Csa4G618480 (gene) Cucumber (Chinese Long) v2

NameCsa4G618480
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr4 : 19773394 .. 19773741 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGGATACGGCGAAATCACCATTATCTAAATCTATGGTAAGTTGAATGTTTTGATGGTTGATTTTTTTTGTGTCAAATTAATGTGAATTTTAGTTGGTGCTGGAATTAGATGTGTATTAGTTGGAAATAGATATTTTAGTTGGTATAAATTTGTTTGTATTGTAAGTTTAAATGGAAATTTAATTAGATGTTAATTAGACGTTGGTTTCCTTTATTTTATAGATGGATAGCGAGAATGCGAGTGCTACTGGTAATAACAATATGCCTCTTCCCCTTCCTCATTCTCCTCCTCAAACTACATACTGTATCATCTCTACCTCCCAAGTCCAAAAGAAAGAGACCTAA

mRNA sequence

ATGTCGGATACGGCGAAATCACCATTATCTAAATCTATGATGGATAGCGAGAATGCGAGTGCTACTGGTAATAACAATATGCCTCTTCCCCTTCCTCATTCTCCTCCTCAAACTACATACTGTATCATCTCTACCTCCCAAGTCCAAAAGAAAGAGACCTAA

Coding sequence (CDS)

ATGTCGGATACGGCGAAATCACCATTATCTAAATCTATGATGGATAGCGAGAATGCGAGTGCTACTGGTAATAACAATATGCCTCTTCCCCTTCCTCATTCTCCTCCTCAAACTACATACTGTATCATCTCTACCTCCCAAGTCCAAAAGAAAGAGACCTAA

Protein sequence

MSDTAKSPLSKSMMDSENASATGNNNMPLPLPHSPPQTTYCIISTSQVQKKET*
BLAST of Csa4G618480 vs. TrEMBL
Match: A0A0A0KZV0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G618480 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 6.3e-22
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 1

Query: 1  MSDTAKSPLSKSMMDSENASATGNNNMPLPLPHSPPQTTYCIISTSQVQKKET 54
          MSDTAKSPLSKSMMDSENASATGNNNMPLPLPHSPPQTTYCIISTSQVQKKET
Sbjct: 1  MSDTAKSPLSKSMMDSENASATGNNNMPLPLPHSPPQTTYCIISTSQVQKKET 53

BLAST of Csa4G618480 vs. NCBI nr
Match: gi|700199825|gb|KGN54983.1| (hypothetical protein Csa_4G618480 [Cucumis sativus])

HSP 1 Score: 110.5 bits (275), Expect = 9.0e-22
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 1

Query: 1  MSDTAKSPLSKSMMDSENASATGNNNMPLPLPHSPPQTTYCIISTSQVQKKET 54
          MSDTAKSPLSKSMMDSENASATGNNNMPLPLPHSPPQTTYCIISTSQVQKKET
Sbjct: 1  MSDTAKSPLSKSMMDSENASATGNNNMPLPLPHSPPQTTYCIISTSQVQKKET 53

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KZV0_CUCSA6.3e-22100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G618480 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700199825|gb|KGN54983.1|9.0e-22100.00hypothetical protein Csa_4G618480 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU129283cucumber EST collection version 3.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa4G618480.1Csa4G618480.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU129283CU129283transcribed_cluster


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None