Csa4G622750 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa4G622750
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Glucan endo-1,3-beta-glucosidase 4; contains IPR012946 (X8)
Location	Chr4 : 19971009 .. 19971898 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTAAACCAGCTGCCTCTCTCTCTTTTCTCCTTCTATTCCTCTCTTTCCTTTCAGGTAATAAATTAATTCCCTCCACTTCTCTTTCACATTCCTCTGATTTTTCCAATTATCACTCAACAATTTTCTGTTTCCGATTATTATTATTCCTCTTCTTCCTTCTTCAGGACGAGATTTGCTGGCCCTAAATGCACAGGTGACGAGTTATTCATCCTTATCAAATTAGGGGTTTGCAGAAACCAAAACAATAATTATAACCACACCAACAATTCTCTGAATAATTATTTTGAATTCGCGGATTGTGATATTTGCAGAAAACGTGGTGTATTCCGAAGCCTTCGTCGGATCAAGCGACGTTGTTAGCGAATATCAATTACGCTTGTGCACAAGTAGATTGTAGAATAATGCAGAAAGGATGCCCCTGCTCTTATCCTGATACTTTGATCAACCGTGCGGCCATAGCTATGAGTTTGTATTACCATTCCAAAGGGAAGAATCAATGGAACTGTGATTTTAGAGGATCTGGTCTTATGGTCATCACTGATCCAAGTGAGTTCAATTTTAATGGATATATAATATACTCTTATATCTTTTGTGTGTTTGTTTTAATTTGTGGTTTGAATTTTTGGTGTTGTAGGTTATGGGAACTGTATTTACCCTTGAAGCTGAGTGAAGAAGAAGTATAGGAGGGAAACAATTACTTTTGCCCAAAAGCAGATTTAGTCATAAAAAGTGATTTTAAGTATAAAGTTTGTTTTAGAGTCTATATTTTTTTTTTTAGTATAAACGTTGTTTGGATCTTACTTTTTATAATTGAAAGTCGTCCTGATGTAAGTGAAAAGATACCTATTCTAAAGTTTTAGAGTAAATAAAACGAAGCAACATTAGA

mRNA sequence

ATGGCTAAACCAGCTGCCTCTCTCTCTTTTCTCCTTCTATTCCTCTCTTTCCTTTCAGGACGAGATTTGCTGGCCCTAAATGCACAGAAAACGTGGTGTATTCCGAAGCCTTCGTCGGATCAAGCGACGTTGTTAGCGAATATCAATTACGCTTGTGCACAAGTAGATTGTAGAATAATGCAGAAAGGATGCCCCTGCTCTTATCCTGATACTTTGATCAACCGTGCGGCCATAGCTATGAGTTTGTATTACCATTCCAAAGGGAAGAATCAATGGAACTGTGATTTTAGAGGATCTGGTCTTATGGTCATCACTGATCCAAGTTATGGGAACTGTATTTACCCTTGA

Coding sequence (CDS)

ATGGCTAAACCAGCTGCCTCTCTCTCTTTTCTCCTTCTATTCCTCTCTTTCCTTTCAGGACGAGATTTGCTGGCCCTAAATGCACAGAAAACGTGGTGTATTCCGAAGCCTTCGTCGGATCAAGCGACGTTGTTAGCGAATATCAATTACGCTTGTGCACAAGTAGATTGTAGAATAATGCAGAAAGGATGCCCCTGCTCTTATCCTGATACTTTGATCAACCGTGCGGCCATAGCTATGAGTTTGTATTACCATTCCAAAGGGAAGAATCAATGGAACTGTGATTTTAGAGGATCTGGTCTTATGGTCATCACTGATCCAAGTTATGGGAACTGTATTTACCCTTGA

Protein sequence

MAKPAASLSFLLLFLSFLSGRDLLALNAQKTWCIPKPSSDQATLLANINYACAQVDCRIMQKGCPCSYPDTLINRAAIAMSLYYHSKGKNQWNCDFRGSGLMVITDPSYGNCIYP*

Homology

[Close]

