Csa4G627250 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa4G627250
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr4 : 20347813 .. 20348069 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCATTTACCCCCTTAAACTTCCTTTTAATTACACAAAATAGCCCCCCCCGGGACACGTGGCAGAGGCTTAAGAAGGTTCTTTTGCCCTTTGGGTAGTTTCGTAAATGCAAACATAATTAGGGTTATTTGGGGAAAAGCAGGATCTTGTGGCAGAGACAGAAGTAGCTGGCCATGTGCTGGGGAAAGTGGCGTGCCAGCTGGCCCATTCAGGTTGGAGGCTGAAGGATGAGAGTGGCGTCCAGCTAAGCACTTAA

mRNA sequence

ATGCCATTTACCCCCTTAAACTTCCTTTTAATTACACAAAATAGCCCCCCCCGGGACACGTGGCAGAGGCTTAAGAAGGATCTTGTGGCAGAGACAGAAGTAGCTGGCCATGTGCTGGGGAAAGTGGCGTGCCAGCTGGCCCATTCAGGTTGGAGGCTGAAGGATGAGAGTGGCGTCCAGCTAAGCACTTAA

Coding sequence (CDS)

ATGCCATTTACCCCCTTAAACTTCCTTTTAATTACACAAAATAGCCCCCCCCGGGACACGTGGCAGAGGCTTAAGAAGGATCTTGTGGCAGAGACAGAAGTAGCTGGCCATGTGCTGGGGAAAGTGGCGTGCCAGCTGGCCCATTCAGGTTGGAGGCTGAAGGATGAGAGTGGCGTCCAGCTAAGCACTTAA

Protein sequence

MPFTPLNFLLITQNSPPRDTWQRLKKDLVAETEVAGHVLGKVACQLAHSGWRLKDESGVQLST*
Homology
[Close]
BLAST of Csa4G627250 vs. TrEMBL
Match: A0A0A0KZJ0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G627250 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 1.4e-28
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 1 

Query: 1  MPFTPLNFLLITQNSPPRDTWQRLKKDLVAETEVAGHVLGKVACQLAHSGWRLKDESGVQ 60
          MPFTPLNFLLITQNSPPRDTWQRLKKDLVAETEVAGHVLGKVACQLAHSGWRLKDESGVQ
Sbjct: 1  MPFTPLNFLLITQNSPPRDTWQRLKKDLVAETEVAGHVLGKVACQLAHSGWRLKDESGVQ 60

Query: 61 LST 64
          LST
Sbjct: 61 LST 63

[Close]
BLAST of Csa4G627250 vs. NCBI nr
Match: gi|700199917|gb|KGN55075.1| (hypothetical protein Csa_4G627250 [Cucumis sativus])

HSP 1 Score: 132.9 bits (333), Expect = 2.0e-28
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 1 

Query: 1  MPFTPLNFLLITQNSPPRDTWQRLKKDLVAETEVAGHVLGKVACQLAHSGWRLKDESGVQ 60
          MPFTPLNFLLITQNSPPRDTWQRLKKDLVAETEVAGHVLGKVACQLAHSGWRLKDESGVQ
Sbjct: 1  MPFTPLNFLLITQNSPPRDTWQRLKKDLVAETEVAGHVLGKVACQLAHSGWRLKDESGVQ 60

Query: 61 LST 64
          LST
Sbjct: 61 LST 63

The following BLAST results are available for this feature:
BLAST of Csa4G627250 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KZJ0_CUCSA1.4e-28100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G627250 PE=4 SV=1[more]
BLAST of Csa4G627250 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700199917|gb|KGN55075.1|2.0e-28100.00hypothetical protein Csa_4G627250 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa4G627250.1Csa4G627250.1mRNA