Csa4G618550 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa4G618550
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUDP-glucosyltransferase
LocationChr4 : 19805863 .. 19806153 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAAATTTGAGTTGGTTTTCATACCAATGCCAGGATCCGGTCACATCATTTCCATGGTCGAGATGGCAAATATTCTCCTCGCTCGAGATCATCGTCTCGCTGTCACAATGATTGCCATTAAGCTATACCCTTGGATCTCAAAGCTAATGAATATATCCAATCACTTTCTGCACAGCCTCGTAATACCAGCAACAGAAACAATACATCCATATACGATTTATTGTTCTTCCTGCATTACCTGCTATACCAAACAATGGGAACCGTTTCTTCCTGGAAATAGTTCTTGA

mRNA sequence

ATGAAGAAATTTGAGTTGGTTTTCATACCAATGCCAGGATCCGGTCACATCATTTCCATGGTCGAGATGGCAAATATTCTCCTCGCTCGAGATCATCGTCTCGCTGTCACAATGATTGCCATTAAGCTATACCCTTGGATCTCAAAGCTAATGAATATATCCAATCACTTTCTGCACAGCCTCGTAATACCAGCAACAGAAACAATACATCCATATACGATTTATTGTTCTTCCTGCATTACCTGCTATACCAAACAATGGGAACCGTTTCTTCCTGGAAATAGTTCTTGA

Coding sequence (CDS)

ATGAAGAAATTTGAGTTGGTTTTCATACCAATGCCAGGATCCGGTCACATCATTTCCATGGTCGAGATGGCAAATATTCTCCTCGCTCGAGATCATCGTCTCGCTGTCACAATGATTGCCATTAAGCTATACCCTTGGATCTCAAAGCTAATGAATATATCCAATCACTTTCTGCACAGCCTCGTAATACCAGCAACAGAAACAATACATCCATATACGATTTATTGTTCTTCCTGCATTACCTGCTATACCAAACAATGGGAACCGTTTCTTCCTGGAAATAGTTCTTGA

Protein sequence

MKKFELVFIPMPGSGHIISMVEMANILLARDHRLAVTMIAIKLYPWISKLMNISNHFLHSLVIPATETIHPYTIYCSSCITCYTKQWEPFLPGNSS*
Homology
[Close]
BLAST of Csa4G618550 vs. Swiss-Prot
Match: U7A16_PYRCO (UDP-glycosyltransferase 71A16 OS=Pyrus communis GN=UGT71A16 PE=1 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 5.6e-06
Identity = 25/57 (43.86%), Postives = 35/57 (61.40%), Query Frame = 1 

Query: 5  ELVFIPMPGSGHIISMVEMANILLARDHRLAVTMIAIKLYPWISKLMNISNHFLHSL 62
          +LVF+P PG GHI+S VEMA  L+ARD +L +T++ +KL P+     N  +   H +
Sbjct: 6  QLVFVPAPGIGHIVSTVEMAKQLVARDDQLFITVLVMKL-PYDQPFTNTDSSISHRI 61

[Close]
BLAST of Csa4G618550 vs. Swiss-Prot
Match: U7A15_MALDO (UDP-glycosyltransferase 71A15 OS=Malus domestica GN=UGT71A15 PE=1 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 5.6e-06
Identity = 25/57 (43.86%), Postives = 34/57 (59.65%), Query Frame = 1 

Query: 5  ELVFIPMPGSGHIISMVEMANILLARDHRLAVTMIAIKLYPWISKLMNISNHFLHSL 62
          +LVF+P PG GHI+S VEMA  L ARD +L +T++ +KL P+     N  +   H +
Sbjct: 6  QLVFVPAPGIGHIVSTVEMAKQLAARDDQLFITVLVMKL-PYAQPFTNTDSSISHRI 61

[Close]
BLAST of Csa4G618550 vs. Swiss-Prot
Match: U71E1_STERE (UDP-glycosyltransferase 71E1 OS=Stevia rebaudiana GN=UGT71E1 PE=2 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 7.3e-06
Identity = 24/44 (54.55%), Postives = 30/44 (68.18%), Query Frame = 1 

Query: 1  MKKFELVFIPMPGSGHIISMVEMANILLARDHRLAVTMIAIKLY 45
          M   ELVFIP PG+GH+   VE+A +LL RD RL+VT+I + L+
Sbjct: 1  MSTSELVFIPSPGAGHLPPTVELAKLLLHRDQRLSVTIIVMNLW 44