BLAST of Csa4G622750 vs. Swiss-Prot
Match: ALL9_OLEEU (Glucan endo-1,3-beta-D-glucosidase OS=Olea europaea GN=OLE9 PE=1 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.5e-18
Identity = 42/89 (47.19%), Postives = 52/89 (58.43%), Query Frame = 1


Query: 28  AQKTWCIPKPSSDQATLLANINYACAQ-VDCRIMQKGCPCSYPDTLINRAAIAMSLYYHS 87
           A  +WC+PKP      L  NINYAC Q +DC  +Q G  C  P+T+   AA  M+LYY S
Sbjct: 368 AAGSWCVPKPGVSDDQLTGNINYACGQGIDCGPIQPGGACFEPNTVKAHAAYVMNLYYQS 427

Query: 88  KGKNQWNCDFRGSGLMVITDPSYGNCIYP 116
            G+N WNCDF  +  +  T+PSYG C +P
Sbjct: 428 AGRNSWNCDFSQTATLTNTNPSYGACNFP 456

[Close]

BLAST of Csa4G622750 vs. Swiss-Prot
Match: E13B_WHEAT (Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum GN=GLC1 PE=2 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 2.7e-15
Identity = 35/83 (42.17%), Postives = 48/83 (57.83%), Query Frame = 1


Query: 32  WCIPKPSSDQATLLANINYACAQVDCRIMQKGCPCSYPDTLINRAAIAMSLYYHSKGKNQ 91
           WC+ K  ++   L  NINYAC  VDC+ +Q G  C  P++L   A+  M+ YY + G   
Sbjct: 377 WCVAKDGANGTDLQNNINYACGFVDCKPIQSGGACFSPNSLQAHASYVMNAYYQANGHTD 436

Query: 92  WNCDFRGSGLMVITDPSYGNCIY 115
             CDF+G+G++  +DPSYG C Y
Sbjct: 437 LACDFKGTGIVTSSDPSYGGCKY 459

[Close]

BLAST of Csa4G622750 vs. Swiss-Prot
Match: ALL10_OLEEU (Major pollen allergen Ole e 10 OS=Olea europaea PE=1 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 6.0e-15
Identity = 36/87 (41.38%), Postives = 54/87 (62.07%), Query Frame = 1


Query: 30  KTWCIPKPSSDQATLLANINYACAQ--VDCRIMQKGCPCSYPDTLINRAAIAMSLYYHSK 89
           K WC+PK  +  A L +NI+Y C+Q  +DC  +Q    C  P+T+   A+ AM+ +Y SK
Sbjct: 35  KKWCVPKAEATDAQLQSNIDYVCSQSGMDCGPIQANGACFNPNTVRAHASYAMNSWYQSK 94

Query: 90  GKNQWNCDFRGSGLMVITDPSYGNCIY 115
           G+N ++CDF G+G +  +DPS G+C +
Sbjct: 95  GRNDFDCDFSGTGAITSSDPSNGSCSF 121

[Close]

BLAST of Csa4G622750 vs. Swiss-Prot
Match: E1312_ARATH (Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana GN=At4g29360 PE=1 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 7.4e-13
Identity = 33/87 (37.93%), Postives = 47/87 (54.02%), Query Frame = 1


Query: 30  KTWCIPKPSSDQATLLANINYACA--QVDCRIMQKGCPCSYPDTLINRAAIAMSLYYHSK 89
           K WCI    +    L   +++AC    VDC  +Q   PC  PDT+++ A+ A + YY   
Sbjct: 389 KKWCIASSQASVTELQTALDWACGPGNVDCSAVQPDQPCFEPDTVLSHASYAFNTYYQQS 448

Query: 90  GKNQWNCDFRGSGLMVITDPSYGNCIY 115
           G +  +C F G+ + V  DPSYGNC+Y
Sbjct: 449 GASSIDCSFNGASVEVDKDPSYGNCLY 475

[Close]

BLAST of Csa4G622750 vs. Swiss-Prot
Match: E134_ARATH (Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana GN=At3g13560 PE=1 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 4.0e-11
Identity = 34/102 (33.33%), Postives = 47/102 (46.08%), Query Frame = 1


