Csa4G608050 (gene) Cucumber (Chinese Long) v2

NameCsa4G608050
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr4 : 19332663 .. 19333455 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGGGAAGAAAACGGCGCAAAGTTCTTGGTCAATTTGACTCTCTCAACTCCCAATTCTCCTCCAACTCCTTTTCTCATCCTCTCCCTTCATTTTCTTTTTCTTTTTCTTTTTCTTTTTCTTTTTCTTTTTCTTTCGCTAATCTTCCTCTAAACCCTCTTAAATTTCCCATCAGCTCGATTTCCGTTCTTCCGCTCAGTTGCTGTCAAGAACGTCAGGCAAACACCTCGCTCCAGCGATTTAGGACGGAAATTTCGTTGTTTTCAGGTCTGTTTTTAAGTTACTCAATATTTGGCCATGGATTTAGGGCTTTGAATTTTATCCAGACCCGACCTTTTGGATGTTGCTCTAATCGATGGGTTTTGTTCGGTTTTACATTTTACAATCGGTTATCTTCTGTTTGGTCGCGTGACTTGGGGATCATACTGTTATTTGCCTCGTGTTGATTCTGCAAAAGTTTTTAGTTGTTAGTGATAGATGAAATGAAGCATGAGTAGAGATTTGTTTGAGTTGGGTATGATAAAATATATGTTTGTTACTAATATTGATTATTCTTTTCGTATGTTTAGTTGACTTTTAAATTCCAGGTTTTAAGATATATATTAAACCGCACTGTAGTACATAACTCCATGAATTGGTATTTGTTTTTGCCCTCACTGATTGGGCTTTTCGCGTGTTCTTGTATGTAGATTGAGCTAAGTTGCTTGAATTTGAGGTATTTGGCCGTTGAAAGCATTTCATTTCATGGCAGGCAATGGCCTGCCATCATTGGGTCGTGTGAAACTTACTGA

mRNA sequence

ATGAAAGGGAAGAAAACGGCGCAAACTCGATTTCCGTTCTTCCGCTCAGTTGCTGTCAAGAACGTCAGGCAAACACCTCGCTCCAGCGATTTAGGACGGAAATTTCGTTGTTTTCAGATTGAGCTAAGTTGCTTGAATTTGAGGTATTTGGCCGTTGAAAGCATTTCATTTCATGGCAGGCAATGGCCTGCCATCATTGGGTCGTGTGAAACTTACTGA

Coding sequence (CDS)

ATGAAAGGGAAGAAAACGGCGCAAACTCGATTTCCGTTCTTCCGCTCAGTTGCTGTCAAGAACGTCAGGCAAACACCTCGCTCCAGCGATTTAGGACGGAAATTTCGTTGTTTTCAGATTGAGCTAAGTTGCTTGAATTTGAGGTATTTGGCCGTTGAAAGCATTTCATTTCATGGCAGGCAATGGCCTGCCATCATTGGGTCGTGTGAAACTTACTGA

Protein sequence

MKGKKTAQTRFPFFRSVAVKNVRQTPRSSDLGRKFRCFQIELSCLNLRYLAVESISFHGRQWPAIIGSCETY*
BLAST of Csa4G608050 vs. TrEMBL
Match: A0A0A0L1K3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G608050 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 5.7e-34
Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 1

Query: 1  MKGKKTAQTRFPFFRSVAVKNVRQTPRSSDLGRKFRCFQIELSCLNLRYLAVESISFHGR 60
          MKGKKTAQTRFPFFRSVAVKNVRQTPRSSDLGRKFRCFQIELSCLNLRYLAVESISFHGR
Sbjct: 1  MKGKKTAQTRFPFFRSVAVKNVRQTPRSSDLGRKFRCFQIELSCLNLRYLAVESISFHGR 60

Query: 61 QWPAIIGSCETY 73
          QWPAIIGSCETY
Sbjct: 61 QWPAIIGSCETY 72

BLAST of Csa4G608050 vs. NCBI nr
Match: gi|700199771|gb|KGN54929.1| (hypothetical protein Csa_4G608050 [Cucumis sativus])

HSP 1 Score: 151.0 bits (380), Expect = 8.1e-34
Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 1

Query: 1  MKGKKTAQTRFPFFRSVAVKNVRQTPRSSDLGRKFRCFQIELSCLNLRYLAVESISFHGR 60
          MKGKKTAQTRFPFFRSVAVKNVRQTPRSSDLGRKFRCFQIELSCLNLRYLAVESISFHGR
Sbjct: 1  MKGKKTAQTRFPFFRSVAVKNVRQTPRSSDLGRKFRCFQIELSCLNLRYLAVESISFHGR 60

Query: 61 QWPAIIGSCETY 73
          QWPAIIGSCETY
Sbjct: 61 QWPAIIGSCETY 72

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0L1K3_CUCSA5.7e-34100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G608050 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700199771|gb|KGN54929.1|8.1e-34100.00hypothetical protein Csa_4G608050 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU169287cucumber EST collection version 3.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa4G608050.1Csa4G608050.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU169287CU169287transcribed_cluster


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None