[Close]
BLAST of Csa4G618550 vs. Swiss-Prot
Match: U71K2_PYRCO (UDP-glycosyltransferase 71K2 OS=Pyrus communis GN=UGT71K2 PE=1 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 9.5e-06
Identity = 21/44 (47.73%), Postives = 32/44 (72.73%), Query Frame = 1 

Query: 1  MKKFELVFIPMPGSGHIISMVEMANILLARDHRLAVTMIAIKLY 45
          MKK ELVFIP PG+GH++  ++ A  L+ R+ R+++T++AI+ Y
Sbjct: 1  MKKVELVFIPSPGAGHLVPTLQFAKRLIDRNDRISITILAIQSY 44

[Close]
BLAST of Csa4G618550 vs. TrEMBL
Match: A0A0A0KZA7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G618550 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 2.2e-49
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 1 

Query: 1  MKKFELVFIPMPGSGHIISMVEMANILLARDHRLAVTMIAIKLYPWISKLMNISNHFLHS 60
          MKKFELVFIPMPGSGHIISMVEMANILLARDHRLAVTMIAIKLYPWISKLMNISNHFLHS
Sbjct: 1  MKKFELVFIPMPGSGHIISMVEMANILLARDHRLAVTMIAIKLYPWISKLMNISNHFLHS 60

Query: 61 LVIPATETIHPYTIYCSSCITCYTKQWEPFLPGNSS 97
          LVIPATETIHPYTIYCSSCITCYTKQWEPFLPGNSS
Sbjct: 61 LVIPATETIHPYTIYCSSCITCYTKQWEPFLPGNSS 96

[Close]
BLAST of Csa4G618550 vs. TrEMBL
Match: A0A0A0L341_CUCSA (Glycosyltransferase OS=Cucumis sativus GN=Csa_4G620550 PE=3 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 6.2e-12
Identity = 38/43 (88.37%), Postives = 40/43 (93.02%), Query Frame = 1 

Query: 1  MKKFELVFIPMPGSGHIISMVEMANILLARDHRLAVTMIAIKL 44
          MKKFELVFIP+PGSGH+ SMVEMAN LLARDHRLAVTMIA KL
Sbjct: 1  MKKFELVFIPIPGSGHLASMVEMANTLLARDHRLAVTMIAFKL 43

[Close]
BLAST of Csa4G618550 vs. TrEMBL
Match: K7NBW4_SIRGR (Glycosyltransferase OS=Siraitia grosvenorii GN=UDPG7 PE=2 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 9.3e-08
Identity = 30/43 (69.77%), Postives = 36/43 (83.72%), Query Frame = 1 

Query: 1  MKKFELVFIPMPGSGHIISMVEMANILLARDHRLAVTMIAIKL 44
          MKKFELVFIP+P  GH+ +MVEMANIL+ RD RL VT++ IKL
Sbjct: 1  MKKFELVFIPLPVMGHLAAMVEMANILVTRDQRLTVTILVIKL 43

[Close]
BLAST of Csa4G618550 vs. TrEMBL
Match: A0A0A0L321_CUCSA (Glycosyltransferase OS=Cucumis sativus GN=Csa_4G618520 PE=3 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 2.7e-07
Identity = 29/43 (67.44%), Postives = 37/43 (86.05%), Query Frame = 1 

Query: 1  MKKFELVFIPMPGSGHIISMVEMANILLARDHRLAVTMIAIKL 44
          M KFELVFIP PG GH+ S VE+AN+L++RD RL+VT++AIKL
Sbjct: 1  MNKFELVFIPGPGIGHLASTVELANVLVSRDDRLSVTVLAIKL 43

[Close]
BLAST of Csa4G618550 vs. TrEMBL
Match: A0A0A0L1T2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G618540 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 2.7e-07
Identity = 27/40 (67.50%), Postives = 35/40 (87.50%), Query Frame = 1 

Query: 4  FELVFIPMPGSGHIISMVEMANILLARDHRLAVTMIAIKL 44
          FEL+FIP PG GH+ S VEMAN+L+ RDHRL+VT++A+KL
Sbjct: 2  FELIFIPAPGIGHLASTVEMANVLVTRDHRLSVTLLAMKL 41

[Close]
BLAST of Csa4G618550 vs. TAIR10
Match: AT3G21790.1 (AT3G21790.1 UDP-Glycosyltransferase superfamily protein)

HSP 1 Score: 50.4 bits (119), Expect = 7.0e-07
Identity = 34/82 (41.46%), Postives = 46/82 (56.10%), Query Frame = 1 

Query: 3  KFELVFIPMPGSGHIISMVEMANILLARDHRLAVTMIAIKLY--------PWISKLMNIS 62
          KFELVFIP PG GH+ S VEMA +L+ R+ RL++++I +            +I+ L   S
Sbjct: 2  KFELVFIPYPGIGHLRSTVEMAKLLVDRETRLSISVIILPFISEGEVGASDYIAALSASS 61

