Csa4G639180 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa4G639180
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr4 : 21087770 .. 21087971 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGCGGCTGGCTGCTCTCCGATTAACTGGTGAGTTTCCTTTTCTTTCCCTATTTCTTTCTTTTTGGGATGACAGTAGGGATTTTGGATTCAATTATTTTGCCATTAATTCTGATATTGTATCGATTTCCGATGCCGCATTCACAACTCCGGTTTTGTTGACATGGCGGTTTAGTATCATTGATCGTGCTTGTTCTTGA

mRNA sequence

ATGAAAGCGGCTGGCTGCTCTCCGATTAACTGTAGGGATTTTGGATTCAATTATTTTGCCATTAATTCTGATATTGTATCGATTTCCGATGCCGCATTCACAACTCCGGTTTTGTTGACATGGCGGTTTAGTATCATTGATCGTGCTTGTTCTTGA

Coding sequence (CDS)

ATGAAAGCGGCTGGCTGCTCTCCGATTAACTGTAGGGATTTTGGATTCAATTATTTTGCCATTAATTCTGATATTGTATCGATTTCCGATGCCGCATTCACAACTCCGGTTTTGTTGACATGGCGGTTTAGTATCATTGATCGTGCTTGTTCTTGA

Protein sequence

MKAAGCSPINCRDFGFNYFAINSDIVSISDAAFTTPVLLTWRFSIIDRACS*
Homology
[Close]
BLAST of Csa4G639180 vs. TrEMBL
Match: A0A0A0L2B6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G639180 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 1.8e-21
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 1 

Query: 1  MKAAGCSPINCRDFGFNYFAINSDIVSISDAAFTTPVLLTWRFSIIDRACS 52
          MKAAGCSPINCRDFGFNYFAINSDIVSISDAAFTTPVLLTWRFSIIDRACS
Sbjct: 1  MKAAGCSPINCRDFGFNYFAINSDIVSISDAAFTTPVLLTWRFSIIDRACS 51

[Close]
BLAST of Csa4G639180 vs. NCBI nr
Match: gi|700200021|gb|KGN55179.1| (hypothetical protein Csa_4G639180 [Cucumis sativus])

HSP 1 Score: 109.0 bits (271), Expect = 2.5e-21
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 1 

Query: 1  MKAAGCSPINCRDFGFNYFAINSDIVSISDAAFTTPVLLTWRFSIIDRACS 52
          MKAAGCSPINCRDFGFNYFAINSDIVSISDAAFTTPVLLTWRFSIIDRACS
Sbjct: 1  MKAAGCSPINCRDFGFNYFAINSDIVSISDAAFTTPVLLTWRFSIIDRACS 51

The following BLAST results are available for this feature:
BLAST of Csa4G639180 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L2B6_CUCSA1.8e-21100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G639180 PE=4 SV=1[more]
BLAST of Csa4G639180 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700200021|gb|KGN55179.1|2.5e-21100.00hypothetical protein Csa_4G639180 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa4G639180.1Csa4G639180.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa4G639180Cucumber (Gy14) v2cgybcuB073
Csa4G639180Cucumber (Gy14) v2cgybcuB166
Csa4G639180Cucumber (Gy14) v2cgybcuB316
Csa4G639180Melon (DHL92) v3.6.1cumedB266
Csa4G639180Melon (DHL92) v3.6.1cumedB275
Csa4G639180Melon (DHL92) v3.6.1cumedB298
Csa4G639180Silver-seed gourdcarcuB0112
Csa4G639180Silver-seed gourdcarcuB0204
Csa4G639180Silver-seed gourdcarcuB0789
Csa4G639180Watermelon (97103) v2cuwmbB305
Csa4G639180Watermelon (97103) v2cuwmbB326
Csa4G639180Wax gourdcuwgoB385
Csa4G639180Wax gourdcuwgoB419
Csa4G639180Cucumber (Chinese Long) v2cucuB062
Csa4G639180Cucumber (Gy14) v1cgycuB163
Csa4G639180Cucumber (Gy14) v1cgycuB321
Csa4G639180Cucumber (Gy14) v1cgycuB328
Csa4G639180Cucurbita maxima (Rimu)cmacuB020
Csa4G639180Cucurbita maxima (Rimu)cmacuB186
Csa4G639180Cucurbita maxima (Rimu)cmacuB473
Csa4G639180Cucurbita maxima (Rimu)cmacuB801
Csa4G639180Cucurbita moschata (Rifu)cmocuB011
Csa4G639180Cucurbita moschata (Rifu)cmocuB169
Csa4G639180Cucurbita moschata (Rifu)cmocuB461
Csa4G639180Cucurbita moschata (Rifu)cmocuB792
Csa4G639180Melon (DHL92) v3.5.1cumeB281
Csa4G639180Melon (DHL92) v3.5.1cumeB290
Csa4G639180Melon (DHL92) v3.5.1cumeB313
Csa4G639180Watermelon (Charleston Gray)cuwcgB310
Csa4G639180Watermelon (Charleston Gray)cuwcgB332
Csa4G639180Watermelon (97103) v1cuwmB298
Csa4G639180Watermelon (97103) v1cuwmB319
Csa4G639180Watermelon (97103) v1cuwmB346
Csa4G639180Cucurbita pepo (Zucchini)cpecuB116
Csa4G639180Cucurbita pepo (Zucchini)cpecuB564
Csa4G639180Cucurbita pepo (Zucchini)cpecuB782
Csa4G639180Cucurbita pepo (Zucchini)cpecuB832
Csa4G639180Bottle gourd (USVL1VR-Ls)culsiB291
Csa4G639180Bottle gourd (USVL1VR-Ls)culsiB317