Query: 15  LSFLSGRDLLALNAQKTWCIPKPSSDQATLLANINYACAQ--VDCRIMQKGCPCSYPDTL 74
           LS   G    ALN    +C+ K  +D   L+  +N+AC Q   +C  +Q G PC  P+ +
Sbjct: 345 LSLSGGSSSAALNGSSMFCVAKADADDDKLVDGLNWACGQGRANCAAIQPGQPCYLPNDV 404

Query: 75  INRAAIAMSLYYHSKGKNQWNCDFRGSGLMVITDPSYGNCIY 115
            + A+ A + YY         CDF G+ +    DPSY  C Y
Sbjct: 405 KSHASFAFNDYYQKMKSAGGTCDFDGTAITTTRDPSYRTCAY 446

[Close]

BLAST of Csa4G622750 vs. TrEMBL
Match: A0A0A0L4I1_CUCSA (Hydrolase, hydrolyzing O-glycosyl compounds OS=Cucumis sativus GN=Csa_4G622750 PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 1.0e-61
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 1


Query: 1   MAKPAASLSFLLLFLSFLSGRDLLALNAQKTWCIPKPSSDQATLLANINYACAQVDCRIM 60
           MAKPAASLSFLLLFLSFLSGRDLLALNAQKTWCIPKPSSDQATLLANINYACAQVDCRIM
Sbjct: 1   MAKPAASLSFLLLFLSFLSGRDLLALNAQKTWCIPKPSSDQATLLANINYACAQVDCRIM 60

Query: 61  QKGCPCSYPDTLINRAAIAMSLYYHSKGKNQWNCDFRGSGLMVITDPSYGNCIYP 116
           QKGCPCSYPDTLINRAAIAMSLYYHSKGKNQWNCDFRGSGLMVITDPSYGNCIYP
Sbjct: 61  QKGCPCSYPDTLINRAAIAMSLYYHSKGKNQWNCDFRGSGLMVITDPSYGNCIYP 115

[Close]

BLAST of Csa4G622750 vs. TrEMBL
Match: I1M2T7_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_13G262400 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 1.6e-43
Identity = 80/108 (74.07%), Postives = 93/108 (86.11%), Query Frame = 1


Query: 7   SLSFLLLFLSFLSGRDLLALNAQKTWCIPKPSSDQATLLANINYACAQVDCRIMQKGCPC 66
           SL   LLFLS  SG +L+  N QKTWC+ KPSSDQATLLAN+NYAC+QVDCRI+QKGCPC
Sbjct: 5   SLLLFLLFLSLSSGGNLIMANGQKTWCVAKPSSDQATLLANLNYACSQVDCRILQKGCPC 64

Query: 67  SYPDTLINRAAIAMSLYYHSKGKNQWNCDFRGSGLMVITDPSYGNCIY 115
           SYPD L+N A+IAM+LYY S+GKN WNCDFR SG++V+TDPSYGNCIY
Sbjct: 65  SYPDNLMNHASIAMNLYYQSRGKNHWNCDFRASGIVVVTDPSYGNCIY 112

[Close]

BLAST of Csa4G622750 vs. TrEMBL
Match: A0A0B2SSF2_GLYSO (Glucan endo-1,3-beta-glucosidase OS=Glycine soja GN=glysoja_040331 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 1.6e-43
Identity = 80/108 (74.07%), Postives = 93/108 (86.11%), Query Frame = 1


Query: 7   SLSFLLLFLSFLSGRDLLALNAQKTWCIPKPSSDQATLLANINYACAQVDCRIMQKGCPC 66
           SL   LLFLS  SG +L+  N QKTWC+ KPSSDQATLLAN+NYAC+QVDCRI+QKGCPC
Sbjct: 5   SLLLFLLFLSLSSGGNLIMANGQKTWCVAKPSSDQATLLANLNYACSQVDCRILQKGCPC 64

Query: 67  SYPDTLINRAAIAMSLYYHSKGKNQWNCDFRGSGLMVITDPSYGNCIY 115
           SYPD L+N A+IAM+LYY S+GKN WNCDFR SG++V+TDPSYGNCIY
Sbjct: 65  SYPDNLMNHASIAMNLYYQSRGKNHWNCDFRASGIVVVTDPSYGNCIY 112