Query: 63 NHFLHSLVIPATE--TIHPYTI 75
          N+ L   VI A +  TI   TI
Sbjct: 62 NNRLRYEVISAVDQPTIEMTTI 83

[Close]
BLAST of Csa4G618550 vs. NCBI nr
Match: gi|700199832|gb|KGN54990.1| (hypothetical protein Csa_4G618550 [Cucumis sativus])

HSP 1 Score: 202.6 bits (514), Expect = 3.1e-49
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 1 

Query: 1  MKKFELVFIPMPGSGHIISMVEMANILLARDHRLAVTMIAIKLYPWISKLMNISNHFLHS 60
          MKKFELVFIPMPGSGHIISMVEMANILLARDHRLAVTMIAIKLYPWISKLMNISNHFLHS
Sbjct: 1  MKKFELVFIPMPGSGHIISMVEMANILLARDHRLAVTMIAIKLYPWISKLMNISNHFLHS 60

Query: 61 LVIPATETIHPYTIYCSSCITCYTKQWEPFLPGNSS 97
          LVIPATETIHPYTIYCSSCITCYTKQWEPFLPGNSS
Sbjct: 61 LVIPATETIHPYTIYCSSCITCYTKQWEPFLPGNSS 96

[Close]
BLAST of Csa4G618550 vs. NCBI nr
Match: gi|449456659|ref|XP_004146066.1| (PREDICTED: anthocyanidin 3-O-glucosyltransferase 2 [Cucumis sativus])

HSP 1 Score: 78.2 bits (191), Expect = 8.9e-12
Identity = 38/43 (88.37%), Postives = 40/43 (93.02%), Query Frame = 1 

Query: 1  MKKFELVFIPMPGSGHIISMVEMANILLARDHRLAVTMIAIKL 44
          MKKFELVFIP+PGSGH+ SMVEMAN LLARDHRLAVTMIA KL
Sbjct: 1  MKKFELVFIPIPGSGHLASMVEMANTLLARDHRLAVTMIAFKL 43

[Close]
BLAST of Csa4G618550 vs. NCBI nr
Match: gi|659129340|ref|XP_008464637.1| (PREDICTED: anthocyanidin 3-O-glucosyltransferase 2-like [Cucumis melo])

HSP 1 Score: 77.8 bits (190), Expect = 1.2e-11
Identity = 43/61 (70.49%), Postives = 49/61 (80.33%), Query Frame = 1 

Query: 1  MKKFELVFIPMPGSGHIISMVEMANILLARDHRLAVTMIAIKLYPWISKLMNISNHFLHS 60
          MKKFELVFIP+PGSGH+ SM EMAN LLARDHRLAVTMIAIKL P  +K+    N ++ S
Sbjct: 1  MKKFELVFIPIPGSGHLASMFEMANSLLARDHRLAVTMIAIKL-PLDAKV----NEYIQS 56

Query: 61 L 62
          L
Sbjct: 61 L 56

[Close]
BLAST of Csa4G618550 vs. NCBI nr
Match: gi|343466221|gb|AEM43004.1| (UDP-glucosyltransferase [Siraitia grosvenorii])

HSP 1 Score: 64.3 bits (155), Expect = 1.3e-07
Identity = 30/43 (69.77%), Postives = 36/43 (83.72%), Query Frame = 1 

Query: 1  MKKFELVFIPMPGSGHIISMVEMANILLARDHRLAVTMIAIKL 44
          MKKFELVFIP+P  GH+ +MVEMANIL+ RD RL VT++ IKL
Sbjct: 1  MKKFELVFIPLPVMGHLAAMVEMANILVTRDQRLTVTILVIKL 43

[Close]
BLAST of Csa4G618550 vs. NCBI nr
Match: gi|700199831|gb|KGN54989.1| (hypothetical protein Csa_4G618540 [Cucumis sativus])

HSP 1 Score: 62.8 bits (151), Expect = 3.9e-07
Identity = 27/40 (67.50%), Postives = 35/40 (87.50%), Query Frame = 1 

Query: 4  FELVFIPMPGSGHIISMVEMANILLARDHRLAVTMIAIKL 44
          FEL+FIP PG GH+ S VEMAN+L+ RDHRL+VT++A+KL
Sbjct: 2  FELIFIPAPGIGHLASTVEMANVLVTRDHRLSVTLLAMKL 41

