Csa4G619050 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa4G619050
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionLysine--tRNA ligase; contains IPR018150 (Aminoacyl-tRNA synthetase, class II (D/K/N)-like)
LocationChr4 : 19812992 .. 19813689 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAAAAAGATACAAATTGACATGGAAATTGAACAAAAGATTCTCAAACAATAACCATCAAAAGTGGAAAAGTATTATTGTAATTTATTTTGCTAGTAGATTTGTTTTCTGGAACAGACTCTGTGAGCTTCAATCGCAAAAAAGATGAGGATGATTCTTATGAAGTGACACTTGATGATGATTTTCTTACAGCTCTGGAATATGGAATGCCACCAGCTTCTGGACTGGTATGCTTATCTTTTCTGTCTGTCCACTTTTCTGTATCACATTTTGGATGGGATCCTTGATGCACTGCTAGTGAAACTCTAGATCACTCCATTCTTTTGACATAATAAAATCACAGAAAAAATAGATTAGAAAGTGGCCAATAAAAGTATCTTGAATAGCTATTTCATAGCTGCTCTGAAGTTTTTCCACATGCAAAACATTTAAAAACCAGCTGCTGAAGTCTCCAATGTGCAAGCTGAGTAGTCTAAAATTTTCAAGTGCATACAAAATTACCGAATCTGGGGCTGGTATTTGATCTATAATTAAATTGTGGAACACATGATGGATGTTTTGTTGTACTTGGATGTTTAGTATCCCCTTTCCTCGCTGTAACTGATTAAAGAATTTAACTTTCAGGGAATTGGAATTGATAGATTAGTGATGCTTCTGACAAACTCTGCAAGCATTCGAGATGTAATTGATACATGA

mRNA sequence

ATGAAAAAAAGATACAAATTGACATGGAAATTGAACAAAAGATTCTCAAACAATAACCATCAAAAGTGGAAAAACTCTGTGAGCTTCAATCGCAAAAAAGATGAGGATGATTCTTATGAAGTGACACTTGATGATGATTTTCTTACAGCTCTGGAATATGGAATGCCACCAGCTTCTGGACTGGGAATTGGAATTGATAGATTAGTGATGCTTCTGACAAACTCTGCAAGCATTCGAGATGTAATTGATACATGA

Coding sequence (CDS)

ATGAAAAAAAGATACAAATTGACATGGAAATTGAACAAAAGATTCTCAAACAATAACCATCAAAAGTGGAAAAACTCTGTGAGCTTCAATCGCAAAAAAGATGAGGATGATTCTTATGAAGTGACACTTGATGATGATTTTCTTACAGCTCTGGAATATGGAATGCCACCAGCTTCTGGACTGGGAATTGGAATTGATAGATTAGTGATGCTTCTGACAAACTCTGCAAGCATTCGAGATGTAATTGATACATGA

Protein sequence

MKKRYKLTWKLNKRFSNNNHQKWKNSVSFNRKKDEDDSYEVTLDDDFLTALEYGMPPASGLGIGIDRLVMLLTNSASIRDVIDT*
Homology
[Close]
BLAST of Csa4G619050 vs. Swiss-Prot
Match: SYKM_ARATH (Lysine--tRNA ligase, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=OVA5 PE=2 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.1e-18
Identity = 44/52 (84.62%), Postives = 49/52 (94.23%), Query Frame = 1 

Query: 31  RKKDEDDSYEVTLDDDFLTALEYGMPPASGLGIGIDRLVMLLTNSASIRDVI 83
           +  D+D+SYEVTLD+DFLTALEYGMPPASG+G+GIDRLVMLLTNSASIRDVI
Sbjct: 542 KDDDDDESYEVTLDEDFLTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVI 593

[Close]
BLAST of Csa4G619050 vs. Swiss-Prot
Match: SYK_ANAVT (Lysine--tRNA ligase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=lysS PE=3 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 7.1e-13
Identity = 38/51 (74.51%), Postives = 39/51 (76.47%), Query Frame = 1 