[Close]

BLAST of Csa4G622750 vs. TrEMBL
Match: I1MIX5_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_15G243000 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 1.6e-43
Identity = 80/108 (74.07%), Postives = 93/108 (86.11%), Query Frame = 1


Query: 7   SLSFLLLFLSFLSGRDLLALNAQKTWCIPKPSSDQATLLANINYACAQVDCRIMQKGCPC 66
           SL   L+FLS  SG +L+  N QKTWC+ KPSSDQATLLAN+NYAC+QVDCRI+QKGCPC
Sbjct: 5   SLLLFLVFLSLSSGANLIMANGQKTWCVAKPSSDQATLLANLNYACSQVDCRILQKGCPC 64

Query: 67  SYPDTLINRAAIAMSLYYHSKGKNQWNCDFRGSGLMVITDPSYGNCIY 115
           SYPD L+N A+IAM+LYY S+GKN WNCDFR SGL+V+TDPSYGNCIY
Sbjct: 65  SYPDNLMNHASIAMNLYYQSRGKNHWNCDFRASGLVVVTDPSYGNCIY 112

[Close]

BLAST of Csa4G622750 vs. TrEMBL
Match: A0A0D2QXA8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G044300 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 4.0e-42
Identity = 79/114 (69.30%), Postives = 97/114 (85.09%), Query Frame = 1


Query: 1   MAKPAASLSFLLLFLSFLSGRDLLALNAQKTWCIPKPSSDQATLLANINYACAQVDCRIM 60
           MAK AA+LS  LL  SF+ G  L+ +N QK+WC+ KPSSDQATLLANIN+AC+QVDCR+M
Sbjct: 1   MAKVAAALSLSLLIFSFIPGGTLMMVNGQKSWCVAKPSSDQATLLANINFACSQVDCRVM 60

Query: 61  QKGCPCSYPDTLINRAAIAMSLYYHSKGKNQWNCDFRGSGLMVITDPSYGNCIY 115
           QKGCPC  PD L+N A+IAM+LYY +KG+N+WNCDFRGSGL+VIT+PSY +CIY
Sbjct: 61  QKGCPCFSPDNLMNHASIAMNLYYQAKGRNKWNCDFRGSGLVVITNPSYADCIY 114

[Close]

BLAST of Csa4G622750 vs. TAIR10
Match: AT1G78520.1 (AT1G78520.1 Carbohydrate-binding X8 domain superfamily protein)

HSP 1 Score: 143.7 bits (361), Expect = 7.3e-35
Identity = 66/115 (57.39%), Postives = 83/115 (72.17%), Query Frame = 1


Query: 1   MAKPAASLSFLLLFLSFLSGRDLLALNAQ-KTWCIPKPSSDQATLLANINYACAQVDCRI 60
           MAK    LSFL+ FL  +S R+ + +NA+ KTWC+ KPSSDQ  L  NIN+AC+ VDCR+
Sbjct: 1   MAKAWICLSFLI-FLYLVSERNFINVNAETKTWCVAKPSSDQVALQDNINFACSHVDCRV 60

Query: 61  MQKGCPCSYPDTLINRAAIAMSLYYHSKGKNQWNCDFRGSGLMVITDPSYGNCIY 115
           +  GCPC  P  LIN A+IAM+LYY + G+N WNC+F+ SGL+ IT+PSYGNC Y
Sbjct: 61  LLSGCPCYSPSNLINHASIAMNLYYQANGRNYWNCNFKNSGLITITNPSYGNCYY 114

[Close]

BLAST of Csa4G622750 vs. TAIR10
Match: AT2G43670.1 (AT2G43670.1 Carbohydrate-binding X8 domain superfamily protein)

HSP 1 Score: 122.1 bits (305), Expect = 2.3e-28
Identity = 53/117 (45.30%), Postives = 79/117 (67.52%), Query Frame = 1


Query: 1   MAKPAASLSFLLLFLSFLSGRDLLALNAQKT---WCIPKPSSDQATLLANINYACAQVDC 60
           MAK    L F++    +  G  +    A ++   WC+ KPS+D   L  NIN+AC+++DC
Sbjct: 1   MAKAQICLCFIIFLYLWPEGNFIKVTKADRSAGDWCVAKPSTDNERLQENINFACSKIDC 60