The following BLAST results are available for this feature:
BLAST of Csa4G618550 vs. Swiss-Prot
Match NameE-valueIdentityDescription
U7A16_PYRCO5.6e-0643.86UDP-glycosyltransferase 71A16 OS=Pyrus communis GN=UGT71A16 PE=1 SV=1[more]
U7A15_MALDO5.6e-0643.86UDP-glycosyltransferase 71A15 OS=Malus domestica GN=UGT71A15 PE=1 SV=1[more]
U71E1_STERE7.3e-0654.55UDP-glycosyltransferase 71E1 OS=Stevia rebaudiana GN=UGT71E1 PE=2 SV=1[more]
U71K2_PYRCO9.5e-0647.73UDP-glycosyltransferase 71K2 OS=Pyrus communis GN=UGT71K2 PE=1 SV=1[more]
BLAST of Csa4G618550 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KZA7_CUCSA2.2e-49100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G618550 PE=4 SV=1[more]
A0A0A0L341_CUCSA6.2e-1288.37Glycosyltransferase OS=Cucumis sativus GN=Csa_4G620550 PE=3 SV=1[more]
K7NBW4_SIRGR9.3e-0869.77Glycosyltransferase OS=Siraitia grosvenorii GN=UDPG7 PE=2 SV=1[more]
A0A0A0L321_CUCSA2.7e-0767.44Glycosyltransferase OS=Cucumis sativus GN=Csa_4G618520 PE=3 SV=1[more]
A0A0A0L1T2_CUCSA2.7e-0767.50Uncharacterized protein OS=Cucumis sativus GN=Csa_4G618540 PE=4 SV=1[more]
BLAST of Csa4G618550 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G21790.17.0e-0741.46 UDP-Glycosyltransferase superfamily protein[more]
BLAST of Csa4G618550 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700199832|gb|KGN54990.1|3.1e-49100.00hypothetical protein Csa_4G618550 [Cucumis sativus][more]
gi|449456659|ref|XP_004146066.1|8.9e-1288.37PREDICTED: anthocyanidin 3-O-glucosyltransferase 2 [Cucumis sativus][more]
gi|659129340|ref|XP_008464637.1|1.2e-1170.49PREDICTED: anthocyanidin 3-O-glucosyltransferase 2-like [Cucumis melo][more]
gi|343466221|gb|AEM43004.1|1.3e-0769.77UDP-glucosyltransferase [Siraitia grosvenorii][more]
gi|700199831|gb|KGN54989.1|3.9e-0767.50hypothetical protein Csa_4G618540 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002213UDP_glucos_trans
Vocabulary: Molecular Function
TermDefinition
GO:0016758transferase activity, transferring hexosyl groups
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0016758 transferase activity, transferring hexosyl groups
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa4G618550.1Csa4G618550.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002213UDP-glucuronosyl/UDP-glucosyltransferasePANTHERPTHR11926GLUCOSYL/GLUCURONOSYL TRANSFERASEScoord: 1..42
score: 5.1
NoneNo IPR availablePANTHERPTHR11926:SF242UDP-GLYCOSYLTRANSFERASE 71B2-RELATEDcoord: 1..42
score: 5.1
NoneNo IPR availableunknownSSF53756UDP-Glycosyltransferase/glycogen phosphorylasecoord: 2..72
score: 1.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa4G618550Cla023274Watermelon (97103) v1cuwmB349
Csa4G618550Lsi04G019330Bottle gourd (USVL1VR-Ls)culsiB283
Csa4G618550Cla97C11G222850Watermelon (97103) v2cuwmbB279
Csa4G618550Cucsa.058350Cucumber (Gy14) v1cgycuB042
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa4G618550Wax gourdcuwgoB419
Csa4G618550Cucumber (Gy14) v1cgycuB043
Csa4G618550Cucurbita maxima (Rimu)cmacuB025
Csa4G618550Cucurbita maxima (Rimu)cmacuB474
Csa4G618550Cucurbita moschata (Rifu)cmocuB016
Csa4G618550Cucurbita moschata (Rifu)cmocuB462
Csa4G618550Melon (DHL92) v3.5.1cumeB273
Csa4G618550Watermelon (Charleston Gray)cuwcgB279
Csa4G618550Cucurbita pepo (Zucchini)cpecuB565
Csa4G618550Cucurbita pepo (Zucchini)cpecuB786
Csa4G618550Bottle gourd (USVL1VR-Ls)culsiB290
Csa4G618550Cucumber (Gy14) v2cgybcuB166
Csa4G618550Melon (DHL92) v3.6.1cumedB304
Csa4G618550Silver-seed gourdcarcuB0339
Csa4G618550Silver-seed gourdcarcuB0657