCTTTTGAAGAGGAGATGAAGGGTGACCCGGTTATCATTCTTCCATTATCTGTTAGTGGATATATACTTCTGTTAGTGTTCCTTAGAGGAGTTATTGGCGTATATGATGAACCAGCCATTTGGTTGGATGGAAGCCTTATTTATTTTTCGAGCTGGTTTTGTAAGTTGCGTCTTCCCTTTAACATCTTTTGTACTTCTGTTAGAGAGTAA

mRNA sequence

ATGATCAATGTGGTAAAAAGAGCCAGTGGTGGTGATGGAAAACTTCTGGAAAAGGATTCTTTTGAAGAGGAGATGAAGGGTGACCCGGTTATCATTCTTCCATTATCTGTTAGTGGATATATACTTCTGTTAGTGTTCCTTAGAGGAGTTATTGGCGTATATGATGAACCAGCCATTTGGTTGGATGGAAGCCTTATTTATTTTTCGAGCTGGTTTTGTAAGTTGCGTCTTCCCTTTAACATCTTTTGTACTTCTGTTAGAGAGTAA

Coding sequence (CDS)

ATGATCAATGTGGTAAAAAGAGCCAGTGGTGGTGATGGAAAACTTCTGGAAAAGGATTCTTTTGAAGAGGAGATGAAGGGTGACCCGGTTATCATTCTTCCATTATCTGTTAGTGGATATATACTTCTGTTAGTGTTCCTTAGAGGAGTTATTGGCGTATATGATGAACCAGCCATTTGGTTGGATGGAAGCCTTATTTATTTTTCGAGCTGGTTTTGTAAGTTGCGTCTTCCCTTTAACATCTTTTGTACTTCTGTTAGAGAGTAA

Protein sequence

MINVVKRASGGDGKLLEKDSFEEEMKGDPVIILPLSVSGYILLLVFLRGVIGVYDEPAIWLDGSLIYFSSWFCKLRLPFNIFCTSVRE*
Homology
[Close]
BLAST of Csa4G644690 vs. TrEMBL
Match: A0A0A0L3V4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G644690 PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 8.2e-43
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 1 

Query: 1  MINVVKRASGGDGKLLEKDSFEEEMKGDPVIILPLSVSGYILLLVFLRGVIGVYDEPAIW 60
          MINVVKRASGGDGKLLEKDSFEEEMKGDPVIILPLSVSGYILLLVFLRGVIGVYDEPAIW
Sbjct: 1  MINVVKRASGGDGKLLEKDSFEEEMKGDPVIILPLSVSGYILLLVFLRGVIGVYDEPAIW 60

Query: 61 LDGSLIYFSSWFCKLRLPFNIFCTSVRE 89
          LDGSLIYFSSWFCKLRLPFNIFCTSVRE
Sbjct: 61 LDGSLIYFSSWFCKLRLPFNIFCTSVRE 88

[Close]
BLAST of Csa4G644690 vs. NCBI nr
Match: gi|700200134|gb|KGN55292.1| (hypothetical protein Csa_4G644690 [Cucumis sativus])

HSP 1 Score: 180.6 bits (457), Expect = 1.2e-42
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 1 

Query: 1  MINVVKRASGGDGKLLEKDSFEEEMKGDPVIILPLSVSGYILLLVFLRGVIGVYDEPAIW 60
          MINVVKRASGGDGKLLEKDSFEEEMKGDPVIILPLSVSGYILLLVFLRGVIGVYDEPAIW
Sbjct: 1  MINVVKRASGGDGKLLEKDSFEEEMKGDPVIILPLSVSGYILLLVFLRGVIGVYDEPAIW 60

Query: 61 LDGSLIYFSSWFCKLRLPFNIFCTSVRE 89
          LDGSLIYFSSWFCKLRLPFNIFCTSVRE
Sbjct: 61 LDGSLIYFSSWFCKLRLPFNIFCTSVRE 88

The following BLAST results are available for this feature:
BLAST of Csa4G644690 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L3V4_CUCSA8.2e-43100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G644690 PE=4 SV=1[more]
BLAST of Csa4G644690 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700200134|gb|KGN55292.1|1.2e-42100.00hypothetical protein Csa_4G644690 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU120510cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa4G644690.1Csa4G644690.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU120510CU120510transcribed_cluster