Query: 61  RIMQKGCPCSYPDTLINRAAIAMSLYYHSKGKNQWNCDFRGSGLMVITDPSYGNCIY 115
           +I+ +G  C  PD++I+RA++AM+LYY ++G++ WNC+F GSGL+ ITDPSYG+CIY
Sbjct: 61  QIISEGGACYLPDSIISRASVAMNLYYQAQGRHFWNCNFEGSGLIGITDPSYGSCIY 117

[Close]

BLAST of Csa4G622750 vs. TAIR10
Match: AT4G09462.1 (AT4G09462.1 Carbohydrate-binding X8 domain superfamily protein)

HSP 1 Score: 91.3 bits (225), Expect = 4.3e-19
Identity = 46/115 (40.00%), Postives = 65/115 (56.52%), Query Frame = 1


Query: 1   MAKPAASLSFLLLFLSFLSGRDLLALNAQKTWCIPKPSSDQATLLANINYACAQ-VDCRI 60
           MAK ++ L+ L + LS +    +  + + KTWCI    +  A L ANIN+AC+Q VDCR 
Sbjct: 1   MAKISSPLALLFIMLSSIM---INHVASSKTWCIATLIATNAQLQANINFACSQGVDCRP 60

Query: 61  MQKGCPCSYPDTLINRAAIAMSLYYHSKGKNQWNCDFRGSGLMVITDPSYGNCIY 115
           +Q G  C  P+ L N A+  M+ YY + G+    C F+ +G    TDPS+G C+Y
Sbjct: 61  IQPGGSCFIPNNLANHASFVMNSYYQTHGRTNQACSFKNTGTFAATDPSFGKCVY 112

[Close]

BLAST of Csa4G622750 vs. TAIR10
Match: AT3G28250.1 (AT3G28250.1 Carbohydrate-binding X8 domain superfamily protein)

HSP 1 Score: 90.1 bits (222), Expect = 9.6e-19
Identity = 37/77 (48.05%), Postives = 51/77 (66.23%), Query Frame = 1


Query: 32  WCIPKPSSDQATLLANINYACAQVDCRIMQKGCPCSYPDTLINRAAIAMSLYYHSKGKNQ 91
           WC+ KP +    L+ N+NYAC+ VDC+I+     C  PD + N A++ M+LYY ++G+N 
Sbjct: 3   WCVAKPGTLTEQLINNLNYACSIVDCQIISTRGACYSPDNIYNMASVVMNLYYQAEGRNF 62

Query: 92  WNCDFRGSGLMVITDPS 109
           WNC+F  SGL+ ITDPS
Sbjct: 63  WNCNFGDSGLVAITDPS 79

[Close]

BLAST of Csa4G622750 vs. TAIR10
Match: AT4G09464.1 (AT4G09464.1 Carbohydrate-binding X8 domain superfamily protein)

HSP 1 Score: 89.7 bits (221), Expect = 1.2e-18
Identity = 45/115 (39.13%), Postives = 65/115 (56.52%), Query Frame = 1


Query: 1   MAKPAASLSFLLLFLSFLSGRDLLALNAQKTWCIPKPSSDQATLLANINYACAQ-VDCRI 60
           MAK ++ L+ L + LS +    +   ++ KTWCI    +  A L ANIN+AC+Q VDCR 
Sbjct: 1   MAKISSPLALLFIMLSSIMINHIHVASS-KTWCIATLIATNAQLQANINFACSQGVDCRP 60

Query: 61  MQKGCPCSYPDTLINRAAIAMSLYYHSKGKNQWNCDFRGSGLMVITDPSYGNCIY 115
           ++ G  C  P+ L N A+  M+ YY + G+    C F+ +G    TDPS+G C+Y
Sbjct: 61  IRPGGSCFIPNNLANHASFVMNSYYQTHGRTNQACSFKNTGTFAATDPSFGKCVY 114

[Close]