Query: 32  KKDEDDSYEVTLDDDFLTALEYGMPPASGLGIGIDRLVMLLTNSASIRDVI 83
           KK   D     +D+DFLTALEYGMPP  GLGIGIDRLVMLLT+SASIRDVI
Sbjct: 440 KKAAGDLEAQGVDEDFLTALEYGMPPTGGLGIGIDRLVMLLTDSASIRDVI 490

[Close]
BLAST of Csa4G619050 vs. Swiss-Prot
Match: SYK_NOSS1 (Lysine--tRNA ligase OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=lysS PE=3 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 7.1e-13
Identity = 38/51 (74.51%), Postives = 39/51 (76.47%), Query Frame = 1 

Query: 32  KKDEDDSYEVTLDDDFLTALEYGMPPASGLGIGIDRLVMLLTNSASIRDVI 83
           KK   D     +D+DFLTALEYGMPP  GLGIGIDRLVMLLT+SASIRDVI
Sbjct: 440 KKAAGDLEAQGVDEDFLTALEYGMPPTGGLGIGIDRLVMLLTDSASIRDVI 490

[Close]
BLAST of Csa4G619050 vs. Swiss-Prot
Match: SYK_PELTS (Lysine--tRNA ligase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=lysS PE=3 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 7.1e-13
Identity = 36/52 (69.23%), Postives = 43/52 (82.69%), Query Frame = 1 

Query: 31  RKKDEDDSYEVTLDDDFLTALEYGMPPASGLGIGIDRLVMLLTNSASIRDVI 83
           RK  +++++   +D+D++ ALEYGMPPA GLGIGIDRLVMLLTNSASIRDVI
Sbjct: 448 RKAGDEEAH--MMDEDYINALEYGMPPAGGLGIGIDRLVMLLTNSASIRDVI 497

[Close]
BLAST of Csa4G619050 vs. Swiss-Prot
Match: SYK_GEOSE (Lysine--tRNA ligase OS=Geobacillus stearothermophilus GN=lysS PE=1 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 1.2e-12
Identity = 35/52 (67.31%), Postives = 42/52 (80.77%), Query Frame = 1 

Query: 31  RKKDEDDSYEVTLDDDFLTALEYGMPPASGLGIGIDRLVMLLTNSASIRDVI 83
           R++  D+++E  +D+DFL ALEYGMPP  GLGIG+DRLVMLLTNS SIRDV+
Sbjct: 437 REQGNDEAHE--MDEDFLEALEYGMPPTGGLGIGVDRLVMLLTNSPSIRDVL 486

[Close]
BLAST of Csa4G619050 vs. TrEMBL
Match: A0A0A0L4F7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G619050 PE=4 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 5.6e-41
Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 1 

Query: 1  MKKRYKLTWKLNKRFSNNNHQKWKNSVSFNRKKDEDDSYEVTLDDDFLTALEYGMPPASG 60
          MKKRYKLTWKLNKRFSNNNHQKWKNSVSFNRKKDEDDSYEVTLDDDFLTALEYGMPPASG
Sbjct: 1  MKKRYKLTWKLNKRFSNNNHQKWKNSVSFNRKKDEDDSYEVTLDDDFLTALEYGMPPASG 60

Query: 61 LGIGIDRLVMLLTNSASIRDVIDT 85
          LGIGIDRLVMLLTNSASIRDVIDT
Sbjct: 61 LGIGIDRLVMLLTNSASIRDVIDT 84

[Close]
BLAST of Csa4G619050 vs. TrEMBL
Match: A0A0A0L1N3_CUCSA (Lysine--tRNA ligase OS=Cucumis sativus GN=Csa_4G268050 PE=3 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 5.2e-23
Identity = 57/58 (98.28%), Postives = 58/58 (100.00%), Query Frame = 1 