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa4G644690Cucurbita pepo (Zucchini)cpecuB116
Csa4G644690Cucurbita pepo (Zucchini)cpecuB491
Csa4G644690Cucurbita pepo (Zucchini)cpecuB564
Csa4G644690Cucurbita pepo (Zucchini)cpecuB782
Csa4G644690Cucurbita pepo (Zucchini)cpecuB831
Csa4G644690Bottle gourd (USVL1VR-Ls)culsiB262
Csa4G644690Bottle gourd (USVL1VR-Ls)culsiB291
Csa4G644690Bottle gourd (USVL1VR-Ls)culsiB317
Csa4G644690Cucumber (Gy14) v2cgybcuB073
Csa4G644690Cucumber (Gy14) v2cgybcuB166
Csa4G644690Cucumber (Gy14) v2cgybcuB177
Csa4G644690Cucumber (Gy14) v2cgybcuB269
Csa4G644690Cucumber (Gy14) v2cgybcuB316
Csa4G644690Melon (DHL92) v3.6.1cumedB275
Csa4G644690Melon (DHL92) v3.6.1cumedB298
Csa4G644690Melon (DHL92) v3.6.1cumedB295
Csa4G644690Melon (DHL92) v3.6.1cumedB315
Csa4G644690Silver-seed gourdcarcuB0002
Csa4G644690Silver-seed gourdcarcuB0204
Csa4G644690Silver-seed gourdcarcuB0347
Csa4G644690Silver-seed gourdcarcuB0407
Csa4G644690Silver-seed gourdcarcuB0440
Csa4G644690Silver-seed gourdcarcuB0486
Csa4G644690Silver-seed gourdcarcuB0789
Csa4G644690Watermelon (97103) v2cuwmbB265
Csa4G644690Watermelon (97103) v2cuwmbB278
Csa4G644690Watermelon (97103) v2cuwmbB309
Csa4G644690Watermelon (97103) v2cuwmbB326
Csa4G644690Wax gourdcuwgoB385
Csa4G644690Wax gourdcuwgoB395
Csa4G644690Wax gourdcuwgoB419
Csa4G644690Cucumber (Chinese Long) v2cucuB062
Csa4G644690Cucumber (Chinese Long) v2cucuB135
Csa4G644690Cucumber (Chinese Long) v2cucuB143
Csa4G644690Cucumber (Chinese Long) v2cucuB153
Csa4G644690Cucumber (Gy14) v1cgycuB120
Csa4G644690Cucumber (Gy14) v1cgycuB321
Csa4G644690Cucumber (Gy14) v1cgycuB494
Csa4G644690Cucumber (Gy14) v1cgycuB550
Csa4G644690Cucurbita maxima (Rimu)cmacuB020
Csa4G644690Cucurbita maxima (Rimu)cmacuB185
Csa4G644690Cucurbita maxima (Rimu)cmacuB473
Csa4G644690Cucurbita maxima (Rimu)cmacuB671
Csa4G644690Cucurbita maxima (Rimu)cmacuB721
Csa4G644690Cucurbita maxima (Rimu)cmacuB801
Csa4G644690Cucurbita maxima (Rimu)cmacuB869
Csa4G644690Cucurbita moschata (Rifu)cmocuB011
Csa4G644690Cucurbita moschata (Rifu)cmocuB169
Csa4G644690Cucurbita moschata (Rifu)cmocuB461
Csa4G644690Cucurbita moschata (Rifu)cmocuB661
Csa4G644690Cucurbita moschata (Rifu)cmocuB713
Csa4G644690Cucurbita moschata (Rifu)cmocuB792
Csa4G644690Cucurbita moschata (Rifu)cmocuB856
Csa4G644690Melon (DHL92) v3.5.1cumeB290
Csa4G644690Melon (DHL92) v3.5.1cumeB309
Csa4G644690Melon (DHL92) v3.5.1cumeB313
Csa4G644690Melon (DHL92) v3.5.1cumeB327
Csa4G644690Watermelon (Charleston Gray)cuwcgB285
Csa4G644690Watermelon (Charleston Gray)cuwcgB313
Csa4G644690Watermelon (Charleston Gray)cuwcgB332
Csa4G644690Watermelon (97103) v1cuwmB298
Csa4G644690Watermelon (97103) v1cuwmB323
Csa4G644690Watermelon (97103) v1cuwmB328