BLAST of Csa4G622750 vs. NCBI nr
Match: gi|449456541|ref|XP_004146007.1| (PREDICTED: glucan endo-1,3-beta-D-glucosidase [Cucumis sativus])

HSP 1 Score: 243.8 bits (621), Expect = 1.5e-61
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 1


Query: 1   MAKPAASLSFLLLFLSFLSGRDLLALNAQKTWCIPKPSSDQATLLANINYACAQVDCRIM 60
           MAKPAASLSFLLLFLSFLSGRDLLALNAQKTWCIPKPSSDQATLLANINYACAQVDCRIM
Sbjct: 1   MAKPAASLSFLLLFLSFLSGRDLLALNAQKTWCIPKPSSDQATLLANINYACAQVDCRIM 60

Query: 61  QKGCPCSYPDTLINRAAIAMSLYYHSKGKNQWNCDFRGSGLMVITDPSYGNCIYP 116
           QKGCPCSYPDTLINRAAIAMSLYYHSKGKNQWNCDFRGSGLMVITDPSYGNCIYP
Sbjct: 61  QKGCPCSYPDTLINRAAIAMSLYYHSKGKNQWNCDFRGSGLMVITDPSYGNCIYP 115

[Close]

BLAST of Csa4G622750 vs. NCBI nr
Match: gi|659103025|ref|XP_008452435.1| (PREDICTED: glucan endo-1,3-beta-D-glucosidase [Cucumis melo])

HSP 1 Score: 241.9 bits (616), Expect = 5.6e-61
Identity = 113/115 (98.26%), Postives = 115/115 (100.00%), Query Frame = 1


Query: 1   MAKPAASLSFLLLFLSFLSGRDLLALNAQKTWCIPKPSSDQATLLANINYACAQVDCRIM 60
           MAKPAASLSFLLLFLSFLSGRDLLALNAQKTWCIPKPSSDQATLLANINYACAQVDCRIM
Sbjct: 1   MAKPAASLSFLLLFLSFLSGRDLLALNAQKTWCIPKPSSDQATLLANINYACAQVDCRIM 60

Query: 61  QKGCPCSYPDTLINRAAIAMSLYYHSKGKNQWNCDFRGSGLMVITDPSYGNCIYP 116
           QKGCPCSYPDTLINRAAIAMSLYYHSKGKNQWNCDFRGSGL++ITDPSYGNCIYP
Sbjct: 61  QKGCPCSYPDTLINRAAIAMSLYYHSKGKNQWNCDFRGSGLVIITDPSYGNCIYP 115

[Close]

BLAST of Csa4G622750 vs. NCBI nr
Match: gi|356549590|ref|XP_003543175.1| (PREDICTED: glucan endo-1,3-beta-glucosidase-like [Glycine max])

HSP 1 Score: 183.3 bits (464), Expect = 2.4e-43
Identity = 80/108 (74.07%), Postives = 93/108 (86.11%), Query Frame = 1


Query: 7   SLSFLLLFLSFLSGRDLLALNAQKTWCIPKPSSDQATLLANINYACAQVDCRIMQKGCPC 66
           SL   LLFLS  SG +L+  N QKTWC+ KPSSDQATLLAN+NYAC+QVDCRI+QKGCPC
Sbjct: 5   SLLLFLLFLSLSSGGNLIMANGQKTWCVAKPSSDQATLLANLNYACSQVDCRILQKGCPC 64

Query: 67  SYPDTLINRAAIAMSLYYHSKGKNQWNCDFRGSGLMVITDPSYGNCIY 115
           SYPD L+N A+IAM+LYY S+GKN WNCDFR SG++V+TDPSYGNCIY
Sbjct: 65  SYPDNLMNHASIAMNLYYQSRGKNHWNCDFRASGIVVVTDPSYGNCIY 112

[Close]

BLAST of Csa4G622750 vs. NCBI nr
Match: gi|356556872|ref|XP_003546744.1| (PREDICTED: glucan endo-1,3-beta-glucosidase-like isoform X2 [Glycine max])

HSP 1 Score: 183.3 bits (464), Expect = 2.4e-43
Identity = 80/108 (74.07%), Postives = 93/108 (86.11%), Query Frame = 1