Query: 25  NSVSFNRKKDEDDSYEVTLDDDFLTALEYGMPPASGLGIGIDRLVMLLTNSASIRDVI 83
           +SVSFNRKKDEDDSYEVTLDDDFLTALEYGMPPASGLGIGIDRLVMLLTNSASIRDVI
Sbjct: 537 DSVSFNRKKDEDDSYEVTLDDDFLTALEYGMPPASGLGIGIDRLVMLLTNSASIRDVI 594

[Close]
BLAST of Csa4G619050 vs. TrEMBL
Match: V7AP93_PHAVU (Lysine--tRNA ligase OS=Phaseolus vulgaris GN=PHAVU_010G046400g PE=3 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 2.1e-19
Identity = 52/68 (76.47%), Postives = 59/68 (86.76%), Query Frame = 1 

Query: 20  HQKWKNSVSFNR-----KKDEDDSYEVTLDDDFLTALEYGMPPASGLGIGIDRLVMLLTN 79
           H+K +++VS N      K+DEDDSYEVTLDDDFLTALEYGMPPASG+G+GIDRLVMLLTN
Sbjct: 507 HEKKRSAVSANEDKKEGKEDEDDSYEVTLDDDFLTALEYGMPPASGMGLGIDRLVMLLTN 566

Query: 80  SASIRDVI 83
           S SIRDVI
Sbjct: 567 SPSIRDVI 574

[Close]
BLAST of Csa4G619050 vs. TrEMBL
Match: A0A0S3SVH1_PHAAN (Lysine--tRNA ligase OS=Vigna angularis var. angularis GN=Vigan.09G016300 PE=3 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 7.8e-19
Identity = 51/68 (75.00%), Postives = 58/68 (85.29%), Query Frame = 1 

Query: 20  HQKWKNSVSFNRKK-----DEDDSYEVTLDDDFLTALEYGMPPASGLGIGIDRLVMLLTN 79
           H+K ++++S N  K     DEDDSYEVTLDDDFLTALEYGMPPASG+G+GIDRLVMLLTN
Sbjct: 507 HEKKRSAISANDDKKEGKDDEDDSYEVTLDDDFLTALEYGMPPASGMGLGIDRLVMLLTN 566

Query: 80  SASIRDVI 83
           S SIRDVI
Sbjct: 567 SPSIRDVI 574

[Close]
BLAST of Csa4G619050 vs. TrEMBL
Match: A0A0L9VUY7_PHAAN (Lysine--tRNA ligase OS=Phaseolus angularis GN=LR48_Vigan11g162800 PE=3 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 7.8e-19
Identity = 51/68 (75.00%), Postives = 58/68 (85.29%), Query Frame = 1 

Query: 20  HQKWKNSVSFNRKK-----DEDDSYEVTLDDDFLTALEYGMPPASGLGIGIDRLVMLLTN 79
           H+K ++++S N  K     DEDDSYEVTLDDDFLTALEYGMPPASG+G+GIDRLVMLLTN
Sbjct: 507 HEKKRSAISANDDKKEGKDDEDDSYEVTLDDDFLTALEYGMPPASGMGLGIDRLVMLLTN 566

Query: 80  SASIRDVI 83
           S SIRDVI
Sbjct: 567 SPSIRDVI 574

[Close]
BLAST of Csa4G619050 vs. TAIR10
Match: AT3G13490.1 (AT3G13490.1 Lysyl-tRNA synthetase, class II)

HSP 1 Score: 93.6 bits (231), Expect = 6.3e-20
Identity = 44/52 (84.62%), Postives = 49/52 (94.23%), Query Frame = 1 

Query: 31  RKKDEDDSYEVTLDDDFLTALEYGMPPASGLGIGIDRLVMLLTNSASIRDVI 83
           +  D+D+SYEVTLD+DFLTALEYGMPPASG+G+GIDRLVMLLTNSASIRDVI
Sbjct: 542 KDDDDDESYEVTLDEDFLTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVI 593

[Close]
BLAST of Csa4G619050 vs. TAIR10
Match: AT3G11710.1 (AT3G11710.1 lysyl-tRNA synthetase 1)