Query: 7   SLSFLLLFLSFLSGRDLLALNAQKTWCIPKPSSDQATLLANINYACAQVDCRIMQKGCPC 66
           SL   L+FLS  SG +L+  N QKTWC+ KPSSDQATLLAN+NYAC+QVDCRI+QKGCPC
Sbjct: 5   SLLLFLVFLSLSSGANLIMANGQKTWCVAKPSSDQATLLANLNYACSQVDCRILQKGCPC 64

Query: 67  SYPDTLINRAAIAMSLYYHSKGKNQWNCDFRGSGLMVITDPSYGNCIY 115
           SYPD L+N A+IAM+LYY S+GKN WNCDFR SGL+V+TDPSYGNCIY
Sbjct: 65  SYPDNLMNHASIAMNLYYQSRGKNHWNCDFRASGLVVVTDPSYGNCIY 112

[Close]

BLAST of Csa4G622750 vs. NCBI nr
Match: gi|823130744|ref|XP_012454569.1| (PREDICTED: glucan endo-1,3-beta-glucosidase-like [Gossypium raimondii])

HSP 1 Score: 178.7 bits (452), Expect = 5.8e-42
Identity = 79/114 (69.30%), Postives = 97/114 (85.09%), Query Frame = 1


Query: 1   MAKPAASLSFLLLFLSFLSGRDLLALNAQKTWCIPKPSSDQATLLANINYACAQVDCRIM 60
           MAK AA+LS  LL  SF+ G  L+ +N QK+WC+ KPSSDQATLLANIN+AC+QVDCR+M
Sbjct: 1   MAKVAAALSLSLLIFSFIPGGTLMMVNGQKSWCVAKPSSDQATLLANINFACSQVDCRVM 60

Query: 61  QKGCPCSYPDTLINRAAIAMSLYYHSKGKNQWNCDFRGSGLMVITDPSYGNCIY 115
           QKGCPC  PD L+N A+IAM+LYY +KG+N+WNCDFRGSGL+VIT+PSY +CIY
Sbjct: 61  QKGCPCFSPDNLMNHASIAMNLYYQAKGRNKWNCDFRGSGLVVITNPSYADCIY 114

The following BLAST results are available for this feature:

BLAST of Csa4G622750 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ALL9_OLEEU	1.5e-18	47.19	Glucan endo-1,3-beta-D-glucosidase OS=Olea europaea GN=OLE9 PE=1 SV=1	[more]
E13B_WHEAT	2.7e-15	42.17	Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum GN=GLC1 PE=2 SV=1	[more]
ALL10_OLEEU	6.0e-15	41.38	Major pollen allergen Ole e 10 OS=Olea europaea PE=1 SV=1	[more]
E1312_ARATH	7.4e-13	37.93	Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana GN=At4g29360 PE=1 SV...	[more]
E134_ARATH	4.0e-11	33.33	Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana GN=At3g13560 PE=1 SV=...	[more]

BLAST of Csa4G622750 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L4I1_CUCSA	1.0e-61	100.00	Hydrolase, hydrolyzing O-glycosyl compounds OS=Cucumis sativus GN=Csa_4G622750 P...	[more]
I1M2T7_SOYBN	1.6e-43	74.07	Uncharacterized protein OS=Glycine max GN=GLYMA_13G262400 PE=4 SV=1	[more]
A0A0B2SSF2_GLYSO	1.6e-43	74.07	Glucan endo-1,3-beta-glucosidase OS=Glycine soja GN=glysoja_040331 PE=4 SV=1	[more]
I1MIX5_SOYBN	1.6e-43	74.07	Uncharacterized protein OS=Glycine max GN=GLYMA_15G243000 PE=4 SV=1	[more]
A0A0D2QXA8_GOSRA	4.0e-42	69.30	Uncharacterized protein OS=Gossypium raimondii GN=B456_002G044300 PE=4 SV=1	[more]

BLAST of Csa4G622750 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G78520.1	7.3e-35	57.39	Carbohydrate-binding X8 domain superfamily protein	[more]
AT2G43670.1	2.3e-28	45.30	Carbohydrate-binding X8 domain superfamily protein	[more]
AT4G09462.1	4.3e-19	40.00	Carbohydrate-binding X8 domain superfamily protein	[more]
AT3G28250.1	9.6e-19	48.05	Carbohydrate-binding X8 domain superfamily protein	[more]
AT4G09464.1	1.2e-18	39.13	Carbohydrate-binding X8 domain superfamily protein	[more]

BLAST of Csa4G622750 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449456541\|ref\|XP_004146007.1\|	1.5e-61	100.00	PREDICTED: glucan endo-1,3-beta-D-glucosidase [Cucumis sativus]	[more]
gi\|659103025\|ref\|XP_008452435.1\|	5.6e-61	98.26	PREDICTED: glucan endo-1,3-beta-D-glucosidase [Cucumis melo]	[more]
gi\|356549590\|ref\|XP_003543175.1\|	2.4e-43	74.07	PREDICTED: glucan endo-1,3-beta-glucosidase-like [Glycine max]	[more]
gi\|356556872\|ref\|XP_003546744.1\|	2.4e-43	74.07	PREDICTED: glucan endo-1,3-beta-glucosidase-like isoform X2 [Glycine max]	[more]
gi\|823130744\|ref\|XP_012454569.1\|	5.8e-42	69.30	PREDICTED: glucan endo-1,3-beta-glucosidase-like [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR012946	X8

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0018106	peptidyl-histidine phosphorylation
biological_process	GO:0008152	metabolic process
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0007165	signal transduction
biological_process	GO:0008150	biological_process
cellular_component	GO:0009365	protein histidine kinase complex
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0004673	protein histidine kinase activity
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0004871	signal transducer activity
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU111636	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa4G622750.1	Csa4G622750.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU111636	CU111636	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012946	X8 domain	PFAM	PF07983	X8	coord: 31..100 score: 2.0
IPR012946	X8 domain	SMART	SM00768	X8_cls	coord: 31..114 score: 7.7
None	No IPR available	PANTHER	PTHR31044	FAMILY NOT NAMED	coord: 1..114 score: 5.0
None	No IPR available	PANTHER	PTHR31044:SF19	CARBOHYDRATE-BINDING X8 DOMAIN-CONTAINING PROTEIN-RELATED	coord: 1..114 score: 5.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa4G622750	Cla023294	Watermelon (97103) v1	cuwmB349
Csa4G622750	MELO3C016683	Melon (DHL92) v3.5.1	cumeB307
Csa4G622750	ClCG11G017040	Watermelon (Charleston Gray)	cuwcgB279
Csa4G622750	Lsi04G019650	Bottle gourd (USVL1VR-Ls)	culsiB283
Csa4G622750	MELO3C016683.2	Melon (DHL92) v3.6.1	cumedB293
Csa4G622750	Cla97C11G223080	Watermelon (97103) v2	cuwmbB279
Csa4G622750	Bhi09G002923	Wax gourd	cuwgoB419
Csa4G622750	CSPI04G22360	Wild cucumber (PI 183967)	cpicuB181
Csa4G622750	Cucsa.058100	Cucumber (Gy14) v1	cgycuB042
Csa4G622750	CmaCh01G012780	Cucurbita maxima (Rimu)	cmacuB474
Csa4G622750	CmaCh09G006850	Cucurbita maxima (Rimu)	cmacuB025
Csa4G622750	CmoCh01G013310	Cucurbita moschata (Rifu)	cmocuB462
Csa4G622750	CmoCh09G006690	Cucurbita moschata (Rifu)	cmocuB016
Csa4G622750	Cp4.1LG06g05350	Cucurbita pepo (Zucchini)	cpecuB786
Csa4G622750	Cp4.1LG02g02240	Cucurbita pepo (Zucchini)	cpecuB565
Csa4G622750	CsGy4G020850	Cucumber (Gy14) v2	cgybcuB166
Csa4G622750	Carg14758	Silver-seed gourd	carcuB0339

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa4G622750	Silver-seed gourd	carcuB0657
Csa4G622750	Cucumber (Gy14) v1	cgycuB043
Csa4G622750	Bottle gourd (USVL1VR-Ls)	culsiB290