HSP 1 Score: 53.9 bits (128), Expect = 5.6e-08
Identity = 24/52 (46.15%), Postives = 33/52 (63.46%), Query Frame = 1 

Query: 31  RKKDEDDSYEVTLDDDFLTALEYGMPPASGLGIGIDRLVMLLTNSASIRDVI 83
           + +   D   + LD+ F  ALEYG+ P  G G+GIDRL MLLT+S +I++V+
Sbjct: 551 KDRQSGDDEAMALDETFCNALEYGLAPTGGWGLGIDRLSMLLTDSLNIKEVL 602

[Close]
BLAST of Csa4G619050 vs. TAIR10
Match: AT3G30805.1 (AT3G30805.1 Class II aminoacyl-tRNA and biotin synthetases superfamily protein)

HSP 1 Score: 51.2 bits (121), Expect = 3.6e-07
Identity = 26/72 (36.11%), Postives = 38/72 (52.78%), Query Frame = 1 

Query: 8   TWKLNKRFSNNNHQKWKNSVSFNRKKDEDDSYEVTLDDDFLTALEYGMPPASGLGIGIDR 67
           +WK         ++   N      ++  DD   + +D+ F  ALEYG+PP  G G+GIDR
Sbjct: 48  SWKQFGVTPKGGNESCSNQYGCTDRQSGDDE-AMAMDETFCMALEYGLPPTGGWGMGIDR 107

Query: 68  LVMLLTNSASIR 80
            +MLLT+S +I+
Sbjct: 108 PLMLLTDSQNIK 118

[Close]
BLAST of Csa4G619050 vs. NCBI nr
Match: gi|700199833|gb|KGN54991.1| (hypothetical protein Csa_4G619050 [Cucumis sativus])

HSP 1 Score: 174.5 bits (441), Expect = 8.0e-41
Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 1 

Query: 1  MKKRYKLTWKLNKRFSNNNHQKWKNSVSFNRKKDEDDSYEVTLDDDFLTALEYGMPPASG 60
          MKKRYKLTWKLNKRFSNNNHQKWKNSVSFNRKKDEDDSYEVTLDDDFLTALEYGMPPASG
Sbjct: 1  MKKRYKLTWKLNKRFSNNNHQKWKNSVSFNRKKDEDDSYEVTLDDDFLTALEYGMPPASG 60

Query: 61 LGIGIDRLVMLLTNSASIRDVIDT 85
          LGIGIDRLVMLLTNSASIRDVIDT
Sbjct: 61 LGIGIDRLVMLLTNSASIRDVIDT 84

[Close]
BLAST of Csa4G619050 vs. NCBI nr
Match: gi|449463846|ref|XP_004149642.1| (PREDICTED: probable lysine--tRNA ligase, cytoplasmic isoform X1 [Cucumis sativus])

HSP 1 Score: 114.8 bits (286), Expect = 7.5e-23
Identity = 57/58 (98.28%), Postives = 58/58 (100.00%), Query Frame = 1 

Query: 25  NSVSFNRKKDEDDSYEVTLDDDFLTALEYGMPPASGLGIGIDRLVMLLTNSASIRDVI 83
           +SVSFNRKKDEDDSYEVTLDDDFLTALEYGMPPASGLGIGIDRLVMLLTNSASIRDVI
Sbjct: 537 DSVSFNRKKDEDDSYEVTLDDDFLTALEYGMPPASGLGIGIDRLVMLLTNSASIRDVI 594

[Close]
BLAST of Csa4G619050 vs. NCBI nr
Match: gi|778692760|ref|XP_011653520.1| (PREDICTED: probable lysine--tRNA ligase, cytoplasmic isoform X2 [Cucumis sativus])

HSP 1 Score: 114.8 bits (286), Expect = 7.5e-23
Identity = 57/58 (98.28%), Postives = 58/58 (100.00%), Query Frame = 1 

Query: 25  NSVSFNRKKDEDDSYEVTLDDDFLTALEYGMPPASGLGIGIDRLVMLLTNSASIRDVI 83
           +SVSFNRKKDEDDSYEVTLDDDFLTALEYGMPPASGLGIGIDRLVMLLTNSASIRDVI
Sbjct: 514 DSVSFNRKKDEDDSYEVTLDDDFLTALEYGMPPASGLGIGIDRLVMLLTNSASIRDVI 571

[Close]
BLAST of Csa4G619050 vs. NCBI nr
Match: gi|778692763|ref|XP_011653521.1| (PREDICTED: probable lysine--tRNA ligase, cytoplasmic isoform X3 [Cucumis sativus])

HSP 1 Score: 114.8 bits (286), Expect = 7.5e-23
Identity = 57/58 (98.28%), Postives = 58/58 (100.00%), Query Frame = 1 

Query: 25  NSVSFNRKKDEDDSYEVTLDDDFLTALEYGMPPASGLGIGIDRLVMLLTNSASIRDVI 83
           +SVSFNRKKDEDDSYEVTLDDDFLTALEYGMPPASGLGIGIDRLVMLLTNSASIRDVI
Sbjct: 468 DSVSFNRKKDEDDSYEVTLDDDFLTALEYGMPPASGLGIGIDRLVMLLTNSASIRDVI 525

[Close]
BLAST of Csa4G619050 vs. NCBI nr
Match: gi|659097945|ref|XP_008449892.1| (PREDICTED: probable lysine--tRNA ligase, cytoplasmic isoform X2 [Cucumis melo])

HSP 1 Score: 107.8 bits (268), Expect = 9.2e-21
Identity = 53/58 (91.38%), Postives = 56/58 (96.55%), Query Frame = 1 

Query: 25  NSVSFNRKKDEDDSYEVTLDDDFLTALEYGMPPASGLGIGIDRLVMLLTNSASIRDVI 83
           +S+ FNR KDE+DSYEVTLDDDFLTALEYGMPPASGLGIGIDRLVMLLTNSASIRDVI
Sbjct: 514 DSLDFNRTKDENDSYEVTLDDDFLTALEYGMPPASGLGIGIDRLVMLLTNSASIRDVI 571

The following BLAST results are available for this feature:
BLAST of Csa4G619050 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SYKM_ARATH1.1e-1884.62Lysine--tRNA ligase, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=OVA5... [more]
SYK_ANAVT7.1e-1374.51Lysine--tRNA ligase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=lys... [more]
SYK_NOSS17.1e-1374.51Lysine--tRNA ligase OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=lysS PE=3 SV=... [more]
SYK_PELTS7.1e-1369.23Lysine--tRNA ligase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 1... [more]
SYK_GEOSE1.2e-1267.31Lysine--tRNA ligase OS=Geobacillus stearothermophilus GN=lysS PE=1 SV=1[more]
BLAST of Csa4G619050 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L4F7_CUCSA5.6e-41100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G619050 PE=4 SV=1[more]
A0A0A0L1N3_CUCSA5.2e-2398.28Lysine--tRNA ligase OS=Cucumis sativus GN=Csa_4G268050 PE=3 SV=1[more]
V7AP93_PHAVU2.1e-1976.47Lysine--tRNA ligase OS=Phaseolus vulgaris GN=PHAVU_010G046400g PE=3 SV=1[more]
A0A0S3SVH1_PHAAN7.8e-1975.00Lysine--tRNA ligase OS=Vigna angularis var. angularis GN=Vigan.09G016300 PE=3 SV... [more]
A0A0L9VUY7_PHAAN7.8e-1975.00Lysine--tRNA ligase OS=Phaseolus angularis GN=LR48_Vigan11g162800 PE=3 SV=1[more]
BLAST of Csa4G619050 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G13490.16.3e-2084.62 Lysyl-tRNA synthetase, class II[more]
AT3G11710.15.6e-0846.15 lysyl-tRNA synthetase 1[more]
AT3G30805.13.6e-0736.11 Class II aminoacyl-tRNA and biotin synthetases superfamily protein[more]
BLAST of Csa4G619050 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700199833|gb|KGN54991.1|8.0e-41100.00hypothetical protein Csa_4G619050 [Cucumis sativus][more]
gi|449463846|ref|XP_004149642.1|7.5e-2398.28PREDICTED: probable lysine--tRNA ligase, cytoplasmic isoform X1 [Cucumis sativus... [more]
gi|778692760|ref|XP_011653520.1|7.5e-2398.28PREDICTED: probable lysine--tRNA ligase, cytoplasmic isoform X2 [Cucumis sativus... [more]
gi|778692763|ref|XP_011653521.1|7.5e-2398.28PREDICTED: probable lysine--tRNA ligase, cytoplasmic isoform X3 [Cucumis sativus... [more]
gi|659097945|ref|XP_008449892.1|9.2e-2191.38PREDICTED: probable lysine--tRNA ligase, cytoplasmic isoform X2 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004364aa-tRNA-synt_II
IPR018150Aminoacyl-tRNA synthetase, class II (D/K/N)-like
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0004812aminoacyl-tRNA ligase activity
GO:0005524ATP binding
Vocabulary: Biological Process
TermDefinition
GO:0006418tRNA aminoacylation for protein translation
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009658 chloroplast organization
biological_process GO:0006364 rRNA processing
biological_process GO:0006418 tRNA aminoacylation for protein translation
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0010228 vegetative to reproductive phase transition of meristem
biological_process GO:0048481 plant ovule development
biological_process GO:0006430 lysyl-tRNA aminoacylation
biological_process GO:0009085 lysine biosynthetic process
biological_process GO:0016226 iron-sulfur cluster assembly
cellular_component GO:0009507 chloroplast
cellular_component GO:0005739 mitochondrion
molecular_function GO:0005524 ATP binding
molecular_function GO:0004824 lysine-tRNA ligase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004812 aminoacyl-tRNA ligase activity
molecular_function GO:0000166 nucleotide binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa4G619050.1Csa4G619050.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004364Aminoacyl-tRNA synthetase, class II (D/K/N)PFAMPF00152tRNA-synt_2coord: 29..82
score: 1.0
IPR018150Aminoacyl-tRNA synthetase, class II (D/K/N)-likePANTHERPTHR22594ASPARTYL/LYSYL-TRNA SYNTHETASEcoord: 31..82
score: 2.3
NoneNo IPR availableGENE3DG3DSA:3.30.930.10coord: 32..82
score: 5.1
NoneNo IPR availablePANTHERPTHR22594:SF20LYSINE--TRNA LIGASEcoord: 31..82
score: 2.3
NoneNo IPR availableunknownSSF55681Class II aaRS and biotin synthetasescoord: 29..82
score: 2.6

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa4G619050Watermelon (97103) v2cuwmbB279
Csa4G619050Wax gourdcuwgoB419
Csa4G619050Cucumber (Gy14) v1cgycuB042
Csa4G619050Cucumber (Gy14) v1cgycuB043
Csa4G619050Cucurbita maxima (Rimu)cmacuB025
Csa4G619050Cucurbita maxima (Rimu)cmacuB474
Csa4G619050Cucurbita moschata (Rifu)cmocuB016
Csa4G619050Cucurbita moschata (Rifu)cmocuB462
Csa4G619050Melon (DHL92) v3.5.1cumeB273
Csa4G619050Watermelon (Charleston Gray)cuwcgB279
Csa4G619050Watermelon (97103) v1cuwmB349
Csa4G619050Cucurbita pepo (Zucchini)cpecuB565
Csa4G619050Cucurbita pepo (Zucchini)cpecuB786
Csa4G619050Bottle gourd (USVL1VR-Ls)culsiB283
Csa4G619050Bottle gourd (USVL1VR-Ls)culsiB290
Csa4G619050Cucumber (Gy14) v2cgybcuB166
Csa4G619050Melon (DHL92) v3.6.1cumedB304
Csa4G619050Silver-seed gourdcarcuB0339
Csa4G619050Silver-seed gourdcarcuB0657